From: Michael R. Crusoe <michael.crusoe@gmail.com>
Date: Thu, 23 Jan 2020 13:31:06 +0000 (+0100)
Subject: Try to keep example_no_seq_in_header_null_bytes.bam from being deleted
X-Git-Tag: archive/raspbian/0.22.0+ds-1+rpi1~1^2^2~63
X-Git-Url: https://dgit.raspbian.org/?a=commitdiff_plain;h=892d2244d590e3d0c1d98e9cbe46b038cb068601;p=python-pysam.git

Try to keep example_no_seq_in_header_null_bytes.bam from being deleted
---

diff --git a/debian/changelog b/debian/changelog
index fc75265..ce2b514 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -3,6 +3,7 @@ python-pysam (0.15.4+ds-1) UNRELEASED; urgency=medium
   * Team upload.
   * New upstream version
   * python-pysam-tests: Multi-Arch: foreign
+  * Try to keep example_no_seq_in_header_null_bytes.bam from being deleted
 
  -- Michael R. Crusoe <michael.crusoe@gmail.com>  Thu, 23 Jan 2020 13:46:15 +0100
 
diff --git a/debian/patches/clean_less b/debian/patches/clean_less
new file mode 100644
index 0000000..2c44e8e
--- /dev/null
+++ b/debian/patches/clean_less
@@ -0,0 +1,11 @@
+--- python-pysam.orig/tests/pysam_data/Makefile
++++ python-pysam/tests/pysam_data/Makefile
+@@ -87,7 +87,7 @@
+ 	cp ex1.cram $@
+ 
+ clean:
+-	rm -fr *.bam *.bai *.fai *.pileup* *.cram \
++	rm -fr *.bai *.fai *.pileup* *.cram \
+ 	*~ calDepth *.dSYM pysam_*.sam \
+ 	ex2.sam ex2.sam.gz ex1.sam \
+ 	with_md.sam.gz \
diff --git a/debian/patches/series b/debian/patches/series
index 0b9a088..ed8ac5a 100644
--- a/debian/patches/series
+++ b/debian/patches/series
@@ -4,3 +4,4 @@ hts1.10
 samtools_v1.10_full
 # samtools_v1.10
 bcftools_v1.10_full
+clean_less