From: Peter Michael Green Date: Tue, 31 Jan 2023 13:21:16 +0000 (+0000) Subject: Import pandas_1.5.3+dfsg-1+rpi1.debian.tar.xz X-Git-Tag: archive/raspbian/1.5.3+dfsg-2+rpi1~29^2 X-Git-Url: https://dgit.raspbian.org/?a=commitdiff_plain;h=a25b2c2cb0829f59ea0c961678273fa804baeabc;p=pandas.git Import pandas_1.5.3+dfsg-1+rpi1.debian.tar.xz [dgit import tarball pandas 1.5.3+dfsg-1+rpi1 pandas_1.5.3+dfsg-1+rpi1.debian.tar.xz] --- a25b2c2cb0829f59ea0c961678273fa804baeabc diff --git a/README.source b/README.source new file mode 100644 index 00000000..c60acd4c --- /dev/null +++ b/README.source @@ -0,0 +1,18 @@ +New upstream and contributors_list update (warning: assumes my directory layout): + +#update this: export version=1.5.1 +cd ~/Debian/sourcepkgs/pandas +GBP_CONF_FILES=~/.gbp.conf gbp import-orig --upstream-branch=upstream --debian-branch=main --uscan --pristine-tar +echo "Current to version ${version} (generated by git shortlog -ns)" > debian/contributors_list.txt +echo "There may be multiple entries for the same person if they have used more than one (form of their) name" >> debian/contributors_list.txt +echo "https://github.com/pandas-dev/pandas/graphs/contributors" >> debian/contributors_list.txt +echo "" >> debian/contributors_list.txt +cd ~/Debian/upstreams/pandas +git pull +git checkout v${version} +git shortlog -ns >> ~/Debian/sourcepkgs/pandas/debian/contributors_list.txt +git checkout main +cd ~/Debian/sourcepkgs/pandas +echo "" >> debian/contributors_list.txt +echo "Debian packaging" >> debian/contributors_list.txt +git shortlog -ns -- debian >> debian/contributors_list.txt diff --git a/changelog b/changelog new file mode 100644 index 00000000..36f518e6 --- /dev/null +++ b/changelog @@ -0,0 +1,1554 @@ +pandas (1.5.3+dfsg-1+rpi1) bookworm-staging; urgency=medium + + * Disable testsuite. + * Disable documentation build. + * Partiallly fix clean target. + + -- Peter Michael Green Tue, 31 Jan 2023 13:21:16 +0000 + +pandas (1.5.3+dfsg-1) unstable; urgency=medium + + * Upstream bugfix release. Update copyright and patches. + * Tests: ignore plot rounding errors. (Closes: #1029251) + * Tests: re-enable dask test, ignore numpy 1.24 warning. + * Docs: re-enable style.ipynb. + + -- Rebecca N. Palmer Sun, 22 Jan 2023 11:54:30 +0000 + +pandas (1.5.2+dfsg-6) unstable; urgency=medium + + * Move xarray to Build-Depends-Indep to break circular dependency. + + -- Rebecca N. Palmer Wed, 11 Jan 2023 07:34:28 +0000 + +pandas (1.5.2+dfsg-5) unstable; urgency=medium + + * Fix or ignore warnings from numpy 1.24. + * Stop ignoring tests on mips*, thanks to Adrian Bunk. + + -- Rebecca N. Palmer Tue, 10 Jan 2023 20:48:34 +0000 + +pandas (1.5.2+dfsg-4) unstable; urgency=medium + + * Add dask transition Breaks (see #1025393). + * Don't try to load intersphinx links from python-numpy-doc, + as it no longer exists. + * Upload to unstable. (Closes: #1023965, #1022571) + + -- Rebecca N. Palmer Mon, 09 Jan 2023 19:45:45 +0000 + +pandas (1.5.2+dfsg-3) experimental; urgency=medium + + * Tests: ignore a numpy warning. + + -- Rebecca N. Palmer Sat, 07 Jan 2023 10:09:11 +0000 + +pandas (1.5.2+dfsg-2) experimental; urgency=medium + + * Fix date_range overflow in 32-bit. (Closes: #1026351) + * Don't try to load intersphinx links from python-matplotlib-doc, + as it no longer exists. (Closes: #1027576) + * Re-enable parso-using tests (as #1023896 has been fixed). + * Bump Standards-Version to 4.6.2 (no changes needed). + + -- Rebecca N. Palmer Fri, 06 Jan 2023 21:36:03 +0000 + +pandas (1.5.2+dfsg-1) experimental; urgency=medium + + * Upstream bugfix release. Update contributors_list. + * Fix Lintian typo. + * Xfail parso-using tests (workaround for #1023896). + * Temporarily drop numba test-depends (skips tests), + as it is uninstallable due to #1024795. + * Add transition Breaks (see #1022571). + + -- Rebecca N. Palmer Wed, 30 Nov 2022 21:48:47 +0000 + +pandas (1.3.5+dfsg-6) unstable; urgency=medium + + * Team upload + * Ignore test failures for first build with Python 3.11, + see #1023965 + + -- Graham Inggs Sun, 13 Nov 2022 10:36:51 +0000 + +pandas (1.5.1+dfsg-3) experimental; urgency=medium + + * Revert minimum Cython version. + * Tests: fix another little-endian assumption. + * Silence some Lintian messages. + + -- Rebecca N. Palmer Thu, 10 Nov 2022 21:36:53 +0000 + +pandas (1.5.1+dfsg-2) experimental; urgency=medium + + * Tests: xfail rolling.var/std rounding error on i386, + don't assume little-endian, + re-disable some SQL tests our setup blocks. + * Temporarily lower minimum Cython version (see LP#1995992). + + -- Rebecca N. Palmer Wed, 09 Nov 2022 21:17:44 +0000 + +pandas (1.5.1+dfsg-1) experimental; urgency=medium + + * New upstream release. Update copyright and patches. + * Include more of the optional test-depends, for more test coverage. + * Update minimum dependency versions. + * Docs: update Sphinx extension dependencies, + use pydata theme but disable analytics (for privacy) and + features requiring dependencies we don't have. + * Tests: use the upstream mechanism to skip non-CI-friendly + (e.g. excessively resource-heavy) tests. + + -- Rebecca N. Palmer Mon, 07 Nov 2022 21:02:49 +0000 + +pandas (1.4.3+dfsg-6) experimental; urgency=medium + + * Fix NaT bug introduced by previous patch. + + -- Rebecca N. Palmer Wed, 24 Aug 2022 22:01:26 +0100 + +pandas (1.4.3+dfsg-5) experimental; urgency=medium + + * Fix bounds checking in float-to-datetime conversion. + + -- Rebecca N. Palmer Tue, 23 Aug 2022 22:24:15 +0100 + +pandas (1.4.3+dfsg-4) experimental; urgency=medium + + * Tests: skip another s390x numba issue, new riscv64 date error test. + + -- Rebecca N. Palmer Mon, 22 Aug 2022 22:25:08 +0100 + +pandas (1.4.3+dfsg-3) experimental; urgency=medium + + * Don't warn on non-x86 NaN->datetime cast, + as this has been fixed in numpy (#877754). + * Tests: fix architecture detection, skip another s390x numba crash, + extend hurd_compat.patch, more output around riscv64 date errors. + * Add transition Breaks (see #1017809). + + -- Rebecca N. Palmer Sun, 21 Aug 2022 18:13:03 +0100 + +pandas (1.4.3+dfsg-2) experimental; urgency=medium + + * Tests: don't assume little-endian, + don't try to cast pytz version to float, + ignore a missing numpy warning on armel. + + -- Rebecca N. Palmer Sat, 20 Aug 2022 10:32:58 +0100 + +pandas (1.4.3+dfsg-1) experimental; urgency=medium + + * New upstream release. Update copyright and patches. + * Upload to experimental, due to potential breakage. + * Remove xlwt Recommends. + * Update build/test-Depends. + * Re-enable numba (see #1000336). + * Update README.source. + * Update Lintian override format (see #1007002). + * Tests: add a searchable failure message to crashes/errors, + be less verbose so the log fits in the Salsa CI size limit, + remove a now-useless xlrd test, xfail some tests on 32-bit. + * Bump Standards-Version to 4.6.1 (no changes needed). + * Show the numba non-x86 warning on more (all?) numba uses. + * Drop stable_test_urls.patch. + + -- Rebecca N. Palmer Wed, 27 Jul 2022 22:17:33 +0100 + +pandas (1.3.5+dfsg-5) unstable; urgency=medium + + * Fix FTBFS with Sphinx 5. (Closes: #1013375) + + -- Rebecca N. Palmer Sun, 26 Jun 2022 15:06:07 +0100 + +pandas (1.3.5+dfsg-4) unstable; urgency=medium + + * Temporarily skip numba tests. (Closes: #1008179) + + -- Rebecca N. Palmer Fri, 25 Mar 2022 20:57:26 +0000 + +pandas (1.3.5+dfsg-3) unstable; urgency=medium + + * Tests: be compatible with new fsspec. (Closes: #1006170) + * Re-enable numba tests. + * Fix pyversions call. + * Enable Salsa CI. + * Update Lintian overrides. + + -- Rebecca N. Palmer Mon, 21 Feb 2022 07:35:51 +0000 + +pandas (1.3.5+dfsg-2) unstable; urgency=medium + + * Temporarily skip numba tests (see LP#1951814). + + -- Rebecca N. Palmer Fri, 28 Jan 2022 19:22:53 +0000 + +pandas (1.3.5+dfsg-1) unstable; urgency=medium + + * Upstream bugfix release. Update contributors_list. + * Refresh patches, drop patches no longer needed. + * d/watch: Ignore RC versions. + * Docs: Add missing mathjax dependency. + + -- Rebecca N. Palmer Tue, 11 Jan 2022 21:25:17 +0000 + +pandas (1.3.4+dfsg-7) unstable; urgency=medium + + * Team upload. + * Disable more numba tests on 32bit archs + + -- Jochen Sprickerhof Thu, 02 Dec 2021 17:32:54 +0100 + +pandas (1.3.4+dfsg-6) unstable; urgency=medium + + * Team upload. + * Fix an other import in the test patch + * Add closes bug to old changelog + + -- Jochen Sprickerhof Wed, 01 Dec 2021 10:36:56 +0100 + +pandas (1.3.4+dfsg-5) unstable; urgency=medium + + * Team upload. + * Fix missing import + * Remove unused salsa-ci.yml + + -- Jochen Sprickerhof Tue, 30 Nov 2021 23:39:49 +0100 + +pandas (1.3.4+dfsg-4) unstable; urgency=medium + + * Tests: remove another 64 bit assumption. + * Warn the user and ignore all tests on mips*. + + -- Rebecca N. Palmer Tue, 30 Nov 2021 10:11:08 +0000 + +pandas (1.3.4+dfsg-3) unstable; urgency=medium + + * Tests: remove some more 64 bit or x86-or-arm64 assumptions. + * Docs: add missing MathJax.js symlink, remove unused URL replacement. + * Add transition Breaks (see #999415). + * Upload to unstable. (Closes: #999415) + + -- Rebecca N. Palmer Mon, 29 Nov 2021 21:59:11 +0000 + +pandas (1.3.4+dfsg-2) experimental; urgency=medium + + * Stop ignoring build-time tests. + * Tests: don't assume 64 bit or x86-or-arm64. + * Fix #877754 warning. + * Xfail more numba tests on big-endian systems. + * Skip test_statsmodels during build to break dependency cycle. + + -- Rebecca N. Palmer Thu, 25 Nov 2021 22:04:47 +0000 + +pandas (1.3.4+dfsg-1) experimental; urgency=medium + + [ Andreas Tille ] + * Fix watchfile to detect new versions on github + * New upstream version (Closes: #1000422) + * Standards-Version: 4.6.0 (routine-update) + * Respect DEB_BUILD_OPTIONS in override_dh_auto_test target (routine- + update) + * Remove trailing whitespace in debian/copyright (routine-update) + * Add salsa-ci file (routine-update) + * Set upstream metadata fields: Bug-Submit, Repository, Repository-Browse, + Security-Contact. + * Remove obsolete field Name from debian/upstream/metadata (already present in + machine-readable debian/copyright). + * Apply multi-arch hints. + + python-pandas-doc: Add Multi-Arch: foreign. + * Remove hidden files and directories that are confusing gbp + * drop tag definitions from debian/gbp.conf + + [ Rebecca N. Palmer ] + * Upload to experimental (see #999415). + * Update contributors_list and d/copyright. + * Refresh patches, remove no longer needed patches. + * Update minimum dependency versions. + * Re-enable xlrd and numba tests (#976620 and #972246 have ben fixed). + * Temporarily disable failing style.ipynb build. + * Tests: accept changed error messages, add new dependency, + skip/xfail tests that our test setup breaks, clean up afterwards. + * Temporarily ignore build-time tests to get a first build. + * Be compatible with matplotlib 3.5. + + -- Rebecca N. Palmer Sun, 21 Nov 2021 21:04:26 +0000 + +pandas (1.1.5+dfsg-2) unstable; urgency=medium + + * Remove dead URL from tests/examples. (Closes: #979621) + * Mark autopkgtest needs-internet. + * Revert "Print uname etc during build". + * Mark matplotlib nocheck/nodoc and allow building on ports without + matplotlib or numexpr. (Closes: #977470) + * Add python3-tabulate build/test-depends. + * Add bottleneck and numexpr test-depends. + * Tests: don't require warnings that jedi no longer produces. + + -- Rebecca N. Palmer Tue, 12 Jan 2021 21:06:04 +0000 + +pandas (1.1.5+dfsg-1) unstable; urgency=medium + + * Upstream bugfix release. Refresh patches, contributors_list. + * Default to openpyxl not xlrd in read_excel, and skip xlrd tests, + as xlrd fails if defusedxml is installed (#976620). + * Skip numba tests, and not other rolling.apply tests, on s390x. + (LP: #1901860) + * Tests: on 32 bit systems, avoid time input that overflows. + * Print uname etc during build (test for #973854). + * Bump Standards-Version to 4.5.1 (no changes needed). + + -- Rebecca N. Palmer Mon, 07 Dec 2020 23:06:28 +0000 + +pandas (1.1.4+dfsg-1) unstable; urgency=medium + + * Upstream bugfix release. Refresh patches, contributors_list. + * Remove numba test-depends (skips tests). (Closes: #973589) + * Loosen pandas-lib->pandas Depends versioning. (Closes: #973289) + + -- Rebecca N. Palmer Wed, 04 Nov 2020 18:36:11 +0000 + +pandas (1.1.3+dfsg-2) unstable; urgency=medium + + * Tests: re-xfail an intermittent instance of #877419. + * Remove no longer needed test_statsmodels xfail. + * Fix invalid test skips. + + -- Rebecca N. Palmer Thu, 22 Oct 2020 07:14:29 +0100 + +pandas (1.1.3+dfsg-1) unstable; urgency=medium + + * Upstream bugfix release. Refresh patches, contributors_list. + * Remove outdated README.source, + add contributors_list update process. + * Fix invalid test xfail. + * Re-add mistakenly removed non-x86 test xfails. + * Declare transition Breaks (see #969650). + * Skip another test if multiprocessing is not available. + * Update cython3 Depends. + * Fix pytables expression bug with Python 3.9. (Closes: #972015) + * Allow test_statsmodels to fail on 3.9 to break bootstrap cycle. + * Upload to unstable. (Closes: #969650) + + -- Rebecca N. Palmer Sun, 18 Oct 2020 16:22:36 +0100 + +pandas (1.1.1+dfsg-3) experimental; urgency=medium + + * Remove no longer needed test xfails. + * Xfail some more non-x86 numba tests and a new instance of #877419. + * Skip test_register_entrypoint during build. + * Tests: don't assume little-endian. + + -- Rebecca N. Palmer Thu, 03 Sep 2020 08:01:24 +0100 + +pandas (1.1.1+dfsg-2) experimental; urgency=medium + + * Unconditionally build-depend on sphinx-common (for dh_sphinxdoc). + * Re-enable but ignore another potentially crashing non-x86 test. + + -- Rebecca N. Palmer Tue, 01 Sep 2020 08:17:32 +0100 + +pandas (1.1.1+dfsg-1) experimental; urgency=medium + + * New upstream release. + * Upload to experimental. + * Drop/refresh patches. Update d/copyright and contributors_list. + * Re-enable asyncio tests. + * Skip fsspec tests while it is too old a version. + * Fix plot test cleanup (upstream bug 35080). + * Skip test that is expected to fail in our setup. + * Update minimum dependency versions. + * Use dh_sphinxdoc. + * Re-enable but ignore potentially crashing non-x86 tests. + * Simplify d/rules, mostly by using pybuild more. + + -- Rebecca N. Palmer Mon, 31 Aug 2020 18:44:39 +0100 + +pandas (1.0.5+dfsg-3) unstable; urgency=medium + + * Remove pytest-asyncio test-depends. + * Remove numba test-depends on non-x86: at least s390x crashes. + + -- Rebecca N. Palmer Wed, 26 Aug 2020 22:34:50 +0100 + +pandas (1.0.5+dfsg-2) unstable; urgency=medium + + * Fix missing import and update numba submodule name in patches. + * Disable asyncio tests (workaround for #969050). + * Warn that numba may give wrong answers on non-x86, + and remove test-depends on mipsel. + * Skip a crashing test on s390x. + + -- Rebecca N. Palmer Wed, 26 Aug 2020 20:19:16 +0100 + +pandas (1.0.5+dfsg-1) unstable; urgency=medium + + * Upstream bugfix release. Refresh patches, contributors_list. + * Fix invalid test xfails. + * Only Recommend numba on amd64, to reduce the risk of bugs. + * Don't test-depend on numba on ppc64el (where it crashes, #863511?) + or on ports architectures (where it mostly isn't available). + * Remove no longer needed test xfails/skips. + * Upload to unstable. (Closes: #950430) + + -- Rebecca N. Palmer Tue, 25 Aug 2020 20:07:50 +0100 + +pandas (0.25.3+dfsg2-5) unstable; urgency=medium + + * Tests: ignore rounding difference on i386. (Closes: #968208) + + -- Rebecca N. Palmer Sun, 16 Aug 2020 20:09:14 +0100 + +pandas (0.25.3+dfsg2-4) unstable; urgency=medium + + * Be compatible with matplotlib 3.3. (Closes: #966393) + * Docs: fix broken remote->local Javascript replacement. + + -- Rebecca N. Palmer Sun, 09 Aug 2020 22:11:25 +0100 + +pandas (0.25.3+dfsg2-3) unstable; urgency=medium + + * Nested DataFrames may raise ValueError with numpy 1.19 + (upstream bug 32289). Clarify error message and xfail tests. + * Stop using a no-longer-existing numpy constant. + * Tests: ignore deprecations/rewordings and avoid setup exception + with numpy 1.19. (Together, the above Closes: #963817) + * Bump debhelper compat to 13. + * Fix HDFStore.flush (part of #877419) on s390x. + * Add NEWS.html.gz for Standards-Version 4.5.0. + (Choosing not to also add NEWS.gz as it would be large.) + * Tests: accept Hurd's errno and lack of multiprocessing. + * Docs: replace embedded Javascript copies with links. + + -- Rebecca N. Palmer Sun, 28 Jun 2020 21:47:22 +0100 + +pandas (1.0.4+dfsg-1) experimental; urgency=medium + + * Upstream bugfix release. (Closes: #962335) + * Refresh patches, update contributors_list. + * Fix broken tests. + * Tests: allow numba to raise an error on 32 bit systems. + * Don't test-depend on numba on armel (where it crashes, + possibly #863508) or ppc64/riscv64 (where it isn't available). + * Xfail some more HDF5 tests on big-endian architectures. + + -- Rebecca N. Palmer Tue, 09 Jun 2020 22:19:23 +0100 + +pandas (0.25.3+dfsg2-2) unstable; urgency=medium + + * Tests: don't fail on jedi deprecation warnings. + + -- Rebecca N. Palmer Thu, 07 May 2020 11:57:06 +0100 + +pandas (1.0.3+dfsg2-1) experimental; urgency=medium + + * Upstream bugfix release, update contributors_list. + * Merge packaging from unstable, + but omit no longer needed clipboard warn/xfail. + * Only show the NaN -> datetime warning from float dtypes + (to avoid an exception while trying to check). + * Recommend numba, as we now have a recent enough version. + * Re-add dask test-dependency. + * Clarify non-x86 warnings, remove no longer needed xfails / ignores. + * Clean up whitespace and patch names/descriptions. + * Remove patches no longer needed. + * Network tests: use more stable URLs. + + -- Rebecca N. Palmer Wed, 06 May 2020 17:07:44 +0100 + +pandas (0.25.3+dfsg2-1) unstable; urgency=medium + + * Remove inconveniently licensed (CC-BY-SA) snippets. + * Fix (harmless) SyntaxWarning on install. (Closes: #956021) + * Fix NaT sort order and test failures with numpy 1.18. + (Closes: #958531) + + -- Rebecca N. Palmer Wed, 06 May 2020 12:18:23 +0100 + +pandas (0.25.3+dfsg-9) unstable; urgency=medium + + * Don't raise on import without matplotlib installed. Add test of this. + + -- Rebecca N. Palmer Fri, 03 Apr 2020 21:56:02 +0100 + +pandas (0.25.3+dfsg-8) unstable; urgency=medium + + * Tests: don't fail on harmless changes in dependencies. (Closes: #954647) + + -- Rebecca N. Palmer Thu, 02 Apr 2020 18:53:32 +0100 + +pandas (0.25.3+dfsg-7) unstable; urgency=medium + + * Fix another test failure due to our warnings. + * Skip rather than xfail crashing tests. + + -- Rebecca N. Palmer Wed, 26 Feb 2020 18:45:58 +0000 + +pandas (0.25.3+dfsg-6) unstable; urgency=medium + + * Don't fail tests on our own warnings. + * Xfail some more HDF tests on non-x86 architectures. + * Warn that clipboard I/O is broken on big-endian architectures + and xfail test. + * Use pytest-forked to isolate (already xfailed) crashing test. + * Xfail tests that use no-longer-existing URLs. + + -- Rebecca N. Palmer Wed, 26 Feb 2020 07:40:25 +0000 + +pandas (0.25.3+dfsg-5) unstable; urgency=medium + + * Backport packaging from experimental: + - Remove unnecessary test skips, and reorganize remaining ones. + - Use xfails instead of skips. + - Add warnings for the known non-x86 breakages + (NaN -> datetime #877754, HDF and Stata I/O #877419). + - Tell I/O tests where to find the source tree's test data + instead of skipping them. + - Stop using deprecated envvar/tag names. + - Use https for links where available. + + -- Rebecca N. Palmer Mon, 24 Feb 2020 22:38:26 +0000 + +pandas (1.0.1+dfsg-1) experimental; urgency=medium + + * Upstream bugfix release. + * Refresh patches. + * Update and sort d/copyright, update contributors_list. + * Re-enable checking the test suite. + * Declare transition Breaks (see #950430). + * Add jinja2 recommends/test-depends. + * Fix test_to_numpy failure on big-endian systems. + * Register documentation in doc-base. (Closes: #879226) + * Remove no longer needed test xfails/skips, + and reorganize the remaining ones. + * Tell I/O tests where to find the source tree's test data + instead of skipping them. + * Enable multiarch. + * Temporarily drop dask test-dependency to avoid uninstallability. + * Add warnings for the known non-x86 breakages + (NaN -> datetime #877754, HDF and Stata I/O #877419). + + -- Rebecca N. Palmer Sun, 23 Feb 2020 17:13:08 +0000 + +pandas (1.0.0+dfsg-1) experimental; urgency=medium + + * New upstream release. + * Upload to experimental, as this is an API break (see #950430). + * Drop patches applied upstream, refresh others. + * Update and improve d/copyright, update contributors_list. + * Xfail a test that fails in the C locale. + * Update