openmpi.git
4 years agoMerge openmpi (4.1.1-5) import into refs/heads/workingbranch
Alastair McKinstry [Wed, 8 Sep 2021 13:07:52 +0000 (14:07 +0100)]
Merge openmpi (4.1.1-5) import into refs/heads/workingbranch

4 years agoWorkaround for issue running on remote host
Alastair McKinstry [Wed, 8 Sep 2021 13:07:52 +0000 (14:07 +0100)]
Workaround for issue running on remote host

Last-Updated: 2021-05-13
Forwarded: not-needed

Gbp-Pq: Name pr8596.patch

4 years agoDon't ship lib
Alastair McKinstry [Wed, 8 Sep 2021 13:07:52 +0000 (14:07 +0100)]
Don't ship lib

Bug-Origin: https://github.com/open-mpi/ompi/pull/8892/commits/952328c3827b9d9b0b54d0a0a068d494bfef1974
Last-Updated: 2021-09-02
Forwarded: not-needed

The orted-mpir library was split to avoid global CFLAGS, which might
optimize out MPIR functionality. The library has been made a `noinst`
libtool convenience library to prevent its installation or appearance as
a  dependency of other libraries.

Gbp-Pq: Name no-ship-orted-mpir.patch

4 years agoia64
Alastair McKinstry [Wed, 8 Sep 2021 13:07:52 +0000 (14:07 +0100)]
ia64

===================================================================

Gbp-Pq: Name ia64.patch

4 years agoTurn off warning that openfabric is not available
Alastair McKinstry [Wed, 8 Sep 2021 13:07:52 +0000 (14:07 +0100)]
Turn off warning that openfabric is not available

Last-Updated: 2021-09-02
Forwarded: not-needed

because it breaks some overlying layers/appications in Debian.
Also exclude openfabric/openib by default.
See: #979041

Gbp-Pq: Name no-warning-unused.patch

4 years agofix-underlinking
Graham Inggs [Wed, 8 Sep 2021 13:07:52 +0000 (14:07 +0100)]
fix-underlinking

Desciption: Fix underlinking
  Prevents symbol lookup error: ../openmpi4/mca_mtl_ofi.so:
  undefined symbol: fi_dupinfo when linked with --as-needed
Bug-Debian: https://bugs.debian.org/899104
Last-Update: 2018-05-23

Gbp-Pq: Name fix-underlinking.patch

4 years agoMakefile.ompi-rules: don't set silent building
Adrian Bunk [Wed, 8 Sep 2021 13:07:52 +0000 (14:07 +0100)]
Makefile.ompi-rules: don't set silent building

Gbp-Pq: Name verbose-ompi-rules.patch

4 years agofix test-suite to build on ppc64el
Thibaut Paumard [Wed, 8 Sep 2021 13:07:52 +0000 (14:07 +0100)]
fix test-suite to build on ppc64el

Origin: Vendor
Bug-Debian: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=848218
Forwarded: no
Last-Update: 2016-12-15

Test suite hangs on ppc64el. This is due to a bug in test/class/opal_fifo.c.
thread_test() must end with pthread_exit(NULL), not return NULL.
Last-Update: 2016-12-15
Gbp-Pq: Name opal_fifo.patch

4 years agoSupport for the HPPA architecture
Helge Deller [Wed, 8 Sep 2021 13:07:52 +0000 (14:07 +0100)]
Support for the HPPA architecture

Bug-Origin: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=776730
Last-Updated: 2016-09-04
Forwarded: no

Gbp-Pq: Name hppa.patch

4 years agoChange install libdir to openmpi3
Alastair McKinstry [Wed, 8 Sep 2021 13:07:52 +0000 (14:07 +0100)]
Change install libdir to openmpi3

Last-Updated: 2019-03-09
Forwarded: no

This is needed to ensure that libopenmpi2, libopenmpi3 do not collide.

Gbp-Pq: Name libdir.patch

4 years agoFix build problems on hurd-i386
Pino Toscano [Wed, 8 Sep 2021 13:07:52 +0000 (14:07 +0100)]
Fix build problems on hurd-i386

Forwarded: partially
Last-Update: 2018-10-24

This patch allows Open MPI to build on Debian GNU/HURD.

Also, the memory:linux MCA component is disabled, since its use of POSIX API
in malloc hooks called very early at startup causes troubles.

Also changes by Samuel Thibault <sthibault@debian.org>
See bugs.debian.org/846965

Gbp-Pq: Name build_hurd

4 years agoFix problems in manpages
Alastair McKinstry [Wed, 8 Sep 2021 13:07:52 +0000 (14:07 +0100)]
Fix problems in manpages

Forwarded: no
Last-Update: 2018-04-08

In some man page headers, a macro (-*-) is used which makes lintian
 choke and probably should not be there anyway.

