From 6efa5d80de08e9b3a2fc4d44841dbec7b625b6cf Mon Sep 17 00:00:00 2001 From: Iain Lane Date: Fri, 4 Sep 2020 12:39:42 +0100 Subject: [PATCH] run-unit-test: Pass -blastdb_version 4 to fix tests on 32 bit --- debian/tests/run-unit-test | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/debian/tests/run-unit-test b/debian/tests/run-unit-test index 7e48969b..4347372e 100644 --- a/debian/tests/run-unit-test +++ b/debian/tests/run-unit-test @@ -14,7 +14,7 @@ cd $AUTOPKGTEST_TMP find . -name "*.gz" -exec gunzip \{\} \; echo '---Creating Database--' -/usr/bin/makeblastdb -in testdatabase.fa -parse_seqids -dbtype nucl -out testdb +/usr/bin/makeblastdb -blastdb_version 4 -in testdatabase.fa -parse_seqids -dbtype nucl -out testdb echo '---Searching Database for Hits---' /usr/bin/blastn -query test.fa -db testdb -task blastn -dust no -outfmt "7 qseqid sseqid evalue bitscore" -max_target_seqs 2 echo '---Search and Fetch An Entry From Database---' -- 2.30.2