--- /dev/null
--- /dev/null
++Macaulay2 for Debian
++====================
++
++Javascript libraries
++--------------------
++Macaulay2 uses a number of Javascript libraries. In particular, they
++are used to render mathematical expressions in the browser-based
++documentation and to visualize various mathematical objects by the
++Visualize package.
++
++Upstream embeds these libraries in the source code, often minimized.
++This is not desirable for the Debian package. Therefore, we repack
++the tarball (using Files-Excluded in debian/copyright) without the
++embedded copies and use dh_linktree to create symbolic links to the
++Debian versions.
++
++dwww
++----
++The Macaulay2 documentation is registered with doc-base. In order to
++view the html documentation properly in your web browser using dwww,
++you must append "/usr/share/Macaulay2" to DWWW_DOCPATH in
++/etc/dwww/dwww.conf. Otherwise, some resources (e.g., CSS and
++Javascript files) will be unavailable.
++
++Suggested packages
++------------------
++Quite a few additional Debian packages will be installed alongside
++Macaulay2 automatically due to being listed in "Depends" or
++"Recommended", but there are a number of others that are listed under
++"Suggests" that will not be installed unless you pass
++"--install-suggests" to apt or install them separately. They are:
++
++* bergman - Used by NCAlgebra package.
++
++* dot2tex - Used by showTikZ function in Graphs package.
++
++* fig2dev - Used by gfanRender and gfanRenderStaircase functions in
++ gfanInterface package.
++
++* graphviz - Used by displayGraph function in Graphs package.
++
++* pdf-viewer (virtual package) - Used by displayPoset function in
++ Posets package. The default pdf viewer is called using xdg-open;
++ use xdg-mime to change it.
++
++* phcpack - Used by MonodromySolver, NumericalSchubertCalculus, and
++ PHCpack packages.
++
++* polymake - Used by Polymake, StatePolytope, and Tropical packages.
++
++* qepcad - Used by CoincidentRootLoci package.
++
++* sdpa - Used by SemidefiniteProgramming package.
++
++Third-party programs not available in Debian
++--------------------------------------------
++Some third-party programs used by Macaulay2 do not have a free license
++and therefore are unable to be packaged in Debian.
++
++* alphaCertified - Used by NumericalCertification package.
++ See https://www.math.tamu.edu/~sottile/research/stories/alphaCertified/.
++
++* Bertini - Used by Bertini,
++ See https://bertini.nd.edu/.
++
++ -- Doug Torrance <dtorrance@debian.org>, Mon, 24 Oct 2022 18:30:15 -0400
--- /dev/null
--- /dev/null
++macaulay2 (1.21+ds-3) unstable; urgency=medium
++
++ * debian/control
++ - Bump Standards-Version to 4.6.2.
++ * debian/macaulay2-common.linktrees
++ - Go back to providing paths to specific KaTeX files in "contrib"
++ folder; the documentation is expecting ".min.js", but the Debian
++ package has only ".js".
++ * debian/patches/skip-failing-package-tests.patch
++ - Skip Topcom and Triangulations tests that are mysteriously failing
++ during Ubuntu autopkgtests.
++
++ -- Doug Torrance <dtorrance@debian.org> Sat, 31 Dec 2022 10:43:00 -0500
++
++macaulay2 (1.21+ds-2) unstable; urgency=medium
++
++ * debian/copyright
++ - Add license info for GMP <-> Python integer conversion routines from
++ gmpy2 used by Python package.
++ - Add license info for JSON parsing tests.
++ * debian/patches/topcom-memopt.patch
++ - New patch; use --memopt option when calling TOPCOM to save memory and
++ avoid example/test failures.
++ * debian/rules
++ - Update comment about cached examples.
++ - Add -latomics to LIBS on armel to fix TBB linking issue.
++ * debian/tests/control
++ - Add libmpfi-dev to Depends for package tests; it is needed for a
++ ForeignFunctions test.
++
++ -- Doug Torrance <dtorrance@debian.org> Fri, 16 Dec 2022 06:07:27 -0500
++
++macaulay2 (1.21+ds-1) unstable; urgency=medium
++
++ * New upstream release.
++ * debian/control
++ - Add libffi-dev to Build-Depends; needed for new ForeignFunctions
++ package.
++ * debian/copyright
++ - Add license information for new packages.
++ * debian/macaulay2-common.lintian-overrides
++ - Update package-contains-documentation-outside-usr-share-doc paths.
++ * debian/patches/customize-argument-mode.patch
++ - Remove patch; applied upstream.
++ * debian/patches/libatomic.patch
++ - Remove patch; issue fixed in tbb package.
++ * debian/patches/skip-failing-core-tests.patch
++ - Remove timing-quotient patch; applied upstream.
++ * debian/patches/skip-failing-package-tests.patch
++ - Restore Topcom tests; they were only failing occassionally and we'd
++ like to make sure they run with the most recent version of TOPCOM.
++ - Remove VersalDeformations patch; this test was commented out
++ upstream.
++ - Skip some AssociativeAlgebras and MinimalPrimes tests that have been
++ failing.
++
++ -- Doug Torrance <dtorrance@debian.org> Wed, 14 Dec 2022 19:54:09 -0500
++
++macaulay2 (1.20+ds-9) unstable; urgency=medium
++
++ * debian/patches/skip-failing-package-tests.patch
++ - Skip RandomGenus14Curves tests on armel; they were running out of
++ memory during CI tests.
++
++ -- Doug Torrance <dtorrance@debian.org> Sun, 30 Oct 2022 09:40:50 -0400
++
++macaulay2 (1.20+ds-8) unstable; urgency=medium
++
++ * debian/control
++ - Add bergman to Suggests. It was recently uploaded to Debian and is
++ used by the NCAlgebra package.
++ * debian/macaulay2-common.linktrees
++ - Create symlink to katex/contrib directory instead of specific
++ files within the directory since copy-tex.css was removed in
++ KaTeX 0.16.0 (Closes: #1022732).
++ * debian/macaulay2-common.lintian-overrides
++ - Add square brackets around filenames to match new lintian output.
++ * debian/README.Debian
++ - Begin documenting non-free 3rd-party programs.
++ - Mention bergman in "Suggested packages" section.
++ * debian/rules
++ - Build without link-time optimization (Closes: #1015537).
++ * debian/scripts/m2-get-orig-source.sh
++ - Exit when there's an error regenerating examples.
++ * debian/source/lintian-overrides
++ - Add square brackets around filenames to match new lintian output.
++ - Add source-is-missing override for WeylGroups package tutorial; false
++ positive.
++
++ -- Doug Torrance <dtorrance@debian.org> Tue, 25 Oct 2022 08:04:19 -0400
++
++macaulay2 (1.20+ds-7) unstable; urgency=medium
++
++ * debian/patches/skip-failing-core-tests.patch
++ - Update upper bound for timing-quotient test to avoid failures in
++ Ubuntu amd64 autopkgtests. Thanks to Graham Inggs for the patch.
++
++ -- Doug Torrance <dtorrance@debian.org> Tue, 28 Jun 2022 17:13:20 -0400
++
++macaulay2 (1.20+ds-6) unstable; urgency=medium
++
++ * debian/patches/libatomic.patch
++ - Fix patch; we need to include -latomic in LIBS before we try to link
++ against TBB.
++
++ -- Doug Torrance <dtorrance@debian.org> Tue, 14 Jun 2022 10:41:24 -0400
++
++macaulay2 (1.20+ds-5) unstable; urgency=medium
++
++ * debian/patches/libatomic.patch
++ - Link against libatomic for TBB check to prevent FTBFS on armel.
++
++ -- Doug Torrance <dtorrance@debian.org> Tue, 14 Jun 2022 09:55:58 -0400
++
++macaulay2 (1.20+ds-4) unstable; urgency=medium
++
++ * debian/control
++ - Add node-import-local, node-interpret, and node-rechoir to
++ Build-Depends-Indep; needed for webpack 5 to build highlight.js for
++ syntax highlighting in the HTML documentation.
++ * debian/rules
++ - Re-enable syntax highlighting in the HTML documentation; the webpack
++ bug that was causing build failures has been fixed.
++
++ -- Doug Torrance <dtorrance@debian.org> Sat, 21 May 2022 07:09:31 -0400
++
++macaulay2 (1.20+ds-3) unstable; urgency=medium
++
++ * debian/rules
++ - Temporarily disable syntax highlighting in the HTML documentation.
++ Otherwise, a webpack bug will cause the build to fail.
++
++ -- Doug Torrance <dtorrance@debian.org> Mon, 16 May 2022 22:26:51 -0400
++
++macaulay2 (1.20+ds-2) unstable; urgency=medium
++
++ * debian/control
++ - Bring w3c-markup-validator back to Build-Depends-Indep.
++ * debian/patches/highlightjs.patch
++ - Fix typo in Description; the backport was for highlight.js 9, not
++ webpack 9.
++ * debian/patches/skip-failing-package-tests.patch
++ - Skip check(13, "SpecialFanoFourfolds") on s390x.
++ * debian/rules
++ - Restore validate-html check now that the libxml bug that was causing
++ it to fail has been fixed.
++
++ -- Doug Torrance <dtorrance@debian.org> Mon, 16 May 2022 14:20:47 -0400
++
++macaulay2 (1.20+ds-1) unstable; urgency=medium
++
++ * New upstream release.
++ * debian/control
++ - Add libboost-math-dev to Build-Depends; needed for several new
++ numerical functions.
++ - Add versioned dependency for libmathicgb-dev; need a newer version
++ to enable TBB support.
++ - Add libjs-bootsidemenu and libjs-nouislider to Build-Depends-Indep;
++ these replace formerly embedded JavaScript libraries.
++ - Add a versioned dependency for libjs-katex to ensure it has the
++ render-a11y-string extension.
++ - Add several dependencies for syntax highlighting in the HTML
++ documentation (node-css-loader, node-highlight.js, node-style-loader,
++ pkg-js-tools, and webpack) to Build-Depends-Indep.
++ - Bump Standards-Version to 4.6.1.
++ * debian/copyright
++ - Simplify KaTeX files in Files-Excluded; we now exclude the entire
++ directory instead of various specific files.
++ - Add BootSideMenu and noUiSlider embedded JavaScript libraries to
++ Files-Excluded since we now use their Debian packages.
++ - Bump my copyright years.
++ - Remove license information for formerly embedded JavaScript
++ libraries.
++ - Add license information for new packages that appeared in this
++ release.
++ * debian/macaulay2-common.linktrees
++ - Add symbolic links to BootSideMenu, noUiSlider, and the KaTeX
++ extension render-a11y-string.
++ * debian/macaulay2-common.lintian-overrides
++ - Add package-contains-documentation-outside-usr-share-doc overrides
++ for MergeTeX and SimplicialComplexes packages.
++ * debian/missing-sources
++ - Remove directory and its contents; no longer needed.
++ * debian/nodejs/extlinks
++ - New file; create symlinks during build to node modules needed for
++ enabling syntax highlighting in the HTML documentation.
++ * debian/patches
++ - Remove patches that have been applied or otherwise dealt with
++ upstream.
++ + givaro-bool-constant.patch
++ + tbb-2021.patch
++ + use-shared-mathicgb-and-friends.patch
++ * debian/patches/customize-argument-mode.patch
++ - New patch; enable adjusting command line arguments during package
++ tests.
++ * debian/patches/highlightjs.patch
++ - New patch; backport building of higlight.js for syntax highlighting
++ in HTML documentation to webpack 9, which is the version still in
++ Debian.
++ * debian/patches/skip-failing-{core,package}-tests.patch
++ - Stop skipping a number of tests that have either been fixed
++ upstream, fail very rarely, or should no longer be an issue
++ now that we are no longer setting ulimits.
++ * debian/patches/skip-failing-engine-tests.patch
++ - Skip an engine test that has been known to fail frequently.
++ * debian/README.Debian
++ - Drop section about embedded JavaScript libraries as there are no
++ longer any.
++ * debian/rules
++ - Use a number of new options to "configure" script.
++ + Specify that we are using the Debian packages for memtailor,
++ mathic, mathicgb, and gc.
++ + Disable building documentation when appropriate.
++ + Enable syntax highlighting in the HTML documentation when
++ appropriate.
++ - Use pkg-js-tools to create symlinks to the node modules needed
++ for enabling syntax highlighting.
++ - Instead of creating dummy copies of various KaTeX files before
++ the symlinks are created by dh_linktree, just create an empty dummy
++ directory.
++ - Don't set ulimits during tests. These were a frequent cause of build
++ errors on slow build machines.
++ * debian/scripts/Debian.m2
++ - Cache SemidefiniteProgramming::Solver example; it had reproducility
++ problems.
++ * debian/source/lintian-overrides
++ - Add package-does-not-install-examples override for OnlineLookup
++ cached examples.
++ * debian/tests/control
++ - Skip package tests on armhf instead of marking them as flaky on all
++ architectures.
++
++ -- Doug Torrance <dtorrance@debian.org> Sun, 15 May 2022 07:04:54 -0400
++
++macaulay2 (1.19.1+ds-9) unstable; urgency=medium
++
++ * debian/tests/control
++ - Mark package-tests as flaky since it regularly times out on armhf
++ (Closes: #1010453).
++
++ -- Doug Torrance <dtorrance@debian.org> Sun, 01 May 2022 20:14:15 -0400
++
++macaulay2 (1.19.1+ds-8) unstable; urgency=medium
++
++ * debian/tests/control
++ - Add 4ti2, gfan, and normaliz to Depends for core-tests
++ (Closes: #1010172).
++
++ -- Doug Torrance <dtorrance@debian.org> Mon, 25 Apr 2022 14:14:15 -0400
++
++macaulay2 (1.19.1+ds-7) unstable; urgency=medium
++
++ * debian/gbp.conf
++ - Switch to "debian/latest" for Debian branch; recommended by DEP-14.
++ * debian/macaulay2-common.links
++ - New file; use dh_link to create symlinks to GPL text for docs.
++ * debian/macaulay2-common.linktree
++ - Stop using dh_linktree for creating symlinks to GPL text for docs;
++ was creating unnecessary versioned dependency on base-files
++ (Closes: #1009838).
++ * debian/patches/skip-failing-package-tests.patch
++ - Skip new failing package tests:
++ + check(4, "ThreadedGB"); failing on ppc64el.
++ + check({25, 31}, "AssociativeAlgebras"); failing on ppc64el
++ (Closes: #1010096).
++ * debian/scripts/m2-get-orig-source.sh
++ - Run missingPackages() when --merge option is given to see if any new
++ packages should be added to d/copyright.
++ * debian/tests/control
++ - Split each "M2 --check n" into its own separate test.
++ - Use "macaulay2" instead of "@" in Depends since we don't need
++ elpa-macaulay2.
++ - Add test names.
++
++ -- Doug Torrance <dtorrance@debian.org> Sun, 24 Apr 2022 21:05:14 -0400
++
++macaulay2 (1.19.1+ds-6) unstable; urgency=medium
++
++ * debian/control
++ - Exclude python3-dev from Build-Depends with nopython build profile.
++ * debian/macaulay2-common.install
++ - Install make-M2-symbols.m2; generates files for syntax highlighting
++ in Emacs, Pygments, etc.
++ * debian/patches/skip-failing-package-tests.patch
++ - Properly skip tests marked "no-check-architecture".
++ * debian/patches/tbb-2021.patch
++ - New patch; add support for TBB 2021.
++ * debian/patches/use-dh-elpa.patch
++ - Fix path to M2-emacs-help.txt in documentation.
++ * debian/rules
++ - Don't build with Python support with "nopython" build profile.
++
++ -- Doug Torrance <dtorrance@debian.org> Fri, 11 Feb 2022 11:25:09 -0500
++
++macaulay2 (1.19.1+ds-5) unstable; urgency=medium
++
++ * debian/control
++ - Remove w3c-markup-validator from Build-Depends-Indep; it is only used
++ for validating the html documentation, which we are currently
++ skipping.