Gbp-Pq: Name manpage_macros

4 years agompifort
Alastair McKinstry [Wed, 8 Sep 2021 13:07:52 +0000 (14:07 +0100)]
mpifort

===================================================================

Gbp-Pq: Name mpifort.patch

4 years agoEnable non-gfortran compilation
Alastair McKinstry [Wed, 8 Sep 2021 13:07:52 +0000 (14:07 +0100)]
Enable non-gfortran compilation

Last-Updated: 2020-01-13
Forwarded: no

Gbp-Pq: Name pkg-config.patch

4 years agoMemory leak in MPI_Allreduce when using a repeatedly created and freed MPI_Datatype
Alastair McKinstry [Wed, 8 Sep 2021 13:07:52 +0000 (14:07 +0100)]
Memory leak in MPI_Allreduce when using a repeatedly created and freed MPI_Datatype

Bug-Origin: https://github.com/open-mpi/ompi/issues/8827
Last-Updated: 2021-05-10
Forwarded: not-needed

Gbp-Pq: Name pr8827.patch

4 years agoopenmpi (4.1.1-5) unstable; urgency=medium
Alastair McKinstry [Wed, 8 Sep 2021 13:07:52 +0000 (14:07 +0100)]
openmpi (4.1.1-5) unstable; urgency=medium

  * Include pr8596.patch from 4.1.0-9 in 4.1.1

[dgit import unpatched openmpi 4.1.1-5]

4 years agoImport openmpi_4.1.1-5.debian.tar.xz
Alastair McKinstry [Wed, 8 Sep 2021 13:07:52 +0000 (14:07 +0100)]
Import openmpi_4.1.1-5.debian.tar.xz

[dgit import tarball openmpi 4.1.1-5 openmpi_4.1.1-5.debian.tar.xz]

4 years agoMerge openmpi (4.1.0-10) import into refs/heads/workingbranch
Alastair McKinstry [Thu, 27 May 2021 08:16:24 +0000 (09:16 +0100)]
Merge openmpi (4.1.0-10) import into refs/heads/workingbranch

4 years agoWorkaround for issue running on remote host
Alastair McKinstry [Thu, 27 May 2021 08:16:24 +0000 (09:16 +0100)]
Workaround for issue running on remote host

Last-Updated: 2021-05-13
Forwarded: not-needed

Gbp-Pq: Name pr8596.patch

4 years agoBackport of grequest fix
Alastair McKinstry [Thu, 27 May 2021 08:16:24 +0000 (09:16 +0100)]
Backport of grequest fix

Bug-Origin:  https://github.com/open-mpi/ompi/pull/8347
Bug-Debian: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=979480
Forwarded: not-needed
Last-Updated: 2021-01-20

Gbp-Pq: Name grequest-fix.patch

4 years agoFix external PMIx v4.x check
Alastair McKinstry [Thu, 27 May 2021 08:16:24 +0000 (09:16 +0100)]
Fix external PMIx v4.x check

Bug-Origin: https://github.com/open-mpi/ompi/pull/8337
Last-Updated: 2021-01-09
Forwarded: not-needed

Gbp-Pq: Name external-pmix-fix.patch

4 years agoInclude missing plugin mca_op_avx.so
Alastair McKinstry [Thu, 27 May 2021 08:16:24 +0000 (09:16 +0100)]
Include missing plugin mca_op_avx.so

Bug-Origin: https://github.com/open-mpi/ompi/issues/8323
Last-Updated: 2021-01-02
Forwarded: not-needed

Gbp-Pq: Name missing-symbol.patch

4 years agoia64
Alastair McKinstry [Thu, 27 May 2021 08:16:24 +0000 (09:16 +0100)]
ia64

===================================================================

Gbp-Pq: Name ia64.patch

4 years agoTurn off warning that openfabric is not available
Alastair McKinstry [Thu, 27 May 2021 08:16:24 +0000 (09:16 +0100)]
Turn off warning that openfabric is not available

Last-Updated: 2021-01-21
Forwarded: not-needed

because it breaks some overlying layers/appications in Debian.
Also exclude openfabric/openib by default.

