Merge python-pysam (0.15.1+ds-1) import into refs/heads/workingbranch

skip_test_needing_missing_data

Gbp-Pq: Name skip_test_needing_missing_data.patch

skip_test_remote

Gbp-Pq: Name skip_test_remote.patch

python-pysam (0.15.1+ds-1) unstable; urgency=medium

  * Team upload.

  * New upstream version.
    - Removes autogenerated config.h - [many thanks!]
      https://github.com/pysam-developers/pysam/issues/714
    - Explicit compatibility with Python 3.7
  * Removed patch skipping test that complained on missing file

[dgit import unpatched python-pysam 0.15.1+ds-1]

Import python-pysam_0.15.1+ds.orig.tar.gz

[dgit import orig python-pysam_0.15.1+ds.orig.tar.gz]

Import python-pysam_0.15.1+ds-1.debian.tar.xz

[dgit import tarball python-pysam 0.15.1+ds-1 python-pysam_0.15.1+ds-1.debian.tar.xz]

Merge python-pysam (0.14+ds-2) import into refs/heads/workingbranch

skip_test_needing_missing_data

Gbp-Pq: Name skip_test_needing_missing_data.patch

exclude_tests_accessing_remote_http

Gbp-Pq: Name exclude_tests_accessing_remote_http.patch

xfail

Gbp-Pq: Name xfail.patch

execute linking tests only when explicitly requested via PYSAM_LINKING_TESTS env var. Keep on travis. Fixes #534

Gbp-Pq: Name execute-linking-tests-only-when-explicitely-reque.patch

python-pysam (0.14+ds-2) unstable; urgency=medium

  * Team upload
  * Add Python 2.7 compatibility symlink for libchtslib.so (Closes: #890748)
  * Update Vcs-* URIs for move to salsa.debian.org
  * Remove trailing whitespace from debian/changelog

[dgit import unpatched python-pysam 0.14+ds-2]

Import python-pysam_0.14+ds-2.debian.tar.xz

[dgit import tarball python-pysam 0.14+ds-2 python-pysam_0.14+ds-2.debian.tar.xz]

Import python-pysam_0.14+ds.orig.tar.gz

[dgit import orig python-pysam_0.14+ds.orig.tar.gz]

Merge python-pysam (0.12.0.1+ds-4) import into refs/heads/workingbranch

xfail

Gbp-Pq: Name xfail.patch

rename helper function to prevent it from being picked up by nose, fixes #541

Gbp-Pq: Name rename-helper-function-to-prevent-it-from-being-picked-up-by-nose.patch

execute linking tests only when explicitely requested via PYSAM_LINKING_TESTS env var. Keep on travis. Fixes #534

Gbp-Pq: Name execute-linking-tests-only-when-explicitely-reque.patch

python-pysam (0.12.0.1+ds-4) unstable; urgency=medium

  * Team upload.
  * Revert "Skip tests on ppc64el to avoid build-dep on bcftools currently
    uninstallable".  It seems to be installable now, and anyway now that the
    python3 transition is done we should fix it properly anyway.
  * d/control:
    + Bump the libhts-dev buil-dep to 1.5-3, to make sure we gain appropriate
      versioned symbols and therefore an appropriate versioned dependency on
      libhts2.  Closes: #879867
    + Bump Standards-Version to 4.1.1.

[dgit import unpatched python-pysam 0.12.0.1+ds-4]

Import python-pysam_0.12.0.1+ds-4.debian.tar.xz

[dgit import tarball python-pysam 0.12.0.1+ds-4 python-pysam_0.12.0.1+ds-4.debian.tar.xz]

xfail

Gbp-Pq: Name xfail.patch

rename helper function to prevent it from being picked up by nose, fixes #541

Gbp-Pq: Name rename-helper-function-to-prevent-it-from-being-picked-up-by-nose.patch

execute linking tests only when explicitely requested via PYSAM_LINKING_TESTS env var. Keep on travis. Fixes #534

Gbp-Pq: Name execute-linking-tests-only-when-explicitely-reque.patch

python-pysam (0.12.0.1+ds-3) unstable; urgency=medium

  * Team upload.
  * Support DEB_BUILD_OPTIONS=nocheck.
  * Skip tests on ppc64el to avoid build-dep on bcftools which is currently
    uninstallable.
    Hopefully this will help unstuck the current python3 transition.

[dgit import unpatched python-pysam 0.12.0.1+ds-3]

Import python-pysam_0.12.0.1+ds-3.debian.tar.xz

[dgit import tarball python-pysam 0.12.0.1+ds-3 python-pysam_0.12.0.1+ds-3.debian.tar.xz]

Import python-pysam_0.12.0.1+ds.orig.tar.gz

[dgit import orig python-pysam_0.12.0.1+ds.orig.tar.gz]