dgit.raspbian.org Git - statsmodels.git/log

Merge version 0.12.2-2+rpi1 and 0.13.1+dfsg-5 to produce 0.13.1+dfsg-5+rpi1

Merge statsmodels (0.13.1+dfsg-5) import into refs/heads/workingbranch

Xfail / increase tolerance on tests

TestMICE and test_mixedlm vary enough with the random state, and
corrpsd is close enough to 0, that this is plausibly a rounding non-bug

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Bug-Debian: https://bugs.debian.org/997081
Forwarded: https://github.com/statsmodels/statsmodels/issues/7911

Gbp-Pq: Name 997081_xfail.patch

Ignore test failures on arm64, warn on mips64el

arm64 - TestZeroInflatedModel_probit convergence issues
armel, mips64el - tests sometimes crash (ignored in d/rules)
Wrong answers have previously been seen on armel, and
could be hidden by the crash

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Bug-Debian: https://bugs.debian.org/968210
Forwarded: no

Gbp-Pq: Name 968210_ignore_tests.patch

Remove code from Stack Overflow and wasteful loop

Stack Overflow content is CC-BY-SA licensed,
which this package is not supposed to be. This snippet may be
too small to be copyrightable, but removing it to be safe.

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Forwarded: no

Gbp-Pq: Name remove_ccbysa_snippet.patch

Allow tests to fail if multiprocessing is not available

This is currently the case on hurd-i386

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Forwarded: no

Gbp-Pq: Name xfail_no_multiprocessing.patch

DynamicFactor test fail on ppc64el and intermittently on armhf

Warn on use and xfail test

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Forwarded: no

Gbp-Pq: Name xfail_dynamicfactor_ppc64el.patch

Markov* broken on armhf

Warn on use, and xfail tests

I suspect https://github.com/statsmodels/statsmodels/pull/5826
but that improved it enough on amd64 that
reverting it isn't a good solution.

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Forwarded: no

Gbp-Pq: Name xfail_regimeswitching_armhf.patch

Fix typos

Origin: lintian
Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Forwarded: no

Gbp-Pq: Name spelling.patch

Use local requirejs/mathjax

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Forwarded: not-needed

Gbp-Pq: Name sphinx_local_requirejs.patch

Avoid NaN crash in test_structural

Out-of-range frequency.cycle starting values make untransform_params return NaN,
which crashes summary()

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Forwarded: no

Gbp-Pq: Name fix_test_bounds.patch

Don't fail documentation build on examples exceptions

If example code outputs an error when run,
ipython (ipython:: blocks) now fails the whole build by default,
and tools/nbgenerate.py (.ipynb files) now leaves out that file
(leaving a broken link in the examples index).

As some examples use downloaded data and are hence expected to be
unrunnable on a Debian buildd, this instead keeps them
(::ipython with error output, .ipynb without output).

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Forwarded: not-needed

Gbp-Pq: Name sphinx_ignore_errors.patch

Don't try to use a theme we don't have

Upstream switched to sphinx_material in
1d7aafad5c3ad634c9ae2122881c1809c2ccbcbe
and Debian doesn't have that theme.

(I haven't investigated packaging it, which might be a better long-term option.)

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Forwarded: not-needed (except maybe the version fix? or is that no longer needed at all?)

Gbp-Pq: Name no_sphinx_material.patch

Make the module reference tables appear

Our numpydoc is old enough to still need this manually set

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Bug: https://github.com/numpy/numpydoc/issues/141
Forwarded: not-needed

Gbp-Pq: Name sphinx_autosummary.patch

Xfail or loosen tolerances on flaky tests

The test_nondiagonal_obs_cov one hasn't yet been seen in Debian
but is known in upstream CI:
https://github.com/statsmodels/statsmodels/pull/6475#issuecomment-581151072

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>, Graham Inggs
Bug-Debian: https://bugs.debian.org/944054
Forwarded: no

Gbp-Pq: Name 944054_flaky_tests.patch

Don't try to write to the source directory

Not allowed in autopkgtest

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Forwarded: no

Gbp-Pq: Name use_tmp_path.patch

Use Python 3 in script shebangs

(Skipping the two .pyx files with #!python - they need to be compiled
with Cython, not directly run with any version of plain Python)

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Forwarded: no

Gbp-Pq: Name python3_shebangs.patch

Loosen tolerances on some tests on i386

and xfail a test that fails for not producing ConvergenceWarning.