Gbp-Pq: Name no-warning-unused.patch

4 years agofix-underlinking
Graham Inggs [Thu, 27 May 2021 08:16:24 +0000 (09:16 +0100)]
fix-underlinking

Desciption: Fix underlinking
  Prevents symbol lookup error: ../openmpi4/mca_mtl_ofi.so:
  undefined symbol: fi_dupinfo when linked with --as-needed
Bug-Debian: https://bugs.debian.org/899104
Last-Update: 2018-05-23

Gbp-Pq: Name fix-underlinking.patch

4 years agoMakefile.ompi-rules: don't set silent building
Adrian Bunk [Thu, 27 May 2021 08:16:24 +0000 (09:16 +0100)]
Makefile.ompi-rules: don't set silent building

Gbp-Pq: Name verbose-ompi-rules.patch

4 years agofix test-suite to build on ppc64el
Thibaut Paumard [Thu, 27 May 2021 08:16:24 +0000 (09:16 +0100)]
fix test-suite to build on ppc64el

Origin: Vendor
Bug-Debian: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=848218
Forwarded: no
Last-Update: 2016-12-15

Test suite hangs on ppc64el. This is due to a bug in test/class/opal_fifo.c.
thread_test() must end with pthread_exit(NULL), not return NULL.
Last-Update: 2016-12-15
Gbp-Pq: Name opal_fifo.patch

4 years agoSupport for the HPPA architecture
Helge Deller [Thu, 27 May 2021 08:16:24 +0000 (09:16 +0100)]
Support for the HPPA architecture

Bug-Origin: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=776730
Last-Updated: 2016-09-04
Forwarded: no

Gbp-Pq: Name hppa.patch

4 years agoChange install libdir to openmpi3
Alastair McKinstry [Thu, 27 May 2021 08:16:24 +0000 (09:16 +0100)]
Change install libdir to openmpi3

Last-Updated: 2019-03-09
Forwarded: no

This is needed to ensure that libopenmpi2, libopenmpi3 do not collide.

Gbp-Pq: Name libdir.patch

4 years agoFix build problems on hurd-i386
Pino Toscano [Thu, 27 May 2021 08:16:24 +0000 (09:16 +0100)]
Fix build problems on hurd-i386

Forwarded: partially
Last-Update: 2018-10-24

This patch allows Open MPI to build on Debian GNU/HURD.

Also, the memory:linux MCA component is disabled, since its use of POSIX API
in malloc hooks called very early at startup causes troubles.

Also changes by Samuel Thibault <sthibault@debian.org>
See bugs.debian.org/846965

Gbp-Pq: Name build_hurd

4 years agoFix problems in manpages
Alastair McKinstry [Thu, 27 May 2021 08:16:24 +0000 (09:16 +0100)]
Fix problems in manpages

Forwarded: no
Last-Update: 2018-04-08

In some man page headers, a macro (-*-) is used which makes lintian
 choke and probably should not be there anyway.

Gbp-Pq: Name manpage_macros

4 years agompifort
Alastair McKinstry [Thu, 27 May 2021 08:16:24 +0000 (09:16 +0100)]
mpifort

===================================================================

Gbp-Pq: Name mpifort.patch

4 years agoEnable non-gfortran compilation
Alastair McKinstry [Thu, 27 May 2021 08:16:24 +0000 (09:16 +0100)]
Enable non-gfortran compilation

Last-Updated: 2020-01-13
Forwarded: no

Gbp-Pq: Name pkg-config.patch

4 years agoMemory leak in MPI_Allreduce when using a repeatedly created and freed MPI_Datatype
Alastair McKinstry [Thu, 27 May 2021 08:16:24 +0000 (09:16 +0100)]
Memory leak in MPI_Allreduce when using a repeatedly created and freed MPI_Datatype

Bug-Origin: https://github.com/open-mpi/ompi/issues/8827
Last-Updated: 2021-05-10
Forwarded: not-needed

Gbp-Pq: Name pr8827.patch

4 years agoopenmpi (4.1.0-10) unstable; urgency=medium
Alastair McKinstry [Thu, 27 May 2021 08:16:24 +0000 (09:16 +0100)]
openmpi (4.1.0-10) unstable; urgency=medium

  * Rebuild against ucx 1.10.1~rc1+really.1.10.0-1 for buster

[dgit import unpatched openmpi 4.1.0-10]

4 years agoImport openmpi_4.1.0-10.debian.tar.xz
Alastair McKinstry [Thu, 27 May 2021 08:16:24 +0000 (09:16 +0100)]
Import openmpi_4.1.0-10.debian.tar.xz

[dgit import tarball openmpi 4.1.0-10 openmpi_4.1.0-10.debian.tar.xz]

4 years agoImport openmpi_4.1.1.orig.tar.xz
Alastair McKinstry [Tue, 11 May 2021 09:11:22 +0000 (10:11 +0100)]
Import openmpi_4.1.1.orig.tar.xz

[dgit import orig openmpi_4.1.1.orig.tar.xz]