++ - Add phcpack to Suggests.
++ * debian/README.Debian
++ - Add blurb about phcpack to "Suggested packages" section.
++
++ -- Doug Torrance <dtorrance@debian.org> Thu, 27 Jan 2022 11:42:39 -0500
++
++macaulay2 (1.19.1+ds-4) unstable; urgency=medium
++
++ * debian/patches/givaro-bool-constant.patch
++ - New patch; fix "'givaro_bool_constant' does not name a type" error
++ when building with givaro 4.2.0 and fflas-ffpack 2.5.0, which are
++ now in Debian.
++ * debian/rules
++ - Make dump directories inside the dump file targets instead of their
++ own; fixes strange "unlink" message that was appearing in the build
++ logs.
++ * debian/scripts/m2-get-orig-source.sh
++ - Make the repack suffix a variable.
++
++ -- Doug Torrance <dtorrance@debian.org> Sun, 19 Dec 2021 07:29:32 -0500
++
++macaulay2 (1.19.1+ds-3) unstable; urgency=medium
++
++ * debian/control
++ - Add versioned dependency on libsingular4-dev; configure script will
++ fail if < 4.2.0 is found. For this reason, we can't depend on
++ the virtual package libsingular-dev any more.
++ - Add gdbmtool and faketime to Build-Depends-Indep; needed for
++ generating reproducible dumps of the documentation database files.
++ - Add gdbmtool to Depends for macaulay2; needed for new postinst
++ script.
++ * debian/macaulay2.install
++ - Stop installing files in /usr/lib; no longer necessary now that we
++ will generate package documentation databases during postinst.
++ * debian/macaulay2.postinst
++ - New file; load package documentation databases from dump files after
++ installation.
++ * debian/macaulay2.prerem
++ - New file; remove directories containing package documentation
++ databases that were created during postinst.
++ * debian/patches/allow-older-factory.patch
++ - Remove patch; no longer necessary as singular 4.2.1 is now in Debian.
++ * debian/patches/skip-failing-core-tests.patch
++ - Fix ComputationsBook::varieties test instead of skipping it.
++ * debian/rules
++ - Append -indep to execute_before_dh_auto_build target; we only need
++ the dummy KaTeX files and cached examples when building the
++ documentation.
++ - New override_dh_auto_build target; only build documentation when
++ building macaulay2-common.
++ - Append -indep to execute_after_dh_auto_install target; the cached
++ example directories will only exist and need to be removed when
++ building the documentation.
++ - Also in execute_after_dh_auto_install, create dumps of package
++ documentation to ship with macaulay2-common and then load during
++ postinst and then remove the database files.
++ - Remove execute_after_dh_install-arch target; empty directory is now
++ removed with the package documentation database after they're dumped.
++ - Exclude database dump files from dh_compress.
++ - Add override_dh_installdeb target to substitute variables in new
++ maintainer scripts.
++ * debian/salsa-ci.yml
++ - Stop allowing reprotest to fail; the parts of the package that are
++ built on Salsa are now reproducible.
++ - Allow autopkgtest to fail; the new test requires the documentation to
++ be built, which doesn't happen on Salsa.
++ * debian/scripts/Debian.m2
++ - Stop caching almost all examples; since we won't be building them on
++ non-amd64 architectures, we should see far fewer failures.
++ - Add new "skipTestArch" function to skip tests only on a particular
++ architecture.
++ * debian/scripts/m2-get-orig-source.sh
++ - Update string to grep for when "quilt push" fails.
++ * debian/tests/check-doc-db.m2
++ - New CI test for autopkgtest; test that the documentation database can
++ be loaded.
++ * debian/upstream/metadata
++ - Add "---" to signal document start.
++
++ -- Doug Torrance <dtorrance@debian.org> Tue, 14 Dec 2021 21:24:21 -0500
++
++macaulay2 (1.19.1+ds-2) unstable; urgency=medium
++
++ * debian/*
++ - Update my email address; now a Debian Developer.
++ * debian/patches/skip-failing-package-tests.patch
++ - Skip check(3, "K3Surfaces"); failing on s390x.
++ * debian/rules
++ - Stop setting IgnoreExampleErrors to true on certain architectures;
++ most example issues seem to have been cleared up.
++ * debian/scripts/Debian.m2
++ - Cache new failing examples; all failing on s390x:
++ + K3Surfaces::K3(String)
++ + K3Surfaces::LatticePolarizedK3surface Sequence
++ + K3Surfaces::project
++ + SpecialFanoFourfolds::CongruenceOfCurves EmbeddedProjectiveVariety
++ + SpecialFanoFourfolds::map(CongruenceOfCurves)
++ + QuaternaryQuartics::Half canonical degree 20
++
++ -- Doug Torrance <dtorrance@debian.org> Tue, 30 Nov 2021 12:49:29 -0500
++
++macaulay2 (1.19.1+ds-1) unstable; urgency=medium
++
++ * New upstream release.
++ * debian/patches/skip-failing-core-tests.patch
++ - Skip 000-core; it was renamed from core-tests, which we had been
++ previously skipping.
++ * debian/patches/skip-failing-package-tests.patch
++ - Skip new failing package tests:
++ + check(8, "K3Surfaces"); failing on i386 (Closes: #1000772).
++ + check(9, "SpecialFanoFourfolds"); failing on armhf.
++ - Update Bug metadata.
++ * debian/scripts/Debian.m2
++ - Cache Cremona::rationalMap(Ring,Tally); failing on s390x.
++
++ -- Doug Torrance <dtorrance@piedmont.edu> Mon, 29 Nov 2021 10:56:36 -0500
++
++macaulay2 (1.19+ds-3) unstable; urgency=medium
++
++ * debian/patches/skip-failing-package-tests.patch
++ - Skip new failing package tests:
++ + check(7, "K3Surfaces"); failing on i386.
++ + check(15, "MultiprojectiveVarieties"); failing on i386.
++ * debian/rules
++ - Ignore example errors on armhf.
++ * debian/scripts/Debian.m2
++ - Cache new failing examples:
++ + BettiCharacters::Example 3; failing on armhf.
++ + CharacteristicClasses::IndsOfSmooth; failing on s390x.
++ - Load Macaulay2Doc first in generateExamples to avoid "global symbols
++ inadvertently defined" error.
++
++ -- Doug Torrance <dtorrance@piedmont.edu> Wed, 24 Nov 2021 21:46:44 -0500
++
++macaulay2 (1.19+ds-2) unstable; urgency=medium
++
++ * debian/patches/skip-failing-core-tests.patch
++ - Skip new failing Core tests:
++ + methods; failing on mips64el (Closes: #1000348).
++ * debian/patches/skip-failing-package-tests
++ - Skip new failing package tests:
++ + check(6, "K3Surfaces"); failing on i386.
++ + check({4, 6, 7}, "SpecialFanoFourfolds"); failing on armhf.
++ + check(14, "SpecialFanoFourfolds"); sometimes segfaults.
++ * debian/rules
++ - Ignore example errors on armel, riscv64, and s390x.
++ * debian/scripts/Debian.m2
++ - Cache new failing examples:
++ + NoetherianOperators::gCorners; failing on armel.
++ + NormalToricVarieties::isNef(ToricDivisor); failing on riscv64.
++ + ReesAlgebra::PlaneCurveSingularties; failing on s390x
++ (Closes: #1000350).
++
++ -- Doug Torrance <dtorrance@piedmont.edu> Tue, 23 Nov 2021 06:12:52 -0500
++
++macaulay2 (1.19+ds-1) unstable; urgency=medium
++
++ * New upstream release.
++ * debian/control
++ - Update Maintainer to Debian Math Team.
++ - Add python3-dev to Build-Depends; needed for Python package.
++ - Update Vcs-* fields (science-team -> math-team).
++ - Add qepcad to Suggests; used by CoincidentRootLoci.
++ * debian/copyright
++ - Use leading spaces instead of tabs.
++ - Add license information for new packages and Pygments lexer.
++ - Update my copyright years for debian/*.
++ * debian/examples
++ - Update cached examples:
++ + MultiprojectiveVarieties::EmbeddedProjectiveVariety ===>
++ EmbeddedProjectiveVariety
++ + SpecialFanoFourfolds::detectCongruence(SpecialGushelMukaiFourfold,
++ ZZ)
++ * debian/patches
++ - Refresh for new release.
++ - Remove patches applied upstream:
++ + fix-visualize-firefox.patch
++ + hardening.patch
++ + reproducible-tvalues.patch
++ * debian/patches/allow-older-factory.patch
++ - New patch; upstream requires factory 4.2.0, which isn't in Debian
++ yet.
++ * debian/patches/git-description.patch
++ - Update for new release.
++ * debian/patches/skip-failing-core-tests.patch
++ - Skip ComputationsBook::solving; failing on ppc64.
++ - Actually skip CSM.test.
++ * debian/patches/skip-failing-package-tests.patch
++ - Skip new failing tests:
++ + check(5, "FunctionFieldDesingularization")
++ + check(11, "PrimaryDecomposition")
++ + check({12, 13, 15}, "SpecialFanoFourfolds")
++ + check(36, "TestIdeals")
++ - Stop skipping check(4, "NumericalImplicitization"); now commented
++ out upstream.
++ * debian/patches/use-cached-examples.patch
++ - Set UsedCachedExampleOutput for Tropical package so that cached
++ examples are used; Tropical::tropicalCycle was failing on ppc64el.
++ * debian/patches/use-shared-mathicgb-and-friends.patch
++ - Link against memtailor/mathic/mathicgb as shared libraries
++ again.
++ * debian/README.Debian
++ - Add qepcad to section on suggested packages.
++ * debian/rules
++ - Add --with-python option to configure.
++ * debian/scripts/Debian.m2
++ - Update code for generateExample to use new interface to
++ captureExampleOutput.
++ - Update generateExample so that it returns a boolean object (true
++ if an example was generated and false otherwise.)
++ - Update generateExamples so it returns the number of examples that
++ were generated.
++ - Deal with FastLinAlg -> FastMinors rename for cached
++ regularInCodimension example.
++ - Cache new failing examples:
++ + FourTiTwo::toricGraverDegrees; illegal instruction.
++ + Quasidegrees::exceptionalSet; sometimes segfaults.
++ + RandomMonomialIdeal::VariableName; failing on ppc64el.
++ + RationalMaps::inverseOfMap example; sometimes segfaults.
++ + SpecialFanoFourfolds::grassmannianHull; sometimes segfaults.
++ + SpecialFanoFourfolds::specialGushelMukaiFourfold(Array,Array,
++ String,Thing); sometimes segfaults.
++ - Add comment about Tropical::tropicalCycle.
++ * debian/scripts/m2-get-orig-source.sh
++ - Add -g option to commit version bump to git.
++ - Add -m option to merge branch.
++ - Add -R option to set remote.
++ * debian/source/lintian-overrides
++ - Add package-does-not-install-examples override for
++ MonomialIntegerPrograms and Python packages..
++ - Remove source-is-missing overrides; issues fixed upstream.
++ * debian/watch
++ - Update download URL (releases -> tags).
++
++ -- Doug Torrance <dtorrance@piedmont.edu> Wed, 17 Nov 2021 18:04:51 -0500
++
++macaulay2 (1.18+ds-5) unstable; urgency=medium
++
++ * debian/patches/reproducible-version.patch
++ - Rename from reproducible-config-args.patch.
++ - Use dummy compile node name and kernel release for
++ reproducibility.
++ * debian/patches/skip-failing-core-tests.patch
++ - Skip ComputationsBook::geometry; failing on ppc64.
++ - Skip CSM.test; failing on mipsel.
++ * debian/patches/skip-failing-package-tests.patch
++ - Skip check(1, "Binomials"); sometimes segfaults.
++ * debian/rules
++ - Use cp's verbose option when copying cached examples to the build
++ directory for improved debugging.
++ - Move removal of cached examples from build directory until after
++ dh_auto_install; otherwise we may try to install one of the affected
++ packages again if another example failed and IgnoreExampleErrors was
++ set to true. In this case, we may have gotten an error since
++ AuxiliaryFiles was true, but the auxiliary files had already been
++ removed.
++ * debian/scripts/Debian.m2
++ - Use package version from d/changelog for Version.
++ - Cache new failing examples:
++ + MultiprojectiveVarieties::∏; failing on mips64el.
++ + MultiprojectiveVarieties::segre(MultiprojectiveVariety); failing
++ on mips64el.
++
++ -- Doug Torrance <dtorrance@piedmont.edu> Thu, 30 Sep 2021 13:02:53 -0400
++
++macaulay2 (1.18+ds-4) unstable; urgency=medium
++
++ * debian/patches/skip-failing-core-tests.patch
++ - Skip isSubset test again; failing on mips64el.
++ * debian/patches/skip-failing-package-tests.patch
++ - Skip check(2, "MultiprojectiveVarieties"); failing on mipsel.
++ * debian/rules
++ - Update libxml2 bug number in comment for override_dh_auto_test-indep
++ target.
++ * debian/scripts/Debian.m2
++ - New Macaulay2 package containing various helper functions for
++ maintaining the Debian package; replaces copyright-helper.m2,
++ generate-examples.m2, and skip-test.m2.
++
++ -- Doug Torrance <dtorrance@piedmont.edu> Wed, 22 Sep 2021 21:29:54 -0400
++
++macaulay2 (1.18+ds-3) unstable; urgency=medium
++
++ * debian/patches/skip-failing-package-tests.patch
++ - Skip check(5, "MultiprojectiveVarieties"); failing on armhf.
++ * debian/rules
++ - Allow examples to fail on mipsel, mips64el, and ppc64el buildd
++ machines without causing the entire build to fail.
++ * debian/scripts/generate-examples.m2
++ - Cache new failing examples:
++ + HyperplaneArrangements::arrangement(String,PolynomialRing);
++ failing on ppc64el.
++ + SpectralSequences::pruningMaps(SpectralSequencePage), failing on
++ mipsel and mips64el.
++
++ -- Doug Torrance <dtorrance@piedmont.edu> Thu, 16 Sep 2021 15:22:15 -0400
++
++macaulay2 (1.18+ds-2) unstable; urgency=medium
++
++ * debian/control
++ - Move dh-elpa from Build-Depends to Build-Depends-Indep (as
++ dh-sequence-elpa).
++ * debian/patches/skip-failing-core-tests.patch
++ - Skip ComputationsBook::constructions; failing on s390x.
++ * debian/patches/skip-failing-package-tests.patch
++ - Skip new failing tests:
++ + check({1, 2, 3}, "CharacteristicClasses"); failing on armhf and
++ s390x.
++ + check(68, "EngineTests"); failing on armhf and s390x.
++ + check(21, "IntegralClosure"); failing on armhf.
++ + check(3, "MultiprojectiveVarieties"); failing on armhf.
++ + check(4, "NumericalImplicitization"); failing with LAPACK 3.10.0.
++ + check({0, 1, 2, 3, 5, 7, 8, 9, 10}, "SegreClasses"); failing on
++ armhf and s390x.
++ + check(3, "SparseResultants"); failing on armhf.
++ + check({0, 8}, "SpecialFanoFourfolds"); failing on armhf.
++ * debian/rules
++ - Drop --with elpa, unnecessary now that dh-sequence-elpa is in
++ Build-Depends-Indep.
++ - New execute_before_dh_missing target; remove emacs files when not
++ building elpa-macaulay2; otherwise dh_missing will fail.
++ - Skip validate-html check pending libxml2 bug
++ * debian/scripts/generate-examples.m2
++ - Drop dir argument from generateExample; it will always be the debian
++ directory.
++ - Cache new failing examples:
++ + Macaulay2Doc::MinimalGenerators; failing on s390x.
++ + MixedMultiplicity::mixedVolume; failing on mipsel.
++ + MultiprojectiveVarieties::image(MultirationalMap); failing on
++ s390x.