Failure logs:
test_smoothing
https://buildd.debian.org/status/fetch.php?pkg=statsmodels&arch=i386&ver=0.9.0-3&stamp=1567157609&raw=0
test_multivariate_switch_univariate
https://buildd.debian.org/status/fetch.php?pkg=statsmodels&arch=i386&ver=0.12.0-1&stamp=1599693472&raw=0

As it only fails on i386 and isn't far wrong,
I suspect different rounding due to x87 excess precision

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Bug-Debian: https://bugs.debian.org/938949
Forwarded: no

Gbp-Pq: Name i386_loosen_test_tolerances.patch

Use example data from an R package we have

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Forwarded: not-needed

Gbp-Pq: Name use_available_data.patch

KalmanFilter broken on armhf / hppa

Warn on use, and xfail the tests

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Bug-Debian: https://bugs.debian.org/924036
Bug-Ubuntu: https://launchpad.net/bugs/1819227
Forwarded: no

Gbp-Pq: Name xfail_kalman_armhf.patch

Use intersphinx inventory files from other Debian packages.

Forwarded: not-needed

Gbp-Pq: Name use-system-inventory

to prevent failed test on i386

Author: Yaroslav Halchenko <debian@onerussian.com>
Bug: https://github.com/statsmodels/statsmodels/issues/1831
Forwarded: upstream consider this probably fixed

Gbp-Pq: Name up_reduce_test_precision

Use cached datasets in tests and examples

Also remove a download that isn't actually used in that example.

This allows the tests to pass, and at least some of the examples to
be built, in an offline environment such as a Debian buildd.

The cached data is extracted from R packages by debian/datasets/*.

Author: Diane Trout <diane@ghic.org>, Rebecca N. Palmer <rebecca_palmer@zoho.com>
Forwarded: not-needed

Gbp-Pq: Name use-cached-datasets

statsmodels (0.13.1+dfsg-5) unstable; urgency=medium

* Warn on import and ignore (crashing) tests on armel (see #968210).

[dgit import unpatched statsmodels 0.13.1+dfsg-5]

Import statsmodels_0.13.1+dfsg-5.debian.tar.xz

[dgit import tarball statsmodels 0.13.1+dfsg-5 statsmodels_0.13.1+dfsg-5.debian.tar.xz]

Merge statsmodels (0.13.1+dfsg-3) import into refs/heads/workingbranch

Xfail / increase tolerance on tests

TestMICE and test_mixedlm vary enough with the random state, and
corrpsd is close enough to 0, that this is plausibly a rounding non-bug

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Bug-Debian: https://bugs.debian.org/997081
Forwarded: https://github.com/statsmodels/statsmodels/issues/7911

Gbp-Pq: Name 997081_xfail.patch

Ignore test failures on arm64, warn on mips64el

arm64 - TestZeroInflatedModel_probit convergence issues
mips64el - tests crash, hence
unknown whether there are any wrong answers (ignored in d/rules)

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Bug-Debian: https://bugs.debian.org/968210
Forwarded: no

Gbp-Pq: Name 968210_ignore_tests.patch

Remove code from Stack Overflow and wasteful loop

Stack Overflow content is CC-BY-SA licensed,
which this package is not supposed to be. This snippet may be
too small to be copyrightable, but removing it to be safe.

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Forwarded: no

Gbp-Pq: Name remove_ccbysa_snippet.patch

Allow tests to fail if multiprocessing is not available

This is currently the case on hurd-i386

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Forwarded: no

Gbp-Pq: Name xfail_no_multiprocessing.patch

DynamicFactor test fail on ppc64el

Warn on use and xfail test

Author: Rebecca N. Palmer <rebecca_palmer@zoho.com>
Forwarded: no

Gbp-Pq: Name xfail_dynamicfactor_ppc64el.patch