and organize depends/recommends. + * Docs: use a sphinx theme we have, fix spelling, + link to rather than embed remote resource, + use https links where available. + * Stop using deprecated envvar/tag names. + * Xfail rather than skip previously broken tests, + and put the condition in the patch not d/rules or d/tests. + * Remove no longer used patch-stamp. + * Temporarily ignore the test suite to get a first build. + + -- Rebecca N. Palmer Sun, 02 Feb 2020 21:04:36 +0000 + +pandas (0.25.3+dfsg-4) unstable; urgency=medium + + * No-change upload to unstable. (Closes: #937236, #931557) + + -- Rebecca N. Palmer Sun, 10 Nov 2019 16:35:41 +0000 + +pandas (0.25.3+dfsg-3) experimental; urgency=medium + + * Fix autopkgtest. + + -- Rebecca N. Palmer Sat, 09 Nov 2019 10:29:47 +0000 + +pandas (0.25.3+dfsg-2) experimental; urgency=medium + + * Split up the test suite to fit in memory on mipsel, + and stop ignoring it there. (Closes: #943732) + * Reproducibility: use correct path for stripping docs. + * Declare transition Breaks (see #931557). + * Tests: ignore warning from Python 3.8. + * Update d/copyright (some files have moved). + * Use local requirejs. + + -- Rebecca N. Palmer Fri, 08 Nov 2019 07:56:16 +0000 + +pandas (0.25.3+dfsg-1) experimental; urgency=medium + + * Upstream bugfix release. + * Drop patch no longer needed. + * Update autopkgtest dependencies, drop unused link. + * Better document test skips, remove unnecessary ones. + * Reproducibility: strip timestamps and build paths, + use fixed random seeds for building documentation. + * Ignore test suite on mipsel. + + -- Rebecca N. Palmer Sat, 02 Nov 2019 22:26:31 +0000 + +pandas (0.25.2+dfsg-2) experimental; urgency=medium + + * Correct path for contributors list, and don't fail when + not building the -doc package. + * Try again to fix test failure due to deb_nonversioneer_version. + * Skip some failing tests on non-Intel (see #943732), + require other tests to pass. + * Fix another typo. + + -- Rebecca N. Palmer Mon, 28 Oct 2019 22:06:10 +0000 + +pandas (0.25.2+dfsg-1) experimental; urgency=medium + + [ Graham Inggs ] + * Skip python2 test_register_by_default on s390x + * Fix python2 test failures in certain locales + + [ Yaroslav Halchenko ] + * Recent upstream release + * Updated patches + * Adjusted for the gone ci/print_versions + * d/control + - added python{,3}-hypothesis to b-depends + + [ Rebecca N. Palmer ] + * New upstream release. + * Upload to experimental, as this is an API break (see #931557). + * Drop patches fixed upstream, refresh others. + * Remove Python 2 packages (see #937236). + * Use Python 3 in shebangs and subprocess calls. + * Re-enable building on Python 3.8. + * Use the new location of print_versions. + * Skip feather tests and remove build-dependency: + they now need pyarrow.feather, which isn't in Debian. + * Don't fail tests for our versioneer removal + or a differently worded error message. + * Add/update minimum dependency versions. + * Add numpydoc, nbconvert and pytest-xdist build-depends. + * Update d/copyright. + * Pre-generate a contributor list to avoid needing the git log + at build time (when it won't exist). + * Allow tests to fail for now. + + -- Rebecca N. Palmer Mon, 28 Oct 2019 07:53:21 +0000 + +pandas (0.23.3+dfsg-8) unstable; urgency=medium + + * Examples dependencies: re-add statsmodels and xarray; + also add rpy2 and feather. + * Use packaged intersphinx indexes. (Closes: #876417) + * Use https for intersphinx links. + * Remove cythonized-files*. (They are regenerated on each build.) + * Remove test xfail, as statsmodels has now been fixed. + * Set Rules-Requires-Root: no. + * Make documentation Suggest the Python 3 version. + * Suggest statsmodels. + * Only use Python 3 sphinx, and mark it -Indep/nodoc. + * Bump debhelper compat to 12 and use debhelper-compat and pybuild. + * Remove pycompat and X-Python*-Version. + * Add missing d/copyright item. + * Remove obsolete TODOs. + * Clarify descriptions. + * Stop referring to examples that no longer exist. + * Fix typos. + * Remove old (no longer used) EXCLUDE_TESTS*. + * Deduplicate documentation files. + * Use Python 3 shebangs, and fix broken shebang. + * Add python3-ipykernel, -ipywidgets, -seaborn to + Build-Depends-Indep. + * Disable dh_auto_test: it fails, and we run the tests elsewhere. + * Mark test dependencies nocheck/nodoc. + * Remove old minimum versions / alternative dependencies. + * Build-depend on dh-python. + * Don't build on python3.8, as it will fail tests (see #931557). + + -- Rebecca N. Palmer Sun, 27 Oct 2019 11:38:37 +0000 + +pandas (0.23.3+dfsg-7) unstable; urgency=medium + + * Revert test patch and use an xfail instead. + * Temporarily drop statsmodels+xarray Build-Depends, as they are + uninstallable until this is built. + * Add python3-xarray to autopkgtest Depends. + * Drop Python 2 autopkgtest (but keep build-time test). + * Remove duplicate Recommends. + + -- Rebecca N. Palmer Fri, 20 Sep 2019 08:01:37 +0100 + +pandas (0.23.3+dfsg-6) unstable; urgency=medium + + * Team upload + * Avoid FTBFS with statsmodels 0.9.0 + * Add python3-statsmodels to autopkgtest Depends + + -- Graham Inggs Wed, 18 Sep 2019 13:46:01 +0000 + +pandas (0.23.3+dfsg-5) unstable; urgency=medium + + * Team upload + * Add locales-all to Build-Depends and autopkgtest Depends in order to + consistently test in all avalable locales + * Add crh_UA to skip_noencoding_locales.patch + * Fix wrong debian/source/options exclude, thanks Steve Langasek + + -- Graham Inggs Wed, 18 Sep 2019 05:57:44 +0000 + +pandas (0.23.3+dfsg-4) unstable; urgency=medium + + * Add self to Uploaders. + * Recommend .xls format support also in Python 3. (Closes: #880125) + * Tests: don't call fixtures, as this is an error in pytest 4+. + * Don't test datetime in locales with no encoding. + (These are broken by a Python stdlib bug.) + + -- Rebecca N. Palmer Sat, 14 Sep 2019 16:37:43 +0100 + +pandas (0.23.3+dfsg-3) unstable; urgency=medium + + * Team upload. + * Make np.array @ Series act the right way round. (Closes: #923708) + * Replace #918206 fix with a fix that doesn't change the return type + and inplace-ness of np.array += DataFrame. (Closes: #923707) + * Fix missing page in documentation. + + -- Rebecca N. Palmer Wed, 06 Mar 2019 22:19:34 +0000 + +pandas (0.23.3+dfsg-2) unstable; urgency=medium + + * Team upload. + * Don't fail the build on +dfsg versions. + * Fix another d/copyright issue. + * Add d/upstream/metadata. + + -- Rebecca N. Palmer Sat, 02 Mar 2019 14:57:12 +0000 + +pandas (0.23.3+dfsg-1) unstable; urgency=medium + + * Team upload. + * Fix DataFrame @ np.array matrix multiplication. (Closes: #918206) + * Fix documentation build (Sphinx now defaults to Python 3). + (Closes: #804552, LP: #1803018) + * Add documentation examples dependencies. + * Update d/copyright. + * Remove unlicensed files. + + -- Rebecca N. Palmer Fri, 01 Mar 2019 23:02:18 +0000 + +pandas (0.23.3-1) unstable; urgency=medium + + * New upstream release + * debian/patches + - many upstreamed patches are removed and others refreshed + + -- Yaroslav Halchenko Sat, 28 Jul 2018 00:39:32 -0400 + +pandas (0.22.0-8) unstable; urgency=medium + + * Team Upload. + * patches: + + Add patch: deb_dont_call_py2_in_py3_test.patch + During python3 unit test, command 'python' is called by one of + the tests. When there is no python2 installation, tests such as + autopkgtest would fail. + * Put the conditionally applied patch to series' comment to avoid + lintianW: patch-file-present-but-not-mentioned-in-series. + * Trying to fix the autopkgtest: + + Leave a comment about the way to run unittest in the test control file. + + Synchronize B-D and autopkgtest depends. + + Allow output to stderr during test. + * Switch from nosetest to pytest. + * Synchronize pytest argument for rules and autopkgtest. + - Replace tests/unittest with the symlink pointed to tests/unittest3. + That scripts is smart enough to tell from py2 and py3, so we won't + need to write the same thing twice. + - Filter out intel tests on non-x86 architectures. + - Only enable "slow" tests on (Debian + x86) tester. "slow" tests may + consume too much memory to cause memory error or trigger OOM killer. + * control: + + Add missing python3 dependencies and sort the B-D list. + * Point Vcs-* fields to Salsa. + * Update Homepage to https://pandas.pydata.org/ . + * rules: + * Reverse the architecture filtering logic. + * Disable "slow" tests during build for non-x86 architectures. + This may significantly reduce the build time on those weak architectures. + * Don't specify the pytest marker expression twice. + The first expression will be overridden. + * Fix hardening flags. + - Cleanup the mess of unused nosetest exclusion expressions. + * Update lintian overrides. + + Override source-is-missing error, which is a false-positive triggered + by insane-line-length-in-source-file. + + Override insane-line-length-in-source-file because we have nothing + todo with lenghy lines in html. + * TODO: Point out that the unittest speed can be boosted with pytest-xdist. + + -- Mo Zhou Sun, 17 Jun 2018 16:01:16 +0000 + +pandas (0.22.0-7) unstable; urgency=medium + + * Team Upload. + + [ Mo Zhou ] + * Remove patch: deb_fix_test_failure_test_basic_indexing, which is + unneeded for pandas >= 0.21 . (Closes: #900061) + + [ Graham Inggs ] + * Add riscv64 to the list of "not intel" architectures + * Update mark_tests_working_on_intel_armhf.patch + + -- Graham Inggs Tue, 29 May 2018 13:50:59 +0000 + +pandas (0.22.0-6) unstable; urgency=medium + + * Team upload + * Fix FTBFS with Sphinx 1.7, thanks Dmitry Shachnev! + + -- Graham Inggs Tue, 24 Apr 2018 19:09:20 +0000 + +pandas (0.22.0-5) unstable; urgency=medium + + * Team upload + * Add compatibility with Matplotlib 2.2 (Closes: #896673) + + -- Graham Inggs Mon, 23 Apr 2018 13:56:12 +0000 + +pandas (0.22.0-4) unstable; urgency=medium + + * Team upload + * Fix more tests expecting little-endian results + * Fix heap corruption in read_csv on 32-bit, big-endian architectures + (Closes: #895890) + + -- Graham Inggs Sun, 22 Apr 2018 21:48:27 +0000 + +pandas (0.22.0-3) unstable; urgency=medium + + * Team upload + * Refresh and re-enable mark_tests_working_on_intel.patch + * Fix test__get_dtype tests expecting little-endian results + + -- Graham Inggs Thu, 12 Apr 2018 11:04:21 +0000 + +pandas (0.22.0-2) unstable; urgency=medium + + * debian/patches + - as upstream moved over to pytest from nose, no more nose imports were + in the code. Just adjusted patches to import nose where needed + * debian/rules + - specify LC_ALL=C locale to avoid crash while building docs + - add the 0001-TST-pytest-deprecation-warnings-GH17197-17253-reversed.patch + to the series if building on a system with an old pytest + + -- Yaroslav Halchenko Wed, 21 Feb 2018 23:44:58 -0500 + +pandas (0.22.0-1) unstable; urgency=medium + + * Upstream release + * debian/patches + - refreshed many + - updated some + - added + - up_moto_optional to skip tests requiring moto (#777089) + - deb_skip_difffailingtests to skip two failing tests + (see https://github.com/pandas-dev/pandas/issues/19774) + - up_xlwt_optional to skip a test requiring xlwt + - deb_ndsphinx_optional to make nbsphinx optional. + Make nbsphinx not required in build-depends on systems with + older python-sphinx + - mark_tests_failing_on_386.patch + see https://github.com/pandas-dev/pandas/issues/19814 + - removed adopted upstream: + - dateutil-2.6.1-fixed-ambiguous-tz-dst-be.patch + - up_tst_np_argsort_comparison2 + - disabled for now: + - mark_tests_working_on_intel.patch + - up_tst_dont_assert_that_a_bug_exists_in_numpy + + -- Yaroslav Halchenko Wed, 21 Feb 2018 10:30:06 -0500 + +pandas (0.20.3-11) unstable; urgency=medium + + * Team upload. + * Cherry-pick upstream commit 5f2b96bb637f6ddeec169c5ef8ad20013a03c853 + to workaround a numpy bug. (Closes: #884294) + + patches/up_tst_dont_assert_that_a_bug_exists_in_numpy + * Cherry-pick upstream commits to fix test failure caused by test_argsort(). + + patches/up_tst_np_argsort_comparison2 + * Workaround test failure of test_basic_indexing() in file + pandas/tests/series/test_indexing.py . + + patches/deb_fix_test_failure_test_basic_indexing + + -- Mo Zhou Sat, 20 Jan 2018 09:00:31 +0000 + +pandas (0.20.3-10) unstable; urgency=medium + + * Team upload. + * Exclude more tests failing on mips, armhf and powerpc + + -- Andreas Tille Tue, 24 Oct 2017 21:26:02 +0200 + +pandas (0.20.3-9) unstable; urgency=medium + + * Team upload. + * Add missing "import pytest" to two patched tests + * Secure URI in watch file + + -- Andreas Tille Tue, 24 Oct 2017 08:18:54 +0200 + +pandas (0.20.3-8) unstable; urgency=medium + + * Team upload. + * Exclude one more test and de-activate non-working ignore of test errors + + -- Andreas Tille Mon, 23 Oct 2017 21:32:24 +0200 + +pandas (0.20.3-7) unstable; urgency=medium + + * Team upload. + * debhelper 9 + * Use Debian packaged mathjax + * Do not Recommends python3-six since it is mentioned in Depends + * Remove redundant/outdated XS-Testsuite: autopkgtest + * Exclude one more test and de-activate non-working ignore of test errors + + -- Andreas Tille Mon, 23 Oct 2017 17:33:55 +0200 + +pandas (0.20.3-6) unstable; urgency=medium + + * Team upload. + * Ignore test errors on some architectures + (Concerns bug #877419) + * Remove __pycache__ remainings from testing + * Standards-Version: 4.1.1 + * DEP3 for Google Analytics patch + * Complete Google Analytics patch + + -- Andreas Tille Mon, 23 Oct 2017 09:05:27 +0200 + +pandas (0.20.3-5) unstable; urgency=medium + + * Make sure remainings of nose tests will not fail. That's a pretty stupid + patch since the tests are not using nose any more only some remaining + exceptions. Hope it will work anyway. + (Concerns bug #877419) + + -- Andreas Tille Mon, 16 Oct 2017 21:57:45 +0200 + +pandas (0.20.3-4) unstable; urgency=medium + + * Mark those tests @pytest.mark.intel that pass only on Intel architectures + * d/rules: try to exclude tests that were marked "intel" + (Concerns bug #877419) + + -- Andreas Tille Sat, 14 Oct 2017 19:49:01 +0200 + +pandas (0.20.3-3) unstable; urgency=medium + + * Team upload. + * Moved packaging from pkg-exppsy to Debian Science + * Exclude certain tests on certain architectures + (Concerns bug #877419) + + -- Andreas Tille Fri, 13 Oct 2017 20:52:53 +0200 + +pandas (0.20.3-2) unstable; urgency=medium + + * debian/control + - boosted policy to 4.0.0 (I think we should be ok) + - drop statsmodels from build-depends to altogether avoid the circular + build-depends (Closes: #875805) + * Diane Trout: + - Add dateutil-2.6.1-fixed-ambiguous-tz-dst-be.patch (Closes: #875807) + + -- Yaroslav Halchenko Thu, 21 Sep 2017 16:11:29 -0400 + +pandas (0.20.3-1) unstable; urgency=medium + + * Fresh upstream release + * debian/patches + - updated some, removed changeset*, and disabled possibly fixed upstream + ones + * debian/{control,rules} + - upstream switched to use pytest instead of nose + - enabled back all the tests for now + - added python-nbsphinx for b-depends, needed for docs + * debian/*.install + - no .so at the first level of subdirectories, now present on the third + + -- Yaroslav Halchenko Mon, 10 Jul 2017 20:00:59 -0400 + +pandas (0.19.2-5.1) unstable; urgency=medium + + * Non-maintainer upload. + * Apply patch by Rebecca N. Palmer + Closes: #858260 + + -- Andreas Tille Sun, 02 Apr 2017 07:06:36 +0200 + +pandas (0.19.2-5) unstable; urgency=medium + + * And one more test to skip on non-amd64 -- test_round_trip_valid_encodings + + -- Yaroslav Halchenko Thu, 12 Jan 2017 13:10:11 -0500 + +pandas (0.19.2-4) unstable; urgency=medium + + * Exclude few more "plotting" tests on non-amd64 which cause FTBFS + on s390 + + -- Yaroslav Halchenko Thu, 12 Jan 2017 11:43:13 -0500 + +pandas (0.19.2-3) unstable; urgency=medium + + * Brought back changeset_0699c89882133a41c250abdac02796fec84512e8.diff + which should resolve tests failures on BE platforms (wasn't yet + upstreamed within 0.19.x releases) + + -- Yaroslav Halchenko Thu, 12 Jan 2017 09:44:52 -0500 + +pandas (0.19.2-2) unstable; urgency=medium + + * Exclude a number of tests while running on non-amd64 platforms + due to bugs in numpy/pandas + + -- Yaroslav Halchenko Wed, 11 Jan 2017 12:13:05 -0500 + +pandas (0.19.2-1) unstable; urgency=medium + + * Fresh upstream minor release -- supposed to be bugfix but interacts + with current beta (1:1.12.0~b1-1) numpy leading to various failed tests + * debian/patches + - changeset_ae6a0a51cf41223394b7ef1038c210045d486cc8.diff + to guarantee the same Series dtype as of cut regardless of architecture + - up_buggy_overflows + workaround for inconsistent overflows while doing pow operation on big + ints + * debian/rules + - exclude more tests which are due to known issues in numpy beta and thus + not to be addressed directly in pandas + + -- Yaroslav Halchenko Wed, 04 Jan 2017 10:19:52 -0500 + +pandas (0.19.1+git174-g81a2f79-1) experimental; urgency=medium + + * New upstream snapshot from v0.19.0-174-g81a2f79 + - lots of bugfixes since 0.19.1, so decided to test snapshot + + -- Yaroslav Halchenko Sat, 10 Dec 2016 22:43:19 -0500 + +pandas (0.19.1-3) unstable; urgency=medium + + * Require cython >= 0.23 or otherwise use pre-cythoned sources + (should resolve https://github.com/pandas-dev/pandas/issues/14699 + on jessie) + * debian/control + - Build-Conflicts with python-tables 3.3.0-4 since that one leads to FTBFS + - boosted policy to 3.9.8 + * debian/rules + - Exclude few more tests which fail on big endian and other platforms + test_(msgpack|read_dta18) + * debian/patches + - changeset_0699c89882133a41c250abdac02796fec84512e8.diff + to compare in the tests against native endianness + + -- Yaroslav Halchenko Fri, 09 Dec 2016 15:49:50 -0500 + +pandas (0.19.1-2) unstable; urgency=medium + + * debian/control + - Moved statsmodels build-depend (optional) under build-depends-indep + to break circular dependency. Thanks Stuart Prescott for the analysis + * debian/patches/ + - changeset_1309346c08945cd4764a549ec63cf51089634a45.diff + to not mask problem reading json leading to use of undefined variable + + -- Yaroslav Halchenko Sun, 27 Nov 2016 21:49:40 -0500 + +pandas (0.19.1-1) unstable; urgency=medium + + * Fresh upstream release + + -- Yaroslav Halchenko Fri, 18 Nov 2016 12:19:54 -0500 + +pandas (0.19.0+git14-ga40e185-1) unstable; urgency=medium + + * New upstream post-release (includes some bugfixes) snapshot + * debian/patches + - dropped changeset_ and up_ patches adopted upstream, refreshed the rest + * debian/rules,patches + - save debian-based version into __version.py, so doesn't conflict with + upstream tests of public API + - exclude for now test_expressions on python3 + (see https://github.com/pydata/pandas/issues/14269) + + -- Yaroslav Halchenko Thu, 13 Oct 2016 10:26:18 -0400 + +pandas (0.18.1-1) unstable; urgency=medium + + * Fresh upstream release + * debian/patches/ + - changeset_46af7cf0f8e0477f6cc7454aa786a573228f0ac3.diff + to allow also AttributeError exception being thrown in the tests + (Closes: #827938) + - debian/patches/deb_skip_test_precision_i386 + removed (upstreamed) + + -- Yaroslav Halchenko Wed, 13 Jul 2016 10:42:00 -0400 + +pandas (0.18.0+git114-g6c692ae-1) unstable; urgency=medium + + * debian/control + - added python{,3}-pkg-resources to direct Depends for the packages + (Closes: #821076) + + -- Yaroslav Halchenko Sun, 17 Apr 2016 20:49:25 -0400 + +pandas (0.17.1-3) unstable; urgency=medium + + * debian/tests/unittest* + - set LC_ALL=C.UTF-8 for the tests run to prevent failure of test_set_locale + + -- Yaroslav Halchenko Tue, 08 Dec 2015 08:31:30 -0500 + +pandas (0.17.1-2) unstable; urgency=medium + + * debian/control + - make -statsmodels and -tables optional build-depends on those platforms + where they are N/A atm. Added bdepends on python3-tables since available + + -- Yaroslav Halchenko Sun, 06 Dec 2015 12:58:26 -0500 + +pandas (0.17.1-1) unstable; urgency=medium + + * Fresh upstream bugfix release + * debian/rules + - fixed deletion of moved away .so files + + -- Yaroslav Halchenko Fri, 27 Nov 2015 10:52:49 -0500 + +pandas (0.17.0+git8-gcac4ad2-2) unstable; urgency=medium + + * Bug fix: install also msgpack/*.so extensions to -lib packages + + -- Yaroslav Halchenko Sat, 10 Oct 2015 13:52:54 -0400 + +pandas (0.17.0+git8-gcac4ad2-1) unstable; urgency=medium + + * New upstream snapshot post release to pick up few bugfixes + - Started to trigger failures of test_constructor_compound_dtypes and + test_invalid_index_types -- disabled those for now, see + https://github.com/pydata/pandas/issues/11169 + * debian/rules + - Generate pandas/version.py if not present out of debian/changelog + upstream version information (versioneer wouldn't know