From: Steffen Moeller Date: Thu, 2 Dec 2010 17:36:34 +0000 (+0000) Subject: Seed of a package of blast+ X-Git-Tag: archive/raspbian/2.16.0+ds-7+rpi1~1^2~382 X-Git-Url: https://dgit.raspbian.org/?a=commitdiff_plain;h=e662ab8f084dde1fbb61ac4002c80c72346e0990;p=ncbi-blast%2B.git Seed of a package of blast+ --- e662ab8f084dde1fbb61ac4002c80c72346e0990 diff --git a/debian/README.Debian b/debian/README.Debian new file mode 100644 index 00000000..a3cd3b36 --- /dev/null +++ b/debian/README.Debian @@ -0,0 +1,6 @@ +ncbi-blast-plus for Debian +-------------------------- + + + + -- Steffen Moeller Thu, 02 Dec 2010 18:18:41 +0100 diff --git a/debian/README.source b/debian/README.source new file mode 100644 index 00000000..0c50f26b --- /dev/null +++ b/debian/README.source @@ -0,0 +1,9 @@ +ncbi-blast-plus for Debian +-------------------------- + + + + + + diff --git a/debian/changelog b/debian/changelog new file mode 100644 index 00000000..6c50156a --- /dev/null +++ b/debian/changelog @@ -0,0 +1,5 @@ +ncbi-blast-plus (2.2.24+-1) unstable; urgency=low + + * Initial release (Closes: #nnnn) + + -- Steffen Moeller Thu, 02 Dec 2010 18:18:41 +0100 diff --git a/debian/compat b/debian/compat new file mode 100644 index 00000000..7f8f011e --- /dev/null +++ b/debian/compat @@ -0,0 +1 @@ +7 diff --git a/debian/control b/debian/control new file mode 100644 index 00000000..5dc165e2 --- /dev/null +++ b/debian/control @@ -0,0 +1,15 @@ +Source: ncbi-blast-plus +Section: unknown +Priority: extra +Maintainer: Steffen Moeller +Build-Depends: debhelper (>= 7.0.50~) +Standards-Version: 3.8.4 +Homepage: +#Vcs-Git: git://git.debian.org/collab-maint/ncbi-blast-plus.git +#Vcs-Browser: http://git.debian.org/?p=collab-maint/ncbi-blast-plus.git;a=summary + +Package: ncbi-blast-plus +Architecture: any +Depends: ${shlibs:Depends}, ${misc:Depends} +Description: + diff --git a/debian/copyright b/debian/copyright new file mode 100644 index 00000000..47b25e31 --- /dev/null +++ b/debian/copyright @@ -0,0 +1,37 @@ +This work was packaged for Debian by: + + Steffen Moeller on Thu, 02 Dec 2010 18:18:41 +0100 + +It was downloaded from: + + + +Upstream Author(s): + + + + +Copyright: + + + + +License: + + + +The Debian packaging is: + + Copyright (C) 2010 Steffen Moeller + +# Please chose a license for your packaging work. If the program you package +# uses a mainstream license, using the same license is the safest choice. +# Please avoid to pick license terms that are more restrictive than the +# packaged work, as it may make Debian's contributions unacceptable upstream. +# If you just want it to be GPL version 3, leave the following lines in. + +and is licensed under the GPL version 3, +see "/usr/share/common-licenses/GPL-3". + +# Please also look if there are files or directories which have a +# different copyright/license attached and list them here. diff --git a/debian/docs b/debian/docs new file mode 100644 index 00000000..e69de29b diff --git a/debian/ncbi-blast-plus.cron.d.ex b/debian/ncbi-blast-plus.cron.d.ex new file mode 100644 index 00000000..27422e81 --- /dev/null +++ b/debian/ncbi-blast-plus.cron.d.ex @@ -0,0 +1,4 @@ +# +# Regular cron jobs for the ncbi-blast-plus package +# +0 4 * * * root [ -x /usr/bin/ncbi-blast-plus_maintenance ] && /usr/bin/ncbi-blast-plus_maintenance diff --git a/debian/ncbi-blast-plus.default.ex