++ + SparseResultants::char(SparseResultant); failing on s390x
++ (Closes: #993923).
++ * debian/scripts/m2-get-orig-source.sh
++ - Remove dch backup file if present before calling dch to update
++ version number.
++ * debian/scripts/skip-test.m2
++ - New script; helper function for skipping tests
++ * debian/source/lintian-overrides
++ - Add overrides for source-is-missing false positives.
++ * debian/tests/control
++ - Clean up using wrap-and-sort.
++
++ -- Doug Torrance <dtorrance@piedmont.edu> Thu, 09 Sep 2021 05:36:24 -0400
++
++macaulay2 (1.18+ds-1) unstable; urgency=medium
++
++ * Upload to unstable.
++ * debian/control
++ - Bump Standards-Version to 4.6.0.
++ * debian/patches/skip-failing-package-tests.patch
++ - Skip check(90, "EngineTests"); failing on mips64el.
++ * debian/patches/use-cached-examples.m2
++ - Add TestIdeals package; it was missing and so we weren't actually
++ using the cached example.
++ * debian/rules
++ - Add VERSION variable; removes duplicate code.
++ * debian/scripts/copyright-helper.m2
++ - Improve regular expressions for matching author names.
++ - Add reminder to confirm that a package's copyright information is
++ correct.
++ * debian/scripts/generate-examples.m2
++ - Cache new failing examples, updating d/examples and
++ d/patches/use-cached-examples accordingly:
++ + Elimination::discriminant(RingElement,RingElement); failing on
++ ppc64el.
++ + Three SpectralSequences examples; failing on mipsel.
++ - Raise error if a package hasn't been added to
++ use-cached-examples.patch.
++ * debian/scripts/m2-get-orig-source.sh
++ - Use getopt for command line args
++ - New --no-tarball option; only updates version number.
++ - Add --help option.
++ - Only update d/changelog if necessary.
++ - Don't generate orig tarball if it already exists.
++
++ -- Doug Torrance <dtorrance@piedmont.edu> Fri, 20 Aug 2021 21:34:00 -0400
++
++macaulay2 (1.18+ds-1~exp3) experimental; urgency=medium
++
++ * debian/copyright
++ - Add entries for packages that had previously been omitted.
++ + NCAlgebraV2
++ + SubalgebraBases
++ + SuffixTrees
++ * debian/patches/skip-failing-core-tests.patch
++ - Skip plethysms test; failing on mipsel.
++ - Stop schur-2 test a bit earlier; failing on armel and armhf.
++ * debian/scripts/copyright-helper.m2
++ - Improve regex for determining whether packages are actually listed in
++ d/copyright.
++ - Simplify missingPackages function; detect path to d/copyright instead
++ of requiring the user to specify it.
++ - Improve missingPackages function by searching for packages in the
++ source directory (including undistributed packages) instead of just
++ the ones listed in the version hash table.
++ * debian/scripts/generate-examples.m2
++ - Cache new failing examples, updating d/examples and
++ d/patches/use-cached-examples accordingly:
++ + PrimaryDecomposition::primaryDecomposition
++ + M0nbar::writeCurveInSingletonSpineBasis
++ + M0nbar::writeCurveInSingletonSpineBasis(ZZ,List)
++ - Simplify generateExamples function; detect path to debian directory
++ instead of requiring the user to specify it.
++ * debian/tests/control
++ - Remove polymake from Depends; not necessary for most tests and not
++ available in armel.
++
++ -- Doug Torrance <dtorrance@piedmont.edu> Thu, 29 Jul 2021 07:50:46 -0400
++
++macaulay2 (1.18+ds-1~exp2) experimental; urgency=medium
++
++ * debian/gbp.conf
++ - Set default debian-branch to debian/master.
++ * debian/patches/hardening.patch
++ - New patch; Don't override -fstack-protector-strong from dpkg-buildflags.
++ * debian/patches/fix-visualize-firefox.patch
++ - Switch from Forwarded to Applied-Upstream.
++ * debian/patches/reproducible-tvalues.patch
++ - New patch; sort files in d directory when making tvalues.m2. Otherwise,
++ tvalues.m2 is not reproducible.
++ * debian/patches/skip-failing-core-tests.patch
++ - Skip core-tests.m2.
++ * debian/patches/skip-failing-package-tests.patch
++ - Skip new failing tests:
++ + check(8, "DiffAlg")
++ + check(7, "MultiprojectiveVarieties")
++ + check(3, "NumericalImplicitization")
++ + check(8, "NumericalImplicitization")
++ + check(0, "Topcom")
++ - Add missing Bug field.
++ * debian/salsa-ci.yml
++ - Allow reprotest to fail in Salsa pipeline.
++ * debian/scripts/generate-examples.m2
++ - Cache new failing examples:
++ + GraphicalModelsMLE::solverMLE(...,RealPrecision=>...)
++ + MultiprojectiveVarieties::EmbeddedProjectiveVariety ===>
++ EmbeddedProjectiveVariety
++ + SimplicialDecomposability::isSheddingVertex
++ + SpecialFanoFourfolds::toGrass(EmbeddedProjectiveVariety)
++ + SRdeformations::complement(Complex)
++ - Add generated examples to debian/examples.
++ - Set AuxiliaryFiles and CacheExampleOutput options for affected packages
++ in debian/patches/use-cached-examples.patch.
++ - Don't reload package when generating examples unless necessary. The
++ Macaulay2Doc examples were really slowing down the script -- now we only
++ need to wait for the first one.
++ - Improve error handling; only raise an error if we have extra .out files.
++
++ -- Doug Torrance <dtorrance@piedmont.edu> Tue, 27 Jul 2021 10:43:17 -0400
++
++macaulay2 (1.18+ds-1~exp1) experimental; urgency=medium
++
++ * debian/control
++ - Add libmpfi-dev and libtbb-dev to Build-Depends; needed for new
++ features added upstream.
++ - Remove imagemagick from Suggests; no longer required by the
++ Graphs package as it now uses xdg-open to open generated images.
++ * debian/copyright
++ - Remove paragraph from Cygwin files that have been removed from
++ source.
++ - Add/update paragraphs for new/modified packages.
++ * debian/examples
++ - Add cached examples generated by d/scripts/generate-examples.m2.
++ * debian/macaulay2-common.info
++ - New file; use dh_installinfo to install info files instead of
++ dh_install. This way, we can more easily support builds with
++ "nodoc" in DEB_BUILD_OPTIONS.
++ * debian/macaulay2-common.lintian-overrides
++ - Add package-contains-documentation-outside-usr-share-doc
++ override for new file.
++ * debian/patches
++ - Refresh for new upstream release.
++ - Remove patches applied or otherwise made unnecessary upstream.
++ + dont-capture-check-core-32-bit.patch
++ + dont-capture-diffalg-tests.patch
++ + smaller-points-examples.patch
++ + use-debian-applications.patch
++ * debian/patches/fix-visualize-firefox.patch
++ - New patch; fix Visualize package in Firefox (symlinks to assets
++ weren't working).
++ * debian/patches/remove-build-paths-from-docs
++ - Remove patch; we now cache examples that were causing
++ reproducibility issues.
++ * debian/patches/skip-failing-{core,package}-tests
++ - Stop skipping tests that have been fixed upstream and start
++ skipping new tests that have caused build errors.
++ - Better document which tests go with which upstream issues.
++ * debian/patches/use-cached-examples.patch
++ - New patch replacing use-canned-examples.patch. Set affected
++ packages to use cached examples that are generated by
++ d/scripts/generate-examples.patch.
++ * debian/README.md
++ - Update descriptions of packages in Suggests.
++ * debian/rules
++ - Export MakeDocumentation variable to support builds with
++ "nodoc" in DEB_BUILD_OPTIONS.
++ - Set installation directory for Emacs files; previously this
++ was done in use-dh-elpa.patch.
++ - Move cached examples generated by d/scripts/generate-examples.m2
++ into the build directory so that they may be properly installed
++ and then clean up afterwards.
++ - Use $(MAKE) instead of explicitly calling make.
++ * debian/salsa-ci.yml
++ - Add Salsa pipelines config file.
++ * debian/scripts/generate-examples.m2
++ - New script; generate examples for the documentation for certain
++ cases which have been known to cause build errors. Previously,
++ we used canned examples, but cached examples are treated just like
++ standard examples that are generated during build.
++ * debian/scripts/m2-get-orig-source.sh
++ - Add support for version numbers containing "-rc".
++ - Explicitly call GNU awk, as it is necessary for the script to run
++ properly.
++ * debian/source/lintian-overrides
++ - Update package-does-not-install-examples overrides.
++ * debian/watch
++ - Add support for version numbers containing "-rc".
++ - Use more general regular expression to find GitHub releases.
++
++ -- Doug Torrance <dtorrance@piedmont.edu> Wed, 07 Jul 2021 13:08:53 +0530
++
++macaulay2 (1.17.1+ds-2) unstable; urgency=medium
++
++ * debian/patches/dont-capture-check-core-32-bit.patch
++ - New patch; don't use capture when running Core and Cremona tests
++ on 32-bit architectures. Otherwise, we run out of memory.
++ * debian/patches/dont-capture-diffalg-tests.patch
++ - New patch; don't use "capture" for DiffAlg package tests.
++ * debian/patches/skip-failing-package-tests.patch
++ - Add core-tests.m2; contains a test with an alarm that isn't
++ caught when running "check".
++ - Skip another segfaulting MinimalPrimes test.
++ * debian/patches/smaller-points-examples.patch
++ - New patch; Remove examples showing less efficient algorithms
++ from Points docs.
++ * debian/patches/use-canned-examples.patch
++ - Add example from TestIdeals package that has been known to
++ segfault.
++ * debian/rules
++ - Exclude .m2 files from being gzipped by dh_compress. Otherwise,
++ package tests may be compressed and won't be found by "check".
++ - Only set VERBOSE variable if DEB_BUILD_OPTIONS doesn't include
++ "terse".
++
++ -- Doug Torrance <dtorrance@piedmont.edu> Sun, 24 Jan 2021 08:57:47 -0500
++
++macaulay2 (1.17.1+ds-1) unstable; urgency=medium
++
++ * New upstream release.
++ * debian/clean
++ - Add autogenerated file debian/macaulay2-pkg.el.
++ * debian/control
++ - Add packages to Recommends.
++ + info: info is used by "infoHelp" function.
++ + texlive-latex-base: latex is used by "showTex" function.
++ + xdg-utils: xdg-open is used by "show" function.
++ + xterm: xterm is used by "edit" function.
++ - Add packages to Suggests.
++ + fig2dev: Used by gfanInterface package.
++ + dot2tex/graphviz/imagemagick: Used by Graphs package.
++ + pdf-viewer: Used by Posets package.
++ - Switch from node-jquery to libjs-jquery (versioned, to ensure
++ that the minified jQuery source is not a symbolic link) in
++ Build-Depends-Indep.
++ * debian/copyright
++ - Various updates for new release.
++ * debian/elpa-macaulay2.{docs,elpa}
++ - Update paths to Emacs-related files files.
++ * debian/macaulay2-common.linktrees
++ - Update path the minified jQuery source needed by Visualize package.
++ Previously, it was shipped in the node-jquery package, but was
++ moved to libjs-jquery in version 3.5.1+dfsg+~3.5.5-4.
++ * debian/patches
++ - Refresh for new release.
++ - Previous skip-*-{example,test}.patch's have been combined into
++ three patches for simplicity:
++ + used-canned-examples.patch: Canned versions of examples that
++ have been known to fail.
++ + skip-failing-core-tests.patch: Tests in M2/Macaulay2/tests that
++ have been known to fail.
++ + skip-package-tests.patch: Package tests that have been known
++ to fail. We also use the new "-* no-check-flag *-" feature
++ to skip these tests rather than patching them out entirely.
++ * debian/patches/git-description.patch
++ - New patch; provide version#"git description".
++ * debian/patches/use-debian-applications.patch
++ - New patch; tell gfanInterface package where to find fig2dev and
++ Posets package to use xdg-open to view pdf files.
++ * debian/patches/use-dh-elpa.patch
++ - New patch; modifications to work with dh_elpa.
++ * debian/README.Debian
++ - Remove section on orig tarballs; they are no longer generated on
++ Salsa.
++ - Add section discussing packages listed in Suggests.
++ * debian/rules
++ - Add execute_after_dh_install-arch target to remove empty directory.
++ - Simplify debian/macaulay2-pkg.el rule.
++ - Add get-orig-source target.
++ * debian/scripts/copyright-helper.m2
++ - Move file into new debian/scripts directory.
++ * debian/scripts/m2-get-orig-source.sh
++ - New script to generate orig tarballs.
++ * debian/scripts/m2-tarball-warning.sh
++ - New script to display a warning if using uscan to generate a
++ tarball.
++ * debian/tests/control
++ - Add messages before each stage of testing.
++ - Add "M2 --check 2" for testing Core package.
++ * debian/watch
++ - Upstream has begun tagging stable releases, so we switch to
++ GitHub for the link. However, uscan should only be used
++ to check for new releases, as the tarballs it generates will
++ be missing the files from the M2-emacs submodule.
++
++ -- Doug Torrance <dtorrance@piedmont.edu> Sat, 16 Jan 2021 18:14:58 -0500
++
++macaulay2 (1.16.99+git40.3a512e5+ds-1~exp1) experimental; urgency=medium
++
++ * New upstream beta release.
++ * debian/control
++ - Add packages to Build-Depends.
++ + dh-linktree: We now use this debhelper addon to create symbolic
++ links to Debian copies of GPL licenses and various Javascript
++ libraries instead of patching the files directly to point to
++ them.
++ + libboost-regex-dev: Replaces embedded copy of GNU regex library
++ used in previous releases.
++ + libboost-stacktrace-dev: Improves readability of stack traces.
++ - Add Build-Depends-Indep.
++ + jdupes: Moved from Build-Depends; only needed for building
++ documentation.
++ + Various fonts and Javascript libraries; needed during build
++ by dh_linktree.
++ + w3c-markup-validator: Used to validate html in documentation.
++ - Bump Standards-Version to 4.5.1.
++ - Remove Javascript libraries from Recommends. They will now be
++ pulled in by ${misc:Depends} thanks to dh_linktree.
++ - Add emacs to Recommends for elpa-macaulay2.
++ * debian/copyright
++ - Add KaTeX files to Files-Excluded.
++ - Add paragraph for KaTeX files.
++ - Remove paragraph for embedded GNU regex library.
++ - Add licensing information for new packages added since previous
++ release.
++ * debian/copyright-helper.m2
++ - New Macaulay2 script to help generate debian/copyright paragraphs
++ for new packages.
++ * debian/macaulay2-common.linktrees
++ - New file; tell dh_linktree where Debian copies of GPL licenses
++ and Javascript libraries are located.
++ * debian/macaulay2-common.lintian-overrides
++ - Update package-contains-documentation-outside-usr-share-doc
++ overrides for files that have changed since previous release.
++ * debian/missing-source/render-a11y-string.js
++ - Add source for minified KaTeX file that isn't in Debian yet.
++ * debian/patches
++ - Remove patches applied (or otherwise made unnecessary) upstream.
++ + fix-*.patch
++ + hardening.patch
++ + remove-build-paths-from-cached-files.patch
++ + remove-build-paths-from-docs.patch (Patch remains, but only
++ increases the default print width of examples.)
++ + use-debian-{4ti2,cohomcalg,csdp,gfan,nauty,normaliz,topcom}.patch
++ - Refresh remaining patches for new upstream version.
++ * debian/patches/skip-computations-book-test.patch
++ - Rename from fix-computations-book-test.patch; the behavior of the
++ test is too unpredictable between different architectures, so
++ we skip it entirely instead of trying to fix it.
++ * debian/patches/skip-*-{example,test}.patch
++ - Skip some additional examples and tests that have been known
++ to fail on various architectures.
