new upstream release 2.7.1

diff --git a/debian/changelog b/debian/changelog
index c9e3a36852ac99c04d00877f62ab72133dbdf200..471e56ed4d80a6a244a2321234233062af362a99 100644 (file)
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,15 +1,10 @@
-ncbi-blast+ (2.7.1-1) UNRELEASED; urgency=medium
+ncbi-blast+ (2.7.1-1) unstable; urgency=medium
 
   * New upstream release
     d/patches: update patch for new release
     d/control:
       go to standards 4.1.3
       add mbedtls dependency
-    
-
-    [TODO]
-    new embedded library mbedtls in c++/src/connect/
-    some unit tests are failing due to symbols not found
 
  -- Olivier Sallou <osallou@debian.org>  Sat, 10 Feb 2018 17:35:31 +0000
 

diff --git a/debian/patches/fix_unit_tests b/debian/patches/fix_unit_tests
new file mode 100644 (file)
index 0000000..710165e
--- /dev/null
+++ b/debian/patches/fix_unit_tests
@@ -0,0 +1,14 @@
+Subject: add missing lib for tests
+Description: unit_test need blast lib to compile
+Forwarded: Not-Needed 
+Author: Olivier Sallou <osallou@debian.org>
+Last-Updated: 2018-02-11
+--- a/c++/src/algo/blast/Makefile.blast_macros.mk
++++ b/c++/src/algo/blast/Makefile.blast_macros.mk
+@@ -21,5 +21,5 @@
+ BLAST_LDEP = xalgoblastdbindex composition_adjustment \
+               xalgodustmask xalgowinmask seqmasks_io seqdb blast_services xalnmgr \
+               xobjutil $(OBJREAD_LIBS) xnetblastcli xnetblast blastdb scoremat tables
+-BLAST_LIBS = proteinkmer xblast $(BLAST_LDEP)
++BLAST_LIBS = proteinkmer xblast blast $(BLAST_LDEP)
+ # BLAST additionally needs xconnect $(SOBJMGR_LIBS) or $(OBJMGR_LIBS)

diff --git a/debian/patches/series b/debian/patches/series
index d7a59a69884d770d7976645326c9cb502a8ea1fe..5d8459620e395b8cfa47c1b8bf25a1fef773da45 100644 (file)
--- a/debian/patches/series
+++ b/debian/patches/series
@@ -11,3 +11,4 @@ fix_configure
 support_x32
 suppress_gnutls_version_check
 optionally_keep_sequence
+fix_unit_tests

diff --git a/debian/rules b/debian/rules
index 65e6748ed652526786477635d04a33a8574f813c..22a1758208f12fa8f16121191f9269c9db2f67ec 100755 (executable)
--- a/debian/rules
+++ b/debian/rules
@@ -125,5 +125,5 @@ override_dh_gencontrol-indep:
        dh_gencontrol -Nblast2
 
 %:
-       dh $@ -Dc++ --with autotools_dev
-       #dh $@ -Dc++
+       #dh $@ -Dc++ --with autotools_dev
+       dh $@ -Dc++