since relies on + git) + + -- Yaroslav Halchenko Fri, 09 Oct 2015 21:35:23 -0400 + +pandas (0.16.2+git65-g054821d-1) unstable; urgency=medium + + * Fresh upstream post-release snapshot (to pick up recent fixes etc) + (Closes: #787432) + * debian/{control,rules} + - build -doc package (Closes: #660900) + - add ipython (or alternative new ones from neurodebian) into + Build-Depends-Indep to build docs + - add python{,3}-{lxml,html5lib} to Build-Depends and Recommends + - use LC_ALL=C.UTF-8 while running tests + - exclude also test_set_locale since it fails ATM + see https://github.com/pydata/pandas/issues/10471 + + -- Yaroslav Halchenko Tue, 30 Jun 2015 17:26:54 -0400 + +pandas (0.16.0~rc1-1) experimental; urgency=medium + + * New upstream release candidate + + -- Yaroslav Halchenko Fri, 13 Mar 2015 14:21:39 -0400 + +pandas (0.15.2-1) unstable; urgency=medium + + * Fresh upstream release + + -- Yaroslav Halchenko Thu, 11 Dec 2014 09:51:57 -0500 + +pandas (0.15.1+git125-ge463818-1) unstable; urgency=medium + + * New upstream snapshot from v0.15.1-125-ge463818. + * Upload to unstable during freeze since previous one in sid didn't make it + to jessie anyways + * debian/control + - remove versioning demand for cython (it would use pre-cythonized code on + older ones and there is no longer need in sid/jessie to enforce version). + As a consecuence -- removed all dsc patches pointing to + nocython3-dsc-patch, since no longer needed + + -- Yaroslav Halchenko Sun, 30 Nov 2014 21:09:36 -0500 + +pandas (0.15.0-2) unstable; urgency=medium + + * debian/control + - specify minimal numpy to be 1.7 + * debian/patches + - deb_skip_stata_on_bigendians skip test_stata again on BE platforms + - deb_skip_test_precision_i386 skip test_precision_conversion on 32bit + + -- Yaroslav Halchenko Thu, 30 Oct 2014 23:09:13 -0400 + +pandas (0.15.0-1) unstable; urgency=medium + + * New upstream release + * debian/control + - restrict statsmodels and matplotlib from being required on the ports + which do not have them + + -- Yaroslav Halchenko Sun, 26 Oct 2014 11:30:23 -0400 + +pandas (0.14.1-2) unstable; urgency=medium + + * debian/patches/changeset_314012d.diff + - Fix converter test for MPL1.4 (Closes: #763709) + + -- Yaroslav Halchenko Mon, 06 Oct 2014 11:53:42 -0400 + +pandas (0.14.1-1) unstable; urgency=medium + + * New upstream release + + -- Yaroslav Halchenko Thu, 10 Jul 2014 23:38:49 -0400 + +pandas (0.14.0+git393-g959e3e4-1) UNRELEASED; urgency=medium + + * New upstream snapshot from v0.14.0-345-g8cd3dd6 + * debian/rules + - disable running disabled tests to prevent clipboard tests failures + under kfreebsd kernels + + -- Yaroslav Halchenko Mon, 07 Jul 2014 12:29:50 -0400 + +pandas (0.14.0+git213-g741b2fa-1) experimental; urgency=medium + + * New upstream snapshot from v0.14.0-213-g741b2fa. + + -- Yaroslav Halchenko Thu, 19 Jun 2014 10:30:42 -0400 + +pandas (0.14.0+git17-g3849d5d-1) unstable; urgency=medium + + * New upstream snapshot from v0.14.0-17-g3849d5d -- has resolved a number + of bugs sneaked into 0.14.0 release, and caused FTBFS on some platforms + and backports + + -- Yaroslav Halchenko Sun, 01 Jun 2014 00:54:34 -0400 + +pandas (0.14.0-1) unstable; urgency=medium + + * New upstream release + + -- Yaroslav Halchenko Fri, 30 May 2014 08:45:35 -0400 + +pandas (0.14.0~rc1+git79-g1fa5dd4-1) experimental; urgency=medium + + * New upstream snapshot from v0.14.0rc1-73-g8793356 + * debian/patches: + - dropped CPed changeset_*s + - added deb_disable_googleanalytics + * debian/control: + - boosted policy compliance to 3.9.5 + + -- Yaroslav Halchenko Tue, 27 May 2014 16:00:00 -0400 + +pandas (0.13.1-2) unstable; urgency=low + + * debian/patches/changeset_6d56e7300d66d3ba76684334bbb44b6cd0ea9f61.diff + to fix FTBFS of statsmodels due to failing tests (Closes: #735804) + + -- Yaroslav Halchenko Sat, 08 Feb 2014 12:46:42 -0500 + +pandas (0.13.1-1) unstable; urgency=low + + * Fresh upstream release + * debian/patches + - deb_skip_test_pytables_failure to mitigate error while testing on + amd64 wheezy and ubuntu 12.04 + + -- Yaroslav Halchenko Tue, 04 Feb 2014 12:09:29 -0500 + +pandas (0.13.0+git464-g15a8ff7-1) experimental; urgency=low + + * Fresh pre-release snapshot + * debian/patches + - removed all cherry-picked patches (should have been upstreamed) + + -- Yaroslav Halchenko Wed, 29 Jan 2014 21:27:45 -0500 + +pandas (0.13.0-2) unstable; urgency=low + + * debian/patches + - 0001-BLD-fix-cythonized-msgpack-extension-in-setup.py-GH5.patch + to resolve issue with building C++ Cython extension using + pre-generated sources + - 0001-Add-division-future-import-everywhere.patch + 0002-remove-explicit-truediv-kwarg.patch + to resolve compatibility issues with elderly Numexpr + - 0001-BUG-Yahoo-finance-changed-ichart-url.-Fixed-here.patch + - deb_skip_sequencelike_on_armel to prevent FTBFS on armel due to failing + test: https://github.com/pydata/pandas/issues/4473 + + -- Yaroslav Halchenko Fri, 03 Jan 2014 23:13:48 -0500 + +pandas (0.13.0-1) unstable; urgency=low + + * Fresh upstream release + - resolved compatibility with matplotlib 1.3 (Closes: #733848) + * debian/{control,rules} + - use xvfb (added to build-depends together with xauth, and xclip) + for tests + - define http*_proxy to prevent downloads + - install .md files not .rst for docs -- were renamed upstream + - include .cpp Cython generated files into debian/cythonized-files* + + -- Yaroslav Halchenko Wed, 01 Jan 2014 18:08:22 -0500 + +pandas (0.12.0-2) unstable; urgency=low + + [ Dmitry Shachnev ] + * DEP-8 tests improvements: + - Use Xvfb for running tests. + - Increase verbosity using -v flag. + - Fix printing interpreter version in unittests3. + * Fix indentaion in debian/control. + + [ Yaroslav Halchenko ] + * debian/control + - place python3-matplotlib ahead of elderly python-matplotlib without + python3 support since now we have python3-matplotlib in sid + * debian/copyright + - go through reported missing copyright/license statements (Closes: + #700564) Thanks Luca Falavigna for the report + * debian/rules,patches + - exclude test test_bar_log due to incompatibility with matplotlib 1.3.0 (test + adjusted upstream and would be re-enabled for the new release). + - debian/patches/changeset_952c5f0bc433622d21df20ed761ee4cb728370eb.diff + adds matplotlib 1.3.0 compatibility + + -- Yaroslav Halchenko Sat, 14 Sep 2013 20:02:58 -0400 + +pandas (0.12.0-1) unstable; urgency=low + + * New upstream release: + - should address failed tests on 32bit platforms + * debian/patches + - neurodebian: allow to build for jessie with outdated cython + * debian/control + - build for Python2 >= 2.7 due to some (probably temporary) incompatibilities + in tests with 2.6 + + -- Yaroslav Halchenko Wed, 24 Jul 2013 23:29:03 -0400 + +pandas (0.12.0~rc1+git127-gec8920a-1) experimental; urgency=low + + * New upstream snapshot from origin/master at v0.12.0rc1-127-gec8920a + - should address FTBFS due to failing tests on big endians + + -- Yaroslav Halchenko Sat, 20 Jul 2013 09:23:04 -0400 + +pandas (0.12.0~rc1+git112-gb79996c-1) experimental; urgency=low + + * Fresh git snapshot of upstream candidate release. Experimental build + to verify functioning across the ports. + * debian/control + - dedented last "paragraph" to break it away from the 2nd one. + Thanks Beatrice Torracca for the detailed report (Closes: #712260) + - Depends on python-six now + * debian/{,tests/}control + - added python{,3}-bs4, python-html5lib to Build-Depends for more + thorough testing + + -- Yaroslav Halchenko Thu, 18 Jul 2013 13:15:19 -0400 + +pandas (0.11.0-2) unstable; urgency=low + + [ Yaroslav Halchenko ] + * Upload to unstable -- this upstream release addressed Cython 0.19 + compatibility issue (Closes: #710608) + * Recommends numexpr + * Re-cythonized using Cython 0.19 + + [ Dmitry Shachnev ] + * debian/tests/unittests3: use nosetests3 instead of nosetests-3.x. + + -- Yaroslav Halchenko Mon, 03 Jun 2013 11:57:43 -0400 + +pandas (0.11.0-1) experimental; urgency=low + + * New upstream release + + -- Yaroslav Halchenko Tue, 23 Apr 2013 22:40:15 -0400 + +pandas (0.10.1-1) experimental; urgency=low + + * New upstream release + + -- Yaroslav Halchenko Tue, 22 Jan 2013 13:07:31 -0500 + +pandas (0.10.0-1) experimental; urgency=low + + * New upstream release + - drops python 2.5 support (we are dropping pyversions in favor of + X-Python-Version) + * debian/patches: + - all previous are in upstream now, dropped locally + - added -dsc-patch'es for systems without cython3 + * debian/control: + - added python-statsmodels for the extended tests coverage + + -- Yaroslav Halchenko Mon, 17 Dec 2012 12:27:25 -0500 + +pandas (0.9.1-2) unstable; urgency=low + + [ Julian Taylor ] + * Provide python3 packages + * Add autopkgtests + * debian/patches: + - relax-float-tests.patch: + replace float equality tests with almost equal + - fix-endian-tests.patch: + patch from upstream to fix the test failure on big endian machines + + [ Yaroslav Halchenko ] + * Upload to unstable + * Dropping pysupport + * debian/rules: + - slight reduction of code duplication between python 2 and 3 + - cythonize for both python 2 and 3 into separate directories + + -- Yaroslav Halchenko Sat, 01 Dec 2012 22:57:47 -0500 + +pandas (0.9.1-1) experimental; urgency=low + + * New upstream release + * Boosted policy to 3.9.3 (no due changes) + * debian/rules + - Fixed up cleaning up of cythonized files + + -- Yaroslav Halchenko Wed, 14 Nov 2012 09:44:14 -0500 + +pandas (0.9.0-1) experimental; urgency=low + + * New upstream release + + -- Yaroslav Halchenko Sun, 07 Oct 2012 21:26:23 -0400 + +pandas (0.9.0~rc2-1) experimental; urgency=low + + * New upstream release candidate + + -- Yaroslav Halchenko Fri, 21 Sep 2012 10:27:52 -0400 + +pandas (0.8.1-1) unstable; urgency=low + + * Primarily a bugfix upstream release. + * up_tag_yahoo_test_requiring_network patch removed. + + -- Yaroslav Halchenko Sun, 22 Jul 2012 20:13:16 -0400 + +pandas (0.8.0-2) unstable; urgency=medium + + * up_tag_yahoo_test_requiring_network patch cherry-picked from upstream + GIT so that tests would not be excercised at package build time + (Closes: #681449) + + -- Yaroslav Halchenko Fri, 13 Jul 2012 08:54:41 -0400 + +pandas (0.8.0-1) unstable; urgency=low + + * Fresh upstream release + * debian/control + - drop python-statsmodels from Build-Depends since it might not be yet + available on some architectures and is not critical for the test + - recommend python-statsmodels instead of deprecated + python-scikits.statsmodels + + -- Yaroslav Halchenko Fri, 29 Jun 2012 13:02:28 -0400 + +pandas (0.8.0~rc2+git26-g76c6351-1) experimental; urgency=low + + * Fresh upstream release candidate + - all patches dropped (upstreamed) + - requires numpy >= 1.6 + + -- Yaroslav Halchenko Tue, 12 Jun 2012 13:23:27 -0400 + +pandas (0.7.3-1) unstable; urgency=low + + * Fresh upstream release + - few post-release patches (submitted upstream) to exclude unittests + requiring network access + * debian/control: + - python-openpyxl, python-xlwt, python-xlrd into Build-Depends + and Recommends + * debian/rules: + - exclude running tests marked with @network + + -- Yaroslav Halchenko Thu, 12 Apr 2012 11:27:31 -0400 + +pandas (0.7.1+git1-ga2e86c2-1) unstable; urgency=low + + * New upstream release with a bugfix which followed + + -- Yaroslav Halchenko Thu, 01 Mar 2012 22:28:10 -0500 + +pandas (0.7.0-1) unstable; urgency=low + + * New upstream release + * Updated pre-cythoned .c files for older Debian/Ubuntu releases. + Added a stamp file with upstream version to assure up-to-dateness + of the generated files + * Dropped all exclusions of unittests and patches -- shouldn't be necessary + any longer + * Build only for requested versions (not all supported) of Python + * Do nothing for build operation, rely on overloaded install + (to avoid undesired re-cythonization on elderly Ubuntus) + * Adjusted url in watch due to migration of repository under pydata + organization + + -- Yaroslav Halchenko Mon, 16 Jan 2012 19:31:50 -0500 + +pandas (0.6.1-1) UNRELEASED; urgency=low + + * New upstream release + * python-tk into Build-Depends + * Create matplotlibrc with backend: Agg to allow tests run without $DISPLAY + * Carry pre-cythonized .c files for systems with older Cython + * Skip few tests known to fail + + -- Yaroslav Halchenko Tue, 13 Dec 2011 18:36:11 -0500 + +pandas (0.5.0+git7-gcf32be2-1) unstable; urgency=low + + * New upstream release with post-release fixes + + -- Yaroslav Halchenko Tue, 01 Nov 2011 21:15:06 -0400 + +pandas (0.4.3-1) unstable; urgency=low + + * New upstream release(s): primarily bugfixes and optimizations but also + with some minor API changes and new functionality + * Adjusted debian/watch to match new layout on github + + -- Yaroslav Halchenko Tue, 18 Oct 2011 11:27:50 -0400 + +pandas (0.4.1-1) unstable; urgency=low + + * New upstream bugfix release + - incorporated all debian/patches + * debian/rules: 'clean' removes generated pandas/version.py + * debian/copyright: adjusted to become DEP-5 compliant + + -- Yaroslav Halchenko Sun, 25 Sep 2011 21:48:30 -0400 + +pandas (0.4.0-1) unstable; urgency=low + + * Initial Debian release (Closes: #641464) + + -- Yaroslav Halchenko Tue, 13 Sep 2011 12:24:05 -0400 diff --git a/contributors_list.txt b/contributors_list.txt new file mode 100644 index 00000000..9573faf7 --- /dev/null +++ b/contributors_list.txt @@ -0,0 +1,2989 @@ +Current to version 1.5.3 (generated by git shortlog -ns) +There may be multiple entries for the same person if they have used more than one (form of their) name +https://github.com/pandas-dev/pandas/graphs/contributors + + 4022 jbrockmendel + 3130 Wes McKinney + 3043 jreback + 1690 Jeff Reback + 1254 Joris Van den Bossche + 943 y-p + 758 Tom Augspurger + 714 Matthew Roeschke + 630 Chang She + 620 Simon Hawkins + 607 Phillip Cloud + 464 gfyoung + 344 sinhrks + 327 Adam Klein + 241 William Ayd + 240 Patrick Hoefler + 198 Richard Shadrach + 196 MomIsBestFriend + 194 Marc Garcia + 178 patrick + 168 Daniel Saxton + 162 Torsten Wörtwein + 160 Andy Hayden + 154 Terji Petersen + 148 topper-123 + 145 MeeseeksMachine + 134 Fangchen Li + 128 Jeff Tratner + 122 Jeffrey Tratner + 119 attack68 + 115 Marco Gorelli + 109 Vytautas Jancauskas + 102 Matthew Zeitlin + 95 Thomas Li + 93 Jeremy Schendel + 92 Pietro Battiston + 89 Kaiqi Dong + 89 Skipper Seabold + 86 alimcmaster1 + 85 h-vetinari + 84 Stephan Hoyer + 77 JHM Darbyshire + 76 Wouter Overmeire + 74 Andrew Wieteska + 71 Kevin Sheppard + 70 jschendel + 66 Maxim Ivanov + 65 Sinhrks + 62 Martin Winkel + 61 TomAugspurger + 60 Mortada Mehyar + 57 Christopher Whelan + 55 Chris + 55 Thomas Kluyver + 54 behzad nouri + 51 Marco Edward Gorelli + 50 Irv Lustig + 49 Ka Wo Chen + 43 Kieran O'Mahony + 42 Dieter Vandenbussche + 38 Paul Reidy + 34 chris-b1 + 33 Evan Wright + 32 bwignall + 31 Jan Schulz + 31 Mak Sze Chun + 29 Yaroslav Halchenko + 29 immerrr + 28 David Stephens + 27 Avinash Pancham + 27 Luke Manley + 27 Thierry Moisan + 26 Gábor Lipták + 26 Justin Zheng + 26 Shoham Debnath + 26 realead + 25 Stephen Lin + 25 Thein Oo + 25 rockg + 24 Erfan Nariman + 24 Khor Chean Wei + 24 partev + 23 Fabian Haase + 23 Yuanhao Geng + 22 Jonas Haag + 22 Licht Takeuchi + 22 Ming Li + 22 ganevgv + 22 github-actions[bot] + 21 Ryan Nazareth + 21 moink + 20 DSM + 20 Dan Birken + 20 lexual + 19 Abraham Flaxman + 19 Alex Kirko + 19 Artemy Kolchinsky + 18 Ali McMaster + 18 Farhan Reynaldo + 18 Kerby Shedden + 18 Robert de Vries + 18 pilkibun + 18 unutbu + 17 Aidan Feldman + 17 Anthonios Partheniou + 17 Nicolas Bonnotte + 17 Uwe L. Korn + 16 Jiaxiang + 16 Matt Roeschke + 16 Saurav Chakravorty + 16 Tim Swast + 16 danielballan + 16 mzeitlin11 + 16 onesandzeroes + 15 Abdullah İhsan Seçer + 15 Tobias Brandt + 15 seth-p + 14 Christopher C. Aycock + 14 Dr. Irv + 14 Gregory Rome + 14 Maximilian Roos + 14 Roy Hyunjin Han + 14 Spencer Lyon + 14 locojaydev + 14 rhshadrach + 13 Alex Rothberg + 13 John W. O'Brien + 13 Jonathan Chambers + 13 Todd Jennings + 13 Vaibhav Vishal + 13 dataxerik + 13 willpeppo + 12 Albert Villanova del Moral + 12 Alex Rychyk + 12 Bharat Raghunathan + 12 Luca Beltrame + 12 PKEuS + 12 Richard T. Guy + 12 Thomas Smith + 12 Tommy + 12 Wenhuan + 11 Andrew Rosenfeld + 11 Daniel Himmelstein + 11 Joe Jevnik + 11 John Zangwill + 11 Keith Hughitt + 11 Pandas Development Team + 11 Parfait Gasana + 11 anmyachev + 11 proost + 11 terrytangyuan + 10 Aaron Critchley + 10 Alexander Ponomaroff + 10 Andrew Hawyrluk + 10 Anjali2019 + 10 Dale Jung + 10 DriesS + 10 Eric Leung + 10 Felix Dulys + 10 Garrett Drapala + 10 John McNamara + 10 K.-Michael Aye + 10 Kendall Masse + 10 Martin Blais + 10 Nick Eubank + 10 Sam Foo + 10 Shahar Naveh + 10 cbertinato + 9 3vts + 9 Damien Garaud + 9 Guillaume Gay + 9 Jack Goldsmith + 9 Jacob Schaer + 9 Michael Marino + 9 Shao Yang Hong + 9 Tobias Pitters + 9 Tong SHEN + 9 Vasily Litvinov + 9 Viktor Kerkez + 9 cleconte987 + 9 poloso + 8 Adam J. Stewart + 8 Aly Sivji + 8 Brandon Bradley + 8 Dr-Irv + 8 Hugh Kelley + 8 Joel Nothman + 8 Kalyan Gokhale + 8 Mike Kelly + 8 Oleh Kozynets + 8 OlivierLuG + 8 RaisaDZ + 8 Shawn Heide + 8 Varun + 8 Vyom Pathak + 8 himanshu awasthi + 8 iasoon + 8 jnmclarty + 7 Benedikt Sauer + 7 Chuanzhu Xu + 7 Dan Allan + 7 Daniel Schmidt + 7 Derek McCammond + 7 Francis T. O'Donovan + 7 Honfung Wong + 7 Jason Sexauer + 7 Johannes Mueller + 7 Kernc + 7 Michael Mueller + 7 Quang Nguyễn + 7 Robin to Roxel + 7 Rushabh Vasani + 7 Samesh Lakhotia + 7 Takafumi Arakaki + 7 Thomas Grainger + 7 Winterflower + 7 Younggun Kim + 7 Yury Mikhaylov + 7 dsm054 + 7 ftrihardjo + 7 nipunreddevil + 7 nrebena + 7 scls19fr + 7 themien + 6 ArtinSarraf + 6 Benjamin Rowell + 6 Brad Buran + 6 Bran Yang + 6 Brian Wignall + 6 Chris Whelan + 6 David Bew + 6 Deepyaman Datta + 6 FactorizeD + 6 Garrett-R + 6 Graham Inggs + 6 HH-MWB + 6 Jeff Carey + 6 Kashif Khan + 6 Kelsey Jordahl + 6 Mateusz Woś + 6 Matt Kirk + 6 Matti Picus + 6 Micael Jarniac + 6 Neil Parley + 6 Nicholaus E. Halecky + 6 Piotr Jucha + 6 Roman Yurchak + 6 Rouz Azari + 6 Stephen Hoover + 6 Steve + 6 Thomas A Caswell + 6 Thomas Dickson + 6 Tola A + 6 Uddeshya Singh + 6 Vincent Arel-Bundock + 6 WANG Aiyong + 6 Wes Turner + 6 ZhuBaohe + 6 agijsberts + 6 agraboso + 6 ajcr + 6 clham + 6 hasan-yaman + 6 ischwabacher + 6 kernc + 6 krajatcl + 6 mproszewska + 6 rbenes + 6 rebecca-palmer + 6 saehuihwang + 6 smartvinnetou + 6 timmie + 6 tmnhat2001 + 5 Adam Obeng + 5 Addison Lynch + 5 Ajay Saxena + 5 Alan Velasco + 5 Alexandre Prince-Levasseur + 5 Andrew + 5 Asish Mahapatra + 5 Ben Kandel + 5 Chapman Siu + 5 Clark Fitzgerald + 5 Clemens Brunner + 5 DataOmbudsman + 5 David Cottrell + 5 Douglas McNeil + 5 Galuh Sahid + 5 Gjelt + 5 Janelle Zoutkamp + 5 Joeperdefloep + 5 Jon Mease + 5 Joris Vankerschaver + 5 Josh + 5 Josh Dimarsky + 5 Ksenia + 5 Lars Buitinck + 5 LeakedMemory + 5 Loic Diridollou + 5 Loïc Estève + 5 Luis Pinto + 5 Marc Abramowitz + 5 Mark Wiebe + 5 Matthias Bussonnier + 5 Max Chen + 5 Michael Hsieh + 5 Nicholas Musolino + 5 Nick Crews + 5 Oğuzhan Öğreden + 5 Pauli Virtanen + 5 Peter + 5 Prabakaran Kumaresshan + 5 Prakhar Pandey + 5 Sangwoong Yoon + 5 Scott E Lasley + 5 Stijn Van Hoey + 5 Sumanau Sareen + 5 Sylvain Marié + 5 Tao He + 5 Tarbo Fukazawa + 5 Ted Petrou + 5 Tomaz Berisa + 5 TrigonaMinima + 5 Troels Nielsen + 5 William Blan + 5 Xingrong Chen + 5 Yuichiro Kaneko + 5 avinashpancham + 5 benjamin + 5 dieterv77 + 5 dilex42 + 5 donK23 + 5 fathomer + 5 kylekeppler + 5 pv8493013j + 5 tshauck + 5 yui-knk + 4 Adam Greenhall + 4 Alex Lim + 4 Alvaro Tejero-Cantero + 4 Andreas Würl + 4 Anna Daglis + 4 Anthony Milbourne + 4 Armin Varshokar + 4 Avi Sen + 4 Ben Beasley + 4 Benjamin Thyreau + 4 Blake Hawkins + 4 Bob Haffner + 4 Brenda Moon + 4 Brett Naul + 4 Brian Hulette + 4 Caleb Epstein + 4 Calvin Ho + 4 Chalmer Lowe + 4 Cheuk Ting Ho + 4 Chris Billington + 4 Chris Warth + 4 Chris Zimmerman + 4 Christian Hudon + 4 DaanVanHauwermeiren + 4 Dan Miller + 4 Daniel Waeber + 4 Danil Iashchenko + 4 Dave Hughes + 4 David Adrián Cañones Castellano + 4 Dražen Lučanin + 4 Ekaterina + 4 Erik + 4 Fred Reiss + 4 Gianluca Rossi + 4 Giftlin Rajaiah + 4 Goyo + 4 Gregg Lind + 4 Guilherme Beltramini + 4 Henning Sperr + 4 Isaac Virshup + 4 Jacques Kvam + 4 James Myatt + 4 Janosh Riebesell + 4 JennaVergeynst + 4 Jev Kuznetsov + 4 Jiang Yue + 4 Jim Crist + 4 John Karasinski + 4 John Zwinck + 4 Jonathan Shreckengost + 4 Junya Hayashi + 4 Kevin Stone + 4 Krishna + 4 Kyle Meyer + 4 Laura Collard, PhD + 4 Lorenzo Maffioli + 4 Lucas Rodés-Guirao + 4 Mabel Villalba + 4 Marian Denes + 4 Mark Graham + 4 Matias Heikkilä + 4 Matt Wittmann + 4 Matthew Gilbert + 4 Max van Deursen + 4 Nathan Abel + 4 Nicholas Ver Halen + 4 Nick Anderson + 4 OXPHOS + 4 Olivier Grisel + 4 Oluokun