++ * debian/patches/use-debian-{gpl,javascript}.patch
++ - Remove patches; we use dh_linktree for the same purpose instead.
++ * debian/README.Debian
++ - Add information about KaTeX to "Javascript libraries" section.
++ - Add section on using dwww to view the Macaulay2 documentation.
++ * debian/rules
++ - Use dh_linktree addon.
++ - New execute_before_dh_auto_build target; touch KaTeX files to
++ prevent html-check-links test from failing.
++ - Drop check for "nocheck" in DEB_BUILD_OPTIONS from
++ override_dh_auto_test rule; not necessary in debhelper 13.
++ We also append "-arch" to this target.
++ - New override_dh_auto_test-indep rule to validate html docs.
++ - Switch override_dh_link target that calls jdupes to
++ execute_before_dh_link-indep target.
++ - Switch override_dh_elpa target that generates -pkg.el file
++ to execute_before_dh_elpa target.
++ * debian/tests/check.m2
++ - Remove file; no longer needed.
++ * debian/tests/control
++ - Use upstream's updated --check command line argument to run
++ continuous integration tests.
++ * debian/upstream/metadata
++ - Add recent NSF grants to Funding.
++ - Add new Macaulay2Web interface to Webservice.
++
++ -- Doug Torrance <dtorrance@piedmont.edu> Sat, 26 Dec 2020 00:29:42 -0500
++
++macaulay2 (1.16+git55.94c4b7d+ds-2) unstable; urgency=medium
++
++ * Upload to unstable.
++
++ -- Doug Torrance <dtorrance@piedmont.edu> Wed, 04 Nov 2020 20:54:18 -0500
++
++macaulay2 (1.16+git55.94c4b7d+ds-2~exp1) experimental; urgency=medium
++
++ * Source-only upload for migration to testing.
++ * debian/control
++ - Add libmps-dev to Build-Depends.
++ - Add lsb-release to Build-Depends so configure can detect the
++ Debian release.
++ - Fix URL in VCS-* fields.
++ * debian/elpa-test
++ - Disable dh_elpa_test so it doesn't override dh_auto_test.
++ * debian/patches/skip-mpsolve-for-now.patch
++ - Remove patch; mpsolve is now in Debian.
++ * debian/patches/{fix,skip}-*-{example,test}.patch:
++ - New patches; fix or skip examples or tests causing build
++ failures on various architectures.
++ * debian/README.Debian
++ - Remove section on 'roots' function. It is now available since
++ mpsolve is in Debian.
++
++ -- Doug Torrance <dtorrance@piedmont.edu> Wed, 04 Nov 2020 20:54:18 -0500
++
++macaulay2 (1.16+git55.94c4b7d+ds-1) unstable; urgency=low
++
++ * Initial release (Closes: #439888).
++
++ -- Doug Torrance <dtorrance@piedmont.edu> Sun, 04 Oct 2020 16:31:20 -0400
--- /dev/null
--- /dev/null
++debian/macaulay2-pkg.el
++M2/usr-host/lib/libmissing.a
--- /dev/null
--- /dev/null
++Source: macaulay2
++Section: math
++Priority: optional
++Maintainer: Debian Math Team <team+math@tracker.debian.org>
++Uploaders: Doug Torrance <dtorrance@debian.org>
++Build-Depends: 4ti2,
++ bison,
++ cohomcalg,
++ coinor-csdp,
++ debhelper-compat (= 13),
++ dh-linktree,
++ fflas-ffpack,
++ flex,
++ gfan,
++ install-info,
++ libatomic-ops-dev,
++ libboost-dev,
++ libboost-math-dev,
++ libboost-regex-dev,
++ libboost-stacktrace-dev,
++ libcdd-dev,
++ libeigen3-dev,
++ libffi-dev,
++ libflint-dev (>= 2.6.0~),
++ libfrobby-dev,
++ libgc-dev,
++ libgdbm-dev,
++ libgivaro-dev,
++ libglpk-dev,
++ libgtest-dev,
++ liblapack-dev,
++ liblzma-dev,
++ libmathic-dev,
++ libmathicgb-dev (>= 1.0~git20220225~),
++ libmemtailor-dev,
++ libmpfi-dev,
++ libmpfr-dev,
++ libmps-dev,
++ libntl-dev,
++ libreadline-dev,
++ libsingular4-dev (>= 1:4.2.0~),
++ libtbb-dev,
++ libxml2-dev,
++ lrslib,
++ lsb-release,
++ nauty,
++ normaliz,
++ pkg-config,
++ python3-dev <!nopython>,
++ singular-data,
++ time,
++ topcom
++Build-Depends-Indep: dh-sequence-elpa,
++ faketime,
++ fonts-glyphicons-halflings,
++ fonts-katex,
++ gdbmtool,
++ jdupes,
++ libjs-bootsidemenu,
++ libjs-bootstrap,
++ libjs-d3,
++ libjs-jquery (>= 3.5.1+dfsg+~3.5.5-4),
++ libjs-katex (>= 0.11.0~),
++ libjs-nouislider,
++ libjs-three,
++ libjs-underscore,
++ node-clipboard,
++ node-css-loader <!nodoc>,
++ node-highlight.js <!nodoc>,
++ node-import-local <!nodoc>,
++ node-interpret <!nodoc>,
++ node-rechoir <!nodoc>,
++ node-style-loader <!nodoc>,
++ npm <!nodoc>,
++ pkg-js-tools <!nodoc>,
++ w3c-markup-validator <!nodoc>,
++ webpack <!nodoc>
++Standards-Version: 4.6.2
++Homepage: http://macaulay2.com
++Vcs-Browser: https://salsa.debian.org/math-team/macaulay2
++Vcs-Git: https://salsa.debian.org/math-team/macaulay2.git
++Rules-Requires-Root: no
++
++Package: macaulay2
++Architecture: any
++Depends: gdbmtool,
++ macaulay2-common (= ${source:Version}),
++ singular-data,
++ ${misc:Depends},
++ ${shlibs:Depends}
++Recommends: 4ti2,
++ cohomcalg,
++ coinor-csdp,
++ elpa-macaulay2 (= ${source:Version}),
++ gfan,
++ info,
++ lrslib,
++ nauty,
++ normaliz,
++ texlive-latex-base,
++ topcom,
++ www-browser,
++ xdg-utils,
++ xterm
++Suggests: bergman,
++ dot2tex,
++ fig2dev,
++ graphviz,
++ pdf-viewer,
++ phcpack,
++ polymake,
++ qepcad,
++ sdpa
++Description: Software system for algebraic geometry research
++ Macaulay 2 is a software system for algebraic geometry research, written by
++ Daniel R. Grayson and Michael E. Stillman. Based on Groebner bases, it
++ provides algorithms for computing homological invariants of rings and
++ modules.
++ .
++ This package contains the architecture dependent portion of Macaulay2.
++
++Package: macaulay2-common
++Architecture: all
++Multi-Arch: foreign
++Depends: ${misc:Depends}
++Description: Software system for algebraic geometry research (common files)
++ Macaulay 2 is a software system for algebraic geometry research, written by
++ Daniel R. Grayson and Michael E. Stillman. Based on Groebner bases, it
++ provides algorithms for computing homological invariants of rings and
++ modules.
++ .
++ This package contains the architecture independent portion of Macaulay2, and is
++ normally installed automatically when one of the architecture dependent
++ packages is installed.
++
++Package: elpa-macaulay2
++Architecture: all
++Multi-Arch: foreign
++Section: editors
++Depends: ${elpa:Depends}, ${misc:Depends}
++Recommends: emacs
++Description: Software system for algebraic geometry research (Emacs package)
++ Macaulay 2 is a software system for algebraic geometry research, written by
++ Daniel R. Grayson and Michael E. Stillman. Based on Groebner bases, it
++ provides algorithms for computing homological invariants of rings and
++ modules.
++ .
++ This package contains the modes for running Macaulay2 within Emacs and
++ editing Macaulay2 code.
--- /dev/null
--- /dev/null
++Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
++Upstream-Name: Macaulay2
++Source: http://macaulay2.com
++Files-Excluded:
++ M2/Macaulay2/packages/Style/katex
++ M2/Macaulay2/packages/Visualize/css/BootSideMenu.css
++ M2/Macaulay2/packages/Visualize/css/bootstrap*.min.css
++ M2/Macaulay2/packages/Visualize/css/nouislider.*
++ M2/Macaulay2/packages/Visualize/fonts
++ M2/Macaulay2/packages/Visualize/js/BootSideMenu.js
++ M2/Macaulay2/packages/Visualize/js/bootstrap.min.js
++ M2/Macaulay2/packages/Visualize/js/clipboard.min.js
++ M2/Macaulay2/packages/Visualize/js/d3.v3.min.js
++ M2/Macaulay2/packages/Visualize/js/jquery-1.11.3.min.js
++ M2/Macaulay2/packages/Visualize/js/nouislider.min.js
++ M2/Macaulay2/packages/Visualize/js/three.min.js
++ M2/Macaulay2/packages/Visualize/js/underscore.js
++Comment: Files-Excluded field removes embedded Javascript libraries.
++ .
++ An email from Dan Grayson dated 2020-08-03 clarified the
++ licenses of code contributed by authors other than himself and Mike
++ Stillman:
++ .
++ "A priori the author of a file is the copyright holder, by default.
++ We haven't always been alert about asking authors to put their code
++ in the public domain, although I have done that in a few
++ cases. . . My general attitude is that anyone who contributes code to
++ us is putting it in the public domain, implicitly."
++
++Files: *
++Copyright: 1993-2019 Daniel R. Grayson <dan@math.uiuc.edu>
++ 1993-2020 Michael E. Stillman <mike@math.cornell.edu>
++License: GPL-2+
++
++Files: debian/*
++Copyright: 2015-2022 Doug Torrance <dtorrance@debian.org>
++License: GPL-2+
++
++Files: M2/cmake/FindAtomicOps.cmake
++ M2/cmake/FindBDWGC.cmake
++ M2/cmake/FindFactory.cmake
++ M2/cmake/FindFlint.cmake
++ M2/cmake/FindFrobby.cmake
++ M2/cmake/FindGDBM.cmake
++ M2/cmake/FindMathic.cmake
++ M2/cmake/FindMathicgb.cmake
++ M2/cmake/FindMemtailor.cmake
++ M2/cmake/FindMPIR.cmake
++ M2/cmake/FindMPSolve.cmake
++ M2/cmake/FindNTL.cmake
++Copyright: 2020 Mahrud Sayrafi <mahrud@umn.edu>
++Comment: The files themselves only contain the line "Redistribution
++ and use is allowed according to the terms of the BSD license." In an
++ email, the author confirmed that the license in question is the
++ 3-clause version, which is the same license used by CMake itself. See
++ https://cmake.org/licensing/. This comment also applies to the other
++ Find*.cmake files below.
++License: BSD-3-Clause
++
++Files: M2/cmake/FindCDDLIB.cmake
++Copyright: 2006 Laurent Montel <montel@kde.org>
++ 2018 Thomas Baumgart <tbaumgart@kde.org>
++ 2020 Mahrud Sayrafi <mahrud@umn.edu>
++License: BSD-3-Clause
++
++Files: M2/cmake/FindGMP.cmake
++Copyright: 2016 Jack Poulson <jack.poulson@gmail.com>
++ 2020 Mahrud Sayrafi <mahrud@umn.edu>
++License: BSD-3-Clause
++
++Files: M2/cmake/FindMPFR.cmake
++Copyright: 2006, 2007 Montel Laurent <montel@kde.org>
++ 2008, 2009 Gael Guennebaud <g.gael@free.fr>
++ 2010 Jitse Niesen <jitse@maths.leeds.ac.uk>
++ 2015 Jack Poulson <jack.poulson@gmail.com>
++ 2020 Mahrud Sayrafi <mahrud@umn.edu>
++License: BSD-3-Clause
++
++Files: M2/cmake/FindTBB.cmake
++Copyright: 2012 Sergiu Dotenco
++License: Expat
++
++Files: M2/config/ax_compare_version.m4
++Copyright: 2008 Tim Toolan <toolan@ele.uri.edu>
++License: FSFAP
++
++Files: M2/config/ax_func_accept_argtypes.m4
++Copyright: 2008 Daniel Richard G. <skunk@iskunk.org>
++License: GPL-2+ with autoconf exception
++
++Files: M2/config/ax_prog_cc_for_build.m4
++Copyright: 2008 Paolo Bonzini <bonzini@gnu.org>
++License: FSFAP
++
++Files: M2/config/gtest.m4
++Copyright: 2012 Canonical, Ltd.
++License: Expat
++
++Files: M2/Macaulay2/d/boost-regex.cpp
++ M2/Macaulay2/d/regex.dd
++ M2/Macaulay2/m2/markdown.m2
++ M2/Macaulay2/m2/regex.m2
++Copyright: 2020 Mahrud Sayrafi
++Comment: See Comment at top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/d/python-c.c
++Copyright: 2000-20009 Alex Martelli
++ 2008-2022 Case Van Horsen
++Comment: GMP <-> Python integer conversion routines from gmpy2
++License: LGPL-3.0+
++
++Files: M2/Macaulay2/e/bibasis/*
++ M2/Macaulay2/packages/BIBasis.m2
++Copyright: 2006-2011 Mikhail V. Zinin <mzinin@gmail.com>
++License: GPL-2+
++
++Files: M2/Macaulay2/e/franzi*
++Copyright: Franziska Hinkelmann
++License: public-domain
++
++Files: M2/Macaulay2/e/localring.cpp
++ M2/Macaulay2/e/localring.hpp
++ M2/Macaulay2/e/mutablecomplex.cpp
++ M2/Macaulay2/e/mutablecomplex.hpp
++ M2/Macaulay2/m2/localring.m2
++ M2/Macaulay2/packages/PruneComplex*
++Copyright: 2017 Mahrud Sayrafi <mahrud@berkeley.edu>
++ 2017 Mike Stillman <mike@math.cornell.edu>
++Comment: See Comment at the top of this file.
++License: GPL-2+ and public-domain
++
++Files: M2/Macaulay2/e/mpreal.h
++Copyright: 2008-2019 Pavel Holoborodko
++License: GPL-3+
++
++Files: M2/Macaulay2/e/mutablemat-imp.hpp
++ M2/Macaulay2/e/NAG.cpp
++ M2/Macaulay2/e/NAG.hpp
++ M2/Macaulay2/e/SLP.cpp
++ M2/Macaulay2/e/SLP.hpp
++ M2/Macaulay2/e/SLP-defs.hpp
++ M2/Macaulay2/e/SLP-imp.hpp
++Copyright: 2008, 2015 Anton Leykin and Mike Stillman
++Comment: Anton Leykin's code in this file is in the public domain.
++License: GPL-2+ and public-domain
++
++Files: M2/Macaulay2/e/unit-tests/GivaroTest.cpp
++Copyright: 1994-2009 The Givaro group
++License: CECILL-B
++
++Files: M2/Macaulay2/editors/pygments/macaulay2.py.in
++Copyright: 2006-2021 Pygments team
++Comment: The copyright header says to "see AUTHORS". This refers to
++ the AUTHORS file in the Pygments source. See the Debian "pygments"
++ source package or https://github.com/pygments/pygments.
++License: BSD-2-clause
++
++Files: M2/Macaulay2/editors/vim/m2.vim.plugin
++Copyright: 2010 David Cook II <dcook@ms.uky.edu>
++License: public-domain
++
++Files: M2/Macaulay2/m2/book.m2
++Copyright: 1997 Daniel R. Grayson
++ 2020 Mahrud Sayrafi
++Comment: See Comment at the top of this file.
