Merge pandas (0.25.3+dfsg-7) import into refs/heads/workingbranch

Xfail tests using non-functioning URLs

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Forwarded: no

Gbp-Pq: Name xfail_tests_404.patch

Use https for links where possible

Also fix some (semi-)broken links found while checking https availability.

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Forwarded: accepted for 1.1 https://github.com/pandas-dev/pandas/pull/31145

Gbp-Pq: Name link_security.patch

Allow tests to use the data files in the source tree

We don't ship these in the package,
but do want to run the tests that use them

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Forwarded: not-needed

Gbp-Pq: Name find_test_data.patch

Don't fail tests on warning from matplotlib

New in Python 3.8

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Forwarded: no

Gbp-Pq: Name ignore_matplotlib_warning.patch

Use fixed seeds for reproducible pseudorandomness

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Forwarded: no

Gbp-Pq: Name fix_random_seeds.patch

Fix or skip tests that assume the wrong endianness

This is a bug in the tests not pandas itself -
the expected values explicitly specify little-endian

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Forwarded: no

Gbp-Pq: Name tests_dont_assume_endian.patch

Don't try to read a contributor list from the git log

Debian packages are built from tarballs, so there isn't a git log.

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Forwarded: no

Gbp-Pq: Name contributor_list_not_in_tarball.patch

Skip feather tests if pyarrow not available

pandas now needs pyarrow.feather (not in Debian),
not python3-feather-format, for read_feather/to_feather

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Forwarded: no

Gbp-Pq: Name pyarrow_feather.patch

Use Python 3 shebangs and subprocess calls

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Forwarded: no

Gbp-Pq: Name fix_shebangs.patch

Fix typos

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Origin: lintian
Forwarded: no

Gbp-Pq: Name spelling.patch

Use packaged intersphinx indexes, and use https links

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Bug-Debian: https://bugs.debian.org/876417
Forwarded: no

Gbp-Pq: Name use_system_intersphinx.patch

Don't test datetime in locales with no encoding

Some datetime tests run the test in every available locale.
If this set includes locales without an encoding (currently dsb_DE
and sah_RU), it fails due to Python bug
https://bugs.python.org/issue20088

Failure log
https://tests.reproducible-builds.org/debian/rbuild/buster/amd64/pandas_0.23.3+dfsg-3.rbuild.log.gz

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Bug: https://github.com/pandas-dev/pandas/issues/20957
Forwarded: no

Gbp-Pq: Name skip_noencoding_locales.patch

Skip tests removed for copyright reasons

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Forwarded: no

Gbp-Pq: Name skip_tests_copyright.patch

Xfail NaN <-> NaT tests on non-x86 and warn on cast

pd.Series([np.nan]).astype('datetime64[ns]')[0] = pd.NaT on x86
but 1970-01-01 on arm* because float NaN -> int is undefined:
https://github.com/numpy/numpy/issues/8325
https://github.com/pandas-dev/pandas/issues/17792
https://github.com/pandas-dev/pandas/issues/26964

On s390x it's the maximum _positive_ value (2**63-1 ns = year 2262)

Author: Andreas Tille <tille@debian.org>, Graham Inggs <ginggs@debian.org>, Rebecca N. Palmer <rebecca_palmer@zoho.com>
Bug-Debian: https://bugs.debian.org/877754

Gbp-Pq: Name xfail_tests_nonintel_nannat.patch

deb_ndsphinx_optional

Gbp-Pq: Name deb_ndsphinx_optional

Use Debian packaged mathjax

Gbp-Pq: Name mathjax-path.patch

deb_no_strict_data

Gbp-Pq: Name deb_no_strict_data

Avoid privacy breach by Google Analytics

Last-Update: Mon, 23 Oct 2017 08:55:28 +0200

Gbp-Pq: Name deb_disable_googleanalytics

HDF5 and Stata I/O are broken on some architectures

Warn on use, and xfail tests

HDF5 known to fail on s390x, Stata on s390x and ppc64el (in 1.0.0),
but not all architectures have been checked yet