4 years agoMerge openmpi (4.1.0-8) import into refs/heads/workingbranch
Alastair McKinstry [Thu, 11 Mar 2021 18:29:08 +0000 (18:29 +0000)]
Merge openmpi (4.1.0-8) import into refs/heads/workingbranch

4 years agoBackport of grequest fix
Alastair McKinstry [Thu, 11 Mar 2021 18:29:08 +0000 (18:29 +0000)]
Backport of grequest fix

Bug-Origin:  https://github.com/open-mpi/ompi/pull/8347
Bug-Debian: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=979480
Forwarded: not-needed
Last-Updated: 2021-01-20

Gbp-Pq: Name grequest-fix.patch

4 years agoFix external PMIx v4.x check
Alastair McKinstry [Thu, 11 Mar 2021 18:29:08 +0000 (18:29 +0000)]
Fix external PMIx v4.x check

Bug-Origin: https://github.com/open-mpi/ompi/pull/8337
Last-Updated: 2021-01-09
Forwarded: not-needed

Gbp-Pq: Name external-pmix-fix.patch

4 years agoInclude missing plugin mca_op_avx.so
Alastair McKinstry [Thu, 11 Mar 2021 18:29:08 +0000 (18:29 +0000)]
Include missing plugin mca_op_avx.so

Bug-Origin: https://github.com/open-mpi/ompi/issues/8323
Last-Updated: 2021-01-02
Forwarded: not-needed

Gbp-Pq: Name missing-symbol.patch

4 years agoia64
Alastair McKinstry [Thu, 11 Mar 2021 18:29:08 +0000 (18:29 +0000)]
ia64

===================================================================

Gbp-Pq: Name ia64.patch

4 years agoTurn off warning that openfabric is not available
Alastair McKinstry [Thu, 11 Mar 2021 18:29:08 +0000 (18:29 +0000)]
Turn off warning that openfabric is not available

Last-Updated: 2021-01-21
Forwarded: not-needed

because it breaks some overlying layers/appications in Debian.
Also exclude openfabric/openib by default.

Gbp-Pq: Name no-warning-unused.patch

4 years agofix-underlinking
Graham Inggs [Thu, 11 Mar 2021 18:29:08 +0000 (18:29 +0000)]
fix-underlinking

Desciption: Fix underlinking
  Prevents symbol lookup error: ../openmpi4/mca_mtl_ofi.so:
  undefined symbol: fi_dupinfo when linked with --as-needed
Bug-Debian: https://bugs.debian.org/899104
Last-Update: 2018-05-23

Gbp-Pq: Name fix-underlinking.patch

4 years agoMakefile.ompi-rules: don't set silent building
Adrian Bunk [Thu, 11 Mar 2021 18:29:08 +0000 (18:29 +0000)]
Makefile.ompi-rules: don't set silent building

Gbp-Pq: Name verbose-ompi-rules.patch

4 years agofix test-suite to build on ppc64el
Thibaut Paumard [Thu, 11 Mar 2021 18:29:08 +0000 (18:29 +0000)]
fix test-suite to build on ppc64el

Origin: Vendor
Bug-Debian: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=848218
Forwarded: no
Last-Update: 2016-12-15

Test suite hangs on ppc64el. This is due to a bug in test/class/opal_fifo.c.
thread_test() must end with pthread_exit(NULL), not return NULL.
Last-Update: 2016-12-15
Gbp-Pq: Name opal_fifo.patch

4 years agoSupport for the HPPA architecture
Helge Deller [Thu, 11 Mar 2021 18:29:08 +0000 (18:29 +0000)]
Support for the HPPA architecture

Bug-Origin: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=776730
Last-Updated: 2016-09-04
Forwarded: no

Gbp-Pq: Name hppa.patch

4 years agoChange install libdir to openmpi3
Alastair McKinstry [Thu, 11 Mar 2021 18:29:08 +0000 (18:29 +0000)]
Change install libdir to openmpi3

Last-Updated: 2019-03-09
Forwarded: no

This is needed to ensure that libopenmpi2, libopenmpi3 do not collide.

Gbp-Pq: Name libdir.patch

4 years agoFix build problems on hurd-i386
Pino Toscano [Thu, 11 Mar 2021 18:29:08 +0000 (18:29 +0000)]
Fix build problems on hurd-i386

Forwarded: partially
Last-Update: 2018-10-24

This patch allows Open MPI to build on Debian GNU/HURD.

Also, the memory:linux MCA component is disabled, since its use of POSIX API
in malloc hooks called very early at startup causes troubles.