++License: GPL-2+ and public-domain
++
++Files: M2/Macaulay2/m2/expressions.m2
++Copyright: 1992-2002 Daniel R. Grayson
++ 2018 P. Zinn-Justin
++Comment: See M2/LICENSING-NOTES
++License: GPL-2+ and public-domain
++
++Files: M2/Macaulay2/m2/fano.m2
++ M2/Macaulay2/tests/normal/testsubring.m2
++Copyright: 1996, 1997 Michael Stillman and David Eisenbud
++License: GPL-2+
++
++Files: M2/Macaulay2/m2/hypertext.m2
++Copyright: 1993-2003 Daniel R. Grayson
++ 2020 P. Zinn-Justin
++ 2020 Mahrud Sayrafi
++Comment: See M2/LICENSING-NOTES
++License: GPL-2+ and public-domain
++
++Files: M2/Macaulay2/packages/PrimaryDecomposition*
++Copyright: 2020 Mike Stillman <mike@math.cornell.edu>
++ 2020 Carolyn Yackel <cyackel@math.indiana.edu>
++ 2020 Justin Chen <justin.chen@math.gatech.edu>
++ 2020 Mahrud Sayrafi <mahrud@umn.edu>
++Comment: See Comment at the top of this file.
++License: GPL-2+ and public-domain
++
++Files: M2/Macaulay2/m2/minPres.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/minimalPresentation-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/trim-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/overviewB.m2
++ M2/Macaulay2/packages/PrimaryDecomposition/primaryDecomposition-test.m2
++Copyright: 2006 Amelia Taylor
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/m2/schubert.m2
++Copyright: Bernd Sturmfels
++ Josephine Yu
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/m2/webapp.m2
++ M2/Macaulay2/packages/CotangentSchubert*
++ M2/Macaulay2/packages/MergeTeX*
++ M2/Macaulay2/packages/OnlineLookup.m2
++ M2/Macaulay2/packages/VectorGraphics*
++Copyright: 2018-2022 Paul Zinn-Justin <pzinn@unimelb.edu.au>
++Comment: See M2/LICENSING-NOTES
++License: public-domain
++
++Files: M2/Macaulay2/packages/AdjointIdeal*
++ M2/Macaulay2/packages/ConvexInterface*
++ M2/Macaulay2/packages/MapleInterface*
++ M2/Macaulay2/packages/Parametrization*
++ M2/Macaulay2/packages/SRdeformations.m2
++Copyright: 2009 Janko Boehm <boehm@math.uni-sb.de>
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/AlgebraicSplines.m2
++Copyright: 2014-2015 Mike Dipasquale <mdipasq@okstate.edu>
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/AnalyzeSheafOnP1.m2
++ M2/Macaulay2/packages/ChainComplexOperations.m2
++ M2/Macaulay2/packages/CompleteIntersectionResolutions.m2
++ M2/Macaulay2/packages/HigherCIOperators.m2
++ M2/Macaulay2/packages/HomotopyLieAlgebra.m2
++ M2/Macaulay2/packages/Isomorphism.m2
++ M2/Macaulay2/packages/MCMApproximations.m2
++Copyright: 2013, 2015, 2017, 2019, 2021, 2022 David Eisenbud <de@msri.org>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/AssociativeAlgebras*
++ M2/Macaulay2/packages/NCAlgebraV2.m2
++ M2/Macaulay2/packages/undistributed-packages/SuffixTrees.m2
++Copyright: 2016, 2021 Frank Moore <moorewf@wfu.edu>
++ 2016, 2021 Mike Stillman <mike@math.cornell.edu>
++Comment: See Comment at the top of this file.
++License: GPL-2+ and public-domain
++
++Files: M2/Macaulay2/packages/AInfinity.m2
++ M2/Macaulay2/packages/BeginningMacaulay2*
++ M2/Macaulay2/packages/EagonResolution.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/pushForward-doc.m2
++ M2/Macaulay2/packages/MonomialOrbits.m2
++ M2/Macaulay2/packages/Truncations.m2
++ M2/Macaulay2/packages/undistributed-packages/RandomSearch.m2
++Copyright: 2006, 2009, 2018, 2020, 2021 David Eisenbud <de@msri.org>
++ 2006, 2009, 2018, 2020, 2021 Mike Stillman <mike@math.cornell.edu>
++Comment: See Comment at the top of this file.
++License: GPL-2+ and public-domain
++
++Files: M2/Macaulay2/packages/Bertini*
++Copyright: 2020 Elizabeth Gross <elizabeth.gross@sjsu.edu>
++ 2020 Jose Israel Rodriguez <Jose@math.wisc.edu>
++ 2020 Dan Bates <bates@math.colostate.edu>
++ 2020 Anton Leykin <leykin@math.gatech.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/BettiCharacters.m2
++ M2/Macaulay2/packages/HighestWeights*
++Copyright: 2014, 2021 Federico Galetto <galetto.federico@gmail.com>
++License: GPL-3+
++
++Files: M2/Macaulay2/packages/BGG.m2
++Copyright: 2016 Hirotachi Abo <abo@uidaho.edu>
++ 2016 Wolfram Decker <decker@math.uni-sb.de>
++ 2016 David Eisenbud <de@msri.org>
++ 2016 Frank Schreyer <schreyer@math.uni-sb.de>
++ 2016 Gregory G. Smith <ggsmith@mast.queensu.ca>
++ 2016 Mike Stillman <mike@math.cornell.edu>
++Comment: See Comment at the top of this file.
++License: GPL-2+ and public-domain
++
++Files: M2/Macaulay2/packages/BinomialEdgeIdeals.m2
++Copyright: 2015 Tobias Windisch <windisch@ovgu.de>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/Binomials.m2
++ M2/Macaulay2/packages/Cyclotomic.m2
++Copyright: 2009-2014 Thomas Kahle <thomas-kahle@gmx.de>
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/BoijSoederberg.m2
++Copyright: 2015 David Eisenbud <de@msri.org>
++ 2015 Frank Schreyer <schreyer@math.uni-sb.de>
++ 2015 Mike Stillman <mike@math.cornell.edu>
++ 2015 Courtney Gibbons <crgibbon@hamilton.edu>
++ 2015 Branden Stone <bstone@adelphi.edu>
++Comment: See Comment at the top of this file.
++License: GPL-2+ and public-domain
++
++Files: M2/Macaulay2/packages/Book3264Examples.m2
++Copyright: 2010 Charley Crissman <charleyc@math.berkeley.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/BooleanGB.m2
++Copyright: 2011 Franziska Hinkelmann <fhinkel@vt.edu>
++ 2011 Mike Stillman
++ 2011 Elizabeth Arnold
++Comment: See Comment at the top of this file.
++License: GPL-2+ and public-domain
++
++Files: M2/Macaulay2/packages/Bruns.m2
++Copyright: 2008 David Eisenbud <de@msri.org>
++ 2008 Sonja Petrovic
++ 2008 Adam Van Tuyl
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/ChainComplexExtras.m2
++Copyright: 2016 David Eisenbud <de@msri.org>
++ 2016 Frank Moore <fmoore@math.unl.edu>
++ 2016 Frank-Olaf Schreyer <schreyer@math.uni-sb.de>
++ 2016 Greg Smith <ggsmith@mast.queensu.ca>
++ 2016 Lily Silverstein <lsilverstein@cpp.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/CharacteristicClasses.m2
++Copyright: 2015 Martin Helmer <martin.helmer@berkeley.edu>
++ 2015 Christine Jost <christine.e.jost@gmail.com>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/Chordal*
++Copyright: 2017 Diego Cifuentes <diegcif@mit.edu>
++ 2017 Pablo Parrilo <parrilo@mit.edu>
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/CodingTheory.m2
++Copyright: 2021 Taylor Ball <trball13@gmail.com>
++ 2021 Eduardo Camps <camps@esfm.ipn.mx>
++ 2021 Henry Chimal-Dzul <hc118813@ohio.edu>
++ 2021 Delio Jaramillo-Velez <djaramillo@math.cinvestav.mx>
++ 2021 Hiram H. Lopez <h.lopezvaldez@csuohio.edu>
++ 2021 Nathan Nichols <nathannichols454@gmail.com>
++ 2021 Matthew Perkins <m.r.perkins73@vikes.csuohio.edu>
++ 2021 Ivan Soprunov <i.soprunov@csuohio.edu>
++ 2021 German Vera <gveram1100@alumno.ipn.mx>
++ 2021 Gwyn Whieldon <gwyn.whieldon@gmail.com>
++License: GPL-3+
++
++Files: M2/Macaulay2/packages/CoincidentRootLoci*
++Copyright: 2020 Maria Chiara Brambilla <brambilla@dipmat.univpm.it>
++ 2020 Giovanni Staglianò <giovannistagliano@gmail.com>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/Complexes.m2
++Copyright: 2020 Gregory G. Smith <ggsmith@mast.queensu.ca>
++ 2020 Mike Stillman <mike@math.cornell.edu>
++Comment: See Comment at the top of this file.
++License: GPL-2+ and public-domain
++
++Files: M2/Macaulay2/packages/ConformalBlocks.m2
++ M2/Macaulay2/packages/StatePolytope*
++Copyright: 2008, 2018 Dave Swinarski <dswinarski@fordham.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/CorrespondenceScrolls.m2
++Copyright: 2018 David Eisenbud <de@msri.org>
++ 2018 Frank-Olaf Schreyer
++ 2018 Alessio Sammartano
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/Cremona*
++ M2/Macaulay2/packages/MultiprojectiveVarieties.m2
++ M2/Macaulay2/packages/Resultants.m2
++ M2/Macaulay2/packages/SparseResultants.m2
++ M2/Macaulay2/packages/SpecialFanoFourfolds.m2
++Copyright: 2020 Giovanni Staglianò <giovannistagliano@gmail.com>
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/DecomposableSparseSystems*
++Copyright: 2020 Taylor Brysiewicz <taylorbrysiewicz@gmail.com>
++ 2020 Jose Israel Rodriguez <Jose@math.wisc.edu>
++ 2020 Frank Sottile <sottile@math.tamu.edu>
++ 2020 Thomas Yahl <thomasjyahl@tamu.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/Depth.m2
++Copyright: 2010 Bart Snapp <snapp@math.ohio-state.edu>
++ 2016 David Eisenbud <de@msri.org>
++ 2016 Branden Stone <bstone@adelphi.edu>
++License: public-domain
++
++Files: M2/Macaulay2/packages/DeterminantalRepresentations.m2
++Copyright: 2019 Justin Chen <jchen646@gatech.edu>
++ 2019 Papri Dey <papridey@berkeley.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/DGAlgebras.m2
++Copyright: 2017 Frank Moore <moorewf@wfu.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/DiffAlg.m2
++Copyright: 2018 Manuel Dubinsky <manudubinsky@gmail.com>
++ 2018 Cesar Massri <cmassri@caece.edu.ar>
++ 2018 Ariel Molinuevo <amoli@dm.uba.ar>
++ 2018 Federico Quallbrunn <fquallb@dm.uba.ar>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/Divisor.m2
++Copyright: 2018 Karl Schwede <kschwede@gmail.com>
++ 2018 Zhaoning Yang <zyy5054@gmail.com>
++License: public-domain
++
++Files: M2/Macaulay2/packages/Dmodules*
++Copyright: 1999-2009 Anton Leykin <leykin@math.gatech.edu>
++ 1999-2009 Harrison Tsai
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/EdgeIdeals.m2
++Copyright: 2008-2010 Chris Francisco <chris@math.okstate.edu>
++ 2008-2010 Andrew Hoefel <handrew@mathstat.dal.ca>
++ 2008-2010 Adam Van Tuyl <avantuyl@lakeheadu.ca>
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/EliminationMatrices.m2
++Copyright: 2011, 2012 Nicolás Botbol <nbotbol@dm.uba.ar>
++ 2011, 2012 Laurent Busé <Laurent.Buse@inria.fr>
++ 2011, 2012 Manuel Dubinsky <manudubinsky@gmail.com>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/EllipticCurves.m2
++Copyright: 2014 Alessandro Oneto <oneto@math.su.se>
++ 2014 Stefano Marseglia <stefanom@math.su.se>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/EngineTests*
++ M2/Macaulay2/packages/undistributed-packages/CustomEngineTests.m2
++ M2/Macaulay2/packages/undistributed-packages/FastLinearAlgebra*
++Copyright: 2011 Michael E. Stillman <mike@math.cornell.edu>
++ 2011 Jakob Kröker <kroeker@math.uni-hannover.de>
++Comment: See Comment at the top of this file.
++License: GPL-2+ and public-domain
++
++Files: M2/Macaulay2/packages/EnumerationCurves.m2
++Copyright: 2013 Hiep Dang <hiepdt_tt@dlu.edu.vn>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/EquivariantGB*
++Copyright: 2014 Chris Hillar <chillar@msri.org>
++ 2014 Robert Krone <krone@math.gatech.edu>
++ 2014 Anton Leykin <leykin@math.gatech.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/EigenSolver.m2
++Copyright: 2020 Laurent Busé <Laurent.Buse@inria.fr>
++ 2020 Justin Chen <justin.chen@math.gatech.edu>
++ 2020 Kisun Lee <kil004@ucsd.edu>
++ 2020 Anton Leykin <anton.leykin@gmail.com>
++ 2020 Tomas Pajdla <pajdla@cvut.cz>
++ 2020 Erika Pirnes <pirnes@wisc.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/ExampleSystems*
++Copyright: 2020 Anton Leykin <leykin@math.gatech.edu>
++ 2020 Justin Chen <justin.chen@math.gatech.edu>
++ 2020 Kelly Maluccio <kmaluccio@math.tamu.edu>
++ 2020 Leah Gold <L.Gold33@csuohio.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/ExteriorIdeals.m2
++ M2/Macaulay2/packages/ExteriorModules.m2
++Copyright: 2017, 2021 Marilena Crupi <mcrupi@unime.it>
++ 2017, 2021 Luca Amata <lamata@unime.it>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/FastMinors.m2
++Copyright: 2021 Boyana Martinova <u1056124@utah.edu>
++ 2021 Marcus Robinson <robinson@math.utah.edu>
++ 2021 Karl Schwede <schwede@math.utah.edu>
++ 2021 Yuhui (Wei) Yao <yuhuiyao4ever@gmail.com>
++License: public-domain
++
++Files: M2/Macaulay2/packages/FGLM.m2
++Copyright: 2019 Dylan Peifer <djp282@cornell.edu>
++ 2019 Mahrud Sayrafi <mahrud@umn.edu>
++License: GPL-3+
++
++Files: M2/Macaulay2/packages/FiniteFittingIdeals.m2
++Copyright: 2015 Gustav Sædén Ståhl <gss@math.kth.se>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/ForeignFunctions.m2
++ M2/Macaulay2/packages/JSON.m2
++ M2/Macaulay2/packages/Probability.m2
++Copyright: 2022 Doug Torrance <dtorrance@piedmont.edu>
++Comment: See Comment at the top of the file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/FormalGroupLaws.m2
++ M2/Macaulay2/packages/Graphics.m2
++ M2/Macaulay2/packages/WeylGroups*
++Copyright: 2010, 2012 Baptiste Calmès
++ 2010, 2012 Viktor Petrov
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/FourierMotzkin.m2
++Copyright: 1998-2000, 2006, 2008, 2010 Gregory G. Smith <ggsmith@mast.queensu.ca>
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/FourTiTwo.m2
++Copyright: 2008, 2009 Mike Stillman <mike@math.cornell.edu>
++ 2008, 2009 Josephine Yu <jyu@math.mit.edu>
++ 2008, 2009 Sonja Petrovic <petrovic@psu.edu>
++Comment: See Comment at the top of this file.