In 0.25.3 HDF5 _crashes_ on armhf, so skip
(pytest-forked allows continuing past a crash,
but still seems to fail on xfailed crashes)

Author: Andreas Tille <tille@debian.org>, Graham Inggs <ginggs@debian.org>, Yaroslav Halchenko <debian@onerussian.com>, Rebecca N. Palmer <rebecca_palmer@zoho.com>
Bug-Debian: https://bugs.debian.org/877419

Gbp-Pq: Name xfail_tests_nonintel_io.patch

deb_doc_donotoverride_PYTHONPATH

Gbp-Pq: Name deb_doc_donotoverride_PYTHONPATH

deb_nonversioneer_version

Gbp-Pq: Name deb_nonversioneer_version

pandas (0.25.3+dfsg-7) unstable; urgency=medium

  * Fix another test failure due to our warnings.
  * Skip rather than xfail crashing tests.

[dgit import unpatched pandas 0.25.3+dfsg-7]

Import pandas_0.25.3+dfsg-7.debian.tar.xz

[dgit import tarball pandas 0.25.3+dfsg-7 pandas_0.25.3+dfsg-7.debian.tar.xz]

Merge pandas (0.25.3+dfsg-4) import into refs/heads/workingbranch

ignore_matplotlib_warning

New in Python 3.8

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Forwarded: no

Gbp-Pq: Name ignore_matplotlib_warning.patch

fix_random_seeds

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Forwarded: no

Gbp-Pq: Name fix_random_seeds.patch

tests_dont_assume_endian

This is a bug in the tests not pandas itself -
the expected values explicitly specify little-endian

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Forwarded: no

Gbp-Pq: Name tests_dont_assume_endian.patch

contributor_list_not_in_tarball

Debian packages are built from tarballs, so there isn't a git log.

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Forwarded: no

Gbp-Pq: Name contributor_list_not_in_tarball.patch

pyarrow_feather

pandas now needs pyarrow.feather (not in Debian),
not python3-feather-format, for read_feather/to_feather

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Forwarded: no

Gbp-Pq: Name pyarrow_feather.patch

fix_shebangs

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Forwarded: no

Gbp-Pq: Name fix_shebangs.patch

spelling

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Origin: lintian
Forwarded: no

Gbp-Pq: Name spelling.patch

use_system_intersphinx

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Bug-Debian: https://bugs.debian.org/876417
Forwarded: no

Gbp-Pq: Name use_system_intersphinx.patch

skip_noencoding_locales

Some datetime tests run the test in every available locale.
If this set includes locales without an encoding (currently dsb_DE
and sah_RU), it fails due to Python bug
https://bugs.python.org/issue20088

Failure log
https://tests.reproducible-builds.org/debian/rbuild/buster/amd64/pandas_0.23.3+dfsg-3.rbuild.log.gz

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Bug: https://github.com/pandas-dev/pandas/issues/20957
Forwarded: no

Gbp-Pq: Name skip_noencoding_locales.patch

skip_tests_copyright

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Forwarded: no

Gbp-Pq: Name skip_tests_copyright.patch

Skip two tests which fail when ran in full battery during pkg build

Origin: (Neuro)Debian
Bug: https://github.com/pandas-dev/pandas/issues/19774
Last-Update: 2018-02-20

Gbp-Pq: Name deb_skip_difffailingtests

mark_tests_failing_on_386

Gbp-Pq: Name mark_tests_failing_on_386.patch

mark_tests_working_on_intel_armhf

At least some of these are pd.Timestamp(np.nan) = pd.NaT on x86
but 1970-01-01 on arm* because float NaN -> int is undefined:
https://github.com/numpy/numpy/issues/8325
https://github.com/pandas-dev/pandas/issues/17792
https://github.com/pandas-dev/pandas/issues/26964

Author: Andreas Tille <tille@debian.org>, Graham Inggs <ginggs@debian.org>, Rebecca N. Palmer <rebecca_palmer@zoho.com>
Bug-Debian: https://bugs.debian.org/877419 https://bugs.debian.org/877754

