+ d/patches/run_perl_directly for update_blastdb(.pl)'s #! line.

diff --git a/debian/changelog b/debian/changelog
index 7cd98933f511208898d0f665568be9a3f0fe33fa..55840d447e3ed5934f5f6b5b8456f043417feb75 100644 (file)
--- a/debian/changelog
+++ b/debian/changelog
@@ -5,13 +5,14 @@ ncbi-blast+ (2.10.0-1) UNRELEASED; urgency=medium
     - Formally refresh.  (A few files needed straightforward manual
       intervention.)
     - support_gcc10: New, for formal support of GCC 10+.  (Closes: #957581.)
+    - run_perl_directly: New, to streamline update_blastdb(.pl)'s #! line.
   * debian/rules:
     - override_dh_clean: Clean up new generated artifacts: fakehome/ and
       c++/include/common/ncbi_revision.h.
     - override_dh_install-arch: Install new cleanup-blastdb-volumes script
       without its upstream .py suffix.
 
- -- Aaron M. Ucko <ucko@debian.org>  Sun, 26 Apr 2020 18:00:53 -0400
+ -- Aaron M. Ucko <ucko@debian.org>  Sun, 26 Apr 2020 18:02:47 -0400
 
 ncbi-blast+ (2.9.0-4) unstable; urgency=high
 

diff --git a/debian/patches/run_perl_directly b/debian/patches/run_perl_directly
new file mode 100644 (file)
index 0000000..0bf7489
--- /dev/null
+++ b/debian/patches/run_perl_directly
@@ -0,0 +1,12 @@
+Author: Aaron M. Ucko <ucko@debian.org>
+Date:   Sun Apr 26 11:28:03 2020 -0400
+Description: Bypass env in Perl script shebangs.
+
+--- a/c++/src/app/blast/update_blastdb.pl
++++ b/c++/src/app/blast/update_blastdb.pl
+@@ -1,4 +1,4 @@
+-#!/usr/bin/env perl
++#!/usr/bin/perl
+ # $Id: update_blastdb.pl 597648 2019-11-25 18:31:12Z ivanov $
+ # ===========================================================================
+ #

diff --git a/debian/patches/series b/debian/patches/series
index 164b5028b2b4b2f69104565d6ad19070fedb5aac..419fdd9f893c8dd5c0376477c797e2efd9db8ed1 100644 (file)
--- a/debian/patches/series
+++ b/debian/patches/series
@@ -14,3 +14,4 @@ system_mbedtls_only
 reprobuild
 spelling
 support_gcc10
+run_perl_directly