Also changes by Samuel Thibault <sthibault@debian.org>
See bugs.debian.org/846965

Gbp-Pq: Name build_hurd

4 years agoFix problems in manpages
Alastair McKinstry [Thu, 11 Mar 2021 18:29:08 +0000 (18:29 +0000)]
Fix problems in manpages

Forwarded: no
Last-Update: 2018-04-08

In some man page headers, a macro (-*-) is used which makes lintian
 choke and probably should not be there anyway.

Gbp-Pq: Name manpage_macros

4 years agompifort
Alastair McKinstry [Thu, 11 Mar 2021 18:29:08 +0000 (18:29 +0000)]
mpifort

===================================================================

Gbp-Pq: Name mpifort.patch

4 years agoEnable non-gfortran compilation
Alastair McKinstry [Thu, 11 Mar 2021 18:29:08 +0000 (18:29 +0000)]
Enable non-gfortran compilation

Last-Updated: 2020-01-13
Forwarded: no

Gbp-Pq: Name pkg-config.patch

4 years agoopenmpi (4.1.0-8) unstable; urgency=medium
Alastair McKinstry [Thu, 11 Mar 2021 18:29:08 +0000 (18:29 +0000)]
openmpi (4.1.0-8) unstable; urgency=medium

  * Ship mpiijavac.pl script. Closes: #984962

[dgit import unpatched openmpi 4.1.0-8]

4 years agoImport openmpi_4.1.0-8.debian.tar.xz
Alastair McKinstry [Thu, 11 Mar 2021 18:29:08 +0000 (18:29 +0000)]
Import openmpi_4.1.0-8.debian.tar.xz

[dgit import tarball openmpi 4.1.0-8 openmpi_4.1.0-8.debian.tar.xz]

4 years agoMerge openmpi (4.1.0-7) import into refs/heads/workingbranch
Alastair McKinstry [Wed, 20 Jan 2021 17:22:18 +0000 (17:22 +0000)]
Merge openmpi (4.1.0-7) import into refs/heads/workingbranch

4 years agoBackport of grequest fix
Alastair McKinstry [Wed, 20 Jan 2021 17:22:18 +0000 (17:22 +0000)]
Backport of grequest fix

Bug-Origin:  https://github.com/open-mpi/ompi/pull/8347
Bug-Debian: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=979480
Forwarded: not-needed
Last-Updated: 2021-01-20

Gbp-Pq: Name grequest-fix.patch

4 years agoFix external PMIx v4.x check
Alastair McKinstry [Wed, 20 Jan 2021 17:22:18 +0000 (17:22 +0000)]
Fix external PMIx v4.x check

Bug-Origin: https://github.com/open-mpi/ompi/pull/8337
Last-Updated: 2021-01-09
Forwarded: not-needed

Gbp-Pq: Name external-pmix-fix.patch

4 years agoInclude missing plugin mca_op_avx.so
Alastair McKinstry [Wed, 20 Jan 2021 17:22:18 +0000 (17:22 +0000)]
Include missing plugin mca_op_avx.so

Bug-Origin: https://github.com/open-mpi/ompi/issues/8323
Last-Updated: 2021-01-02
Forwarded: not-needed

Gbp-Pq: Name missing-symbol.patch

4 years agoia64
Alastair McKinstry [Wed, 20 Jan 2021 17:22:18 +0000 (17:22 +0000)]
ia64

===================================================================

Gbp-Pq: Name ia64.patch

4 years agoTurn off warning that openfabric is not available
Alastair McKinstry [Wed, 20 Jan 2021 17:22:18 +0000 (17:22 +0000)]
Turn off warning that openfabric is not available

Last-Updated: 2021-01-21
Forwarded: not-needed

because it breaks some overlying layers/appications in Debian.
Also exclude openfabric/openib by default.

Gbp-Pq: Name no-warning-unused.patch

4 years agofix-underlinking
Graham Inggs [Wed, 20 Jan 2021 17:22:18 +0000 (17:22 +0000)]
fix-underlinking

Desciption: Fix underlinking
  Prevents symbol lookup error: ../openmpi4/mca_mtl_ofi.so:
  undefined symbol: fi_dupinfo when linked with --as-needed
Bug-Debian: https://bugs.debian.org/899104
Last-Update: 2018-05-23

Gbp-Pq: Name fix-underlinking.patch

4 years agoMakefile.ompi-rules: don't set silent building
Adrian Bunk [Wed, 20 Jan 2021 17:22:18 +0000 (17:22 +0000)]
Makefile.ompi-rules: don't set silent building

Gbp-Pq: Name verbose-ompi-rules.patch

4 years agofix test-suite to build on ppc64el
Thibaut Paumard [Wed, 20 Jan 2021 17:22:18 +0000 (17:22 +0000)]
fix test-suite to build on ppc64el