Adedayo + 4 Parthi + 4 Paul Ivanov + 4 Qbiwan + 4 Ram Rachum + 4 Robert Gieseke + 4 Roger Thomas + 4 Samuel Sinayoko + 4 Shane Conway + 4 Shivam Rana + 4 Sofiane Mahiou + 4 Srinivas Reddy Thatiparthy (శ్రీనివాస్ రెడ్డి తాటిపర్తి) + 4 Stephen Rauch + 4 Stéphan Taljaard + 4 Sven + 4 Trent Hauck + 4 Tyler Reddy + 4 Varun Shrivastava + 4 Vincent La + 4 Vladimir Filimonov + 4 Vyomkesh Tripathi + 4 Wenjun Si + 4 Will Holmgren + 4 Yoshiki Vázquez Baeza + 4 Zero + 4 akosel + 4 aneesh98 + 4 cel4 + 4 cgohlke + 4 chapman siu + 4 gliptak + 4 hugo + 4 junk + 4 kota matsuoka + 4 luzpaz + 4 robbuckley + 4 rosagold + 4 srotondo + 4 taytzehao + 4 vangorade + 4 waitingkuo + 4 wcwagner + 3 Aaditya Panikath + 3 Abhijeet Krishnan + 3 Adam Hooper + 3 Ahmed Ibrahim + 3 Aleksey Bilogur + 3 Alex Alekseyev + 3 Alexander Buchkovsky + 3 Alfonso MHC + 3 Alp Arıbal + 3 Andreas Winkler + 3 Andrew Wood + 3 Angelos Evripiotis + 3 Aniruddha Bhattacharjee + 3 Anjana S + 3 Anthony Givans + 3 Anton I. Sipos + 3 Baurzhan Muftakhidinov + 3 BeanNan + 3 Ben Welsh + 3 Benjamin Beier Liu + 3 Benoît Vinot + 3 Bhavani Ravi + 3 Big Head + 3 Boris Rumyantsev + 3 Brandon M. Burroughs + 3 Brian Sun + 3 Brock Mendel + 3 Carlos Souza + 3 Chris Bertinato + 3 Chris Mazzullo + 3 Christoph Gohlke + 3 Christos Petropoulos + 3 DaPy15 + 3 DanielFEvans + 3 Dave Hirschfeld + 3 Dave Willmer + 3 David Krych + 3 Devin Petersohn + 3 Dillon Niederhut + 3 Doug Latornell + 3 EdAbati + 3 Elle + 3 Elliot Rampono + 3 Eric Chea + 3 Felix Divo + 3 Francesc Via + 3 Gabriel Monteiro + 3 Gesa Stupperich + 3 Giacomo Ferroni + 3 Giftlin + 3 Grant Smith + 3 Guillaume Lemaitre + 3 Guillaume Poulin + 3 Hammad Mashkoor + 3 Haochen Wu + 3 Harshavardhan Bachina + 3 Hielke Walinga + 3 Horace Lai + 3 Hubert + 3 Hugues Valois + 3 Hyukjin Kwon + 3 Iain Barr + 3 Ingolf Becker + 3 Iqrar Agalosi Nureyza + 3 Israel Saeta Pérez + 3 Ivan Nazarov + 3 JMBurley + 3 Jack Bicknell + 3 Jack Liu + 3 Jake VanderPlas + 3 James Cobon-Kerr + 3 Jan Rudolph + 3 Jan-Philip Gehrcke + 3 Jared Groves + 3 Jean Helie + 3 Jean-Mathieu Deschenes + 3 Jeroen Kant + 3 Jesper Dramsch + 3 Jesse Farnham + 3 Joel Ostblom + 3 John Freeman + 3 John Mantios + 3 John McGuigan + 3 Joon Ro + 3 Jordan Hicks + 3 Josh Friedlander + 3 Josh Klein + 3 Josiah Baker + 3 José Duarte + 3 Julia Signell + 3 Justin Essert + 3 Kamil Trocewicz + 3 Kapil E. Iyer + 3 Karmel Allison + 3 Kate Surta + 3 Keshav Ramaswamy + 3 Kim, KwonHyun + 3 Krishna Chivukula + 3 Kyle Barron + 3 Leonardus Chen + 3 Liam3851 + 3 Louis Huynh + 3 MBrouns + 3 Markus Meier + 3 Martin Durant + 3 Martina Oefelein + 3 Mateusz + 3 Mathis Felardos + 3 Matt Braymer-Hayes + 3 Matteo Santamaria + 3 Matthew Brett + 3 Max Bolingbroke + 3 Maximiliano Greco + 3 Mike Kutzma + 3 Miroslav Å edivý + 3 Mitar + 3 Mohammad Jafar Mashhadi + 3 Myles Braithwaite + 3 Naomi Bonnin + 3 Nate Yoder + 3 Nick Pentreath + 3 Noa Tamir + 3 Noah + 3 Noam Hershtig + 3 Nofar Mishraki + 3 Pamela Wu + 3 Patrick O'Brien + 3 Paul + 3 Paul Ganssle + 3 Philipp A + 3 Piotr Niełacny + 3 Pradyumna Rahul + 3 Prasanjit Prakash + 3 Prithvijit + 3 Pulkit Maloo + 3 Rahul Sathanapalli + 3 Randy Carnevale + 3 Ray Bell + 3 Riccardo Magliocchetti + 3 Richard Höchenberger + 3 Rik-de-Kort + 3 Robin + 3 Robin Wilson + 3 Rohith295 + 3 Ryan + 3 Safia Abdalla + 3 Sahil Dua + 3 Sarthak Vineet Kumar + 3 SatheeshKumar Mohan + 3 Sebastian Bank + 3 Shorokhov Sergey + 3 Simon Gibbons + 3 Souvik Mandal + 3 Sparkle Russell-Puleri + 3 Stefania Delprete + 3 Stefanie Molin + 3 Stefano Cianciulli + 3 Suvayu Ali + 3 TLouf + 3 Tania Allard + 3 Thijs Damsma + 3 Thomas Yu + 3 Tim Hoffmann + 3 Tjerk Santegoeds + 3 Toby Dylan Hocking + 3 Tom Ajamian + 3 Tom Bird + 3 UrielMaD + 3 Vaibhav K + 3 Victoria Zdanovskaya + 3 Yago González + 3 Yanxian Lin + 3 Yian + 3 Zac Hatfield-Dodds + 3 Zheyuan + 3 Zito Relova + 3 abmyii + 3 adneu + 3 aflah02 + 3 alm + 3 alphaCTzo7G + 3 anomrake + 3 arredond + 3 auderson + 3 beanan + 3 davidshinn + 3 dengemann + 3 deponovo + 3 duozhang + 3 ehsan shirvanian + 3 fjetter + 3 guru kiran + 3 jdeschenes + 3 jen w + 3 jnecus + 3 joshuaar + 3 linebp + 3 lukasbk + 3 mcjcode + 3 miker985 + 3 nathalier + 3 neelmraman + 3 ogiaquino + 3 prossahl + 3 rekcahpassyla + 3 ri938 + 3 shawnbrown + 3 shubham11941140 + 3 stonebig + 3 tehunter + 3 thatneat + 3 tushushu + 3 tv3141 + 3 unknown + 3 usersblock + 3 za + 3 zach powers + 2 Aaron Staple + 2 Abhishek Mangla + 2 Achmad Syarif Hidayatullah + 2 Adam Bull + 2 Adam Marcus + 2 Adam Turner + 2 Adrian Mastronardi + 2 Aidan Montare + 2 Alex Chase + 2 Alex Gaudio + 2 Alex Hall + 2 Alex Volkov + 2 Alex Watt + 2 Alex-Gregory-1 + 2 Alexander Michael Schade + 2 Alexis Mignon + 2 AleÅ¡ Erjavec + 2 Allen Downey + 2 Andrew Burrows + 2 Andy + 2 Andy R. Terrel + 2 Angela Ambroz + 2 Antoine Mazières + 2 Artem Bogachev + 2 Atsushi Nukariya + 2 Ayla Khan + 2 Batalex + 2 Ben Alex + 2 Ben Schiller + 2 Ben Thayer + 2 Benjamin Adams + 2 Bernard Willers + 2 Bhuvana KA + 2 Bill Letson + 2 Bobae Kim + 2 Bryan Cutler + 2 Camilo Cota + 2 Carol Willing + 2 Chamoun Saoma + 2 Chandrasekaran Anirudh Bhardwaj + 2 Chankey Pathak + 2 Charalampos Papaloizou + 2 Charles David + 2 Chris Grinolds + 2 Chris Lynch + 2 Chris Reynolds + 2 Chris Stadler + 2 Chris Stoafer + 2 Chris Withers + 2 ChrisAlbertsen + 2 Christer van der Meeren + 2 Christian Chwala + 2 CloseChoice + 2 Cody + 2 Compro Prasad + 2 Dan Ringwalt + 2 Daniel Grady + 2 Daniel Hrisca + 2 Daniel I + 2 Daniel Isaac + 2 Dare Adewumi + 2 Data & Code Expert Experimenting with Code on Data + 2 DavaIlhamHaeruzaman + 2 David Arcos + 2 David Cook + 2 David Gwynne + 2 David Li + 2 David Stansby + 2 Deepang Raval + 2 Dennis Chukwunta + 2 Dennis J. Gray + 2 DeviousLab + 2 Devjeet Roy + 2 Diane Trout + 2 Diego Argueta + 2 Digres45 + 2 Dom + 2 Doran Deluz + 2 Douglas Hanley + 2 Douglas Rudd + 2 Dražen Lučanin + 2 Drew Seibert + 2 Dror Atariah + 2 Eduardo Schettino + 2 Egor + 2 Egor Panfilov + 2 Eirik + 2 Elliott Sales de Andrade + 2 Emiliano Jordan + 2 Endre Mark Borza + 2 Eric Chlebek + 2 Eric Wieser + 2 EricLeer + 2 Eve + 2 Fabian Gabel + 2 Fabian Gebhart + 2 Fabian Retkowski + 2 Fabian Rost + 2 Fabio Zanini + 2 Florian Jetter + 2 Fábio Rosado + 2 Gabriel Corona + 2 Gabriel Di Pardi Arruda + 2 Gabriel Tutui + 2 Gautham + 2 George Hartzell + 2 Geraint Duck + 2 Giacomo Caria + 2 Gina + 2 Gioia Ballin + 2 Giovanni Lanzani + 2 Graham Jeffries + 2 Grant Roch + 2 Guillaume Horel + 2 Gustavo C. Maciel + 2 Hamed Saljooghinejad + 2 Hannah Ferchland + 2 Hans + 2 Hassan Kibirige + 2 Henry Kleynhans + 2 How Si Wei + 2 HubertKl + 2 HyunTruth + 2 Hyungtae Kim + 2 Ian Eaves + 2 Ian Henriksen + 2 Iblis Lin + 2 Ignacio Santolin + 2 Ilya V. 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Haaland + 1 颜发才(Yan Facai) + +Debian packaging + 400 Rebecca N. Palmer + 323 Yaroslav Halchenko + 49 Mo Zhou + 38 Andreas Tille + 26 Graham Inggs + 7 Jochen Sprickerhof + 4 Dmitry Shachnev + 2 Julian Taylor + 2 Yaroslav O Halchenko + 1 Diane Trout + 1 Ole Streicher diff --git a/control b/control new file mode 100644 index 00000000..20581ff5 --- /dev/null +++ b/control @@ -0,0 +1,197 @@ +Source: pandas +Maintainer: Debian Science Team +Uploaders: Yaroslav Halchenko , + Michael Hanke , + Rebecca N. Palmer +Section: python +Priority: optional +Build-Depends: debhelper-compat (= 13), + dh-python, + locales-all, + python3-all-dev, + cython3 (>= 0.29.32~), +# we don't have this version python3-blosc (>= 1.21.0~) , + python3-bottleneck (>= 1.3.2~) , + python3-bs4 (>= 4.9.3~) , + python3-dask (>= 2.10.1~) , + python3-dateutil, + python3-fsspec (>= 2021.07.0~) , + python3-html5lib (>= 1.1~) , + python3-hypothesis (>= 6.13.0~) , + python3-jinja2 (>= 3.0~) , + python3-lxml (>= 4.6.3~) , + python3-matplotlib (>= 3.3.2~) [!ia64 !sh4 !x32] , +# armel, s390x numba crash, mipsel gives wrong answer, most ports don't have numba +# uninstallable due to #1024795 python3-numba (>= 0.53.1~) [amd64 arm64 armhf i386 mips64el mipsel ppc64el s390x] , + python3-numexpr (>= 2.8.0~) , + python3-numpy (>= 1:1.18.5~), + python3-odf (>= 1.4.1~) , + python3-openpyxl (>= 3.0.7~) , +# doesn't seem to work in this test environment python3-psycopg2 (>= 2.8.6~) , +# doesn't seem to work in this test environment python3-pymysql (>= 1.0.2~) , + python3-pytest (>= 6.0~) , + python3-pytest-asyncio (>= 0.17~) , + python3-pytest-forked , + python3-pytest-xdist (>= 1.31~) , + python3-scipy, + python3-setuptools (>= 51~), + python3-six, +# we don't have this version python3-snappy (>= 0.6.0~) , + python3-sqlalchemy (>= 1.4.16~) , + python3-tables (>= 3.6.1~) , + python3-tabulate (>= 0.8.9~) , + python3-tk , + python3-tz (>= 2022.1~) , +# we don't have this version python3-xlrd (>= 2.0.1~) , + python3-xlsxwriter (>= 1.4.3~) , +# having xlwt and not xlrd breaks tests/io/test_fsspec.py python3-xlwt (>= 1.3.0~) , + python3-zstandard , + sphinx-common, + xvfb , + xauth , + xclip +Build-Depends-Indep: python3-sphinx , + python3-sphinx-copybutton , + python3-sphinx-panels , + python3-pydata-sphinx-theme , + python3-ipykernel , + python3-notebook (>= 6.0.3~) , + python3-nbconvert (>= 6.4.5~) , + python3-nbsphinx , + python3-numpydoc , + ipython3 (>= 7.11.1~) , + jdupes , +# for style.ipynb + pandoc , +# for intersphinx inventories + python3-doc , +# no longer exists python-numpy-doc , + python-scipy-doc , +# no longer exists python-matplotlib-doc , + python-statsmodels-doc , +# these are for not having (as many) exception messages in documentation examples +# so may be temporarily removed if they are broken or to break bootstrap cycles +# not in Debian (not to be confused with python3-arrow) python3-pyarrow , +#fails with KeyError 'state', possibly nbconvert bug 1731 python3-ipywidgets , + python3-rpy2 , + python3-seaborn , + python3-sqlalchemy , + python3-statsmodels , + python3-xarray (>= 0.19.0~) , +Standards-Version: 4.6.2 +Vcs-Browser: https://salsa.debian.org/science-team/pandas +Vcs-Git: https://salsa.debian.org/science-team/pandas.git +Homepage: https://pandas.pydata.org/ +Rules-Requires-Root: no + +Package: python3-pandas +Architecture: all +Depends: ${misc:Depends}, + ${python3:Depends}, + python3-numpy, + python3-dateutil, + python3-pandas-lib (>= ${source:Upstream-Version}), +# should maybe have a python3-pandas-lib (<< ${source:Upstream-Version}.0), as well, but that leaves arch:all BD-Uninstallable if arch:amd64 builds first + python3-pkg-resources, + python3-six +Recommends: python3-scipy, + python3-matplotlib, + python3-tz, +# for faster processing +# see -lib for python3-numba + python3-bottleneck, + python3-numexpr, +# for spreadsheet I/O + python3-odf, + python3-openpyxl, +# for HTML table I/O + python3-bs4, + python3-html5lib, + python3-lxml, +# for HDF5 I/O + python3-tables, +# for styled output + python3-jinja2 +Suggests: python-pandas-doc, + python3-statsmodels +Breaks: +# 0.23 -> 0.25 API breaks, #931557 + cnvkit (<< 0.9.6-2~), +# 0.25 -> 1.0 API breaks, #950430 + python3-biom-format (<< 2.1.8+dfsg-3.1~), + python3-seaborn (<< 0.9.1~), +# 1.0 -> 1.1 API breaks, #969650 +# 1.1 -> 1.3 API breaks, see #999415 + python3-cfgrib (<= 0.9.9-1), + python3-joypy (<= 0.2.2-2), + python3-cooler (<= 0.8.8-1), +# 1.3 -> 1.4 API breaks, see #1017809 + python3-skbio (<= 0.5.6-6), + python3-ulmo (<= 0.8.8+dfsg1-1), +# 1.4 -> 1.5 API breaks, see #1022571 + python3-emperor (<= 1.0.3+ds-4), + python3-statsmodels (<< 0.13.5~), + q2templates (<= 2022.8.0+ds-1), + python3-dask (<= 2022.02.0+dfsg-2) +Description: data structures for "relational" or "labeled" data + pandas is a Python package providing fast, flexible, and expressive + data structures designed to make working with "relational" or + "labeled" data both easy and intuitive. It aims to be the fundamental + high-level building block for doing practical, real world data + analysis in Python. pandas is well suited for many different kinds of + data: + . + - Tabular data with heterogeneously-typed columns, as in an SQL + table or Excel spreadsheet + - Ordered and unordered (not necessarily fixed-frequency) time + series data. + - Arbitrary matrix data (homogeneously typed or heterogeneous) with + row and column labels + - Any other form of observational / statistical data sets. The data + actually need not be labeled at all to be placed into a pandas + data structure + . + This package contains the Python 3 version. + +Package: python-pandas-doc +Architecture: all +Section: doc +Depends: ${misc:Depends}, + ${sphinxdoc:Depends}, + libjs-mathjax +Suggests: python3-pandas +Multi-Arch: foreign +Description: data structures for "relational" or "labeled" data - documentation + pandas is a Python package providing fast, flexible, and expressive + data structures designed to make working with "relational" or + "labeled" data both easy and intuitive. It aims to be the fundamental + high-level building block for doing practical, real world data + analysis in Python. pandas is well suited for many different kinds of + data: + . + - Tabular data with heterogeneously-typed columns, as in an SQL + table or Excel spreadsheet + - Ordered and unordered (not necessarily fixed-frequency) time + series data. + - Arbitrary matrix data (homogeneously typed or heterogeneous) with + row and column labels + - Any other form of observational / statistical data sets. The data + actually need not be labeled at all to be placed into a pandas + data structure + . + This package contains the documentation. + +Package: python3-pandas-lib +Architecture: any +Multi-Arch: same +Depends: ${misc:Depends}, + ${shlibs:Depends}, + ${python3:Depends}, + python3-numpy +# this is here to allow it to be arch-specific, to avoid numba bugs on other architectures +Recommends: python3-numba [amd64] +Description: low-level implementations and bindings for pandas + This is a low-level package for python3-pandas providing + architecture-dependent extensions. + . + Users should not need to install it directly. diff --git a/copyright b/copyright new file mode 100644 index 00000000..aeacbde4 --- /dev/null +++ b/copyright @@ -0,0 +1,742 @@ +Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ +Upstream-Name: pandas +Upstream-Contact: pandas-dev@python.org +Source: https://github.com/pandas-dev/pandas +Files-Excluded: doc/source/user_guide/cookbook.rst + .circleci + .github + .gitignore + .gitattributes +Comment: cookbook has around 100 Stack Overflow snippets (CC-BY-SA with possibly inadequate attribution), the Google pandas/io/auth.py referred to in LICENSES/OTHER was removed in upstream commit 1bad601 + +Files: * +Copyright: 2008-2023 AQR Capital Management, LLC, Lambda Foundry, Inc., PyData Development Team, Open source contributors +License: BSD-3 +Comment: Lumped together as notices disagree on which ones are which years. See contributors_list.txt for a full list of commit authors. 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Notwithstanding the foregoing two (2) sentences, if Creative + Commons has expressly identified itself as the Licensor hereunder, it shall have all rights and + obligations of Licensor. + . + Except for the limited purpose of indicating to the public that the Work is licensed under the CCPL, + Creative Commons does not authorize the use by either party of the trademark "Creative + Commons" or any related trademark or logo of Creative Commons without the prior written consent + of Creative Commons. Any permitted use will be in compliance with Creative Commons' then-current + trademark usage guidelines, as may be published on its website or otherwise made available upon + request from time to time. For the avoidance of doubt, this trademark restriction does not form part + of the License. + . + Creative Commons may be contacted at http://creativecommons.org/. diff --git a/gbp.conf b/gbp.conf new file mode 100644 index 00000000..8b88dba4 --- /dev/null +++ b/gbp.conf @@ -0,0 +1,7 @@ +[DEFAULT] +# the default branch for upstream sources: +upstream-branch = upstream +# the default branch for the debian patch: +debian-branch = main + + diff --git a/patches/1029251_ignore_rounding_error.patch b/patches/1029251_ignore_rounding_error.patch new file mode 100644 index 00000000..75dbd5a0 --- /dev/null +++ b/patches/1029251_ignore_rounding_error.patch @@ -0,0 +1,79 @@ +Description: Don't fail plot tests on rounding error + +Author: Rebecca N. Palmer +Bug-Debian: https://bugs.debian.org/1029251 +Forwarded: no + +--- pandas-1.5.3+dfsg.orig/pandas/tests/plotting/frame/test_frame_subplots.py ++++ pandas-1.5.3+dfsg/pandas/tests/plotting/frame/test_frame_subplots.py +@@ -4,6 +4,7 @@ import string + import warnings + + import numpy as np ++from numpy.testing import assert_array_almost_equal_nulp + import pytest + + import pandas.util._test_decorators as td +@@ -378,7 +379,7 @@ class TestDataFramePlotsSubplots(TestPlo + # no subplots + df = DataFrame({"A": [3] * 5, "B": list(range(1, 6))}, index=range(5)) + ax = df.plot.bar(grid=True, log=True) +- tm.assert_numpy_array_equal(ax.yaxis.get_ticklocs(), expected) ++ assert_array_almost_equal_nulp(ax.yaxis.get_ticklocs(), expected, 4) + + def test_bar_log_subplots(self): + expected = np.array([0.1, 1.0, 10.0, 100.0, 1000.0, 1e4]) +@@ -387,8 +388,8 @@ class TestDataFramePlotsSubplots(TestPlo + log=True, subplots=True + ) + +- tm.assert_numpy_array_equal(ax[0].yaxis.get_ticklocs(), expected) +- tm.assert_numpy_array_equal(ax[1].yaxis.get_ticklocs(), expected) ++ assert_array_almost_equal_nulp(ax[0].yaxis.get_ticklocs(), expected, 4) ++ assert_array_almost_equal_nulp(ax[1].yaxis.get_ticklocs(), expected, 4) + + def test_boxplot_subplots_return_type(self, hist_df): + df = hist_df +--- pandas-1.5.3+dfsg.orig/pandas/tests/plotting/test_series.py ++++ pandas-1.5.3+dfsg/pandas/tests/plotting/test_series.py +@@ -3,6 +3,7 @@ from datetime import datetime + from itertools import chain + + import numpy as np ++from numpy.testing import assert_array_almost_equal_nulp + import pytest + + import pandas.util._test_decorators as td +@@ -249,12 +250,12 @@ class TestSeriesPlots(TestPlotBase): + + _, ax = self.plt.subplots() + ax = Series([200, 500]).plot.bar(log=True, ax=ax) +- tm.assert_numpy_array_equal(ax.yaxis.get_ticklocs(), expected) ++ assert_array_almost_equal_nulp(ax.yaxis.get_ticklocs(), expected, 4) + tm.close() + + _, ax = self.plt.subplots() + ax = Series([200, 500]).plot.barh(log=True, ax=ax) +- tm.assert_numpy_array_equal(ax.xaxis.get_ticklocs(), expected) ++ assert_array_almost_equal_nulp(ax.xaxis.get_ticklocs(), expected, 4) + tm.close() + + # GH 9905 +@@ -267,7 +268,7 @@ class TestSeriesPlots(TestPlotBase): + res = ax.get_ylim() + tm.assert_almost_equal(res[0], ymin) + tm.assert_almost_equal(res[1], ymax) +- tm.assert_numpy_array_equal(ax.yaxis.get_ticklocs(), expected) ++ assert_array_almost_equal_nulp(ax.yaxis.get_ticklocs(), expected, 4) + tm.close() + + _, ax = self.plt.subplots() +@@ -275,7 +276,7 @@ class TestSeriesPlots(TestPlotBase): + res = ax.get_xlim() + tm.assert_almost_equal(res[0], ymin) + tm.assert_almost_equal(res[1], ymax) +- tm.assert_numpy_array_equal(ax.xaxis.get_ticklocs(), expected) ++ assert_array_almost_equal_nulp(ax.xaxis.get_ticklocs(), expected, 4) + + def test_bar_ignore_index(self): + df = Series([1, 2, 3, 4], index=["a", "b", "c", "d"]) diff --git a/patches/968208_rounding.patch b/patches/968208_rounding.patch new file mode 100644 index 00000000..046a4223 --- /dev/null +++ b/patches/968208_rounding.patch @@ -0,0 +1,27 @@ +Description: Don't fail test for rounding difference on i386 + +Author: Rebecca N. Palmer +Bug-Debian: https://bugs.debian.org/968208 +Forwarded: no + +--- a/pandas/tests/window/test_rolling.py ++++ b/pandas/tests/window/test_rolling.py +@@ -1,3 +1,7 @@ ++import sys ++import platform ++import re ++ + from datetime import ( + datetime, + timedelta, +@@ -1708,7 +1712,9 @@ def test_rolling_quantile_interpolation_ + if np.isnan(q1): + assert np.isnan(q2) + else: +- assert q1 == q2 ++ assert np.abs(q1-q2)<1e-15 ++ if not (re.match('i.?86|x86',platform.uname()[4]) and sys.maxsize<2**33): ++ assert q1 == q2 + + + def test_invalid_quantile_value(): diff --git a/patches/armel_ignore_nonwarning.patch b/patches/armel_ignore_nonwarning.patch new file mode 100644 index 00000000..b0b33c72 --- /dev/null +++ b/patches/armel_ignore_nonwarning.patch @@ -0,0 +1,29 @@ +Description: Don't require a warning armel numpy doesn't have + +Author: Rebecca N. Palmer +Forwarded: no (this version requires dpkg) + +--- a/pandas/tests/apply/test_str.py ++++ b/pandas/tests/apply/test_str.py +@@ -72,6 +72,12 @@ def test_apply_np_reducer(op, how): + @pytest.mark.parametrize("how", ["transform", "apply"]) + def test_apply_np_transformer(float_frame, op, how): + # GH 39116 ++ # armel numpy currently doesn't have the invalid log/sqrt warning (see 1.4.3-1 build log, ++ # possibly the same underlying issue as statsmodels https://bugs.debian.org/956882) ++ # using nullcontext() instead of warn=None to not start failing if this ever gets fixed ++ import subprocess ++ import contextlib ++ debian_arch = subprocess.run(["dpkg","--print-architecture"],capture_output=True).stdout + + # float_frame will _usually_ have negative values, which will + # trigger the warning here, but let's put one in just to be sure +@@ -80,7 +86,7 @@ def test_apply_np_transformer(float_fram + if op in ["log", "sqrt"]: + warn = RuntimeWarning + +- with tm.assert_produces_warning(warn, check_stacklevel=False): ++ with (contextlib.nullcontext() if (debian_arch==b'armel\n') else tm.assert_produces_warning(warn, check_stacklevel=False)): + # float_frame fixture is defined in conftest.py, so we don't check the + # stacklevel as otherwise the test would fail. + result = getattr(float_frame, how)(op) diff --git a/patches/contributor_list_not_in_tarball.patch b/patches/contributor_list_not_in_tarball.patch new file mode 100644 index 00000000..460313b8 --- /dev/null +++ b/patches/contributor_list_not_in_tarball.patch @@ -0,0 +1,28 @@ +Description: Don't try to read a contributor list from the git log + +Debian packages are built from tarballs, so there isn't a git log. + +Author: Rebecca N. Palmer +Forwarded: not-needed + +--- a/doc/sphinxext/contributors.py ++++ b/doc/sphinxext/contributors.py +@@ -14,10 +14,8 @@ use:: + While the v0.23.1 tag does not exist, that will use the HEAD of the + branch as the end of the revision range. + """ +-from announce import build_components + from docutils import nodes + from docutils.parsers.rst import Directive +-import git + + + class ContributorsDirective(Directive): +@@ -25,6 +23,7 @@ class ContributorsDirective(Directive): + name = "contributors" + + def run(self): ++ return [nodes.paragraph(), nodes.Text("For contributors, please see /usr/share/doc/contributors_list.txt or https://github.com/pandas-dev/pandas/graphs/contributors")] + range_ = self.arguments[0] + if range_.endswith("x..HEAD"): + return [nodes.paragraph(), nodes.bullet_list()] diff --git a/patches/deb_disable_googleanalytics.patch b/patches/deb_disable_googleanalytics.patch new file mode 100644 index 00000000..7198d365 --- /dev/null +++ b/patches/deb_disable_googleanalytics.patch @@ -0,0 +1,92 @@ +Description: Avoid privacy breach by Google Analytics + +Author: Yaroslav Halchenko , + Andreas Tille , + Rebecca N. Palmer +Forwarded: not-needed + +--- a/pandas/tests/io/data/html/spam.html ++++ b/pandas/tests/io/data/html/spam.html +@@ -27,45 +27,9 @@ + + + +- +- ++ + + + +@@ -794,4 +758,4 @@ handler: function() {this.cancel();}, +   Software v.1.2.2 + + +- +\ No newline at end of file ++ +--- a/web/pandas/_templates/layout.html ++++ b/web/pandas/_templates/layout.html +@@ -1,14 +1,6 @@ + + + +- + pandas - Python Data Analysis Library + + +--- a/doc/source/conf.py ++++ b/doc/source/conf.py +@@ -243,7 +243,6 @@ html_theme_options = { + "footer_items": ["pandas_footer", "sphinx-version"], + "github_url": "https://github.com/pandas-dev/pandas", + "twitter_url": "https://twitter.com/pandas_dev", +- "google_analytics_id": "UA-27880019-2", + "logo": {"image_dark": "https://pandas.pydata.org/static/img/pandas_white.svg"}, + "navbar_end": ["version-switcher", "theme-switcher", "navbar-icon-links"], + "switcher": { diff --git a/patches/deb_doc_donotoverride_PYTHONPATH.patch b/patches/deb_doc_donotoverride_PYTHONPATH.patch new file mode 100644 index 00000000..50db7b19 --- /dev/null +++ b/patches/deb_doc_donotoverride_PYTHONPATH.patch @@ -0,0 +1,21 @@ +Description: Don't try to import from the source directory + +Needed as we build the extension modules elsewhere + +Author: Yaroslav Halchenko +Forwarded: not-needed + +--- a/doc/make.py ++++ b/doc/make.py +@@ -354,8 +354,9 @@ def main(): + # external libraries (namely Sphinx) to compile this module and resolve + # the import of `python_path` correctly. The latter is used to resolve + # the import within the module, injecting it into the global namespace +- os.environ["PYTHONPATH"] = args.python_path +- sys.path.insert(0, args.python_path) ++ # Debian: we set it outside ++ #os.environ["PYTHONPATH"] = args.python_path ++ #sys.path.insert(0, args.python_path) + globals()["pandas"] = importlib.import_module("pandas") + + # Set the matplotlib backend to the non-interactive Agg backend for all diff --git a/patches/deb_nonversioneer_version.patch b/patches/deb_nonversioneer_version.patch new file mode 100644 index 00000000..5dc2fc24 --- /dev/null +++ b/patches/deb_nonversioneer_version.patch @@ -0,0 +1,46 @@ +Description: Don't try to use git to find the version number + +Needed as Debian buildds use tarballs + +Author: Yaroslav Halchenko +Forwarded: not-needed + +--- a/pandas/__init__.py ++++ b/pandas/__init__.py +@@ -175,13 +175,7 @@ from pandas.io.json import _json_normali + + from pandas.util._tester import test + +-# use the closest tagged version if possible +-from pandas._version import get_versions +- +-v = get_versions() +-__version__ = v.get("closest-tag", v["version"]) +-__git_version__ = v.get("full-revisionid") +-del get_versions, v ++from .__version import version as __version__ + + # GH 27101 + __deprecated_num_index_names = ["Float64Index", "Int64Index", "UInt64Index"] +--- a/pandas/tests/api/test_api.py ++++ b/pandas/tests/api/test_api.py +@@ -195,7 +195,7 @@ class TestPDApi(Base): + "_is_numpy_dev", + "_testing", + "_typing", +- "_version", ++# not in Debian "_version", + ] + + def test_api(self): +--- a/pandas/tests/test_common.py ++++ b/pandas/tests/test_common.py +@@ -156,7 +156,7 @@ def test_standardize_mapping(): + dd = collections.defaultdict(list) + assert isinstance(com.standardize_mapping(dd), partial) + +- ++@pytest.mark.xfail(reason="deb_nonversioneer_version patch") + def test_git_version(): + # GH 21295 + git_version = pd.__git_version__ diff --git a/patches/find_test_data.patch b/patches/find_test_data.patch new file mode 100644 index 00000000..5f3eb3fe --- /dev/null +++ b/patches/find_test_data.patch @@ -0,0 +1,66 @@ +Description: Allow tests to use the data files in the source tree + +We don't ship these in the package, +but do want to run the tests that use them + +Author: Rebecca N. Palmer +Forwarded: not-needed + +--- a/pandas/conftest.py ++++ b/pandas/conftest.py +@@ -30,6 +30,7 @@ from decimal import Decimal + import operator + import os + from typing import Callable ++import argparse + + from dateutil.tz import ( + tzlocal, +@@ -112,6 +113,7 @@ def pytest_addoption(parser) -> None: + action="store_true", + help="Fail if a test is skipped for missing data file.", + ) ++ parser.addoption("--deb-data-root-dir",action="store",help=argparse.SUPPRESS)#for internal use of the Debian CI infrastructure, may change without warning. Security note: test_pickle can run arbitrary code from this directory + + + def ignore_doctest_warning(item: pytest.Item, path: str, message: str) -> None: +@@ -1141,7 +1143,7 @@ def strict_data_files(pytestconfig): + + + @pytest.fixture +-def datapath(strict_data_files: str) -> Callable[..., str]: ++def datapath(strict_data_files: str,pytestconfig) -> Callable[..., str]: + """ + Get the path to a data file. + +@@ -1159,7 +1161,9 @@ def datapath(strict_data_files: str) -> + ValueError + If the path doesn't exist and the --strict-data-files option is set. + """ +- BASE_PATH = os.path.join(os.path.dirname(__file__), "tests") ++ BASE_PATH = pytestconfig.getoption("--deb-data-root-dir",default=None) ++ if BASE_PATH is None: ++ BASE_PATH = os.path.join(os.path.dirname(__file__), "tests") + + def deco(*args): + path = os.path.join(BASE_PATH, *args) +--- a/pandas/tests/util/test_util.py ++++ b/pandas/tests/util/test_util.py +@@ -57,6 +57,7 @@ def test_datapath_missing(datapath): + datapath("not_a_file") + + ++@pytest.mark.xfail(reason="--deb-data-root-dir intentionally breaks this",strict=False) + def test_datapath(datapath): + args = ("io", "data", "csv", "iris.csv") + +--- a/pandas/tests/io/formats/style/test_html.py ++++ b/pandas/tests/io/formats/style/test_html.py +@@ -40,6 +40,7 @@ def tpl_table(): + return env.get_template("html_table.tpl") + + ++@pytest.mark.xfail(reason="--deb-data-root-dir is expected to break this",strict=False) + def test_html_template_extends_options(): + # make sure if templates are edited tests are updated as are setup fixtures + # to understand the dependency diff --git a/patches/fix_overly_arch_specific_xfails.patch b/patches/fix_overly_arch_specific_xfails.patch new file mode 100644 index 00000000..63f5fff5 --- /dev/null +++ b/patches/fix_overly_arch_specific_xfails.patch @@ -0,0 +1,93 @@ +Description: Fix arch-specific upstream xfails + +We test on more architectures, so upstream's xfails are not always +correct everywhere. On those known to fail: +arm64 xfail -> all non-x86 xfail +x86 or unconditional strict xfail -> unconditional nonstrict xfail + +pandas/tests/window/test_rolling.py also gets an i386 xfail for +rounding error that may be x87 excess precision + +Author: Rebecca N. Palmer +Bug: https://github.com/pandas-dev/pandas/issues/38921, https://github.com/pandas-dev/pandas/issues/38798, https://github.com/pandas-dev/pandas/issues/41740, https://github.com/numpy/numpy/issues/19146 +Forwarded: no + +--- a/pandas/tests/window/test_rolling.py ++++ b/pandas/tests/window/test_rolling.py +@@ -13,7 +13,12 @@ import pytest + from pandas.compat import ( + is_platform_arm, + is_platform_mac, ++ IS64, + ) ++import platform ++import re ++is_platform_x86_64 = bool(re.match('i.?86|x86',platform.uname()[4])) and IS64 ++ + from pandas.errors import UnsupportedFunctionCall + + from pandas import ( +@@ -1195,7 +1200,7 @@ def test_rolling_sem(frame_or_series): + tm.assert_series_equal(result, expected) + + +-@pytest.mark.xfail(is_platform_arm() and not is_platform_mac(), reason="GH 38921") ++@pytest.mark.xfail(not is_platform_x86_64, strict=False, reason="GH 38921") + @pytest.mark.parametrize( + ("func", "third_value", "values"), + [ +--- a/pandas/tests/groupby/test_groupby.py ++++ b/pandas/tests/groupby/test_groupby.py +@@ -2587,7 +2587,7 @@ def test_groupby_series_with_tuple_name( + tm.assert_series_equal(result, expected) + + +-@pytest.mark.xfail(not IS64, reason="GH#38778: fail on 32-bit system") ++@pytest.mark.xfail(not IS64, reason="GH#38778: fail on 32-bit system", strict=False) + @pytest.mark.parametrize( + "func, values", [("sum", [97.0, 98.0]), ("mean", [24.25, 24.5])] + ) +@@ -2600,7 +2600,7 @@ def test_groupby_numerical_stability_sum + tm.assert_frame_equal(result, expected) + + +-@pytest.mark.xfail(not IS64, reason="GH#38778: fail on 32-bit system") ++@pytest.mark.xfail(not IS64, reason="GH#38778: fail on 32-bit system", strict=False) + def test_groupby_numerical_stability_cumsum(): + # GH#38934 + data = [1e16, 1e16, 97, 98, -5e15, -5e15, -5e15, -5e15] +--- a/pandas/tests/tools/test_to_numeric.py ++++ b/pandas/tests/tools/test_to_numeric.py +@@ -760,7 +760,7 @@ def test_to_numeric_from_nullable_string + "UInt64", + "signed", + "UInt64", +- marks=pytest.mark.xfail(not is_platform_arm(), reason="GH38798"), ++ marks=pytest.mark.xfail(strict=False, reason="GH38798"), + ), + ([1, 1], "Int64", "unsigned", "UInt8"), + ([1.0, 1.0], "Float32", "unsigned", "UInt8"), +--- a/pandas/tests/io/parser/test_c_parser_only.py ++++ b/pandas/tests/io/parser/test_c_parser_only.py +@@ -29,6 +29,9 @@ from pandas import ( + concat, + ) + import pandas._testing as tm ++import platform ++import re ++is_platform_x86 = bool(re.match('i.?86|x86',platform.uname()[4])) + + + @pytest.mark.parametrize( +@@ -680,9 +683,9 @@ def test_float_precision_options(c_parse + + df3 = parser.read_csv(StringIO(s), float_precision="legacy") + +- if IS64: ++ if is_platform_x86 and IS64: + assert not df.iloc[0, 0] == df3.iloc[0, 0] +- else: ++ elif is_platform_x86: + assert df.iloc[0, 0] == df3.iloc[0, 0] + + msg = "Unrecognized float_precision option: junk" diff --git a/patches/fix_random_seeds.patch b/patches/fix_random_seeds.patch new file mode 100644 index 00000000..49165a1c --- /dev/null +++ b/patches/fix_random_seeds.patch @@ -0,0 +1,35 @@ +Description: Use fixed seeds for reproducible pseudorandomness + +Author: Rebecca N. Palmer +Forwarded: no + +--- a/doc/source/getting_started/comparison/comparison_with_r.rst ++++ b/doc/source/getting_started/comparison/comparison_with_r.rst +@@ -241,6 +241,7 @@ In pandas we may use :meth:`~pandas.pivo + + import random + import string ++ random.seed(123456) # for reproducibility + + baseball = pd.DataFrame( + { +--- a/doc/source/user_guide/advanced.rst ++++ b/doc/source/user_guide/advanced.rst +@@ -595,6 +595,7 @@ they need to be sorted. As with any inde + + import random + ++ random.seed(123456) # for reproducibility + random.shuffle(tuples) + s = pd.Series(np.random.randn(8), index=pd.MultiIndex.from_tuples(tuples)) + s +--- a/doc/source/user_guide/visualization.rst ++++ b/doc/source/user_guide/visualization.rst +@@ -1019,6 +1019,7 @@ be passed, and when ``lag=1`` the plot i + :suppress: + + np.random.seed(123456) ++ random.seed(123456) # for reproducibility - bootstrap_plot uses random.sample + + .. ipython:: python + diff --git a/patches/float_to_datetime.patch b/patches/float_to_datetime.patch new file mode 100644 index 00000000..dfe07c96 --- /dev/null +++ b/patches/float_to_datetime.patch @@ -0,0 +1,46 @@ +Description: float-to-datetime conversion fixes + +Avoid assuming that NaN casts to NaT (= fails on riscv64/hppa ?) +Don't round to int for the bounds check when we don't for the real +conversion (wrong near the bounds, and maybe also a waste of time) + +Author: Rebecca N. Palmer +Forwarded: https://github.com/pandas-dev/pandas/pull/50183 + +--- a/pandas/_libs/tslib.pyx ++++ b/pandas/_libs/tslib.pyx +@@ -296,12 +296,18 @@ def array_with_unit_to_datetime( + # if we have nulls that are not type-compat + # then need to iterate + +- if values.dtype.kind in ["i", "f", "u"]: ++ if values.dtype.kind in ["i", "u"]: + iresult = values.astype("i8", copy=False) + # fill missing values by comparing to NPY_NAT + mask = iresult == NPY_NAT + iresult[mask] = 0 +- fvalues = iresult.astype("f8") * mult ++ fvalues = iresult.astype("f8") * mult # TODO as this is only used for bounds checking, would it be more efficient to divide the bounds by mult? (don't just use integer iresult * mult, we need arithmetic overflow to be an error not a wraparound) ++ need_to_iterate = False ++ ++ if values.dtype.kind in ["f",]: ++ mask = (values != values) | (values == NPY_NAT) # first is NaNs ++ fvalues = (values * mult).astype("f8") # TODO would values.astype('f8')*mult have less rounding error? (or does this need to support longer-than-double floats where it's worse?) would copy=False be faster? ++ fvalues[mask] = 0 + need_to_iterate = False + + if not need_to_iterate: +@@ -315,11 +321,9 @@ def array_with_unit_to_datetime( + result = (iresult * mult).astype("M8[ns]") + + elif values.dtype.kind == "f": +- fresult = (values * mult).astype("f8") +- fresult[mask] = 0 + if prec: +- fresult = round(fresult, prec) +- result = fresult.astype("M8[ns]", copy=False) ++ fvalues = round(fvalues, prec) # TODO why does this exist, it looks like prec's always 0 (was p from precision_to_unit meant to be prec?) ++ result = fvalues.astype("M8[ns]", copy=False) + + iresult = result.view("i8") + iresult[mask] = NPY_NAT diff --git a/patches/hurd_compat.patch b/patches/hurd_compat.patch new file mode 100644 index 00000000..351e21ba --- /dev/null +++ b/patches/hurd_compat.patch @@ -0,0 +1,123 @@ +Description: Avoid test failures on Hurd + +Allow multiprocessing to be unavailable +Accept any errno not just 2 for (intentionally) nonexistent files +(Hurd appears to use 2**30+2) + +Author: Rebecca N. Palmer +Forwarded: no + +--- a/pandas/tests/io/parser/common/test_file_buffer_url.py ++++ b/pandas/tests/io/parser/common/test_file_buffer_url.py +@@ -90,7 +90,7 @@ def test_nonexistent_path(all_parsers): + parser = all_parsers + path = f"{uuid.uuid4()}.csv" + +- msg = r"\[Errno 2\]" ++ msg = r"\[Errno 2\]|\[Errno [0-9]+\] No such file or directory" + with pytest.raises(FileNotFoundError, match=msg) as e: + parser.read_csv(path) + assert path == e.value.filename +@@ -101,7 +101,7 @@ def test_no_permission(all_parsers): + # GH 23784 + parser = all_parsers + +- msg = r"\[Errno 13\]" ++ msg = r"\[Errno 13\]|\[Errno [0-9]+\] Permission denied" + with tm.ensure_clean() as path: + os.chmod(path, 0) # make file unreadable + +--- a/pandas/tests/io/parser/common/test_float.py ++++ b/pandas/tests/io/parser/common/test_float.py +@@ -53,7 +53,7 @@ def test_too_many_exponent_digits(all_pa + data = f"data\n10E{exp}" + result = parser.read_csv(StringIO(data), float_precision=precision) + if precision == "round_trip": +- if exp == 999999999999999999 and is_platform_linux(): ++ if exp == 999999999999999999: + mark = pytest.mark.xfail(reason="GH38794, on Linux gives object result") + request.node.add_marker(mark) + +--- a/pandas/tests/io/parser/test_multi_thread.py ++++ b/pandas/tests/io/parser/test_multi_thread.py +@@ -4,7 +4,12 @@ parsing files for each parser defined in + """ + from contextlib import ExitStack + from io import BytesIO +-from multiprocessing.pool import ThreadPool ++import pytest ++try: ++ from multiprocessing.pool import ThreadPool ++ ThreadPool() ++except ImportError: ++ pytest.skip("multiprocessing not available",allow_module_level=True) + + import numpy as np + import pytest +--- a/pandas/tests/test_downstream.py ++++ b/pandas/tests/test_downstream.py +@@ -40,6 +40,11 @@ def df(): + + @pytest.mark.filterwarnings("ignore:.*64Index is deprecated:FutureWarning") + def test_dask(df): ++ try: ++ from multiprocessing.pool import ThreadPool ++ ThreadPool() ++ except ImportError: ++ pytest.skip("multiprocessing not available") + + # dask sets "compute.use_numexpr" to False, so catch the current value + # and ensure to reset it afterwards to avoid impacting other tests +--- a/pandas/tests/io/test_common.py ++++ b/pandas/tests/io/test_common.py +@@ -196,16 +196,16 @@ Look,a snake,🐍""" + + path = os.path.join(HERE, "data", "does_not_exist." + fn_ext) + msg1 = rf"File (b')?.+does_not_exist\.{fn_ext}'? does not exist" +- msg2 = rf"\[Errno 2\] No such file or directory: '.+does_not_exist\.{fn_ext}'" ++ msg2 = rf"\[Errno [0-9]+\] No such file or directory: '.+does_not_exist\.{fn_ext}'" + msg3 = "Expected object or value" + msg4 = "path_or_buf needs to be a string file path or file-like" + msg5 = ( +- rf"\[Errno 2\] File .+does_not_exist\.{fn_ext} does not exist: " ++ rf"\[Errno [0-9]+\] File .+does_not_exist\.{fn_ext} does not exist: " + rf"'.+does_not_exist\.{fn_ext}'" + ) +- msg6 = rf"\[Errno 2\] 没有那个文件或目录: '.+does_not_exist\.{fn_ext}'" ++ msg6 = rf"\[Errno [0-9]+\] 没有那个文件或目录: '.+does_not_exist\.{fn_ext}'" + msg7 = ( +- rf"\[Errno 2\] File o directory non esistente: '.+does_not_exist\.{fn_ext}'" ++ rf"\[Errno [0-9]+\] File o directory non esistente: '.+does_not_exist\.{fn_ext}'" + ) + msg8 = rf"Failed to open local file.+does_not_exist\.{fn_ext}" + +@@ -266,16 +266,16 @@ Look,a snake,🐍""" + monkeypatch.setattr(icom, "_expand_user", lambda x: os.path.join("foo", x)) + + msg1 = rf"File (b')?.+does_not_exist\.{fn_ext}'? does not exist" +- msg2 = rf"\[Errno 2\] No such file or directory: '.+does_not_exist\.{fn_ext}'" ++ msg2 = rf"\[Errno [0-9]+\] No such file or directory: '.+does_not_exist\.{fn_ext}'" + msg3 = "Unexpected character found when decoding 'false'" + msg4 = "path_or_buf needs to be a string file path or file-like" + msg5 = ( +- rf"\[Errno 2\] File .+does_not_exist\.{fn_ext} does not exist: " ++ rf"\[Errno [0-9]+\] File .+does_not_exist\.{fn_ext} does not exist: " + rf"'.+does_not_exist\.{fn_ext}'" + ) +- msg6 = rf"\[Errno 2\] 没有那个文件或目录: '.+does_not_exist\.{fn_ext}'" ++ msg6 = rf"\[Errno [0-9]+\] 没有那个文件或目录: '.+does_not_exist\.{fn_ext}'" + msg7 = ( +- rf"\[Errno 2\] File o directory non esistente: '.+does_not_exist\.{fn_ext}'" ++ rf"\[Errno [0-9]+\] File o directory non esistente: '.+does_not_exist\.{fn_ext}'" + ) + msg8 = rf"Failed to open local file.+does_not_exist\.