++License: GPL-2+ and public-domain
++
++Files: M2/Macaulay2/packages/FrobeniusThresholds*
++Copyright: 2019 Juliette Bruce <juliette.bruce@math.wisc.edu>
++ 2019 Daniel Hernández <hernandez@ku.edu>
++ 2019 Karl Schwede <schwede@math.utah.edu>
++ 2019 Dan Smolkin <smolkin@math.utah.edu>
++ 2019 Pedro Teixeira <pteixeir@knox.edu>
++ 2019 Emily Witt <witt@ku.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/FunctionFieldDesingularization.m2
++ M2/Macaulay2/packages/QthPower.m2
++Copyright: 2014, 2021 Douglas A. Leonard <leonada@auburn.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/GenericInitialIdeal.m2
++ M2/Macaulay2/packages/Regularity.m2
++Copyright: 2008, 2009 Alexandra Seceleanu <asecele2@uiuc.edu>
++ 2008, 2009 Nathaniel Stapleton <nstaple2@math.uiuc.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/GeometricDecomposability.m2
++Copyright: 2022 Mike Cummings <cummim5@mcmaster.ca>
++ 2022 Adam Van Tuyl <vantuyl@math.mcmaster.ca>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/gfanInterface.m2
++Copyright: 2012 Mike Stillman <mike@math.cornell.edu>
++ 2012 Andrew Hoefel <andrew.hoefel@gmail.com>
++ 2012 Diane Maclagan <D.Maclagan@warwick.ac.uk>
++ 2012 Josephine Yu
++Comment: See Comment at the top of this file.
++License: GPL-2+ and public-domain
++
++Files: M2/Macaulay2/packages/GKMVarieties*
++Copyright: 2020 Chris Eur <chriseur@stanford.edu>
++ 2020 Ritvik Ramkumar <ritvik@math.berkeley.edu>
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/GradedLieAlgebras*
++Copyright: 2020 Clas Löfwall <clas.lofwall@gmail.com>
++ 2020 Samuel Lundqvist <samuel@math.su.se>
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/GraphicalModels.m2
++Copyright: 2013 Luis Garcia-Puente <lgarcia@shsu.edu>
++ 2013 Sonja Petrovic <sonja@psu.edu>
++ 2013 Mike Stillman <mike@math.cornell.edu>
++ 2013 Seth Sullivant <smsulli2@ncsu.edu>
++ 2013 Alexander Diaz
++ 2013 Shaowei Lin
++ 2013 David Murrugarra
++Comment: See Comment at the top of this file.
++License: GPL-2+ and public-domain
++
++Files: M2/Macaulay2/packages/GraphicalModelsMLE.m2
++Copyright: 2020 Carlos Amendola <carlos.amendola@tum.de>
++ 2020 Luis David Garcia Puente <lgarcia@shsu.edu>
++ 2020 Roser Homs Pons <roser.homs@tum.de>
++ 2020 Olga Kuznetsova <kuznetsova.olga@gmail.com>
++ 2020 Harshit J Motwani <harshitmotwani2015@gmail.com>
++ 2020 Elina Robeva <erobeva@gmail.com>
++ 2020 David Swinarski <dswinarski@fordham.edu>
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/Graphs.m2
++Copyright: 2010 Amelia Taylor <originalbrickhouse@gmail.com>
++ 2010 Augustine O'Keefe <aokeefe@tulane.edu>
++ 2014 Jack Burkart <jburkar1@nd.edu>
++ 2014 David Cook II <dwcook@eiu.edu>
++ 2014 Caroline Jansen <cjansen@nd.edu>
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/GroebnerStrata.m2
++Copyright: 2021 Mike Stillman <mike@math.cornell.edu>
++ 2021 Kristine Jones <kejones84@gmail.com>
++Comment: See Comment at the top of this file.
++License: GPL-2+ and public-domain
++
++Files: M2/Macaulay2/packages/GroebnerWalk.m2
++Copyright: 2017 Dylan Peifer <djp282@cornell.edu>
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/Hadamard.m2
++Copyright: 2020 Iman Bahmani Jafarloo <ibahmani89@gmail.com>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/HodgeIntegrals.m2
++Copyright: 2010 Stephanie Yang <stpyang@math.kth.se>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/HyperplaneArrangements.m2
++Copyright: 2008-2016 Graham Denham
++ 2008-2016 Gregory G. Smith <ggsmith@mast.queensu.ca>
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/IntegralClosure*
++Copyright: 2020 David Eisenbud <de@msri.org>
++ 2020 Mike Stillman <mike@math.cornell.edu>
++ 2020 Amelia Taylor <originalbrickhouse@gmail.com>
++Comment: See Comment at the top of this file.
++License: GPL-2+ and public-domain
++
++Files: M2/Macaulay2/packages/InvariantRing.m2
++Copyright: 2014 Thomas Hawes <thomas.hawes@maths.ox.ac.uk>
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/InverseSystems.m2
++Copyright: 2018 David Eisenbud <de@msri.org>
++ 2018 Mats Boij <boij@kth.se>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/Jets*
++Copyright: 2021 Federico Galetto <galetto.federico@gmail.com>
++ 2021 Nicholas Iammarino <nickiammarino@gmail.com>
++License: GPL-3+
++
++Files: M2/Macaulay2/packages/JSON/test-parse.m2
++Copyright: 2016 Nicolas Seriot
++Comment: tests from JSON Parsing Test Suite
++ https://github.com/nst/JSONTestSuite
++License: Expat
++
++Files: M2/Macaulay2/packages/InvolutiveBases.m2
++Copyright: 2009 Daniel Robertz <daniel@momo.math.rwth-aachen.de>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/K3Carpets.m2
++Copyright: 2018 David Eisenbud <de@msri.org>
++ 2018 Frank-Olaf Schreyer <schreyer@math.uni-sb.de>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/K3Surfaces.m2
++Copyright: 2021 Michael Hoff <hahn@math.uni-sb.de>
++ 2021 Giovanni Staglianò <giovanni.stagliano@unict.it>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/Kronecker.m2
++Copyright: 2010 Edward Carter <edward.carter@gmail.com>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/KustinMiller.m2
++Copyright: 2011 Janko Boehm <boehm@math.uni-sb.de>
++ 2011 Stavros Papadakis <papadak@math.ist.utl.pt>
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/LatticePolytopes.m2
++Copyright: 2015 Anders Lundman <alundman@math.kth.se>
++ 2015 Gustav Sædén Ståhl <gss@math.kth.se>
++License: public-domain
++
++Files: M2/Macaulay2/packages/LexIdeals.m2
++Copyright: 2008 Chris Francisco <chris@math.okstate.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/LieTypes.m2
++Copyright: 2018 Dave Swinarski <dswinarski@fordham.edu>
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/LinearTruncations.m2
++Copyright: 2021 Lauren Cranton Heller <lch@math.berkeley.edu>
++ 2021 David Eisenbud <de@msri.org>
++ 2021 Navid Nemati <Navid.Nemati@inria.fr>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/LocalRings*
++Copyright: 2017 Mahrud Sayrafi <mahrud@berkeley.edu>
++ 2008, 2017 Mike Stillman <mike@math.cornell.edu>
++ 2008 David Eisenbud <de@msri.org>
++Comment: See Comment at the top of this file.
++License: GPL-2+ and public-domain
++
++Files: M2/Macaulay2/packages/M0nbar.m2
++Copyright: 2014 Han-Bom Moon <hmoon8@fordham.edu>
++ 2014 David Swinarski <dswinarski@fordham.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/Macaulay2Doc/doc_lists.m2
++ M2/Macaulay2/packages/Macaulay2Doc/doc_tables.m2
++Copyright: 2018 Daniel R. Grayson
++ 2018 Lily Silverstein
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/Macaulay2Doc/functions/accumulate-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/append-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/commonest-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/compositions-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/deepSplice-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/delete-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/demark-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/drop-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/first-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/flatten-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/fold-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/horizontalJoin-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/insert-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/merge-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/part-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/partitions-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/parts-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/polarize-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/prepend-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/separate-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/substring-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/uniform-doc.m2
++Copyright: 2018 Lily Silverstein
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/Macaulay2Doc/functions/all-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/any-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/apply-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/atan-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/cos-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/hilbertPolynomial-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/hilbertSeries-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/poincare-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/reduceHilbert-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/sin-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/sinh-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/tan-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/tanh-doc.m2
++Copyright: L. Gold
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/Macaulay2Doc/functions/applyKeys-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/applyPairs-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/applyValues-doc.m2
++Copyright: L. Gold, Lily Silverstein
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/Macaulay2Doc/functions/betti-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/koszul-doc.m2
++Copyright: Caviglia, Kummini
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/Macaulay2Doc/functions/binomial-doc.m2
++Copyright: M2Fest2005 DE
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/Macaulay2Doc/functions/char-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/source-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/target-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/transpose-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/groebner.m2
++Copyright: kummini
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/Macaulay2Doc/functions/codim-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/cotangentSheaf-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/dim-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/genera-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/genus-doc.m2
++Copyright: Decker, Popescu
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/Macaulay2Doc/functions/cohomology-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/euler-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/HH-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/tangentSheaf-doc.m2
++Copyright: Sorin Popescu
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/Macaulay2Doc/functions/compress-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/diagonalMatrix-doc.m2
++Copyright: 2005 M2fest
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/Macaulay2Doc/functions/degreesRing-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/hilbertFunction-doc.m2
++Copyright: L. Gold
++ Dan Grayson
++Comment: See Comment at the top of this file.
++License: GPL-2+ and public-domain
++
++Files: M2/Macaulay2/packages/Macaulay2Doc/functions/frac-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/permanents-doc.m2
++Copyright: 2005 M2Fest -- Irena
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/Macaulay2Doc/functions/irreducibleCharacteristicSeries-doc.m2
++Copyright: Decker
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/Macaulay2Doc/functions/intersect-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/regularity-doc.m2
++ M2/Macaulay2/packages/PrimaryDecomposition/doc.m2
++Copyright: Giulio
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/Macaulay2Doc/functions/minors-doc.m2
++Copyright: blasiak, kummini
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/Macaulay2Doc/functions/pdim-doc.m2
++Copyright: L.Gold, Josephine, Jonah
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/Macaulay2Doc/functions/symbol-percent-doc.m2
++Copyright: kummini, MES
++Comment: See Comment at the top of this file.
++License: GPL-2+ and public-domain
++
++Files: M2/Macaulay2/packages/Macaulay2Doc/monomorderings.m2
++Copyright: Irena, Mike
++Comment: See Comment at the top of this file.
++License: GPL-2+ and public-domain
++
++Files: M2/Macaulay2/packages/Markov.m2
++Copyright: Luis Garcia
++ Mike Stillman
++Comment: See Comment at the top of this file.
++License: GPL-2+ and public-domain
++
++Files: M2/Macaulay2/packages/Matroids.m2
++Copyright: 2020 Justin Chen <jchen@math.berkeley.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/MinimalPrimes*
++Copyright: 2014 Frank Moore <moorewf@wfu.ede>
++ 2014 Mike Stillman <mike@math.cornell.edu>
++ 2014 Franziska Hinkelmann
++ 2020 Justin Chen <justin.chen@math.gatech.edu>
++ 2020 Mahrud Sayrafi <mahrud@umn.edu>
++Comment: See Comment at the top of this file.
++License: GPL-2+ and public-domain
++
++Files: M2/Macaulay2/packages/Miura.m2
++Copyright: 2017 Joe Suzuki <j-suzuki@sigmath.es.osaka-u.ac.jp>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/MixedMultiplicity.m2
++Copyright: 2020 Kriti Goel <kritigoel.maths@gmail.com>
++ 2020 Sudeshna Roy <sudeshnaroy@math.iitb.ac.in>
++ 2020 J. K. Verma <jkv@math.iitb.ac.in>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/ModuleDeformations.m2
++Copyright: 2007-2008 Bradford Hovinen <hovinen@math.uni-hannover.de>
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/MonodromySolver*
++Copyright: 2020 Timothy Duff <tduff3@gatech.edu>
++ 2020 Cvetelina Hill <cvetelina.hill@math.gatech.edu>
++ 2020 Anders Nedergaard Jensen <jensen@math.au.dk>
++ 2020 Kisun Lee <klee669@math.gatech.edu>
++ 2020 Anton Leykin <leykin@math.gatech.edu>
++ 2020 Jeff Sommars <sommars1@uic.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/MonomialAlgebras*
++Copyright: 2013 David Eisenbud <de@msri.org>
++ 2013 Janko Boehm <boehm@mathematik.uni-kl.de.