Origin: Vendor
Bug-Debian: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=848218
Forwarded: no
Last-Update: 2016-12-15

Test suite hangs on ppc64el. This is due to a bug in test/class/opal_fifo.c.
thread_test() must end with pthread_exit(NULL), not return NULL.
Last-Update: 2016-12-15
Gbp-Pq: Name opal_fifo.patch

4 years agoSupport for the HPPA architecture
Helge Deller [Wed, 20 Jan 2021 17:22:18 +0000 (17:22 +0000)]
Support for the HPPA architecture

Bug-Origin: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=776730
Last-Updated: 2016-09-04
Forwarded: no

Gbp-Pq: Name hppa.patch

4 years agoChange install libdir to openmpi3
Alastair McKinstry [Wed, 20 Jan 2021 17:22:18 +0000 (17:22 +0000)]
Change install libdir to openmpi3

Last-Updated: 2019-03-09
Forwarded: no

This is needed to ensure that libopenmpi2, libopenmpi3 do not collide.

Gbp-Pq: Name libdir.patch

4 years agoFix build problems on hurd-i386
Pino Toscano [Wed, 20 Jan 2021 17:22:18 +0000 (17:22 +0000)]
Fix build problems on hurd-i386

Forwarded: partially
Last-Update: 2018-10-24

This patch allows Open MPI to build on Debian GNU/HURD.

Also, the memory:linux MCA component is disabled, since its use of POSIX API
in malloc hooks called very early at startup causes troubles.

Also changes by Samuel Thibault <sthibault@debian.org>
See bugs.debian.org/846965

Gbp-Pq: Name build_hurd

4 years agoFix problems in manpages
Alastair McKinstry [Wed, 20 Jan 2021 17:22:18 +0000 (17:22 +0000)]
Fix problems in manpages

Forwarded: no
Last-Update: 2018-04-08

In some man page headers, a macro (-*-) is used which makes lintian
 choke and probably should not be there anyway.

Gbp-Pq: Name manpage_macros

4 years agompifort
Alastair McKinstry [Wed, 20 Jan 2021 17:22:18 +0000 (17:22 +0000)]
mpifort

===================================================================

Gbp-Pq: Name mpifort.patch

4 years agoEnable non-gfortran compilation
Alastair McKinstry [Wed, 20 Jan 2021 17:22:18 +0000 (17:22 +0000)]
Enable non-gfortran compilation

Last-Updated: 2020-01-13
Forwarded: no

Gbp-Pq: Name pkg-config.patch

4 years agoopenmpi (4.1.0-7) unstable; urgency=medium
Alastair McKinstry [Wed, 20 Jan 2021 17:22:18 +0000 (17:22 +0000)]
openmpi (4.1.0-7) unstable; urgency=medium

  * Also disable ofi BTL to avoid libfabric issues
    (user can re-enable on systems with RDMA hardware)
Closes: #979041
  * Backport grequest fix from 4.1.x. Closes: #979480

[dgit import unpatched openmpi 4.1.0-7]

4 years agoImport openmpi_4.1.0-7.debian.tar.xz
Alastair McKinstry [Wed, 20 Jan 2021 17:22:18 +0000 (17:22 +0000)]
Import openmpi_4.1.0-7.debian.tar.xz

[dgit import tarball openmpi 4.1.0-7 openmpi_4.1.0-7.debian.tar.xz]

4 years agoImport openmpi_4.1.0.orig.tar.xz
Alastair McKinstry [Mon, 21 Dec 2020 10:56:34 +0000 (10:56 +0000)]
Import openmpi_4.1.0.orig.tar.xz

[dgit import orig openmpi_4.1.0.orig.tar.xz]

5 years agoMerge openmpi (4.0.5-7) import into refs/heads/workingbranch
Alastair McKinstry [Wed, 14 Oct 2020 19:08:08 +0000 (20:08 +0100)]
Merge openmpi (4.0.5-7) import into refs/heads/workingbranch

5 years agoia64
Alastair McKinstry [Wed, 14 Oct 2020 19:08:08 +0000 (20:08 +0100)]
ia64

===================================================================

Gbp-Pq: Name ia64.patch

5 years agoTurn off warning that openfabric is not available
Alastair McKinstry [Wed, 14 Oct 2020 19:08:08 +0000 (20:08 +0100)]
Turn off warning that openfabric is not available

Last-Updated: 2019-11-19
Forwarded: no

because it breaks some overlying layers/appications in Debian

Gbp-Pq: Name no-warning-unused.patch

5 years agofix-underlinking
Graham Inggs [Wed, 14 Oct 2020 19:08:08 +0000 (20:08 +0100)]
fix-underlinking

