From: Andreas Tille Date: Tue, 11 Feb 2014 16:20:30 +0000 (+0100) Subject: Hopefully finalising debian/copyright X-Git-Tag: archive/raspbian/0.22.0+ds-1+rpi1~1^2^2~407 X-Git-Url: https://dgit.raspbian.org/?a=commitdiff_plain;h=9dbdfc4916f65e9b31147a20ccb16b72f9cfa56f;p=python-pysam.git Hopefully finalising debian/copyright --- diff --git a/debian/copyright b/debian/copyright index 9359c6d..85b2e3d 100644 --- a/debian/copyright +++ b/debian/copyright @@ -7,7 +7,7 @@ Files: * Copyright: 2008-2010 Genome Research Ltd. License: MIT -Files: samtools/khash.h samtools/kseq.h samtools/khash.h +Files: samtools/khash.h samtools/kseq.h Copyright: 2008-2011 by Attractive Chaos License: MIT @@ -23,15 +23,69 @@ Files: samtools/bcftools/bcf.h Copyright: 2010 Broad Institute License: MIT -Files: samtools/bgzf.c.pysam.c samtools/bgzf.h tabix/bgzf.c.pysam.c tabix/bgzf.h +Files: samtools/bgzf.c.pysam.c samtools/bgzf.h tabix/bgzf.c.pysam.c tabix/bgzf.h samtools/knetfile.c.pysam.c Copyright: 2008 Broad Institute / Massachusetts Institute of Technology - 2011,2012 Attractive Chaos + 2010-2012 Attractive Chaos License: MIT Files: tabix/bgzip.c.pysam.c Copyright: 2008 Broad Institute / Massachusetts Institute of Technology License: MIT +Files: samtools/kaln.c.pysam.c samtools/kaln.h samtools/kprobaln.h +Copyright: 2003-2006, 2008, 2009, by Heng Li +License: MIT + +Files: samtools/razf.c.pysam.c samtools/razf.h +Copyright: 2008 Jue Ruan , Heng Li +License: BSDlike1 + Redistribution and use in source and binary forms, with or without + modification, are permitted provided that the following conditions + are met: + 1. Redistributions of source code must retain the above copyright + notice, this list of conditions and the following disclaimer. + 2. Redistributions in binary form must reproduce the above copyright + notice, this list of conditions and the following disclaimer in the + documentation and/or other materials provided with the distribution. + . + THIS SOFTWARE IS PROVIDED BY THE AUTHOR AND CONTRIBUTORS ``AS IS'' AND + ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE + IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE + ARE DISCLAIMED. IN NO EVENT SHALL THE AUTHOR OR CONTRIBUTORS BE LIABLE + FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL + DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS + OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) + HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT + LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY + OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF + SUCH DAMAGE. + +Files: samtools/win32/zconf.h samtools/win32/zlib.h +Copyright: 1995-2005 Jean-loup Gailly and Mark Adler +License: BSDlike2 + This software is provided 'as-is', without any express or implied + warranty. In no event will the authors be held liable for any damages + arising from the use of this software. + . + Permission is granted to anyone to use this software for any purpose, + including commercial applications, and to alter it and redistribute it + freely, subject to the following restrictions: + . + 1. The origin of this software must not be misrepresented; you must not + claim that you wrote the original software. If you use this software + in a product, an acknowledgment in the product documentation would be + appreciated but is not required. + 2. Altered source versions must be plainly marked as such, and must not be + misrepresented as being the original software. + 3. This notice may not be removed or altered from any source distribution. +Comment: These files are not used and could be stripped from the source + +Files: samtools/win32/xcurses.h +Copyright: 2008 wmcbrine +License: PublicDomain + This file is in public domain. +Comment: These files are not used and could be stripped from the source + License: MIT Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal @@ -51,28 +105,3 @@ License: MIT OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE. - -===== -DRAFT -===== - -Files: samtools/kaln.c.pysam.c samtools/kaln.h samtools/kprobaln.h -Copyright: 2003-2006, 2008, 2009, by Heng Li - -samtools/khash.h: @copyright Heng Li - -Files: samtools/knetfile.c.pysam.c -Copyright: (c) 2008 Genome Research Ltd (GRL). - 2003-2006, 2008-2010, by Heng Li - -Files: samtools/razf.c.pysam.c samtools/razf.h -Copyright: 2008, Jue Ruan , Heng Li - -samtools/sam.h: @copyright Genome Research Ltd. - -samtools/win32/zconf.h: * Copyright (C) 1995-2005 Jean-loup Gailly. -samtools/win32/zconf.h: * For conditions of distribution and use, see copyright notice in zlib.h -samtools/win32/zconf.h:# pragma map(inflate_copyright,"INCOPY") -samtools/win32/zlib.h: Copyright (C) 1995-2005 Jean-loup Gailly and Mark Adler - -tabix/khash.h: @copyright Heng Li