++ 2013 Max Nitsche <nitsche@mis.mpg.de>
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/MonomialIntegerPrograms*
++Copyright: Lily Silverstein <lsilverstein@cpp.edu>
++ Jay White <jay.white@uky.edu>
++License: GPL-3+
++
++Files: M2/Macaulay2/packages/MultiGradedRationalMap.m2
++Copyright: 2018 Yairon Cid Ruiz <ycid@ub.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/MultiplicitySequence.m2
++Copyright: 2020 Justin Chen <justin.chen@math.gatech.edu>
++ 2020 Youngsu Kim <youngsu.kim@csusb.edu>
++ 2020 Jonathan Montaño <jmon@nmsu.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/MultiplierIdeals.m2
++Copyright: 2011-2013 Claudiu Raicu
++ 2011-2013 Bart Snapp
++ 2011-2013 Zach Teitler <zteitler@member.ams.org>
++License: GPL-3+
++
++Files: M2/Macaulay2/packages/MultiplierIdealsDim2.m2
++Copyright: 2015 Ferran Dachs-Cadefau <ferran.dachscadefau@wis.kuleuven.be>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/NAGtypes*
++ M2/Macaulay2/packages/undistributed-packages/NAGtools.m2
++Copyright: 2013 Anton Leykin <leykin@math.gatech.edu>
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/Nauty.m2
++ M2/Macaulay2/packages/NautyGraphs.m2
++ M2/Macaulay2/packages/SimplicialDecomposability.m2
++Copyright: 2010-2013 David W. Cook II <dwcook@eiu.edu>
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/NCAlgebra/*
++ M2/Macaulay2/packages/NCAlgebra.m2
++Copyright: 2016 Frank Moore <moorewf@wfu.edu>
++ 2016 Andrew Conner <abc12@stmarys-ca.edu>
++ 2016 Courtney Gibbons <crgibbon@hamilton.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/NoetherNormalization.m2
++Copyright: 2010 Bart Snap <snapp@math.ohio-state.edu>
++ 2010 Nathaniel Stapleton <nstaple2@math.uiuc.edu>
++License: public-domain
++
++Files: M2/Macaulay2/packages/NoetherianOperators.m2
++Copyright: 2020 Robert Krone <krone@math.gatech.edu>
++ 2020 Justin Chen <justin.chen@math.gatech.edu>
++ 2020 Marc Harkonen <harkonen@gatech.edu>
++ 2020 Yairon Cid-Ruiz <Yairon.CidRuiz@UGent.be>
++ 2020 Anton Leykin <anton.leykin@gmail.com>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/NonminimalComplexes.m2
++ M2/Macaulay2/packages/RandomCanonicalCurves.m2
++ M2/Macaulay2/packages/RandomGenus14Curves.m2
++Copyright: 2011 Frank-Olaf Schreyer <schreyer@math.uni-sb.de>
++ 2011 Hans-Christian Graf v. Bothmer <bothmer@uni-math.gwdg.de>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/Normaliz.m2
++Copyright: 2009, 2010 Winfried Bruns
++ 2009, 2010 Gesa Kaempf <gkaempf@uni-osnabrueck.de>
++ 2011, 2012, 2015, 2016 Christof Soeger <csoeger@uni-osnabrueck.de>
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/NormalToricVarieties*
++ M2/Macaulay2/packages/SpectralSequences.m2
++Copyright: 2009-2020 Gregory G. Smith <ggsmith@mast.queensu.ca>
++License: GPL-3+
++
++Files: M2/Macaulay2/packages/NumericalAlgebraicGeometry*
++Copyright: 2014 Anton Leykin <leykin@math.gatech.edu>
++ 2014 Robert Krone <krone@math.gatech.edu>
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/NumericalCertification*
++Copyright: 2018 Kisun Lee <klee669@gatech.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/NumericalImplicitization.m2
++Copyright: 2019 Justin Chen <jchen646@math.gatech.edu>
++ 2018 Joe Kileel <jkileel@math.princeton.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/NumericalLinearAlgebra.m2
++Copyright: 2020 Robert Krone <krone@math.gatech.edu>
++ 2020 Marc Harkonen <harkonen@gatech.edu>
++ 2020 Anton Leykin <anton.leykin@gmail.com>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/NumericalSchubertCalculus*
++Copyright: 2017 Anton Leykin <leykin@math.gatech.edu>
++ 2017 Abraham Martin del Campo <abraham.mc@cimat.mx>
++ 2017 Frank Sottile <sottile@math.tamu.edu>
++ 2017 Jan Verschelde <jan@math.uic.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/NumericSolutions.m2
++Copyright: 2017 Laura Menini <menini@disp.uniroma2.it>
++ 2017 Corrado Possieri <possieri@ing.uniroma2.it>
++ 2017 Antonio Tornambe <tornambe@disp.uniroma2.it>
++License: GPL-3+
++
++Files: M2/Macaulay2/packages/OldPolyhedra.m2
++Copyright: 2010 René Birkner <rbirkner@mi.fu-berlin.de>
++License: GPL-3+
++
++Files: M2/Macaulay2/packages/OldToricVectorBundles.m2
++ M2/Macaulay2/packages/ToricVectorBundles.m2
++Copyright: 2010 René Birkner <rbirkner@math.fu-berlin.de>
++ 2010 Nathan Owen Ilten <nilten@cs.uchicago.edu>
++ 2010 Lars Petersen <petersen@math.fu-berlin.de>
++License: GPL-3+
++
++Files: M2/Macaulay2/packages/OpenMath*
++ M2/Macaulay2/packages/SCSCP*
++Copyright: 2009 Dan Roozemond (TU Eindhoven, Netherlands)
++ <dan.roozemond@gmail.com>
++License: Apache-2.0
++
++Files: M2/Macaulay2/packages/PackageCitations.m2
++Copyright: 2017 Aaron Dall <aaronmdall@gmail.com>
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/PencilsOfQuadrics.m2
++Copyright: 2020 Frank-Olaf Schreyer <schreyer@math.uni-sb.de>
++ 2020 David Eisenbud <de@msri.org>
++ 2020 Yeongrak Kim <kim@math.uni-sb.de>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/Permanents.m2
++Copyright: 2014 Tair Akhmejanov ta328@cornell.edu
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/PHCpack.m2
++Copyright: 2013 Elizabeth Gross <egross7@uic.edu>
++ 2013 Sonja Petrovic <Sonja.Petrovic@iit.edu>
++ 2013 Jan Verschelde <jan@math.uic.edu>
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/PhylogeneticTrees.m2
++Copyright: 2016 Hector Banos <hdbanoscervantes@alaksa.edu>
++ 2016 Nathaniel Bushek <nbushek@alaska.edu>
++ 2016 Ruth Davidson <ruth.davidson.math@gmail.com>
++ 2016 Elizabeth Gross <elizabeth.gross@sjsu.edu>
++ 2016 Pamela Harris <peh2@williams.edu>
++ 2016 Robert Krone <rckrone@gmail.com>
++ 2016 Colby Long <celong2@ncsu.edu>
++ 2016 AJ Stewart <stewaral@seattleu.edu>
++ 2016 Robert Walker <robmarsw@umich.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/PieriMaps.m2
++Copyright: 2008, 2009 Steven V Sam <ssam@math.mit.edu>
++License: GPL-3+
++
++Files: M2/Macaulay2/packages/Points.m2
++Copyright: 2008 Mike Stillman <mike@math.cornell.edu>
++ 2008 Gregory G. Smith <ggsmith@mast.queensu.ca>
++ 2008 Stein A. Strømme <stromme@math.uib.no>
++ 2016 David Eisenbud <de@msri.org>
++ 2018 Federico Galetto <galetto.federico@gmail.com>
++ 2018 Joseph W. Skelton <jskelton@tulane.edu>
++Comment: See Comment at the top of this file.
++License: GPL-2+ and public-domain
++
++Files: M2/Macaulay2/packages/Polyhedra*
++Copyright: 2010 René Birkner <rbirkner@mi.fu-berlin.de>
++License: GPL-3+
++
++Files: M2/Macaulay2/packages/Polymake.m2
++Copyright: 2008 Josephine Yu jyu@math.mit.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/Posets.m2
++Copyright: 2011-2014 David Cook II <dwcook@eiu.edu>
++ 2011-2014 Sonja Mapes <smapes1@nd.edu>
++ 2011-2014 Gwyn Whieldon <whieldon@hood.edu>
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/PositivityToricBundles.m2
++Copyright: 2020 Andreas Hochenegger <andreas.hochenegger@sns.it>
++License: GPL-3+
++
++Files: M2/Macaulay2/packages/PseudomonomialPrimaryDecomposition.m2
++Copyright: 2022 Alan A. Veliz-Cuba <avelizcuba1@udayton.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/Pullback.m2
++Copyright: 2018 Drew Ellingson
++ 2018 Karl Schwede
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/PushForward.m2
++Copyright: 2015 Claudiu Raicu <craicu@nd.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/Python.m2
++Copyright: 2021 Daniel R. Grayson <danielrichardgrayson@gmail.com>
++ 2021 Doug Torrance <dtorrance@piedmont.edu>
++Comment: See Comment at the top of this file.
++License: GPL-2+ and public-domain
++
++Files: M2/Macaulay2/packages/Quasidegrees.m2
++Copyright: 2015 Roberto Barrera <rbarrera@math.tamu.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/QuaternaryQuartics*
++Copyright: 2021 Gregorz Kapustka
++ 2021 Michal Kapustka
++ 2021 Kristian Ranestad
++ 2021 Hal Schenck
++ 2021 Mike Stillman <mike@math.cornell.edu>
++ 2021 Beihui Yuan
++Comment: See Comment at the top of this file.
++License: GPL-2+ and public-domain
++
++Files: M2/Macaulay2/packages/QuillenSuslin.m2
++Copyright: 2013 Brett Barwick <bbarwick@uscupstate.edu>
++ 2013 Branden Stone <bstone@bard.edu>
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/RandomComplexes.m2
++ M2/Macaulay2/packages/SVDComplexes.m2
++Copyright: 2018 Frank Schreyer <schreyer@math.uni-sb.de>
++ 2018 Michael E. Stillman <mike@math.cornell.edu>
++Comment: See Comment at the top of this file.
++License: GPL-2+ and public-domain
++
++Files: M2/Macaulay2/packages/RandomCurves.m2
++ M2/Macaulay2/packages/RandomPlaneCurves.m2
++ M2/Macaulay2/packages/RandomSpaceCurves.m2
++Copyright: 2011 Frank-Olaf Schreyer <schreyer@math.uni-sb.de>
++ 2011 Hans-Christian Graf v. Bothmer <bothmer@uni-math.gwdg.de>
++ 2011 Florian Geiss <fg@math.uni-sb.de>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/RandomCurvesOverVerySmallFiniteFields.m2
++Copyright: 2018 Christian Bopp <bopp@math.uni-sb.de>
++ 2011 Frank-Olaf Schreyer <schreyer@math.uni-sb.de>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/RandomIdeals.m2
++ M2/Macaulay2/packages/ResidualIntersections.m2
++Copyright: 2016 Katie Ansaldi <kansaldi@gmail.com>
++ 2016 David Eisenbud <de@msri.org>
++ 2016 Robert Krone <rckrone@gmail.com>
++ 2016 Jay Yang <jkelleyy@gmail.com>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/RandomMonomialIdeals.m2
++Copyright: 2019 Sonja Petrovic <sonja.petrovic@iit.edu>
++ 2019 Despina Stasi <stasdes@iit.edu>
++ 2019 Dane Wilburne <dwilburn@hawk.iit.edu>
++ 2019 Tanner Zielinski <tzielin1@hawk.iit.edu>
++ 2019 Daniel Kosmas <dkosmas@hawk.iit.edu>
++ 2019 Parker Joncus <pjoncus@hawk.iit.edu>
++ 2019 Richard Osborn <rosborn@hawk.iit.edu>
++ 2019 Monica Yun <myun1@hawk.iit.edu>
++ 2019 Genevieve Hummel <ghummel1@hawk.iit.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/RandomObjects.m2
++Copyright: 2011 Hans-Christian Graf v. Bothmer <bothmer@uni-math.gwdg.de>
++ 2011 Florian Geiss <fg@math.uni-sb.de>
++ 2011 Daniel R. Grayson <dan@math.uiuc.edu>
++ 2011 Frank-Olaf Schreyer <schreyer@math.uni-sb.de>
++Comment: See Comment at the top of this file.
++License: GPL-2+ and public-domain
++
++Files: M2/Macaulay2/packages/RandomPoints.m2
++Copyright: 2021 Sankhaneel Bisui <sbisu@tulane.edu>
++ 2021 Thai Nguyen <tnguyen11@tulane.edu>
++ 2021 Karl Schwede <schwede@math.utah.edu>
++ 2021 Sarasij Maitra <sm3vg@virginia.edu>
++ 2021 Zhan Jiang <zoeng@umich.edu>
++ 2021 Frank-Olaf Schreyer <schreyer@math.uni-sb.de>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/RationalMaps.m2
++Copyright: 2019 Karl Schwede <kschwede@gmail.com>
++ 2019 Daniel Smolkin <smolkin@math.utah.edu>
++ 2019 S. Hamid Hassanzadeh <hassanzadeh.ufrj@gmail.com>
++ 2019 C.J. Bott <cjamesbott@gmail.com>
++License: public-domain
++
++Files: M2/Macaulay2/packages/RationalPoints.m2
++Copyright: 2009 Nathaniel Stapleton <nat.j.stapleton@gmail.com>
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/RationalPoints2.m2
++Copyright: 2021 Jieao Song <jieao.song@imj-prg.fr>
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/ReactionNetworks*
++Copyright: 2016 Cvetelina Hill <cvetelina.hill@math.gatech.edu>
++ 2016 Timothy Duff <timothy.duff@ncf.edu>
++ 2016 Kisun Lee <klee669@math.gatech.edu>
++ 2016 Anton Leykin <leykin@math.gatech.edu>
++ 2018 Alexandru Iosif <alexandru.iosif@ovgu.de>
++ 2018 Michael Adamer <adamer@maths.ox.ac.uk>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/RealRoots.m2
++Copyright: 2020 Jordy Lopez <jordy.lopez@tamu.edu>
++ 2020 Kelly Maluccio <kmaluccio@tamu.edu>
++ 2020 Frank Sottile <sottile@tamu.edu>
++ 2020 Thomas Yahl <Thomasjyahl@tamu.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/ReesAlgebra.m2
++Copyright: 2006, 2008, 2017, 2019 David Eisenbud <de@msri.org>
++ 2006, 2008, 2017, 2019 Amelia Taylor <originalbrickhouse@gmail.com>
++ 2006, 2008, 2017, 2019 Sorin Popescu <sorin@math.sunysb.edu>
++ 2006, 2008, 2017, 2019 Michael E. Stillman <mike@math.cornell.edu>
++Comment: See Comment at the top of this file.
++License: GPL-2+ and public-domain
++
++Files: M2/Macaulay2/packages/RelativeCanonicalResolution.m2
++Copyright: 2020 Christian Bopp <bopp@math.uni-sb.de>
++ 2020 Michael Hoff <hahn@math.uni-sb.de>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/ResLengthThree.m2
++Copyright: 2020 Lars Winther Christensen <lars.w.christensen@ttu.edu>
++ 2020 Luigi Ferraro <lferraro@ttu.edu>
++ 2020 Francesca Gandini <fra.gandi.phd@gmail.com>
++ 2020 Frank Moore <moorewf@wfu.edu>
++ 2020 Oana Veliche <o.veliche@northeastern.edu>
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/ResolutionsOfStanleyReisnerRings.m2
++Copyright: 2020 Ashleigh Adams <adams869@umn.edu>
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/RunExternalM2.m2
++ M2/Macaulay2/packages/VectorFields.m2
++Copyright: 2016 Brian Pike <bapike@gmail.com>
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/Saturation*
++Copyright: 2020 Justin Chen <justin.chen@math.gatech.edu>
++ 2020 Mahrud Sayrafi <mahrud@umn.edu>
++ 2020 Mike Stillman <mike@math.cornell.edu>
++Comment: See Comment at the top of this file.
++License: GPL-2+ and public-domain
++
++Files: M2/Macaulay2/packages/Schubert2*
++Copyright: 2013 Daniel R. Grayson <dan@math.uiuc.edu>
++ 2013 Michael E. Stillman <mike@math.cornell.edu>
++ 2013 Stein A. Strømme <stromme@math.uib.no>
++ 2013 David Eisenbud <de@msri.org>
++ 2013 Charley Crissman <charleyc@math.berkeley.edu>
++Comment: See Comment at the top of this file.
++License: GPL-2+ and public-domain
++
++Files: M2/Macaulay2/packages/SchurComplexes.m2
++Copyright: 2019 Michael K. Brown <mkbrown5@wisc.edu>
++ 2019 Amy Huang <hhuang235@math.wisc.edu>
++ 2019 Robert Laudone <robert.laudone@gmail.com>
++ 2019 Michael Perlman <mperlman@nd.edu>
++ 2019 Claudiu Raicu <craicu@nd.edu>
++ 2019 Steven V. Sam <ssam@sd.edu>
++ 2019 Joao Pedro Santos <jsantos3@nd.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/SchurFunctors*
++Copyright: 2008 Michael E. Stillman <mike@math.cornell.edu>
++ 2008 Anton Leykin
++ 2008 Mauricio Velasco
++Comment: See Comment at the top of this file.
++License: GPL-2+ and public-domain
++
++Files: M2/Macaulay2/packages/SchurRings.m2
++Copyright: 2007, 2011 Michael Stillman <mike@math.cornell.edu>
++License: GPL-3+
++
++Files: M2/Macaulay2/packages/SchurVeronese*
++Copyright: 2019 Juliette Bruce <jebruce2@wisc.edu>
++ 2019 Daniel Erman <derman@math.wisc.edu>
++ 2019 Steve Goldstein <sgoldstein@wisc.edu>
++ 2019 Jay Yang <jkyang@umn.edu>
++License: GPL-3+
++
++Files: M2/Macaulay2/packages/SectionRing.m2
++Copyright: 2016 Andrew Bydlon <thelongdivider@gmail.com>
++License: public-domain
++
++Files: M2/Macaulay2/packages/SegreClasses.m2
++Copyright: 2018 Martin Helmer <m.helmer@math.ku.dk>
++ 2018 Corey Harris <Corey.Harris@mis.mpg.de>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/SemidefiniteProgramming*
++ M2/Macaulay2/packages/SumsOfSquares*
++Copyright: 2018, 2019 Diego Cifuentes <diegcif@mit.edu>
++ 2018, 2019 Thomas Kahle <thomas.kahle@ovgu.de>
++ 2018, 2019 Pablo A. Parrilo <parrilo@mit.edu>
++ 2018, 2019 Helfried Peyrl <peyrl@control.ee.ethz.ch>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/Seminormalization.m2
++Copyright: 2019 Karl Schwede <schwede@math.utah.edu>
++ 2019 Bernard Serbinowski <bserbinowski@gmail.com>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/SimpleDoc*
++Copyright: 2020 Daniel R. Grayson <dan@math.uiuc.edu>
++ 2020 Mike Stillman <mike@math.cornell.edu>
++ 2020 Mahrud Sayrafi <mahrud@umn.edu>
++Comment: See Comment at the top of this file.