Gbp-Pq: Name mark_tests_working_on_intel_armhf.patch

mark_tests_working_on_intel_mips

Gbp-Pq: Name mark_tests_working_on_intel_mips.patch

mark_tests_working_on_intel_s390x

Gbp-Pq: Name mark_tests_working_on_intel_s390x.patch

mark_tests_working_on_intel

Last-Update Sat, 14 Oct 2017 19:42:59 +0200
Bug-Debian: https://bugs.debian.org/877419
Author: Graham Inggs <ginggs@debian.org>
Last-Update: 2018-04-11

Gbp-Pq: Name mark_tests_working_on_intel.patch

deb_ndsphinx_optional

Gbp-Pq: Name deb_ndsphinx_optional

mathjax-path

Gbp-Pq: Name mathjax-path.patch

deb_no_strict_data

Gbp-Pq: Name deb_no_strict_data

deb_skip_sequencelike_on_armel

Gbp-Pq: Name deb_skip_sequencelike_on_armel

deb_disable_googleanalytics

Gbp-Pq: Name deb_disable_googleanalytics

deb_skip_stata_on_bigendians

Gbp-Pq: Name deb_skip_stata_on_bigendians

deb_doc_donotoverride_PYTHONPATH

Gbp-Pq: Name deb_doc_donotoverride_PYTHONPATH

deb_nonversioneer_version

Gbp-Pq: Name deb_nonversioneer_version

pandas (0.25.3+dfsg-4) unstable; urgency=medium

  * No-change upload to unstable.  (Closes: #937236, #931557)

[dgit import unpatched pandas 0.25.3+dfsg-4]

Import pandas_0.25.3+dfsg-4.debian.tar.xz

[dgit import tarball pandas 0.25.3+dfsg-4 pandas_0.25.3+dfsg-4.debian.tar.xz]

Import pandas_0.25.3+dfsg.orig.tar.gz

[dgit import orig pandas_0.25.3+dfsg.orig.tar.gz]

Merge pandas (0.23.3+dfsg-8) import into refs/heads/workingbranch

fix_shebangs

The bug was in pandas/tests/io/generate_legacy_storage_files.py

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Forwarded: no

Gbp-Pq: Name fix_shebangs.patch

spelling

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Origin: lintian
Forwarded: no

Gbp-Pq: Name spelling.patch

use_system_intersphinx

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Bug-Debian: https://bugs.debian.org/876417
Forwarded: no

Gbp-Pq: Name use_system_intersphinx.patch

skip_noencoding_locales

Some datetime tests run the test in every available locale.
If this set includes locales without an encoding (currently dsb_DE
and sah_RU), it fails due to Python bug
https://bugs.python.org/issue20088

Failure log
https://tests.reproducible-builds.org/debian/rbuild/buster/amd64/pandas_0.23.3+dfsg-3.rbuild.log.gz

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Bug: https://github.com/pandas-dev/pandas/issues/20957
Forwarded: no

Gbp-Pq: Name skip_noencoding_locales.patch

pytest_fixtures

This is not allowed in recent pytest:
https://tests.reproducible-builds.org/debian/rbuild/unstable/amd64/pandas_0.23.3+dfsg-3.rbuild.log.gz
https://ci.debian.net/data/autopkgtest/testing/amd64/p/pandas/2954485/log.gz

Origin: upstream b7e5704be86cb44707ae9be372129e521c35e0d0 + 1a12c41d201f56439510e683fadfed1218ea9067
Author: alimcmaster1, Tom Augspurger
Bug: https://github.com/pandas-dev/pandas/issues/22338

Gbp-Pq: Name pytest_fixtures.patch

array_series_matmul

Author: Ming Li
Origin: upstream
Bug-Debian: https://bugs.debian.org/923708
Forwarded: not-needed

Gbp-Pq: Name array_series_matmul.patch

skip_tests_copyright

and revert accidental change to _version.py

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Forwarded: no

Gbp-Pq: Name skip_tests_copyright.patch

918206

Using this and not upstream's __array_priority__ fix
https://github.com/pandas-dev/pandas/commit/ad2a14f4bec8a004b2972c12f12ed3e4ce37ff52
to allow np.array += DataFrame to remain in-place (same object ID /
other views also affected) and an array (not a DataFrame).

