all direct dependencies. (Break the dependency loop between libxblast
and libxalgoblastdbindex by having the former provide only the C++ BLAST
API, leaving the C core only in libblast.) (Closes: #633567.)
+ * debian/rules: tweak LDFLAGS, supplying -Wl,--as-needed across the
+ board (as it is now safe to do so) and adding -Wl,--enable-new-dtags
+ to allow LD_LIBRARY_PATH to override the private rpath.
[ Andreas Tille ]
* Enhances: t-coffee (as stated in tasks file)
- -- Aaron M. Ucko <ucko@debian.org> Sun, 28 Aug 2011 18:29:39 -0400
+ -- Aaron M. Ucko <ucko@debian.org> Sun, 28 Aug 2011 18:33:01 -0400
ncbi-blast+ (2.2.25-3) unstable; urgency=low
DEB_CONFIGURE_EXTRA_FLAGS=--with-dll --with-mt --without-autodep \
--without-makefile-auto-update --with-flat-makefile --without-caution \
--without-dbapi --without-lzo --with-runpath=/usr/lib/ncbi-blast+ \
- --with-build-root=BUILD
+ --with-build-root=BUILD LDFLAGS='-Wl,--as-needed -Wl,--enable-new-dtags'
proj=algo/blast/ app/ objmgr/ objtools/align_format/ objtools/blast/
# XXX - not quite right, as we get -DNDEBUG vs. -D_DEBUG
CONFIG_SHELL=/bin/bash ./configure $(DEB_CONFIGURE_EXTRA_FLAGS)
override_dh_auto_build:
- cd c++/BUILD/build && make -f Makefile.flat \
- all_projects="$(proj)" DLL_LDFLAGS=-Wl,--as-needed
+ cd c++/BUILD/build && make -f Makefile.flat all_projects="$(proj)"
override_dh_auto_test:
-dh_auto_test