{fn_ext}" + +@@ -583,7 +583,7 @@ def test_bad_encdoing_errors(): + + def test_errno_attribute(): + # GH 13872 +- with pytest.raises(FileNotFoundError, match="\\[Errno 2\\]") as err: ++ with pytest.raises(FileNotFoundError, match="\\[Errno [0-9]+\\]") as err: + pd.read_csv("doesnt_exist") + assert err.errno == errno.ENOENT + diff --git a/patches/mathjax-path.patch b/patches/mathjax-path.patch new file mode 100644 index 00000000..f8a596cf --- /dev/null +++ b/patches/mathjax-path.patch @@ -0,0 +1,16 @@ +Description: Use Debian packaged mathjax + +Author: Andreas Tille +Forwarded: not-needed + +--- a/doc/source/conf.py ++++ b/doc/source/conf.py +@@ -71,6 +71,8 @@ extensions = [ + "nbsphinx", + ] + ++mathjax_path="MathJax.js" ++ + exclude_patterns = [ + "**.ipynb_checkpoints", + # to ensure that include files (partial pages) aren't built, exclude them diff --git a/patches/mips_warning.patch b/patches/mips_warning.patch new file mode 100644 index 00000000..193a0fbd --- /dev/null +++ b/patches/mips_warning.patch @@ -0,0 +1,22 @@ +Description: Warn that pandas is possibly broken on mips(64)(el) + +Tests disabled in d/rules + +Author: Rebecca N. Palmer +Forwarded: not-needed + +--- a/pandas/__init__.py ++++ b/pandas/__init__.py +@@ -2,6 +2,12 @@ from __future__ import annotations + + __docformat__ = "restructuredtext" + ++import platform ++import warnings ++if 'mips' in platform.uname()[4]: ++ warnings.warn("This appears to be a mips system, on which pandas is buggy (may give wrong answers or crash)") ++del platform, warnings ++ + # Let users know if they're missing any of our hard dependencies + _hard_dependencies = ("numpy", "pytz", "dateutil") + _missing_dependencies = [] diff --git a/patches/no_sphinx_toggleprompt.patch b/patches/no_sphinx_toggleprompt.patch new file mode 100644 index 00000000..e92cc47d --- /dev/null +++ b/patches/no_sphinx_toggleprompt.patch @@ -0,0 +1,15 @@ +Description: Don't try to use a Sphinx extension we don't have + +Author: Rebecca N. Palmer +Forwarded: not-needed + +--- a/doc/source/conf.py ++++ b/doc/source/conf.py +@@ -57,7 +57,6 @@ extensions = [ + "numpydoc", + "sphinx_copybutton", + "sphinx_panels", +- "sphinx_toggleprompt", + "sphinx.ext.autodoc", + "sphinx.ext.autosummary", + "sphinx.ext.coverage", diff --git a/patches/numba_fail_32bit.patch b/patches/numba_fail_32bit.patch new file mode 100644 index 00000000..514401df --- /dev/null +++ b/patches/numba_fail_32bit.patch @@ -0,0 +1,278 @@ +Description: Allow some numba errors on non-amd64, warn on non-x86 + +Specifying the exception type allows only explicit errors, +not silently wrong answers + +Numba has been observed to give wrong answers on mipsel, +and crash on armel (LLVM ERROR) and s390x (segfault). + +Author: Rebecca N. Palmer +Forwarded: no + +--- a/pandas/tests/window/test_numba.py ++++ b/pandas/tests/window/test_numba.py +@@ -24,6 +24,14 @@ pytestmark = pytest.mark.skipif( + "'Windows fatal exception: stack overflow' " + "and MacOS can timeout", + ) ++from pandas.compat import is_platform_little_endian ++import platform ++import sys ++try: ++ from numba.core.errors import UnsupportedParforsError,TypingError ++except ImportError: ++ UnsupportedParforsError = ImportError ++ TypingError = ImportError + + + @pytest.fixture(params=["single", "table"]) +@@ -50,6 +58,8 @@ def arithmetic_numba_supported_operators + + + @td.skip_if_no("numba") ++@pytest.mark.xfail(condition=sys.maxsize<2**33, raises=UnsupportedParforsError, reason="some Numba functionality is not available on 32 bit systems", strict=False) ++@pytest.mark.xfail(condition=not is_platform_little_endian(), reason="Numba may crash on s390x", run=False, strict=False) + @pytest.mark.filterwarnings("ignore") + # Filter warnings when parallel=True and the function can't be parallelized by Numba + class TestEngine: +@@ -134,6 +144,7 @@ class TestEngine: + expected = getattr(expand, method)(engine="cython", **kwargs) + tm.assert_equal(result, expected) + ++ @pytest.mark.xfail(condition='mips' in platform.uname()[4].lower() and sys.maxsize<2**33, reason="Numba may give wrong answers on mipsel", strict=False) + @pytest.mark.parametrize("jit", [True, False]) + def test_cache_apply(self, jit, nogil, parallel, nopython, step): + # Test that the functions are cached correctly if we switch functions +@@ -227,6 +238,8 @@ class TestEngine: + + + @td.skip_if_no("numba") ++@pytest.mark.xfail(condition=sys.maxsize<2**33, raises=UnsupportedParforsError, reason="some Numba functionality is not available on 32 bit systems", strict=False) ++@pytest.mark.xfail(condition=not is_platform_little_endian(), reason="Numba may crash on s390x", run=False, strict=False) + class TestEWM: + @pytest.mark.parametrize( + "grouper", [lambda x: x, lambda x: x.groupby("A")], ids=["None", "groupby"] +@@ -310,6 +323,7 @@ class TestEWM: + + + @td.skip_if_no("numba") ++@pytest.mark.xfail(condition=not is_platform_little_endian(), reason="Numba may crash on s390x", run=False, strict=False) + def test_use_global_config(): + def f(x): + return np.mean(x) + 2 +@@ -331,6 +345,7 @@ def test_invalid_kwargs_nopython(): + + @td.skip_if_no("numba") + @pytest.mark.slow ++@pytest.mark.xfail(condition=sys.maxsize<2**33, raises=(UnsupportedParforsError,TypingError), reason="some Numba functionality is not available on 32 bit systems", strict=False) + @pytest.mark.filterwarnings("ignore") + # Filter warnings when parallel=True and the function can't be parallelized by Numba + class TestTableMethod: +--- a/pandas/tests/window/test_online.py ++++ b/pandas/tests/window/test_online.py +@@ -22,6 +22,11 @@ pytestmark = pytest.mark.skipif( + "and MacOS can timeout", + ) + ++import sys ++try: ++ from numba.core.errors import UnsupportedParforsError ++except ImportError: ++ UnsupportedParforsError = ImportError + + @td.skip_if_no("numba") + @pytest.mark.filterwarnings("ignore") +@@ -37,6 +42,7 @@ class TestEWM: + online_ewm.mean(update=df.head(1)) + + @pytest.mark.slow ++ @pytest.mark.xfail(condition=sys.maxsize<2**33, raises=UnsupportedParforsError, reason="some Numba functionality is not available on 32 bit systems", strict=False) + @pytest.mark.parametrize( + "obj", [DataFrame({"a": range(5), "b": range(5)}), Series(range(5), name="foo")] + ) +--- a/pandas/tests/window/conftest.py ++++ b/pandas/tests/window/conftest.py +@@ -7,6 +7,7 @@ import numpy as np + import pytest + + import pandas.util._test_decorators as td ++from pandas.compat import is_platform_little_endian + + from pandas import ( + DataFrame, +@@ -98,7 +99,7 @@ def engine(request): + + @pytest.fixture( + params=[ +- pytest.param(("numba", True), marks=td.skip_if_no("numba")), ++ pytest.param(("numba", True), marks=[pytest.mark.xfail(condition=not is_platform_little_endian(), reason="Numba may crash on s390x", run=False, strict=False),td.skip_if_no("numba")]), + ("cython", True), + ("cython", False), + ] +--- a/pandas/compat/_optional.py ++++ b/pandas/compat/_optional.py +@@ -4,6 +4,9 @@ import importlib + import sys + import types + import warnings ++import platform ++import re ++warn_numba_platform = "Non-x86 system detected, Numba may give wrong results or crash" if not bool(re.match('i.?86|x86',platform.uname()[4])) else False + + from pandas.util._exceptions import find_stack_level + +@@ -129,6 +132,8 @@ def import_optional_dependency( + """ + + assert errors in {"warn", "raise", "ignore"} ++ if name=='numba' and warn_numba_platform: ++ warnings.warn(warn_numba_platform) + + package_name = INSTALL_MAPPING.get(name) + install_name = package_name if package_name is not None else name +--- a/pandas/tests/groupby/test_numba.py ++++ b/pandas/tests/groupby/test_numba.py +@@ -7,9 +7,17 @@ from pandas import ( + Series, + ) + import pandas._testing as tm +- ++import sys ++try: ++ from numba.core.errors import UnsupportedParforsError,TypingError ++except ImportError: ++ UnsupportedParforsError = ImportError ++ TypingError = ImportError ++from pandas.compat import is_platform_little_endian ++pytestmark = pytest.mark.xfail(condition=not is_platform_little_endian(), reason="Numba may crash on s390x", run=False, strict=False) + + @td.skip_if_no("numba") ++@pytest.mark.xfail(condition=sys.maxsize<2**33, raises=UnsupportedParforsError, reason="some Numba functionality is not available on 32 bit systems", strict=False) + @pytest.mark.filterwarnings("ignore") + # Filter warnings when parallel=True and the function can't be parallelized by Numba + class TestEngine: +--- a/pandas/tests/groupby/test_timegrouper.py ++++ b/pandas/tests/groupby/test_timegrouper.py +@@ -23,6 +23,7 @@ from pandas import ( + import pandas._testing as tm + from pandas.core.groupby.grouper import Grouper + from pandas.core.groupby.ops import BinGrouper ++from pandas.compat import is_platform_little_endian + + + @pytest.fixture +@@ -908,6 +909,7 @@ class TestGroupBy: + tm.assert_series_equal(res, expected) + + @td.skip_if_no("numba") ++ @pytest.mark.xfail(condition=not is_platform_little_endian(), reason="Numba may crash on s390x", run=False, strict=False) + def test_groupby_agg_numba_timegrouper_with_nat( + self, groupby_with_truncated_bingrouper + ): +--- a/pandas/tests/groupby/aggregate/test_numba.py ++++ b/pandas/tests/groupby/aggregate/test_numba.py +@@ -1,6 +1,16 @@ ++import sys ++ + import numpy as np + import pytest + ++try: ++ from numba.core.errors import UnsupportedParforsError,TypingError ++except ImportError: ++ UnsupportedParforsError = ImportError ++ TypingError = ImportError ++ ++from pandas.compat import is_platform_little_endian ++pytestmark = [pytest.mark.xfail(condition=not is_platform_little_endian(), reason="Numba may crash on s390x", run=False, strict=False),pytest.mark.xfail(condition=sys.maxsize<2**33, raises=(UnsupportedParforsError,TypingError), reason="some Numba functionality is not available on 32 bit systems", strict=False)] + from pandas.errors import NumbaUtilError + import pandas.util._test_decorators as td + +@@ -47,6 +57,7 @@ def test_check_nopython_kwargs(): + + + @td.skip_if_no("numba") ++@pytest.mark.xfail(condition=sys.maxsize<2**33, raises=UnsupportedParforsError, reason="some Numba functionality is not available on 32 bit systems", strict=False) + @pytest.mark.filterwarnings("ignore") + # Filter warnings when parallel=True and the function can't be parallelized by Numba + @pytest.mark.parametrize("jit", [True, False]) +@@ -76,6 +87,7 @@ def test_numba_vs_cython(jit, pandas_obj + + + @td.skip_if_no("numba") ++@pytest.mark.xfail(condition=sys.maxsize<2**33, raises=UnsupportedParforsError, reason="some Numba functionality is not available on 32 bit systems", strict=False) + @pytest.mark.filterwarnings("ignore") + # Filter warnings when parallel=True and the function can't be parallelized by Numba + @pytest.mark.parametrize("jit", [True, False]) +--- a/pandas/tests/groupby/transform/test_numba.py ++++ b/pandas/tests/groupby/transform/test_numba.py +@@ -1,3 +1,5 @@ ++import sys ++ + import pytest + + from pandas.errors import NumbaUtilError +@@ -9,6 +11,12 @@ from pandas import ( + option_context, + ) + import pandas._testing as tm ++from pandas.compat import is_platform_little_endian ++try: ++ from numba.core.errors import UnsupportedParforsError,TypingError ++except ImportError: ++ UnsupportedParforsError = ImportError ++ TypingError = ImportError + + + @td.skip_if_no("numba") +@@ -44,6 +52,8 @@ def test_check_nopython_kwargs(): + + + @td.skip_if_no("numba") ++@pytest.mark.xfail(condition=sys.maxsize<2**33, raises=UnsupportedParforsError, reason="some Numba functionality is not available on 32 bit systems", strict=False) ++@pytest.mark.xfail(condition=not is_platform_little_endian(), reason="Numba may crash on s390x", run=False, strict=False) + @pytest.mark.filterwarnings("ignore") + # Filter warnings when parallel=True and the function can't be parallelized by Numba + @pytest.mark.parametrize("jit", [True, False]) +@@ -73,6 +83,8 @@ def test_numba_vs_cython(jit, pandas_obj + + + @td.skip_if_no("numba") ++@pytest.mark.xfail(condition=sys.maxsize<2**33, raises=UnsupportedParforsError, reason="some Numba functionality is not available on 32 bit systems", strict=False) ++@pytest.mark.xfail(condition=not is_platform_little_endian(), reason="Numba may crash on s390x", run=False, strict=False) + @pytest.mark.filterwarnings("ignore") + # Filter warnings when parallel=True and the function can't be parallelized by Numba + @pytest.mark.parametrize("jit", [True, False]) +@@ -114,6 +126,7 @@ def test_cache(jit, pandas_obj, nogil, p + + + @td.skip_if_no("numba") ++@pytest.mark.xfail(condition=not is_platform_little_endian(), reason="Numba may crash on s390x", run=False, strict=False) + def test_use_global_config(): + def func_1(values, index): + return values + 1 +@@ -145,6 +158,7 @@ def test_multifunc_notimplimented(agg_fu + + + @td.skip_if_no("numba") ++@pytest.mark.xfail(condition=not is_platform_little_endian(), reason="Numba may crash on s390x", run=False, strict=False) + def test_args_not_cached(): + # GH 41647 + def sum_last(values, index, n): +@@ -162,6 +176,7 @@ def test_args_not_cached(): + + + @td.skip_if_no("numba") ++@pytest.mark.xfail(condition=not is_platform_little_endian(), reason="Numba may crash on s390x", run=False, strict=False) + def test_index_data_correctly_passed(): + # GH 43133 + def f(values, index): +@@ -203,6 +218,8 @@ def test_engine_kwargs_not_cached(): + + @td.skip_if_no("numba") + @pytest.mark.filterwarnings("ignore") ++@pytest.mark.xfail(condition=sys.maxsize<2**33, raises=UnsupportedParforsError, reason="some Numba functionality is not available on 32 bit systems", strict=False) ++@pytest.mark.xfail(condition=not is_platform_little_endian(), reason="Numba may crash on s390x", run=False, strict=False) + def test_multiindex_one_key(nogil, parallel, nopython): + def numba_func(values, index): + return 1 diff --git a/patches/numpy1p24.patch b/patches/numpy1p24.patch new file mode 100644 index 00000000..1934e12f --- /dev/null +++ b/patches/numpy1p24.patch @@ -0,0 +1,22 @@ +Description: Ignore extra warning from numpy 1.24 + +Author: Rebecca N. Palmer +Forwarded: not-needed (on main, this is .raises due to other changes) + +--- a/pandas/tests/test_downstream.py ++++ b/pandas/tests/test_downstream.py +@@ -105,11 +105,11 @@ def test_construct_dask_float_array_int_ + expected = Series(arr, dtype="i8") + tm.assert_series_equal(res, expected) + +- msg = "In a future version, passing float-dtype values containing NaN" ++ msg = "In a future version, passing float-dtype values containing NaN|invalid value encountered in cast" + arr[2] = np.nan +- with tm.assert_produces_warning(FutureWarning, match=msg): ++ with tm.assert_produces_warning((FutureWarning,RuntimeWarning), match=msg, check_stacklevel=False): + res = Series(darr, dtype="i8") +- with tm.assert_produces_warning(FutureWarning, match=msg): ++ with tm.assert_produces_warning((FutureWarning,RuntimeWarning), match=msg, check_stacklevel=False): + expected = Series(arr, dtype="i8") + tm.assert_series_equal(res, expected) + diff --git a/patches/privacy.patch b/patches/privacy.patch new file mode 100644 index 00000000..93b50397 --- /dev/null +++ b/patches/privacy.patch @@ -0,0 +1,23 @@ +Description: Link to rather than embed Google calendar + +Author: Rebecca N. Palmer +Forwarded: not-needed + +--- a/doc/source/development/community.rst ++++ b/doc/source/development/community.rst +@@ -48,14 +48,10 @@ The agenda for the next meeting and minu + Calendar + -------- + +-This calendar shows all the community meetings. Our community meetings are ++`This calendar `__ shows all the community meetings. Our community meetings are + ideal for anyone wanting to contribute to pandas, or just curious to know how + current development is going. + +-.. raw:: html +- +- +- + You can subscribe to this calendar with the following links: + + * `iCal `__ diff --git a/patches/remove_ccbysa_snippets.patch b/patches/remove_ccbysa_snippets.patch new file mode 100644 index 00000000..1ae2e313 --- /dev/null +++ b/patches/remove_ccbysa_snippets.patch @@ -0,0 +1,264 @@ +Description: Remove code from Stack Overflow + +Stack Overflow content is CC-BY-SA licensed, +which this package is not supposed to be. These snippets may be +too small to be copyrightable, but removing them to be safe. + +https://lists.debian.org/debian-legal/2020/04/threads.html#00018 + +Author: Rebecca N. Palmer +Forwarded: no - deletes some tests/examples without replacement + +--- /dev/null ++++ b/doc/source/user_guide/cookbook.rst +@@ -0,0 +1,22 @@ ++.. _cookbook: ++ ++{{ header }} ++ ++.. _cookbook.idioms: ++.. _cookbook.selection: ++.. _cookbook.multi_index: ++.. _cookbook.missing_data: ++.. _cookbook.grouping: ++.. _cookbook.pivot: ++.. _cookbook.resample: ++.. _cookbook.merge: ++.. _cookbook.plotting: ++.. _cookbook.csv: ++.. _cookbook.csv.multiple_files: ++.. _cookbook.sql: ++.. _cookbook.excel: ++.. _cookbook.html: ++.. _cookbook.hdf: ++.. _cookbook.binary: ++ ++This page has been removed for copyright reasons. +--- a/doc/source/user_guide/index.rst ++++ b/doc/source/user_guide/index.rst +@@ -85,4 +85,3 @@ Guides + scale + sparse + gotchas +- cookbook +--- a/pandas/io/sql.py ++++ b/pandas/io/sql.py +@@ -1832,14 +1832,14 @@ def _get_valid_sqlite_name(name): + # Replace all " with "". + # Wrap the entire thing in double quotes. + +- uname = _get_unicode_name(name) +- if not len(uname): ++ name = _get_unicode_name(name) ++ if not len(name): + raise ValueError("Empty table or column name specified") + +- nul_index = uname.find("\x00") +- if nul_index >= 0: ++ if '\0' in name: + raise ValueError("SQLite identifier cannot contain NULs") +- return '"' + uname.replace('"', '""') + '"' ++ name = name.replace('"', '""') ++ return '"' + name + '"' + + + class SQLiteTable(SQLTable): +--- a/pandas/tests/groupby/aggregate/test_other.py ++++ b/pandas/tests/groupby/aggregate/test_other.py +@@ -25,37 +25,7 @@ import pandas._testing as tm + from pandas.io.formats.printing import pprint_thing + + +-def test_agg_api(): +- # GH 6337 +- # https://stackoverflow.com/questions/21706030/pandas-groupby-agg-function-column-dtype-error +- # different api for agg when passed custom function with mixed frame + +- df = DataFrame( +- { +- "data1": np.random.randn(5), +- "data2": np.random.randn(5), +- "key1": ["a", "a", "b", "b", "a"], +- "key2": ["one", "two", "one", "two", "one"], +- } +- ) +- grouped = df.groupby("key1") +- +- def peak_to_peak(arr): +- return arr.max() - arr.min() +- +- with tm.assert_produces_warning( +- FutureWarning, +- match=r"\['key2'\] did not aggregate successfully", +- ): +- expected = grouped.agg([peak_to_peak]) +- expected.columns = ["data1", "data2"] +- +- with tm.assert_produces_warning( +- FutureWarning, +- match=r"\['key2'\] did not aggregate successfully", +- ): +- result = grouped.agg(peak_to_peak) +- tm.assert_frame_equal(result, expected) + + + def test_agg_datetimes_mixed(): +--- a/pandas/tests/groupby/test_categorical.py ++++ b/pandas/tests/groupby/test_categorical.py +@@ -901,29 +901,6 @@ def test_groupby_empty_with_category(): + tm.assert_series_equal(result, expected) + + +-def test_sort(): +- +- # https://stackoverflow.com/questions/23814368/sorting-pandas- +- # categorical-labels-after-groupby +- # This should result in a properly sorted Series so that the plot +- # has a sorted x axis +- # self.cat.groupby(['value_group'])['value_group'].count().plot(kind='bar') +- +- df = DataFrame({"value": np.random.randint(0, 10000, 100)}) +- labels = [f"{i} - {i+499}" for i in range(0, 10000, 500)] +- cat_labels = Categorical(labels, labels) +- +- df = df.sort_values(by=["value"], ascending=True) +- df["value_group"] = pd.cut( +- df.value, range(0, 10500, 500), right=False, labels=cat_labels +- ) +- +- res = df.groupby(["value_group"], observed=False)["value_group"].count() +- exp = res[sorted(res.index, key=lambda x: float(x.split()[0]))] +- exp.index = CategoricalIndex(exp.index, name=exp.index.name) +- tm.assert_series_equal(res, exp) +- +- + def test_sort2(): + # dataframe groupby sort was being ignored # GH 8868 + df = DataFrame( +--- a/pandas/tests/indexing/multiindex/test_setitem.py ++++ b/pandas/tests/indexing/multiindex/test_setitem.py +@@ -148,37 +148,7 @@ class TestMultiIndexSetItem: + with pytest.raises(TypeError, match=msg): + df.loc["bar"] *= 2 + +- def test_multiindex_setitem2(self): + +- # from SO +- # https://stackoverflow.com/questions/24572040/pandas-access-the-level-of-multiindex-for-inplace-operation +- df_orig = DataFrame.from_dict( +- { +- "price": { +- ("DE", "Coal", "Stock"): 2, +- ("DE", "Gas", "Stock"): 4, +- ("DE", "Elec", "Demand"): 1, +- ("FR", "Gas", "Stock"): 5, +- ("FR", "Solar", "SupIm"): 0, +- ("FR", "Wind", "SupIm"): 0, +- } +- } +- ) +- df_orig.index = MultiIndex.from_tuples( +- df_orig.index, names=["Sit", "Com", "Type"] +- ) +- +- expected = df_orig.copy() +- expected.iloc[[0, 2, 3]] *= 2 +- +- idx = pd.IndexSlice +- df = df_orig.copy() +- df.loc[idx[:, :, "Stock"], :] *= 2 +- tm.assert_frame_equal(df, expected) +- +- df = df_orig.copy() +- df.loc[idx[:, :, "Stock"], "price"] *= 2 +- tm.assert_frame_equal(df, expected) + + def test_multiindex_assignment(self): + +--- a/pandas/tests/io/parser/common/test_common_basic.py ++++ b/pandas/tests/io/parser/common/test_common_basic.py +@@ -379,24 +379,6 @@ def test_trailing_delimiters(all_parsers + tm.assert_frame_equal(result, expected) + + +-def test_escapechar(all_parsers): +- # https://stackoverflow.com/questions/13824840/feature-request-for- +- # pandas-read-csv +- data = '''SEARCH_TERM,ACTUAL_URL +-"bra tv board","http://www.ikea.com/se/sv/catalog/categories/departments/living_room/10475/?se%7cps%7cnonbranded%7cvardagsrum%7cgoogle%7ctv_bord" +-"tv p\xc3\xa5 hjul","http://www.ikea.com/se/sv/catalog/categories/departments/living_room/10475/?se%7cps%7cnonbranded%7cvardagsrum%7cgoogle%7ctv_bord" +-"SLAGBORD, \\"Bergslagen\\", IKEA:s 1700-tals series","http://www.ikea.com/se/sv/catalog/categories/departments/living_room/10475/?se%7cps%7cnonbranded%7cvardagsrum%7cgoogle%7ctv_bord"''' # noqa:E501 +- +- parser = all_parsers +- result = parser.read_csv( +- StringIO(data), escapechar="\\", quotechar='"', encoding="utf-8" +- ) +- +- assert result["SEARCH_TERM"][2] == 'SLAGBORD, "Bergslagen", IKEA:s 1700-tals series' +- +- tm.assert_index_equal(result.columns, Index(["SEARCH_TERM", "ACTUAL_URL"])) +- +- + @xfail_pyarrow + def test_ignore_leading_whitespace(all_parsers): + # see gh-3374, gh-6607 +--- a/pandas/tests/indexing/multiindex/test_chaining_and_caching.py ++++ b/pandas/tests/indexing/multiindex/test_chaining_and_caching.py +@@ -12,31 +12,6 @@ from pandas import ( + import pandas._testing as tm + + +-def test_detect_chained_assignment(using_copy_on_write): +- # Inplace ops, originally from: +- # https://stackoverflow.com/questions/20508968/series-fillna-in-a-multiindex-dataframe-does-not-fill-is-this-a-bug +- a = [12, 23] +- b = [123, None] +- c = [1234, 2345] +- d = [12345, 23456] +- tuples = [("eyes", "left"), ("eyes", "right"), ("ears", "left"), ("ears", "right")] +- events = { +- ("eyes", "left"): a, +- ("eyes", "right"): b, +- ("ears", "left"): c, +- ("ears", "right"): d, +- } +- multiind = MultiIndex.from_tuples(tuples, names=["part", "side"]) +- zed = DataFrame(events, index=["a", "b"], columns=multiind) +- +- if using_copy_on_write: +- zed["eyes"]["right"].fillna(value=555, inplace=True) +- else: +- msg = "A value is trying to be set on a copy of a slice from a DataFrame" +- with pytest.raises(SettingWithCopyError, match=msg): +- zed["eyes"]["right"].fillna(value=555, inplace=True) +- +- + @td.skip_array_manager_invalid_test # with ArrayManager df.loc[0] is not a view + def test_cache_updating(using_copy_on_write): + # 5216 +--- a/pandas/tests/indexing/test_chaining_and_caching.py ++++ b/pandas/tests/indexing/test_chaining_and_caching.py +@@ -407,23 +407,6 @@ class TestChaining: + str(df) + + @pytest.mark.arm_slow +- def test_detect_chained_assignment_undefined_column(self, using_copy_on_write): +- +- # from SO: +- # https://stackoverflow.com/questions/24054495/potential-bug-setting-value-for-undefined-column-using-iloc +- df = DataFrame(np.arange(0, 9), columns=["count"]) +- df["group"] = "b" +- df_original = df.copy() +- +- if using_copy_on_write: +- # TODO(CoW) can we still warn here? +- df.iloc[0:5]["group"] = "a" +- tm.assert_frame_equal(df, df_original) +- else: +- with pytest.raises(SettingWithCopyError, match=msg): +- df.iloc[0:5]["group"] = "a" +- +- @pytest.mark.arm_slow + def test_detect_chained_assignment_changing_dtype( + self, using_array_manager, using_copy_on_write + ): diff --git a/patches/series b/patches/series new file mode 100644 index 00000000..8c9dfe91 --- /dev/null +++ b/patches/series @@ -0,0 +1,27 @@ +deb_nonversioneer_version.patch +deb_doc_donotoverride_PYTHONPATH.patch +xfail_tests_nonintel_io.patch +deb_disable_googleanalytics.patch +mathjax-path.patch +skip_noencoding_locales.patch +use_system_intersphinx.patch +contributor_list_not_in_tarball.patch +tests_dont_assume_endian.patch +fix_random_seeds.patch +xfail_c_locale.patch +privacy.patch +find_test_data.patch +remove_ccbysa_snippets.patch +numba_fail_32bit.patch +hurd_compat.patch +968208_rounding.patch +skip_test_missing_required_dependency.patch +fix_overly_arch_specific_xfails.patch +mips_warning.patch +tests_dont_assume_64bit.patch +armel_ignore_nonwarning.patch +float_to_datetime.patch +no_sphinx_toggleprompt.patch +sphinx_old_pydata_theme.patch +1029251_ignore_rounding_error.patch +numpy1p24.patch diff --git a/patches/skip_noencoding_locales.patch b/patches/skip_noencoding_locales.patch new file mode 100644 index 00000000..f318331e --- /dev/null +++ b/patches/skip_noencoding_locales.patch @@ -0,0 +1,28 @@ +Description: Don't test datetime in locales with no encoding + +Some datetime tests run the test in every available locale. +If this set includes locales without an encoding (currently dsb_DE +and sah_RU), it fails due to Python bug +https://bugs.python.org/issue20088 + +Failure log +https://tests.reproducible-builds.org/debian/rbuild/buster/amd64/pandas_0.23.3+dfsg-3.rbuild.log.gz + +Author: Rebecca N. Palmer +Bug: https://github.com/pandas-dev/pandas/issues/20957 +Forwarded: no + +--- a/pandas/_config/localization.py ++++ b/pandas/_config/localization.py +@@ -108,7 +108,10 @@ def _valid_locales(locales: list[str] | + + + def _default_locale_getter() -> bytes: +- return subprocess.check_output(["locale -a"], shell=True) ++ raw_locales = subprocess.check_output(["locale -a"], shell=True) ++ # skip locales without encoding, to avoid Python bug https://bugs.python.org/issue20088 ++ raw_locales = raw_locales.replace(b'\ndsb_DE\n',b'\n').replace(b'\nsah_RU\n',b'\n').replace(b'\ncrh_UA\n',b'\n') ++ return raw_locales + + + def get_locales( diff --git a/patches/skip_test_missing_required_dependency.patch b/patches/skip_test_missing_required_dependency.patch new file mode 100644 index 00000000..a9841257 --- /dev/null +++ b/patches/skip_test_missing_required_dependency.patch @@ -0,0 +1,15 @@ +Description: Skip test that fails from outside the source tree + +Author: Rebecca N. Palmer +Forwarded: not-needed + +--- a/pandas/tests/test_downstream.py ++++ b/pandas/tests/test_downstream.py +@@ -275,6 +275,7 @@ def test_yaml_dump(df): + tm.assert_frame_equal(df, loaded2) + + ++@pytest.mark.skip(reason="Fails in an installed package as it can't find pandas") + def test_missing_required_dependency(): + # GH 23868 + # To ensure proper isolation, we pass these flags diff --git a/patches/sphinx_old_pydata_theme.patch b/patches/sphinx_old_pydata_theme.patch new file mode 100644 index 00000000..e3847350 --- /dev/null +++ b/patches/sphinx_old_pydata_theme.patch @@ -0,0 +1,34 @@ +Description: Allow building with Debian's pydata-sphinx-theme + +This is currently too old to have all the options upstream expects + +--- a/doc/source/conf.py ++++ b/doc/source/conf.py +@@ -244,12 +244,7 @@ html_theme_options = { + "footer_items": ["pandas_footer", "sphinx-version"], + "github_url": "https://github.com/pandas-dev/pandas", + "twitter_url": "https://twitter.com/pandas_dev", +- "logo": {"image_dark": "https://pandas.pydata.org/static/img/pandas_white.svg"}, +- "navbar_end": ["version-switcher", "theme-switcher", "navbar-icon-links"], +- "switcher": { +- "json_url": "/versions.json", +- "version_match": switcher_version, +- }, ++ "navbar_end": ["navbar-icon-links"], + } + + # Add any paths that contain custom themes here, relative to this directory. +--- a/doc/_templates/sidebar-nav-bs.html ++++ b/doc/_templates/sidebar-nav-bs.html +@@ -1,9 +1,9 @@ + diff --git a/patches/tests_dont_assume_64bit.patch b/patches/tests_dont_assume_64bit.patch new file mode 100644 index 00000000..395bf92e --- /dev/null +++ b/patches/tests_dont_assume_64bit.patch @@ -0,0 +1,107 @@ +Description: Fix test failures on 32-bit systems + +Author: Rebecca N. Palmer +Bug-Debian: partly https://bugs.debian.org/1026351 +Forwarded: no + +--- a/pandas/core/arrays/_ranges.py ++++ b/pandas/core/arrays/_ranges.py +@@ -162,9 +162,7 @@ def _generate_range_overflow_safe_signed + # Putting this into a DatetimeArray/TimedeltaArray + # would incorrectly be interpreted as NaT + raise OverflowError +- # error: Incompatible return value type (got "signedinteger[_64Bit]", +- # expected "int") +- return result # type: ignore[return-value] ++ return int(result) + except (FloatingPointError, OverflowError): + # with endpoint negative and addend positive we risk + # FloatingPointError; with reversed signed we risk OverflowError +@@ -185,9 +183,7 @@ def _generate_range_overflow_safe_signed + i64max = np.uint64(i8max) + assert result > i64max + if result <= i64max + np.uint64(stride): +- # error: Incompatible return value type (got "unsignedinteger", expected +- # "int") +- return result # type: ignore[return-value] ++ return int(result) + + raise OutOfBoundsDatetime( + f"Cannot generate range with {side}={endpoint} and periods={periods}" +--- a/pandas/tests/test_sorting.py ++++ b/pandas/tests/test_sorting.py +@@ -29,6 +29,7 @@ from pandas.core.sorting import ( + lexsort_indexer, + nargsort, + ) ++import sys + + + @pytest.fixture +@@ -226,6 +227,7 @@ class TestSorting: + tm.assert_numpy_array_equal(result, np.array(exp), check_dtype=False) + + ++@pytest.mark.xfail(condition=sys.maxsize<2**33, reason="assumes default int is int64", strict=False)#used to be just the first one but that's been split into several + class TestMerge: + def test_int64_overflow_outer_merge(self): + # #2690, combinatorial explosion +--- a/pandas/tests/frame/test_stack_unstack.py ++++ b/pandas/tests/frame/test_stack_unstack.py +@@ -1,6 +1,7 @@ + from datetime import datetime + from io import StringIO + import itertools ++import sys + + import numpy as np + import pytest +@@ -1862,6 +1863,7 @@ Thu,Lunch,Yes,51.51,17""" + tm.assert_frame_equal(recons, df) + + @pytest.mark.slow ++ @pytest.mark.xfail(condition=sys.maxsize<2**33, reason="assumes default int is int64", strict=False) + def test_unstack_number_of_levels_larger_than_int32(self, monkeypatch): + # GH#20601 + # GH 26314: Change ValueError to PerformanceWarning +--- a/pandas/tests/reshape/test_pivot.py ++++ b/pandas/tests/reshape/test_pivot.py +@@ -4,6 +4,7 @@ from datetime import ( + timedelta, + ) + from itertools import product ++import sys + + import numpy as np + import pytest +@@ -2018,6 +2019,7 @@ class TestPivotTable: + tm.assert_frame_equal(result, expected) + + @pytest.mark.slow ++ @pytest.mark.xfail(condition=sys.maxsize<2**33, reason="assumes default int is int64", strict=False) + def test_pivot_number_of_levels_larger_than_int32(self, monkeypatch): + # GH 20601 + # GH 26314: Change ValueError to PerformanceWarning +--- a/pandas/tests/test_downstream.py ++++ b/pandas/tests/test_downstream.py +@@ -311,7 +311,7 @@ def test_missing_required_dependency(): + for name in ["numpy", "pytz", "dateutil"]: + assert name in output + +- ++@pytest.mark.xfail(condition=sys.maxsize<2**33, reason="different nativesize-int vs int64 type rules", strict=False) + def test_frame_setitem_dask_array_into_new_col(): + # GH#47128 + +--- a/pandas/tests/series/methods/test_round.py ++++ b/pandas/tests/series/methods/test_round.py +@@ -30,8 +30,7 @@ class TestSeriesRound: + def test_round_numpy_with_nan(self, any_float_dtype): + # See GH#14197 + ser = Series([1.53, np.nan, 0.06], dtype=any_float_dtype) +- with tm.assert_produces_warning(None): +- result = ser.round() ++ result = ser.round() # on armhf, numpy warns + expected = Series([2.0, np.nan, 0.0], dtype=any_float_dtype) + tm.assert_series_equal(result, expected) + diff --git a/patches/tests_dont_assume_endian.patch b/patches/tests_dont_assume_endian.patch new file mode 100644 index 00000000..6e19db56 --- /dev/null +++ b/patches/tests_dont_assume_endian.patch @@ -0,0 +1,58 @@ +Description: Fix or skip tests that assume the wrong endianness + +This is a bug in the tests not pandas itself - +the expected values explicitly specify little-endian + +Author: Rebecca N. Palmer +Forwarded: not-needed - upstream fix ad98c2b77 + +--- a/pandas/tests/frame/methods/test_to_records.py ++++ b/pandas/tests/frame/methods/test_to_records.py +@@ -12,6 +12,7 @@ from pandas import ( + date_range, + ) + import pandas._testing as tm ++from pandas.compat import is_platform_little_endian + + + class TestDataFrameToRecords: +@@ -96,7 +97,7 @@ class TestDataFrameToRecords: + + [np.asarray(df.iloc[:, i]) for i in range(3)], + dtype={ + "names": ["A", "level_1", "0", "1", "2"], +- "formats": ["O", "O", "f8", ">f8", ">f8"], + }, + ) + tm.assert_numpy_array_equal(result, expected) +@@ -123,7 +124,7 @@ class TestDataFrameToRecords: + ("2022-01-01", "2022-01-01", "2022-01-01"), + ("2022-01-02", "2022-01-02", "2022-01-02"), + ], +- dtype=[("1", "M8[ns]"), ("2", ">M8[ns]"), ("3", ">M8[ns]")], + ) + + result = df.to_records(index=False) +--- a/pandas/tests/scalar/timedelta/test_arithmetic.py ++++ b/pandas/tests/scalar/timedelta/test_arithmetic.py +@@ -435,7 +435,7 @@ class TestTimedeltaMultiplicationDivisio + + msg = ( + "ufunc '?multiply'? cannot use operands with types " +- r"dtype\(']m8\[ns\]'\) and dtype\('[<>]m8\[ns\]'\)" + ) + with pytest.raises(TypeError, match=msg): + td * other +--- a/pandas/tests/arrays/floating/test_arithmetic.py ++++ b/pandas/tests/arrays/floating/test_arithmetic.py +@@ -162,7 +162,7 @@ def test_error_invalid_values(data, all_ + "not all arguments converted during string formatting", + "can't multiply sequence by non-int of type 'float'", + "ufunc 'subtract' cannot use operands with types dtype", +- r"ufunc 'add' cannot use operands with types dtype\(']M8\[ns\]'\)", + r"ufunc 'add' cannot use operands with types dtype\('float\d{2}'\)", + "cannot subtract DatetimeArray from ndarray", + ] diff --git a/patches/use_system_intersphinx.patch b/patches/use_system_intersphinx.patch new file mode 100644 index 00000000..cc27315d --- /dev/null +++ b/patches/use_system_intersphinx.patch @@ -0,0 +1,27 @@ +Description: Use packaged intersphinx indexes + +Author: Rebecca N. Palmer +Bug-Debian: https://bugs.debian.org/876417 +Forwarded: not-needed + +--- a/doc/source/conf.py ++++ b/doc/source/conf.py +@@ -449,12 +449,12 @@ latex_documents = [ + if include_api: + intersphinx_mapping = { + "dateutil": ("https://dateutil.readthedocs.io/en/latest/", None), +- "matplotlib": ("https://matplotlib.org/stable/", None), +- "numpy": ("https://numpy.org/doc/stable/", None), +- "pandas-gbq": ("https://pandas-gbq.readthedocs.io/en/latest/", None), +- "py": ("https://pylib.readthedocs.io/en/latest/", None), +- "python": ("https://docs.python.org/3/", None), +- "scipy": ("https://docs.scipy.org/doc/scipy/", None), ++ "matplotlib": ("https://matplotlib.org/stable/", None), # no longer has a -doc in Debian "/usr/share/doc/python-matplotlib-doc/html/objects.inv" ++ "numpy": ("https://numpy.org/doc/stable/", None), # no longer has a -doc in Debian "/usr/share/doc/python-numpy-doc/html/objects.inv" ++ "pandas-gbq": ("https://pandas-gbq.readthedocs.io/en/latest/", None), # not in Debian ++ "py": ("https://pylib.readthedocs.io/en/latest/", None), # no -doc in Debian ++ "python": ("https://docs.python.org/3/", "/usr/share/doc/python3-doc/html/objects.inv"), ++ "scipy": ("https://docs.scipy.org/doc/scipy/", ("/usr/share/doc/python-scipy-doc/html/objects.inv","/usr/share/doc/python-scipy/html/objects.inv")), + "pyarrow": ("https://arrow.apache.org/docs/", None), + } + diff --git a/patches/xfail_c_locale.patch b/patches/xfail_c_locale.patch new file mode 100644 index 00000000..c6349bc5 --- /dev/null +++ b/patches/xfail_c_locale.patch @@ -0,0 +1,15 @@ +Description: Xfail a test that doesn't work in the C locale + +Author: Rebecca N. Palmer +Forwarded: no + +--- a/pandas/tests/config/test_localization.py ++++ b/pandas/tests/config/test_localization.py +@@ -132,6 +132,7 @@ def test_set_locale(lang, enc): + assert before_locale == after_locale + + ++@pytest.mark.xfail(strict=False,reason="fails in C locale") + def test_encoding_detected(): + system_locale = os.environ.get("LC_ALL") + system_encoding = system_locale.split(".")[-1] if system_locale else "utf-8" diff --git a/patches/xfail_tests_nonintel_io.patch b/patches/xfail_tests_nonintel_io.patch new file mode 100644 index 00000000..2dd0a1cc --- /dev/null +++ b/patches/xfail_tests_nonintel_io.patch @@ -0,0 +1,286 @@ +Description: HDF5 and Stata I/O are broken on some architectures + +Fix some issues, warn on use and xfail tests for the remainder + +armhf TestHDF5Store::test*encoding only sometimes crashes +(1.1.3+dfsg-1 passed on build but failed autopkgtest) + +HDF5 and Stata are known to fail on big-endian architectures +Stata also fails on qemu-ppc64el, but not real ppc64el + +Author: Andreas Tille , Graham Inggs , Yaroslav Halchenko , Rebecca N. Palmer +Bug-Debian: https://bugs.debian.org/877419 +Forwarded: no + +--- a/pandas/io/pytables.py ++++ b/pandas/io/pytables.py +@@ -27,6 +27,10 @@ from typing import ( + overload, + ) + import warnings ++import platform ++import re ++from pandas.compat import is_platform_little_endian ++warn_hdf_platform = "Non-x86 system detected, HDF(5) format I/O may give wrong results (particularly on files created with older versions) or crash - https://bugs.debian.org/877419" if not bool(re.match('i.?86|x86',platform.uname()[4])) else False + + import numpy as np + +@@ -552,6 +556,8 @@ class HDFStore: + fletcher32: bool = False, + **kwargs, + ) -> None: ++ if warn_hdf_platform: ++ warnings.warn(warn_hdf_platform) + + if "format" in kwargs: + raise ValueError("format is not a defined argument for HDFStore") +@@ -773,7 +779,10 @@ class HDFStore: + self._handle.flush() + if fsync: + with suppress(OSError): +- os.fsync(self._handle.fileno()) ++ if is_platform_little_endian(): ++ os.fsync(self._handle.fileno()) ++ else: ++ os.sync() # due to a pytables bad-cast bug, fileno is invalid on 64-bit big-endian# + + def get(self, key: str): + """ +--- a/pandas/io/stata.py ++++ b/pandas/io/stata.py +@@ -28,6 +28,9 @@ from typing import ( + cast, + ) + import warnings ++import platform ++import re ++warn_stata_platform = "Non-x86 system detected, Stata format I/O may give wrong results (particularly on strings) - https://bugs.debian.org/877419" if not bool(re.match('i.?86|x86',platform.uname()[4])) else False + + from dateutil.relativedelta import relativedelta + import numpy as np +@@ -970,6 +973,8 @@ class StataParser: + # NOTE: the byte type seems to be reserved for categorical variables + # with a label, but the underlying variable is -127 to 100 + # we're going to drop the label and cast to int ++ if warn_stata_platform: ++ warnings.warn(warn_stata_platform) + self.DTYPE_MAP = dict( + list(zip(range(1, 245), [np.dtype("a" + str(i)) for i in range(1, 245)])) + + [ +--- a/pandas/tests/io/pytables/test_file_handling.py ++++ b/pandas/tests/io/pytables/test_file_handling.py +@@ -22,6 +22,10 @@ from pandas.tests.io.pytables.common imp + ensure_clean_store, + tables, + ) ++import platform ++import re ++import sys ++is_crashing_arch=bool((platform.uname()[4].startswith('arm') or platform.uname()[4].startswith('aarch')) and sys.maxsize<2**33) # meant for armhf, though this form will also skip on armel - uname = kernel arch + + from pandas.io import pytables as pytables + from pandas.io.pytables import Term +@@ -263,6 +267,7 @@ def test_complibs(setup_path): + h5table.close() + + ++@pytest.mark.xfail(condition=is_crashing_arch,reason="https://bugs.debian.org/790925",strict=False,run=False) + @pytest.mark.skipif( + not is_platform_little_endian(), reason="reason platform is not little endian" + ) +@@ -296,6 +301,7 @@ def test_encoding(setup_path): + ], + ) + @pytest.mark.parametrize("dtype", ["category", object]) ++@pytest.mark.xfail(condition=is_crashing_arch,reason="https://bugs.debian.org/790925",strict=False,run=False) + def test_latin_encoding(setup_path, dtype, val): + enc = "latin-1" + nan_rep = "" +--- a/pandas/tests/io/pytables/test_append.py ++++ b/pandas/tests/io/pytables/test_append.py +@@ -23,6 +23,10 @@ from pandas.tests.io.pytables.common imp + ensure_clean_path, + ensure_clean_store, + ) ++import platform ++import re ++import sys ++is_crashing_arch=bool((platform.uname()[4].startswith('arm') or platform.uname()[4].startswith('aarch')) and sys.maxsize<2**33) # meant for armhf, though this form will also skip on armel - uname = kernel arch + + pytestmark = pytest.mark.single_cpu + +@@ -276,6 +280,7 @@ def test_append_all_nans(setup_path): + tm.assert_frame_equal(store["df2"], df) + + ++@pytest.mark.xfail(condition=is_crashing_arch,reason="https://bugs.debian.org/790925",strict=False,run=False) + def test_append_frame_column_oriented(setup_path): + with ensure_clean_store(setup_path) as store: + +--- a/pandas/tests/io/pytables/test_store.py ++++ b/pandas/tests/io/pytables/test_store.py +@@ -39,6 +39,10 @@ from pandas.io.pytables import ( + HDFStore, + read_hdf, + ) ++import platform ++import re ++import sys ++is_crashing_arch=bool((platform.uname()[4].startswith('arm') or platform.uname()[4].startswith('aarch')) and sys.maxsize<2**33) # meant for armhf, though this form will also skip on armel - uname = kernel arch + + pytestmark = pytest.mark.single_cpu + +@@ -790,6 +794,7 @@ def