b/debian/ncbi-blast-plus.default.ex new file mode 100644 index 00000000..874bc825 --- /dev/null +++ b/debian/ncbi-blast-plus.default.ex @@ -0,0 +1,10 @@ +# Defaults for ncbi-blast-plus initscript +# sourced by /etc/init.d/ncbi-blast-plus +# installed at /etc/default/ncbi-blast-plus by the maintainer scripts + +# +# This is a POSIX shell fragment +# + +# Additional options that are passed to the Daemon. +DAEMON_OPTS="" diff --git a/debian/ncbi-blast-plus.doc-base.EX b/debian/ncbi-blast-plus.doc-base.EX new file mode 100644 index 00000000..000d6f7e --- /dev/null +++ b/debian/ncbi-blast-plus.doc-base.EX @@ -0,0 +1,20 @@ +Document: ncbi-blast-plus +Title: Debian ncbi-blast-plus Manual +Author: +Abstract: This manual describes what ncbi-blast-plus is + and how it can be used to + manage online manuals on Debian systems. +Section: unknown + +Format: debiandoc-sgml +Files: /usr/share/doc/ncbi-blast-plus/ncbi-blast-plus.sgml.gz + +Format: postscript +Files: /usr/share/doc/ncbi-blast-plus/ncbi-blast-plus.ps.gz + +Format: text +Files: /usr/share/doc/ncbi-blast-plus/ncbi-blast-plus.text.gz + +Format: HTML +Index: /usr/share/doc/ncbi-blast-plus/html/index.html +Files: /usr/share/doc/ncbi-blast-plus/html/*.html diff --git a/debian/patches/series b/debian/patches/series new file mode 100644 index 00000000..ee758d34 --- /dev/null +++ b/debian/patches/series @@ -0,0 +1 @@ +root_Makefile.patch diff --git a/debian/rules b/debian/rules new file mode 100755 index 00000000..bd86dc34 --- /dev/null +++ b/debian/rules @@ -0,0 +1,25 @@ +#!/usr/bin/make -f +# -*- makefile -*- +# Sample debian/rules that uses debhelper. +# This file was originally written by Joey Hess and Craig Small. +# As a special exception, when this file is copied by dh-make into a +# dh-make output file, you may use that output file without restriction. +# This special exception was added by Craig Small in version 0.37 of dh-make. + +# Uncomment this to turn on verbose mode. +#export DH_VERBOSE=1 + +configure: configure.stamp +configure.stamp: + ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=${prefix}/include + touch $@ + +build: build.stamp +build.stamp: configure.stamp + $(MAKE) + touch $@ + +#%: +# dh $@ + +.PHONY: configure diff --git a/debian/source/format b/debian/source/format new file mode 100644 index 00000000..163aaf8d --- /dev/null +++ b/debian/source/format @@ -0,0 +1 @@ +3.0 (quilt) diff --git a/debian/watch.ex b/debian/watch.ex new file mode 100644 index 00000000..fa81ed70 --- /dev/null +++ b/debian/watch.ex @@ -0,0 +1,23 @@ +# Example watch control file for uscan +# Rename this file to "watch" and then you can run the "uscan" command +# to check for upstream updates and more. +# See uscan(1) for format + +# Compulsory line, this is a version 3 file +version=3 + +# Uncomment to examine a Webpage +# +#http://www.example.com/downloads.php ncbi-blast-plus-(.*)\.tar\.gz + +# Uncomment to examine a Webserver directory +#http://www.example.com/pub/ncbi-blast-plus-(.*)\.tar\.gz + +# Uncommment to examine a FTP server +#ftp://ftp.example.com/pub/ncbi-blast-plus-(.*)\.tar\.gz debian uupdate + +# Uncomment to find new files on sourceforge, for devscripts >= 2.9 +# http://sf.net/ncbi-blast-plus/ncbi-blast-plus-(.*)\.tar\.gz + +# Uncomment to find new files on GooglePages +# http://example.googlepages.com/foo.html ncbi-blast-plus-(.*)\.tar\.gz