Desciption: Fix underlinking
  Prevents symbol lookup error: ../openmpi4/mca_mtl_ofi.so:
  undefined symbol: fi_dupinfo when linked with --as-needed
Bug-Debian: https://bugs.debian.org/899104
Last-Update: 2018-05-23

Gbp-Pq: Name fix-underlinking.patch

5 years agoMakefile.ompi-rules: don't set silent building
Adrian Bunk [Wed, 14 Oct 2020 19:08:08 +0000 (20:08 +0100)]
Makefile.ompi-rules: don't set silent building

Gbp-Pq: Name verbose-ompi-rules.patch

5 years agofix test-suite to build on ppc64el
Thibaut Paumard [Wed, 14 Oct 2020 19:08:08 +0000 (20:08 +0100)]
fix test-suite to build on ppc64el

Origin: Vendor
Bug-Debian: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=848218
Forwarded: no
Last-Update: 2016-12-15

Test suite hangs on ppc64el. This is due to a bug in test/class/opal_fifo.c.
thread_test() must end with pthread_exit(NULL), not return NULL.
Last-Update: 2016-12-15
Gbp-Pq: Name opal_fifo.patch

5 years agoSupport for the HPPA architecture
Helge Deller [Wed, 14 Oct 2020 19:08:08 +0000 (20:08 +0100)]
Support for the HPPA architecture

Bug-Origin: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=776730
Last-Updated: 2016-09-04
Forwarded: no

Gbp-Pq: Name hppa.patch

5 years agoChange install libdir to openmpi3
Alastair McKinstry [Wed, 14 Oct 2020 19:08:08 +0000 (20:08 +0100)]
Change install libdir to openmpi3

Last-Updated: 2019-03-09
Forwarded: no

This is needed to ensure that libopenmpi2, libopenmpi3 do not collide.

Gbp-Pq: Name libdir.patch

5 years agoFix build problems on hurd-i386
Pino Toscano [Wed, 14 Oct 2020 19:08:08 +0000 (20:08 +0100)]
Fix build problems on hurd-i386

Forwarded: partially
Last-Update: 2018-10-24

This patch allows Open MPI to build on Debian GNU/HURD.

Also, the memory:linux MCA component is disabled, since its use of POSIX API
in malloc hooks called very early at startup causes troubles.

Also changes by Samuel Thibault <sthibault@debian.org>
See bugs.debian.org/846965

Gbp-Pq: Name build_hurd

5 years agoFix problems in manpages
Alastair McKinstry [Wed, 14 Oct 2020 19:08:08 +0000 (20:08 +0100)]
Fix problems in manpages

Forwarded: no
Last-Update: 2018-04-08

In some man page headers, a macro (-*-) is used which makes lintian
 choke and probably should not be there anyway.

Gbp-Pq: Name manpage_macros

5 years agompifort
Alastair McKinstry [Wed, 14 Oct 2020 19:08:08 +0000 (20:08 +0100)]
mpifort

===================================================================

Gbp-Pq: Name mpifort.patch

5 years agoEnable non-gfortran compilation
Alastair McKinstry [Wed, 14 Oct 2020 19:08:08 +0000 (20:08 +0100)]
Enable non-gfortran compilation

Last-Updated: 2020-01-13
Forwarded: no

Gbp-Pq: Name pkg-config.patch

5 years agoopenmpi (4.0.5-7) unstable; urgency=medium
Alastair McKinstry [Wed, 14 Oct 2020 19:08:08 +0000 (20:08 +0100)]
openmpi (4.0.5-7) unstable; urgency=medium

  * Undo NO_PMIX_ARCH for armel, mipsel no longer needed as atomic
    primitives now provided in external pmix. Closes: #971669

[dgit import unpatched openmpi 4.0.5-7]

5 years agoImport openmpi_4.0.5-7.debian.tar.xz
Alastair McKinstry [Wed, 14 Oct 2020 19:08:08 +0000 (20:08 +0100)]
Import openmpi_4.0.5-7.debian.tar.xz

[dgit import tarball openmpi 4.0.5-7 openmpi_4.0.5-7.debian.tar.xz]

5 years agoMerge openmpi (4.0.5-5) import into refs/heads/workingbranch
Alastair McKinstry [Mon, 21 Sep 2020 20:29:06 +0000 (21:29 +0100)]
Merge openmpi (4.0.5-5) import into refs/heads/workingbranch

5 years agoia64
Alastair McKinstry [Mon, 21 Sep 2020 20:29:06 +0000 (21:29 +0100)]
ia64