Author: jbrockmendel, Rebecca N. Palmer <rebecca_palmer@zoho.com>
Origin: upstream
Bug-Debian: https://bugs.debian.org/918206 https://bugs.debian.org/923707
Forwarded: not-needed

Gbp-Pq: Name 918206.patch

Skip two tests which fail when ran in full battery during pkg build

Origin: (Neuro)Debian
Bug: https://github.com/pandas-dev/pandas/issues/19774
Last-Update: 2018-02-20

Gbp-Pq: Name deb_skip_difffailingtests

deb_ndsphinx_optional

Gbp-Pq: Name deb_ndsphinx_optional

mathjax-path

Gbp-Pq: Name mathjax-path.patch

mark_tests_failing_on_386

Gbp-Pq: Name mark_tests_failing_on_386.patch

mark_tests_working_on_intel_armhf

Gbp-Pq: Name mark_tests_working_on_intel_armhf.patch

mark_tests_working_on_intel_mips

Gbp-Pq: Name mark_tests_working_on_intel_mips.patch

mark_tests_working_on_intel_s390x

Gbp-Pq: Name mark_tests_working_on_intel_s390x.patch

mark_tests_working_on_intel

Last-Update Sat, 14 Oct 2017 19:42:59 +0200
Bug-Debian: https://bugs.debian.org/877419
Author: Graham Inggs <ginggs@debian.org>
Last-Update: 2018-04-11

Gbp-Pq: Name mark_tests_working_on_intel.patch

up_print_versions

Gbp-Pq: Name up_print_versions

deb_no_strict_data

Gbp-Pq: Name deb_no_strict_data

deb_skip_sequencelike_on_armel

Gbp-Pq: Name deb_skip_sequencelike_on_armel

deb_disable_googleanalytics

Gbp-Pq: Name deb_disable_googleanalytics

deb_skip_stata_on_bigendians

Gbp-Pq: Name deb_skip_stata_on_bigendians

deb_doc_donotoverride_PYTHONPATH

Gbp-Pq: Name deb_doc_donotoverride_PYTHONPATH

deb_nonversioneer_version

Gbp-Pq: Name deb_nonversioneer_version

skip the assert for now - remove patch whenever upstream issue is closed

Gbp-Pq: Name up_skip_testrepr

pandas (0.23.3+dfsg-8) unstable; urgency=medium

  * Examples dependencies: re-add statsmodels and xarray;
    also add rpy2 and feather.
  * Use packaged intersphinx indexes.  (Closes: #876417)
  * Use https for intersphinx links.
  * Remove cythonized-files*.  (They are regenerated on each build.)
  * Remove test xfail, as statsmodels has now been fixed.
  * Set Rules-Requires-Root: no.
  * Make documentation Suggest the Python 3 version.
  * Suggest statsmodels.
  * Only use Python 3 sphinx, and mark it -Indep/nodoc.
  * Bump debhelper compat to 12 and use debhelper-compat and pybuild.
  * Remove pycompat and X-Python*-Version.
  * Add missing d/copyright item.
  * Remove obsolete TODOs.
  * Clarify descriptions.
  * Stop referring to examples that no longer exist.
  * Fix typos.
  * Remove old (no longer used) EXCLUDE_TESTS*.
  * Deduplicate documentation files.
  * Use Python 3 shebangs, and fix broken shebang.
  * Add python3-ipykernel, -ipywidgets, -seaborn to
    Build-Depends-Indep.
  * Disable dh_auto_test: it fails, and we run the tests elsewhere.
  * Mark test dependencies nocheck/nodoc.
  * Remove old minimum versions / alternative dependencies.
  * Build-depend on dh-python.
  * Don't build on python3.8, as it will fail tests (see #931557).

