- Directly #include headers as needed.
- Use modern syntax for making protected base members public.
- Add forward declarations as needed.
+ * Wrap and sort build dependencies to ease maintenance thereof.
[ Andreas Tille ]
* debian/control: Modernize Vcs-* fields.
- -- Aaron M. Ucko <ucko@debian.org> Thu, 10 May 2012 20:37:32 -0400
+ -- Aaron M. Ucko <ucko@debian.org> Thu, 10 May 2012 23:29:17 -0400
ncbi-blast+ (2.2.26-2) unstable; urgency=low
Source: ncbi-blast+
Section: science
Priority: optional
-Build-Depends: debhelper (>= 7.0.50~), autotools-dev (>= 20100122), libbz2-dev, libpcre3-dev, zlib1g-dev, libboost-test-dev, quilt (>= 0.46-7~), time, libc0.3-dev (>= 2.13-9~) [hurd-i386]
+Build-Depends: autotools-dev (>= 20100122),
+ debhelper (>= 7.0.50~),
+ libboost-test-dev,
+ libbz2-dev,
+ libc0.3-dev (>= 2.13-9~) [hurd-i386],
+ libpcre3-dev,
+ quilt (>= 0.46-7~),
+ time,
+ zlib1g-dev
Standards-Version: 3.9.3
-Uploaders: Olivier Sallou <osallou@debian.org>,
- Andreas Tille <tille@debian.org>
+Uploaders: Olivier Sallou <osallou@debian.org>, Andreas Tille <tille@debian.org>
DM-Upload-Allowed: yes
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Homepage: http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/
Package: ncbi-blast+
Architecture: any
Enhances: t-coffee
-Depends: ${shlibs:Depends}, ${misc:Depends}, ${perl:Depends}, python, ncbi-data
+Depends: ncbi-data, python, ${misc:Depends}, ${perl:Depends}, ${shlibs:Depends}
Multi-Arch: foreign
Description: next generation suite of BLAST sequence search tools
The Basic Local Alignment Search Tool (BLAST) is the most widely
- used sequence similarity tool. There are versions of BLAST that
- compare protein queries to protein databases, nucleotide queries
- to nucleotide databases, as well as versions that translate nucleotide
- queries or databases in all six frames and compare to protein databases
+ used sequence similarity tool. There are versions of BLAST that
+ compare protein queries to protein databases, nucleotide queries
+ to nucleotide databases, as well as versions that translate nucleotide
+ queries or databases in all six frames and compare to protein databases
or queries.
- PSI-BLAST produces a position-specific-scoring-matrix (PSSM) starting
+ PSI-BLAST produces a position-specific-scoring-matrix (PSSM) starting
with a protein query, and then uses that PSSM to perform further searches.
- It is also possible to compare a protein or nucleotide query to a
+ It is also possible to compare a protein or nucleotide query to a
database of PSSM’s.
The NCBI supports a BLAST web page at blast.ncbi.nlm.nih.gov as well as
a network service.