From 3191ea44ef9ae6a43caeb168bf23312ffaae208f Mon Sep 17 00:00:00 2001 From: yarikoptic Date: Wed, 17 Nov 2021 21:03:29 +0000 Subject: [PATCH] Added a comment: god bless search --- ..._02c5903bf4de4b94e6db84bc43b3b3d8._comment | 27 +++++++++++++++++++ 1 file changed, 27 insertions(+) create mode 100644 doc/forum/git-annex_causing_zombie_git_processes_to_build_up/comment_8_02c5903bf4de4b94e6db84bc43b3b3d8._comment diff --git a/doc/forum/git-annex_causing_zombie_git_processes_to_build_up/comment_8_02c5903bf4de4b94e6db84bc43b3b3d8._comment b/doc/forum/git-annex_causing_zombie_git_processes_to_build_up/comment_8_02c5903bf4de4b94e6db84bc43b3b3d8._comment new file mode 100644 index 0000000000..3d1d25abfa --- /dev/null +++ b/doc/forum/git-annex_causing_zombie_git_processes_to_build_up/comment_8_02c5903bf4de4b94e6db84bc43b3b3d8._comment @@ -0,0 +1,27 @@ +[[!comment format=mdwn + username="yarikoptic" + avatar="http://cdn.libravatar.org/avatar/f11e9c84cb18d26a1748c33b48c924b4" + subject="god bless search" + date="2021-11-17T21:03:29Z" + content=""" +found this issue which was not `done`. + +I have ran into it again: on initial occasion I could not even ssh to that host because ~4000 `[git] ` processes forbid any other process to start according to the policy. +Updated git-annex to standalone build from conda (8.20211012-geb95ed486), repeated again (on http://datasets.datalad.org/labs/hasson/narratives/derivatives/fmriprep/.git +) with a plain `git annex get -J5 .` -- had to interrupt it when I saw that reached 1k of those. Here is dump of annexy config variables so - no retries + +``` +(datalad) [d31548v@discovery7 fmriprep]$ git config --list | grep annex +annex.pidlock=true +remote.origin.annex-bare=false +remote.origin.annex-uuid=348d8bd8-1142-4de1-b52e-6b9899faa1d5 +annex.uuid=75d12ed4-e3e4-4ad0-ba7e-ec11538966d2 +annex.version=8 +filter.annex.smudge=git-annex smudge -- %f +filter.annex.clean=git-annex smudge --clean -- %f +remote.fcp-indi.annex-s3=true +remote.fcp-indi.annex-uuid=bf6f56f3-f6b7-4df8-9898-a4226dc71400 +``` + +I wish Nick_P has shared the script -- I could try to bisect... otherwise someone needs to write one ;-) +"""]] -- 2.30.2