test_start_stop_fixed(setup_path): + df.iloc[8:10, -2] = np.nan + + ++@pytest.mark.xfail(condition=is_crashing_arch,reason="https://bugs.debian.org/790925",strict=False,run=False) + def test_select_filter_corner(setup_path): + + df = DataFrame(np.random.randn(50, 100)) +--- a/pandas/tests/io/pytables/test_read.py ++++ b/pandas/tests/io/pytables/test_read.py +@@ -5,7 +5,7 @@ import numpy as np + import pytest + + from pandas._libs.tslibs import Timestamp +-from pandas.compat import is_platform_windows ++from pandas.compat import is_platform_windows, is_platform_little_endian + + import pandas as pd + from pandas import ( +@@ -155,6 +155,7 @@ def test_pytables_native2_read(datapath) + assert isinstance(d1, DataFrame) + + ++@pytest.mark.xfail(condition=not is_platform_little_endian(),reason="known failure of hdf on non-little endian",strict=False,raises=AttributeError) + def test_legacy_table_fixed_format_read_py2(datapath): + # GH 24510 + # legacy table with fixed format written in Python 2 +@@ -170,6 +171,7 @@ def test_legacy_table_fixed_format_read_ + tm.assert_frame_equal(expected, result) + + ++@pytest.mark.xfail(condition=not is_platform_little_endian(),reason="known failure of hdf on non-little endian",strict=False,raises=AttributeError) + def test_legacy_table_fixed_format_read_datetime_py2(datapath): + # GH 31750 + # legacy table with fixed format and datetime64 column written in Python 2 +@@ -319,6 +321,7 @@ def test_read_hdf_series_mode_r(format, + tm.assert_series_equal(result, series) + + ++@pytest.mark.xfail(condition=not is_platform_little_endian(),reason="known failure of hdf on non-little endian",strict=False,raises=AttributeError) + def test_read_py2_hdf_file_in_py3(datapath): + # GH 16781 + +--- a/pandas/tests/io/test_stata.py ++++ b/pandas/tests/io/test_stata.py +@@ -36,6 +36,8 @@ from pandas.io.stata import ( + read_stata, + ) + ++from pandas.compat import is_platform_little_endian ++pytestmark = pytest.mark.xfail(condition=not is_platform_little_endian(),reason="known failure of test_stata on non-little endian",strict=False) + + @pytest.fixture + def mixed_frame(): +@@ -148,7 +150,7 @@ class TestStata: + # ) + + # Remove resource warnings +- w = [x for x in w if x.category is UserWarning] ++ w = [x for x in w if x.category is UserWarning and not "Non-x86 system detected" in str(x.message)] + + # should get warning for each call to read_dta + assert len(w) == 3 +@@ -414,7 +416,7 @@ class TestStata: + warnings.simplefilter("always", InvalidColumnName) + original.to_stata(path, convert_dates=None, version=version) + # should get a warning for that format. +- assert len(w) == 1 ++ assert len([x for x in w if not "Non-x86 system detected" in str(x.message)]) == 1 + + written_and_read_again = self.read_dta(path) + tm.assert_frame_equal(written_and_read_again.set_index("index"), formatted) +@@ -1759,8 +1761,9 @@ the string values returned are correct." + encoded = read_stata( + datapath("io", "data", "stata", "stata1_encoding_118.dta") + ) +- assert len(w) == 151 +- assert w[0].message.args[0] == msg ++ w2 = [x for x in w if not "Non-x86 system detected" in str(x.message)] ++ assert len(w2) == 151 ++ assert w2[0].message.args[0] == msg + + expected = DataFrame([["Düsseldorf"]] * 151, columns=["kreis1849"]) + tm.assert_frame_equal(encoded, expected) +--- a/pandas/tests/io/pytables/test_timezones.py ++++ b/pandas/tests/io/pytables/test_timezones.py +@@ -8,6 +8,7 @@ import pytest + + from pandas._libs.tslibs.timezones import maybe_get_tz + import pandas.util._test_decorators as td ++from pandas.compat import is_platform_little_endian + + import pandas as pd + from pandas import ( +@@ -304,6 +305,7 @@ def test_store_timezone(setup_path): + tm.assert_frame_equal(result, df) + + ++@pytest.mark.xfail(condition=not is_platform_little_endian(),reason="known failure of hdf on non-little endian",strict=False,raises=AttributeError) + def test_legacy_datetimetz_object(datapath): + # legacy from < 0.17.0 + # 8260 +@@ -356,6 +358,7 @@ def test_read_with_where_tz_aware_index( + tm.assert_frame_equal(result, expected) + + ++@pytest.mark.xfail(condition=not is_platform_little_endian(),reason="known failure of hdf on non-little endian",strict=False,raises=AttributeError) + def test_py2_created_with_datetimez(datapath): + # The test HDF5 file was created in Python 2, but could not be read in + # Python 3. +--- a/pandas/tests/io/test_common.py ++++ b/pandas/tests/io/test_common.py +@@ -16,7 +16,7 @@ import tempfile + + import pytest + +-from pandas.compat import is_platform_windows ++from pandas.compat import is_platform_windows, is_platform_little_endian + import pandas.util._test_decorators as td + + import pandas as pd +@@ -301,11 +301,11 @@ Look,a snake,🐍""" + "pyarrow", + ("io", "data", "feather", "feather-0_3_1.feather"), + ), +- ( ++ pytest.param( + pd.read_hdf, + "tables", + ("io", "data", "legacy_hdf", "datetimetz_object.h5"), +- ), ++ marks=pytest.mark.xfail(condition=not is_platform_little_endian(),reason="known failure of hdf on non-little endian",strict=False,raises=AttributeError)), + (pd.read_stata, "os", ("io", "data", "stata", "stata10_115.dta")), + (pd.read_sas, "os", ("io", "sas", "data", "test1.sas7bdat")), + (pd.read_json, "os", ("io", "json", "data", "tsframe_v012.json")), +--- a/pandas/_testing/_warnings.py ++++ b/pandas/_testing/_warnings.py +@@ -13,6 +13,7 @@ from typing import ( + cast, + ) + import warnings ++import platform + + + @contextmanager +@@ -178,6 +179,8 @@ def _assert_caught_no_extra_warnings( + # due to these open files. + if any("matplotlib" in mod for mod in sys.modules): + continue ++ if actual_warning.category==UserWarning and "Non-x86 system detected" in str(actual_warning.message) and not bool(re.match('i.?86|x86',platform.uname()[4])): ++ continue + + extra_warnings.append( + ( diff --git a/python-pandas-doc.doc-base b/python-pandas-doc.doc-base new file mode 100644 index 00000000..b29cae02 --- /dev/null +++ b/python-pandas-doc.doc-base @@ -0,0 +1,7 @@ +Document: python3-pandas +Title: pandas - powerful Python data analysis toolkit +Section: Science/Data Analysis + +Format: HTML +Index: /usr/share/doc/python-pandas-doc/html/index.html +Files: /usr/share/doc/python-pandas-doc/html/* diff --git a/python-pandas-doc.docs b/python-pandas-doc.docs new file mode 100644 index 00000000..8137b041 --- /dev/null +++ b/python-pandas-doc.docs @@ -0,0 +1 @@ +doc/build/html diff --git a/python-pandas-doc.links b/python-pandas-doc.links new file mode 100644 index 00000000..718f2af1 --- /dev/null +++ b/python-pandas-doc.links @@ -0,0 +1,3 @@ +usr/share/doc/python-pandas-doc/html/whatsnew/index.html.gz usr/share/doc/python-pandas-doc/NEWS.html.gz +usr/share/doc/python-pandas-doc/html/whatsnew/index.html.gz usr/share/doc/python3-pandas/NEWS.html.gz +usr/share/javascript/mathjax/MathJax.js usr/share/doc/python-pandas-doc/html/_static/MathJax.js diff --git a/python3-pandas.lintian-overrides b/python3-pandas.lintian-overrides new file mode 100644 index 00000000..d0868ca8 --- /dev/null +++ b/python3-pandas.lintian-overrides @@ -0,0 +1,4 @@ +# these are test data, not user-facing text +python3-pandas: national-encoding [usr/lib/python3/dist-packages/pandas/tests/io/data/xml/baby_names.xml] +python3-pandas: package-contains-documentation-outside-usr-share-doc [usr/lib/python3/dist-packages/pandas/tests/io/data/gbq_fake_job.txt] +python3-pandas: package-contains-documentation-outside-usr-share-doc [usr/lib/python3/dist-packages/pandas/tests/io/data/fixed_width/fixed_width_format.txt] diff --git a/rules b/rules new file mode 100755 index 00000000..7e3b0627 --- /dev/null +++ b/rules @@ -0,0 +1,118 @@ +#!/usr/bin/make -f +# -*- mode: makefile; coding: utf-8 -*- + +export DEB_BUILD_MAINT_OPTIONS = hardening=+all +DPKG_EXPORT_BUILDFLAGS = 1 +include /usr/share/dpkg/buildflags.mk +include /usr/share/dpkg/pkg-info.mk + +PY3VERS := $(shell py3versions -vr) +PY3VER := $(shell py3versions -vd) +SOURCE_DATE:=$(shell date -u -d "@$(SOURCE_DATE_EPOCH)" "+%a, %d %b %Y" || echo "xxx, xx xxx xxxx") +SOURCE_TIME:=$(shell date -u -d "@$(SOURCE_DATE_EPOCH)" "+%T" || echo "xx:xx:xx") + +UVER := $(shell echo $(DEB_VERSION_UPSTREAM) | sed -e 's,+dfsg,,g') +# Python doesn't use ~ for rc +UVER_PY := $(shell echo $(UVER) | sed -e 's,[~],,g') +UVER_PYSHORT := $(shell echo $(UVER_PY) | sed -e 's,+git.*,,g') + +# Filter out tests with "marker expressions" and "keyword expressions". Ref: pytest(1) +ifeq ($(DEB_HOST_ARCH),$(filter $(DEB_HOST_ARCH), amd64 i386 kfreebsd-amd64 kfreebsd-i386 x32)) + PYTEST_MARKER := not network +else + PYTEST_MARKER := not network and not slow +endif +# for matplotlib etc +export HOME=$(CURDIR)/buildtmp + +# Split up the test suite to avoid running out of memory, use xvfb for plot tests, run but ignore potentially crashing tests; test_register_entrypoint expects an installed package, test_wrong_url needs internet, test_statsmodels is a circular dependency when adding a new Python version +# The echo-random-characters is to allow searching for fails that don't show the usual test failure message i.e. crashes/errors +# -v makes the log too long for salsa-ci +export PYBUILD_TEST_ARGS=TEST_SUCCESS=true; cd {build_dir} ; for TEST_SUBSET in {build_dir}/pandas/tests/* ; do PANDAS_CI=1 LOCALE_OVERRIDE=C xvfb-run -a -s "-screen 0 1280x1024x24 -noreset" {interpreter} -m pytest -s -m "$(PYTEST_MARKER)" -k "not test_register_entrypoint and not test_wrong_url and not test_statsmodels" --confcutdir={build_dir}/pandas --deb-data-root-dir={dir}/pandas/tests --strict-data-files $$TEST_SUBSET || test $$? = 5 || TEST_SUCCESS=false && echo "rdjoqkol test state = $$TEST_SUCCESS"; done ; PANDAS_CI=1 LOCALE_OVERRIDE=C {interpreter} -m pytest -s -m "$(PYTEST_MARKER)" --forked --runxfail --confcutdir={build_dir}/pandas --deb-data-root-dir={dir}/pandas/tests --strict-data-files {build_dir}/pandas/tests/groupby/test_numba.py {build_dir}/pandas/tests/groupby/test_timegrouper.py {build_dir}/pandas/tests/groupby/transform/test_numba.py {build_dir}/pandas/tests/groupby/aggregate/test_numba.py {build_dir}/pandas/tests/window/test_numba.py {build_dir}/pandas/tests/window/test_apply.py {build_dir}/pandas/tests/window/test_online.py {build_dir}/pandas/tests/window/moments/test_moments_consistency_expanding.py || true ; rm -f test-data.xml ; $$TEST_SUCCESS + +export PYBUILD_EXT_DESTDIR=debian/python3-pandas-lib +export PYBUILD_DESTDIR=debian/python3-pandas + +# try to prevent unsanctioned downloads +export http_proxy=http://127.0.0.1:9/ +export https_proxy=http://127.0.0.1:9/ + +export SHELL=/bin/bash + +# Mega rule +%: + : # Explicit build system to avoid use of all-in-1 Makefile + dh $@ --buildsystem=pybuild --with python3,numpy3,sphinxdoc + +# The *cython* rules are provided to allow using pre-built Cython files in distributions without a new enough Cython; they are not (and must not be) used in official Debian builds (including -backports). Use instructions: +# on a system with new enough Cython, run debian/rules cythonize - this will add a directory under debian/ +# uncomment the _uncythonize rule dependency below +# remove the cython3 Build-Depends from d/control +# copy to the older system and build as normal +# To upgrade to a new upstream version, this process must be repeated +# Warning - has not been tested for some time +_cythonize%: override_dh_clean # force removal of previous copies + python$(*:2=) setup.py cython + D=debian/cythonized-files$(*:2=) && \ + git rm -rf $$D || rm -rf $$D; \ + find pandas/ -regex '.*\.c\(\|pp\)' | while read f; do \ + grep -q 'Generated by Cython' "$$f" || continue; \ + mkdir -p "$$D/$$(dirname $$f)"; \ + cp "$$f" "$$D/$$(dirname $$f)"; \ + git add -f "$$D/$$f" || true; \ + done; \ + echo "$(UVER)" >| $$D/VERSION; git add $$D/VERSION || true + +_uncythonize%: + : # Make sure that cythonized sources are up-to-date + [ "$(UVER)" = "`cat debian/cythonized-files3/VERSION`" ] + echo "$*" | grep -q '^3' && PY=3 || PY= ; \ + echo "I: Using pre-Cython-ed files for Python $*"; \ + cd debian/cythonized-files$$PY/ ; \ + find . -regex '.*\.c\(\|pp\)' | while read f; do cp $$f ../../$$f; done + +cythonize: _cythonize3 + +override_dh_clean: + find pandas/ -regex '.*\.c\(\|pp\)' | xargs grep -l -e 'Generated by Cython' | xargs -r rm -f + rm -rf build buildtmp doc/build *-stamp # pandas.egg-info pandas/datasets/__config__.py + rm -rf doc/source/savefig + dh_clean + +override_dh_auto_build-arch: # ${PY3VERS:%=_uncythonize%} + mkdir -p buildtmp + [ -e pandas/__version.py ] || \ + echo -e "version = '$(UVER_PY)'\nshort_version = '$(UVER_PYSHORT)'" > pandas/__version.py + dh_auto_build + +override_dh_auto_build-indep: override_dh_auto_build-arch +ifeq (docdisabled,$(filter nodoc,$(DEB_BUILD_OPTIONS))) + : # Build Documentation + cd doc && PYTHONPATH=$(CURDIR)/.pybuild/cpython3_$(PY3VER)/build LC_ALL=C python3 make.py html + # strip build paths and statsmodels timestamps for reproducibility, and online Javascript for privacy + for html in `find doc/build/html -name _modules -prune -o -name "*.html" -o -name "*.ipynb"` ; do \ + sed -i -e 's#$(CURDIR)/.pybuild/[^/]*/build/pandas/#/usr/lib/python3/dist-packages/pandas/#g' \ + -e 's#$(CURDIR)/debian/python3-pandas/usr/lib/python3/dist-packages/pandas/#/usr/lib/python3/dist-packages/pandas/#g' \ + -e 's#\(Date:.*\)[A-Z][a-z]\+, \+[0-9]\+,\? \+[A-Z][a-z]\+,\? \+[0-9]\+#\1$(SOURCE_DATE)#g' \ + -e 's#\(Time:.*\)[0-9][0-9]:[0-9][0-9]:[0-9][0-9]#\1$(SOURCE_TIME)#g' $${html} ; \ + done +endif + +override_dh_installdocs: + #dh_installdocs -A *.md + ## for NEWS.html.gz - put it here and use symlinks to avoid breaking internal links + #gzip -c -n -9 debian/python-pandas-doc/usr/share/doc/python-pandas-doc/html/whatsnew/index.html > debian/python-pandas-doc/usr/share/doc/python-pandas-doc/html/whatsnew/index.html.gz || true + #cp -av debian/contributors_list.txt debian/python-pandas-doc/usr/share/doc/python-pandas-doc || true + ## deduplicate files - the ||true is because we only build-depend on jdupes if we're building documentation + #jdupes -r -l debian/python-pandas-doc/usr/share/doc || true + + +## immediately useable documentation and exemplar scripts/data +override_dh_compress: + dh_compress -X.py -X.html -X.pdf -X.css -X.jpg -X.txt -X.js -X.json -X.rtc -Xobjects.inv + +# see PYBUILD_TEST_ARGS above +override_dh_auto_test: +ifeq (testsuitedisabled,$(filter nocheck,$(DEB_BUILD_OPTIONS))) + PYBUILD_SYSTEM=custom dh_auto_test +endif diff --git a/salsa-ci.yml b/salsa-ci.yml new file mode 100644 index 00000000..e7d2961b --- /dev/null +++ b/salsa-ci.yml @@ -0,0 +1,14 @@ +--- +include: + - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml + - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml +variables: +# what triggers source-is-missing seems different between lintian.d.o, salsa-ci and local: possibly version dependent? + SALSA_CI_LINTIAN_SUPPRESS_TAGS: "mismatched-override" + SALSA_CI_LINTIAN_FAIL_WARNING: 1 +# clearer errors from reproducibility test + SALSA_CI_REPROTEST_ENABLE_DIFFOSCOPE: 1 +# known not currently reproducible + SALSA_CI_DISABLE_REPROTEST: 1 +# long and mostly duplicates the build-time test + SALSA_CI_DISABLE_AUTOPKGTEST: 1 diff --git a/source/format b/source/format new file mode 100644 index 00000000..163aaf8d --- /dev/null +++ b/source/format @@ -0,0 +1 @@ +3.0 (quilt) diff --git a/source/lintian-overrides b/source/lintian-overrides new file mode 100644 index 00000000..e2653a01 --- /dev/null +++ b/source/lintian-overrides @@ -0,0 +1,5 @@ +# long lines in test data are not a bug +very-long-line-length-in-source-file * [pandas/tests/io/data/*] +very-long-line-length-in-source-file * [pandas/tests/io/sas/data/*] +# long lines also don't equal actually missing source +source-is-missing [pandas/tests/io/data/html/*] diff --git a/source/options b/source/options new file mode 100644 index 00000000..e558c0fc --- /dev/null +++ b/source/options @@ -0,0 +1 @@ +extend-diff-ignore="^[^/]+\.egg-info/|pandas/__version.py" diff --git a/tests/control b/tests/control new file mode 100644 index 00000000..e7d08b70 --- /dev/null +++ b/tests/control @@ -0,0 +1,58 @@ +# Check that the hard Depends are enough for import +# cd to not-the-source-directory to get the installed pandas +Test-Command: cd "$AUTOPKGTEST_TMP" && python3 -c "import pandas;a=pandas.DataFrame([[1,2],[3,4]])" +Depends: python3-pandas +Restrictions: allow-stderr + +# According to pandas/doc/source/install.rst, running the unit tests looks like: +# `py.test-3 --skip-slow --skip-network /usr/lib/python3/dist-packages/pandas/ -v -rs` +# Or simply `python3 -c "import pandas as pd; pd.test()"`, which doesn't require +# us to specify the path (pandas.__path__) in command line. +# See: pandas/util/_tester.py +Tests: unittests3 +# xml test_wrong_url fails without ca-certificates +Depends: python3-pandas, + ca-certificates, + locales-all, + python3-all, +# we don't have this version python3-blosc (>= 1.21.0~), + python3-bottleneck (>= 1.3.2~), + python3-bs4 (>= 4.9.3~), + python3-dask (>= 2.10.1~), + python3-dateutil, + python3-fsspec (>= 2021.07.0~), + python3-html5lib (>= 1.1~), + python3-hypothesis (>= 6.13.0~), + python3-jinja2 (>= 3.0~), + python3-lxml (>= 4.6.3~), + python3-matplotlib (>= 3.3.2~) [!ia64 !sh4 !x32], +# armel, s390x numba crash, mipsel gives wrong answer, most ports don't have numba +# uninstallable due to #1024795 python3-numba (>= 0.53.1~) [amd64 arm64 armhf i386 mips64el mipsel ppc64el s390x], + python3-numexpr (>= 2.8.0~), + python3-numpy (>= 1:1.18.5~), + python3-odf (>= 1.4.1~), + python3-openpyxl (>= 3.0.7~), +# doesn't seem to work in this test environment python3-psycopg2 (>= 2.8.6~), +# doesn't seem to work in this test environment python3-pymysql (>= 1.0.2~), + python3-pytest (>= 6.0~), + python3-pytest-asyncio (>= 0.17~), + python3-pytest-forked, + python3-pytest-xdist (>= 1.31~), + python3-scipy, + python3-setuptools (>= 51~), + python3-six, +# we don't have this version python3-snappy (>= 0.6.0~), + python3-sqlalchemy (>= 1.4.16~), + python3-tables (>= 3.6.1~), + python3-tabulate (>= 0.8.9~), + python3-tk, + python3-tz (>= 2022.1~), + python3-xarray (>= 0.19.0~), +# we don't have this version python3-xlrd (>= 2.0.1~), + python3-xlsxwriter (>= 1.4.3~), +# having xlwt and not xlrd breaks tests/io/test_fsspec.py python3-xlwt (>= 1.3.0~), + python3-zstandard, + xauth, + xvfb, + xclip, +Restrictions: allow-stderr, needs-internet diff --git a/tests/unittests3 b/tests/unittests3 new file mode 100755 index 00000000..d8a60d94 --- /dev/null +++ b/tests/unittests3 @@ -0,0 +1,29 @@ +#!/bin/bash +set -eu +set -x + +arch=$(dpkg --print-architecture) +pys="$(py3versions -s 2>/dev/null)" +sourcetestroot="$PWD/pandas/tests" + +# Debian: Enable "slow" tests on x86 to keep the code coverage. +# Ubuntu: Disable "slow" tests on ALL architectures. +if (echo amd64 i386 | grep $arch >/dev/null) && [ "Debian" = $(dpkg-vendor --query vendor) ]; then + marker='' +else + marker='not slow' +fi + +cd "$AUTOPKGTEST_TMP" +# Run in sections to avoid out-of-memory crash (#943732) +# exit code 5 means no tests in this file +TEST_SUCCESS=true +for py in $pys; do + echo "=== $py ===" + modpath=$($py -c 'import pandas as pd; print(pd.__path__[0])') + for TEST_SUBSET in $modpath/tests/* ; do + PANDAS_CI=1 LC_ALL=C.UTF-8 xvfb-run --auto-servernum --server-args="-screen 0 1024x768x24" \ + $py -m pytest --tb=long -s -v -m "$marker" --deb-data-root-dir=$sourcetestroot --strict-data-files --confcutdir=$modpath $TEST_SUBSET 2>&1 || test $? == 5 || TEST_SUCCESS=false + done +done +$TEST_SUCCESS diff --git a/upstream/metadata b/upstream/metadata new file mode 100644 index 00000000..5b320845 --- /dev/null +++ b/upstream/metadata @@ -0,0 +1,14 @@ +Bug-Submit: https://github.com/pydata/pandas/issues/new +Repository: https://github.com/pydata/pandas.git +Documentation: https://pandas.pydata.org/pandas-docs/stable +Bug-Database: https://github.com/pydata/pandas/issues +Contact: https://pandas.pydata.org/community.html +Reference: + Title: "pandas: a Foundational Python Library for Data Analysis and Statistics" + Eprint: https://www.scribd.com/doc/71048089/pandas-a-Foundational-Python-Library-for-Data-Analysis-and-Statistics + Author: McKinney, Wes + Booktitle: presented at PyHPC + Year: 2011 +Other-References: https://pandas.pydata.org/talks.html +Repository-Browse: https://github.com/pydata/pandas +Security-Contact: https://github.com/pydata/pandas/tree/HEAD/.github/SECURITY.md diff --git a/watch b/watch new file mode 100644 index 00000000..6c46ad9d --- /dev/null +++ b/watch @@ -0,0 +1,3 @@ +version=4 +opts="dversionmangle=s/.dfsg[0-9]*$//,uversionmangle=s/v//;s/rc/~rc/,filenamemangle=s/.*\/(.*)/pandas-$1\.tar\.gz/,repacksuffix=+dfsg" \ + https://github.com/pydata/pandas/tags .*/v?([\d\.]+).tar.gz