From: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Date: Sat, 29 Jul 2017 08:38:27 +0000 (+0100)
Subject: fix-test_vcf_query
X-Git-Tag: archive/raspbian/1.4.1-3+rpi1~1^2~1
X-Git-Url: https://dgit.raspbian.org/?a=commitdiff_plain;h=f5646a8ab06c930153a35b27fd96555fd6fbe5e7;p=bcftools.git

fix-test_vcf_query

Last-Update 2017-07-21

Gbp-Pq: Name fix-test_vcf_query.patch
---

diff --git a/vcfnorm.c b/vcfnorm.c
index 3a1706b..8038be1 100644
--- a/vcfnorm.c
+++ b/vcfnorm.c
@@ -94,7 +94,7 @@ static inline int replace_iupac_codes(char *seq, int nseq)
 }
 static inline int has_non_acgtn(char *seq, int nseq)
 {
-    char *end = nseq ? seq + nseq : seq + UINT32_MAX;   // arbitrary large number
+    char *end = nseq ? seq + nseq : seq + (UINT32_MAX >> 2);   // arbitrary large number
     while ( *seq && seq<end )
     {
         char c = toupper(*seq);