===================================================================

Gbp-Pq: Name ia64.patch

5 years agoTurn off warning that openfabric is not available
Alastair McKinstry [Mon, 21 Sep 2020 20:29:06 +0000 (21:29 +0100)]
Turn off warning that openfabric is not available

Last-Updated: 2019-11-19
Forwarded: no

because it breaks some overlying layers/appications in Debian

Gbp-Pq: Name no-warning-unused.patch

5 years agofix-underlinking
Graham Inggs [Mon, 21 Sep 2020 20:29:06 +0000 (21:29 +0100)]
fix-underlinking

Desciption: Fix underlinking
  Prevents symbol lookup error: ../openmpi4/mca_mtl_ofi.so:
  undefined symbol: fi_dupinfo when linked with --as-needed
Bug-Debian: https://bugs.debian.org/899104
Last-Update: 2018-05-23

Gbp-Pq: Name fix-underlinking.patch

5 years agoMakefile.ompi-rules: don't set silent building
Adrian Bunk [Mon, 21 Sep 2020 20:29:06 +0000 (21:29 +0100)]
Makefile.ompi-rules: don't set silent building

Gbp-Pq: Name verbose-ompi-rules.patch

5 years agofix test-suite to build on ppc64el
Thibaut Paumard [Mon, 21 Sep 2020 20:29:06 +0000 (21:29 +0100)]
fix test-suite to build on ppc64el

Origin: Vendor
Bug-Debian: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=848218
Forwarded: no
Last-Update: 2016-12-15

Test suite hangs on ppc64el. This is due to a bug in test/class/opal_fifo.c.
thread_test() must end with pthread_exit(NULL), not return NULL.
Last-Update: 2016-12-15
Gbp-Pq: Name opal_fifo.patch

5 years agoSupport for the HPPA architecture
Helge Deller [Mon, 21 Sep 2020 20:29:06 +0000 (21:29 +0100)]
Support for the HPPA architecture

Bug-Origin: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=776730
Last-Updated: 2016-09-04
Forwarded: no

Gbp-Pq: Name hppa.patch

5 years agoChange install libdir to openmpi3
Alastair McKinstry [Mon, 21 Sep 2020 20:29:06 +0000 (21:29 +0100)]
Change install libdir to openmpi3

Last-Updated: 2019-03-09
Forwarded: no

This is needed to ensure that libopenmpi2, libopenmpi3 do not collide.

Gbp-Pq: Name libdir.patch

5 years agoFix build problems on hurd-i386
Pino Toscano [Mon, 21 Sep 2020 20:29:06 +0000 (21:29 +0100)]
Fix build problems on hurd-i386

Forwarded: partially
Last-Update: 2018-10-24

This patch allows Open MPI to build on Debian GNU/HURD.

Also, the memory:linux MCA component is disabled, since its use of POSIX API
in malloc hooks called very early at startup causes troubles.

Also changes by Samuel Thibault <sthibault@debian.org>
See bugs.debian.org/846965

Gbp-Pq: Name build_hurd

5 years agoFix problems in manpages
Alastair McKinstry [Mon, 21 Sep 2020 20:29:06 +0000 (21:29 +0100)]
Fix problems in manpages

Forwarded: no
Last-Update: 2018-04-08

In some man page headers, a macro (-*-) is used which makes lintian
 choke and probably should not be there anyway.

Gbp-Pq: Name manpage_macros

5 years agompifort
Alastair McKinstry [Mon, 21 Sep 2020 20:29:06 +0000 (21:29 +0100)]
mpifort

===================================================================

Gbp-Pq: Name mpifort.patch

5 years agoEnable non-gfortran compilation
Alastair McKinstry [Mon, 21 Sep 2020 20:29:06 +0000 (21:29 +0100)]
Enable non-gfortran compilation

Last-Updated: 2020-01-13
Forwarded: no

Gbp-Pq: Name pkg-config.patch

5 years agoopenmpi (4.0.5-5) unstable; urgency=medium
Alastair McKinstry [Mon, 21 Sep 2020 20:29:06 +0000 (21:29 +0100)]
openmpi (4.0.5-5) unstable; urgency=medium

  * Drop amd64 from NO_PMIX_ARCH (debugging test). Closes: #970698
  * Update Breaks/Replaces to cope with bug regression below

[dgit import unpatched openmpi 4.0.5-5]

5 years agoImport openmpi_4.0.5-5.debian.tar.xz
Alastair McKinstry [Mon, 21 Sep 2020 20:29:06 +0000 (21:29 +0100)]
Import openmpi_4.0.5-5.debian.tar.xz

[dgit import tarball openmpi 4.0.5-5 openmpi_4.0.5-5.debian.tar.xz]