[dgit import unpatched pandas 0.23.3+dfsg-8]

Import pandas_0.23.3+dfsg-8.debian.tar.xz

[dgit import tarball pandas 0.23.3+dfsg-8 pandas_0.23.3+dfsg-8.debian.tar.xz]

Merge pandas (0.23.3+dfsg-7) import into refs/heads/workingbranch

xfail_statsmodels_bug

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Bug: https://github.com/pandas-dev/pandas/issues/24088
Forwarded: not-needed

Gbp-Pq: Name xfail_statsmodels_bug.patch

skip_noencoding_locales

Some datetime tests run the test in every available locale.
If this set includes locales without an encoding (currently dsb_DE
and sah_RU), it fails due to Python bug
https://bugs.python.org/issue20088

Failure log
https://tests.reproducible-builds.org/debian/rbuild/buster/amd64/pandas_0.23.3+dfsg-3.rbuild.log.gz

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Bug: https://github.com/pandas-dev/pandas/issues/20957
Forwarded: no

Gbp-Pq: Name skip_noencoding_locales.patch

pytest_fixtures

This is not allowed in recent pytest:
https://tests.reproducible-builds.org/debian/rbuild/unstable/amd64/pandas_0.23.3+dfsg-3.rbuild.log.gz
https://ci.debian.net/data/autopkgtest/testing/amd64/p/pandas/2954485/log.gz

Origin: upstream b7e5704be86cb44707ae9be372129e521c35e0d0 + 1a12c41d201f56439510e683fadfed1218ea9067
Author: alimcmaster1, Tom Augspurger
Bug: https://github.com/pandas-dev/pandas/issues/22338

Gbp-Pq: Name pytest_fixtures.patch

array_series_matmul

Author: Ming Li
Origin: upstream
Bug-Debian: https://bugs.debian.org/923708
Forwarded: not-needed

Gbp-Pq: Name array_series_matmul.patch

skip_tests_copyright

and revert accidental change to _version.py

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Forwarded: no

Gbp-Pq: Name skip_tests_copyright.patch

918206

Using this and not upstream's __array_priority__ fix
https://github.com/pandas-dev/pandas/commit/ad2a14f4bec8a004b2972c12f12ed3e4ce37ff52
to allow np.array += DataFrame to remain in-place (same object ID /
other views also affected) and an array (not a DataFrame).

Author: jbrockmendel, Rebecca N. Palmer <rebecca_palmer@zoho.com>
Origin: upstream
Bug-Debian: https://bugs.debian.org/918206 https://bugs.debian.org/923707
Forwarded: not-needed

Gbp-Pq: Name 918206.patch

Skip two tests which fail when ran in full battery during pkg build

Origin: (Neuro)Debian
Bug: https://github.com/pandas-dev/pandas/issues/19774
Last-Update: 2018-02-20

Gbp-Pq: Name deb_skip_difffailingtests

deb_ndsphinx_optional

Gbp-Pq: Name deb_ndsphinx_optional

mathjax-path

Gbp-Pq: Name mathjax-path.patch

mark_tests_failing_on_386

Gbp-Pq: Name mark_tests_failing_on_386.patch

mark_tests_working_on_intel_armhf

Gbp-Pq: Name mark_tests_working_on_intel_armhf.patch

mark_tests_working_on_intel_mips

Gbp-Pq: Name mark_tests_working_on_intel_mips.patch

mark_tests_working_on_intel_s390x

Gbp-Pq: Name mark_tests_working_on_intel_s390x.patch

mark_tests_working_on_intel

Last-Update Sat, 14 Oct 2017 19:42:59 +0200
Bug-Debian: https://bugs.debian.org/877419
Author: Graham Inggs <ginggs@debian.org>
Last-Update: 2018-04-11

Gbp-Pq: Name mark_tests_working_on_intel.patch

up_print_versions

Gbp-Pq: Name up_print_versions

deb_no_strict_data

Gbp-Pq: Name deb_no_strict_data

deb_skip_sequencelike_on_armel

Gbp-Pq: Name deb_skip_sequencelike_on_armel

deb_disable_googleanalytics

Gbp-Pq: Name deb_disable_googleanalytics

deb_skip_stata_on_bigendians

Gbp-Pq: Name deb_skip_stata_on_bigendians

deb_doc_donotoverride_PYTHONPATH

Gbp-Pq: Name deb_doc_donotoverride_PYTHONPATH