Duplicated code was verified. It seems to be quite hard to link against Debian packa...

diff --git a/debian/DRAFT b/debian/DRAFT
deleted file mode 100644 (file)
index 663482e..0000000
--- a/debian/DRAFT
+++ /dev/null
@@ -1,5 +0,0 @@
-This is a draft package. Everybody is welcome to polish and upload it.
-
-Current issues:
-
- * Uses local copies of samtools and tabix.

diff --git a/debian/copyright b/debian/copyright
index 93c7aecfea8a2056f5e2aa09347cdafa7fe2ee5b..9359c6d725a8b652ca8fd4401f3e5d0353e53dc5 100644 (file)
--- a/debian/copyright
+++ b/debian/copyright
@@ -1,9 +1,35 @@
 Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
 Upstream-Name: pysam
+Upstream-Contact: Heng Li <lh3@sanger.ac.uk>
 Source: http://pysam.googlecode.com/files/pysam-0.7.tar.gz
 
 Files: *
-Copyright: © 2008-2009 Genome Research Ltd.
+Copyright: 2008-2010 Genome Research Ltd.
+License: MIT
+
+Files: samtools/khash.h samtools/kseq.h samtools/khash.h 
+Copyright: 2008-2011 by Attractive Chaos <attractor@live.co.uk>
+License: MIT
+
+Files: samtools/kprobaln.c.pysam.c
+Copyright: 2003-2006, 2008-2010, by Heng Li <lh3lh3@live.co.uk>
+License: MIT
+
+Files: tabix/tabix.h
+Copyright: 2009 Genome Research Ltd (GRL), 2010 Broad Institute
+License: MIT
+
+Files: samtools/bcftools/bcf.h
+Copyright: 2010 Broad Institute
+License: MIT
+
+Files: samtools/bgzf.c.pysam.c samtools/bgzf.h tabix/bgzf.c.pysam.c tabix/bgzf.h
+Copyright: 2008 Broad Institute / Massachusetts Institute of Technology
+           2011,2012 Attractive Chaos <attractor@live.co.uk>
+License: MIT
+
+Files: tabix/bgzip.c.pysam.c
+Copyright: 2008 Broad Institute / Massachusetts Institute of Technology
 License: MIT
 
 License: MIT
@@ -30,19 +56,6 @@ License: MIT
 DRAFT
 =====
 
-The copyright of samtools and tabix must be documented as well !
-
-Files: samtools/bam.h samtools/faidx.h samtools/khash.h samtools/kseq.h samtools/ksort.h tabix/khash.h tabix/knetfile.c.pysam.c tabix/ksort.h tabix/tabix.h
-Copyright: 2008-2010 Genome Research Ltd (GRL).
-
-Files: samtools/bcftools/bcf.h
-Copyright: (c) 2010 Broad Institute
-
-Files: samtools/bgzf.c.pysam.c samtools/bgzf.h tabix/bgzf.c.pysam.c tabix/bgzf.h tabix/bgzip.c.pysam.c
-Copyright: 2008 Broad Institute / Massachusetts Institute of Technology
-
-samtools/faidx.h:  @copyright The Wellcome Trust Sanger Institute.
-
 Files: samtools/kaln.c.pysam.c samtools/kaln.h samtools/kprobaln.h
 Copyright: 2003-2006, 2008, 2009, by Heng Li <lh3lh3@gmail.com>