++License: GPL-2+ and public-domain
++
++Files: M2/Macaulay2/packages/SimplicialComplexes.m2
++Copyright: 2006, 2010 Sorin Popescu <sorin@math.sunysb.edu>
++ 2006, 2010 Gregory G. Smith <ggsmith@mast.queensu.ca>
++ 2006, 2010 Mike Stillman <mike@math.cornell.edu>
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/SimplicialPosets.m2
++Copyright: 2019 Nathan Nichols <nicho997@umn.edu>
++License: GPL-3+
++
++Files: M2/Macaulay2/packages/SlackIdeals.m2
++Copyright: 2020 Amy Wiebe <w.amy.math@gmail.com>
++ 2020 Antonio Macchia <macchia.antonello@gmail.com>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/SLnEquivariantMatrices.m2
++Copyright: 2017-2018 Paolo Lella <paolo.lella@polimi.it>
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/SLPexpressions*
++Copyright: 2019 Anton Leykin <leykin@math.gatech.edu>
++ 2019 Timothy Duff <tduff3@gatech.edu>
++ 2019 Justin Chen <jchen646@math.gatech.edu>
++ 2019 Mike Stillman <mike@math.cornell.edu>
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/SpaceCurves.m2
++Copyright: 2018 Frank Schreyer <schreyer@math.uni-sb.de>
++ 2018 Mike Stillman <mike@math.cornell.edu>
++ 2018 Mengyuan Zhang <myzhang@berkeley.edu>
++Comment: See Comment at the top of this file.
++License: GPL-2+ and public-domain
++
++Files: M2/Macaulay2/packages/SpechtModule.m2
++Copyright: 2019 Jonathan Niño <ja.nino937@uniandes.edu.co>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/StatGraphs.m2
++Copyright: 2020 Carlos Amendola <carlos.amendola@tum.de>
++ 2020 Luis David Garcia Puente <lgarcia@shsu.edu>
++ 2020 Roser Homs Pons <roser.homs@tum.de>
++ 2020 Olga Kuznetsova <kuznetsova.olga@gmail.com>
++ 2020 Harshit J Motwani <harshitmotwani2015@gmail.com>
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/StronglyStableIdeals.m2
++Copyright: 2018 Davide Alberelli <davide.alberelli@gmail.com>
++ 2018 Paolo Lella <paolo.lella@polimi.it>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/SuperLinearAlgebra.m2
++Copyright: 2021 Fereshteh Bahadorykhalily <f.bahadori.khalili@gmail.com>
++ 2021 Fatemeh Tarashi Kashani <tarashikashanifatemeh@gmail.com>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/SwitchingFields.m2
++Copyright: 2020 Zhan Jiang <zoeng@umich.edu>
++ 2020 Sarasij Maitra <sm3vg@virginia.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/SymbolicPowers.m2
++Copyright: 2019 Eloisa Grifo <grifo@umich.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/SymmetricPolynomials.m2
++ M2/Macaulay2/packages/undistributed-packages/ToricCohomology.m2
++Copyright: 2009 Alexandra Seceleanu
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/TangentCone.m2
++Copyright: 2006 Craig Huneke <huneke@math.ku.edu>
++ 2006 David Eisenbud <de@msri.org>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/TateOnProducts.m2
++Copyright: 2020 Daniel Erman <derman@math.wisc.edu>
++ 2020 David Eisenbud <de@msri.org>
++ 2020 Frank-Olaf Schreyer <schreyer@math.uni-sb.de>
++ 2020 Michael E. Stillman <mike@math.cornell.edu>
++ 2020 Yeongrak Kim <kim@math.uni-sb.de>
++Comment: See Comment at the top of this file.
++License: GPL-2+ and public-domain
++
++Files: M2/Macaulay2/packages/TensorComplexes.m2
++Copyright: 2011 David Eisenbud <de@msri.org>
++ 2011 Daniel Erman <derman@math.stanford.edu>
++ 2011 Gregory G. Smith <ggsmith@mast.queensu.ca>
++ 2011 Dumitru Stamate <dumitru.stamate@fmi.unibuc.ro>
++License: GPL-3+
++
++Files: M2/Macaulay2/packages/TestIdeals*
++Copyright: 2019 Erin Bela <ebela@nd.edu>
++ 2019 Alberto F. Boix <albertof.boix@gmail.com>
++ 2019 Juliette Bruce <juliette.bruce@math.wisc.edu>
++ 2019 Drew Ellingson <drewtell@umich.edu>
++ 2019 Daniel Hernandez <hernandez@ku.edu>
++ 2019 Zhibek Kadyrsizova <zhikadyr@umich.edu>
++ 2019 Mordechai Katzman <m.katzman@sheffield.ac.uk>
++ 2019 Sara Malec <malec@hood.edu>
++ 2019 Matthew Mastroeni <mmastro@okstate.edu>
++ 2019 Maral Mostafazadehfard <maralmostafazadehfard@gmail.com>
++ 2019 Marcus Robinson <robinson@math.utah.edu>
++ 2019 Karl Schwede <schwede@math.utah.edu>
++ 2019 Dan Smolkin <smolkin@math.utah.edu>
++ 2019 Pedro Teixeira <pteixeir@knox.edu>
++ 2019 Emily Witt <witt@ku.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/ThinSincereQuivers.m2
++Copyright: 2019 Mary Barker <marybarker@wustl.edu>
++ 2019 Patricio Gallardo <pgallard@ucr.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/ThreadedGB.m2
++Copyright: 2020 Sonja Petrovic <sonja.petrovic@iit.edu>
++ 2020 Sara Jamshidi Zelenberg <szelenberg@mx.lakeforest.edu>
++ 2020 Tanner Zielinski <tzielin1@hawk.iit.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/TorAlgebra.m2
++Copyright: 2018 Lars Winther Christensen <lars.w.christensen@ttu.edu>
++ 2018 Oana Veliche <o.veliche@northeastern.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/ToricInvariants.m2
++ M2/Macaulay2/packages/WhitneyStratifications.m2
++Copyright: 2018, 2022 Martin Helmer <mhelmer@ncsu.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/ToricTopology.m2
++Copyright: 2015 Alvise Trevisan <a.trevisan@enpicom.com>
++ 2015 Alexander I. Suciu <a.suciu@neu.edu>
++License: GPL-3+
++
++Files: M2/Macaulay2/packages/TriangularSets*
++Copyright: 2017 Diego Cifuentes <diegcif@mit.edu>
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/Triplets.m2
++Copyright: 2013 Gunnar Floystad <nmagf@uib.no>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/Tropical*
++Copyright: 2019 Carlos Amendola <carlos.amendola@tum.de>
++ 2019 Kathlen Kohn <kathlen.korn@gmail.com>
++ 2019 Sara Lamboglia <lamboglia@math.uni-frankfurt.de>
++ 2019 Diane Maclagan <D.Maclagan@warwick.ac.uk>
++ 2019 Benjamin Smith <benjamin.smith@qmul.ac.uk>
++ 2019 Jeff Sommars <sommars1@uic.edu>
++ 2019 Paolo Tripoli <paolo.tripoli@nottingham.ac.uk>
++ 2019 Magdalena Zajaczkowska <Magdalena.A.Zajaczkowska@gmail.com>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/TSpreadIdeals.m2
++Copyright: 2021 Luca Amata <lamata@unime.it>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/undistributed-packages/FrobeniusMultiplicities.m2
++ M2/Macaulay2/packages/undistributed-packages/Functoriality.m2
++Copyright: 2009 Jason G McCullough <jmccullo@math.ucr.edu>
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/undistributed-packages/Polyhedra2.m2
++ M2/Macaulay2/packages/undistributed-packages/PolyhedralObjects.m2
++Copyright: 2012 Nathan Ilten <nilten@math.berkeley.edu>
++ 2012 Josephine Yu
++ 2012 Qingchun Ren
++ 2010 Rene Birker
++License: GPL-3+
++
++Files: M2/Macaulay2/packages/undistributed-packages/PolymakeInterface.m2
++Copyright: 2012 Josephine Yu <josephine.yu@math.gatech.edu>
++ 2012 Nathan Ilten <nilten@math.berkeley.edu>
++ 2012 Qingchun Ren <qingchun.ren@gmail.com>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/SubalgebraBases*
++Copyright: 2021 Michael Burr <burr2@clemson.edu>
++ 2021 Oliver Clarke <oc17371@bristol.ac.uk>
++ 2021 Timothy Duff <tduff3@gatech.edu>
++ 2021 Jackson Leaman
++ 2021 Nathan Nichols <nathannichols454@gmail.com>
++ 2021 Elise Walker <elise.walker@tamu.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/SubalgebraBases/Old-SubalgebraBases/SubalgebraBases/sagbieng.m2
++ M2/Macaulay2/packages/SubalgebraBases/Old-SubalgebraBases/SubalgebraBases/sagbitop.m2
++Copyright: 1997 Mike Stillman <mike@math.cornell.edu>
++ 1997 Harry Tsai
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/VersalDeformations.m2
++Copyright: 2020 Nathan Owen Ilten <nilten@math.berkeley.edu>
++License: GPL-3+
++
++Files: M2/Macaulay2/packages/VirtualResolutions*
++Copyright: 2018-2020 Ayah Almousa <aka66@cornell.edu>
++ 2018-2020 Christine Berkesch <cberkesc@umn.edu>
++ 2018-2020 Juliette Bruce <jebruce2@wisc.edu>
++ 2018-2020 David Eisenbud <de@msri.org>
++ 2018-2020 Michael Loper <loper012@umn.edu>
++ 2018-2020 Mahrud Sayrafi <mahrud@umn.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/packages/Visualize*
++Copyright: 2017 Brett Barwick <bbarwick@uscupstate.edu>
++ 2017 Thomas Enkosky <tomenk@bu.edu>
++ 2017 Branden Stone <bstone@adelphi.edu>
++ 2017 Jim Vallandingham <vlandham@gmail.com>
++License: GPL-2+
++
++Files: M2/Macaulay2/packages/PrimaryDecomposition/associatedPrimes-test.m2
++Copyright: 2002 Jessica Sidman
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/tests/normal/CSM.test.m2
++Copyright: 2002 Paolo Aluffi
++License: freely-used-if-properly-acknowledged
++ This code can be freely used, provided use is properly acknowledged
++
++Files: M2/Macaulay2/tests/normal/ext2.m2
++Copyright: Ezra Miller <enmiller@math.berkeley.edu>
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/tests/normal/ext3.m2
++Copyright: Hal Schenck
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/tests/normal/groupcoh.m2
++Copyright: Sarah Wasserman
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/tests/normal/monideal2.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/det-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/genericMatrix-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/genericSkewMatrix-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/genericSymmetricMatrix-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/ideal-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/isAffineRing-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/isCommutative-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/isField-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/isFreeModule-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/isIdeal-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/isModule-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/isMonomialIdeal-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/isPolynomialRing-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/isPrime-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/isQuotientModule-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/isQuotientRing-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/isRing-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/isSquareFree-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/isSubmodule-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/isUnit-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/standardPairs-doc.m2
++ M2/Macaulay2/packages/Macaulay2Doc/functions/vars-doc.m2
++Copyright: Gregory G. Smith
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/tests/normal/schreyer.m2
++Copyright: Frank Schreyer
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/Macaulay2/tests/rationality/*.m2
++Copyright: Christian Boehning
++ Hans-Christian Graf v. Bothmer
++Comment: See Comment at the top of this file.
++License: public-domain
++
++Files: M2/usr-build/pkg.m4
++Copyright: 2004 Scott James Remnant <scott@netsplit.com>.
++ 2012-2015 Dan Nicholson <dbn.lists@gmail.com>
++License: GPL-2+ with autoconf exception
++
++Files: M2/util/validator-runner.py
++Copyright: 2020 Janus Troelsen
++License: 0BSD
++Comment: https://github.com/ysangkok/w3c-validator-runner/blob/master/LICENSE
++
++License: 0BSD
++ Permission to use, copy, modify, and/or distribute this software for any
++ purpose with or without fee is hereby granted.
++ .
++ THE SOFTWARE IS PROVIDED "AS IS" AND THE AUTHOR DISCLAIMS ALL WARRANTIES WITH
++ REGARD TO THIS SOFTWARE INCLUDING ALL IMPLIED WARRANTIES OF MERCHANTABILITY
++ AND FITNESS. IN NO EVENT SHALL THE AUTHOR BE LIABLE FOR ANY SPECIAL, DIRECT,
++ INDIRECT, OR CONSEQUENTIAL DAMAGES OR ANY DAMAGES WHATSOEVER RESULTING FROM
++ LOSS OF USE, DATA OR PROFITS, WHETHER IN AN ACTION OF CONTRACT, NEGLIGENCE OR
++ OTHER TORTIOUS ACTION, ARISING OUT OF OR IN CONNECTION WITH THE USE OR
++ PERFORMANCE OF THIS SOFTWARE.
++
++License: BSD-2-clause
++ Redistribution and use in source and binary forms, with or without
++ modification, are permitted provided that the following conditions
++ are met:
++ .
++ 1. Redistributions of source code must retain the above copyright
++ notice, this list of conditions and the following disclaimer.
++ 2. Redistributions in binary form must reproduce the above copyright
++ notice, this list of conditions and the following disclaimer in the
++ documentation and/or other materials provided with the distribution.
++ .
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++License: BSD-3-clause
++ Redistribution and use in source and binary forms, with or without
++ modification, are permitted provided that the following conditions are
++ met:
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++ 1. Redistributions of source code must retain the above copyright
++ notice, this list of conditions and the following disclaimer.
++ 2. Redistributions in binary form must reproduce the above copyright
++ notice, this list of conditions and the following disclaimer in the
++ documentation and/or other materials provided with the distribution.
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++ LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY
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++License: CECILL-B
++ CeCILL-B FREE SOFTWARE LICENSE AGREEMENT
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++ state-of-the-art when the Software was distributed did not enable all
++ possible uses to be tested and verified, nor for the presence of
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++ Article 10 - TERMINATION
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++ Article 11 - MISCELLANEOUS
++ .
++ 11.1 EXCUSABLE EVENTS
++ .
++ Neither Party shall be liable for any or all delay, or failure to
++ perform the Agreement, that may be attributable to an event of force
++ majeure, an act of God or an outside cause, such as defective
++ functioning or interruptions of the electricity or telecommunications
++ networks, network paralysis following a virus attack, intervention by
++ government authorities, natural disasters, water damage, earthquakes,
++ fire, explosions, strikes and labor unrest, war, etc.
++ .
++ 11.2 Any failure by either Party, on one or more occasions, to invoke
++ one or more of the provisions hereof, shall under no circumstances be
++ interpreted as being a waiver by the interested Party of its right to
++ invoke said provision(s) subsequently.
++ .
++ 11.3 The Agreement cancels and replaces any or all previous agreements,
++ whether written or oral, between the Parties and having the same
++ purpose, and constitutes the entirety of the agreement between said
++ Parties concerning said purpose. No supplement or modification to the
++ terms and conditions hereof shall be effective as between the Parties
++ unless it is made in writing and signed by their duly authorized
++ representatives.
++ .
++ 11.4 In the event that one or more of the provisions hereof were to
++ conflict with a current or future applicable act or legislative text,
++ said act or legislative text shall prevail, and the Parties shall make
++ the necessary amendments so as to comply with said act or legislative
++ text. All other provisions shall remain effective. Similarly, invalidity
++ of a provision of the Agreement, for any reason whatsoever, shall not
++ cause the Agreement as a whole to be invalid.
++ .
++ 11.5 LANGUAGE
++ .
++ The Agreement is drafted in both French and English and both versions
++ are deemed authentic.
++ .
++ Article 12 - NEW VERSIONS OF THE AGREEMENT
++ .
++ 12.1 Any person is authorized to duplicate and distribute copies of this
++ Agreement.
++ .
++ 12.2 So as to ensure coherence, the wording of this Agreement is
++ protected and may only be modified by the authors of the License, who
++ reserve the right to periodically publish updates or new versions of the
++ Agreement, each with a separate number. These subsequent versions may
++ address new issues encountered by Free Software.
++ .
++ 12.3 Any Software distributed under a given version of the Agreement may
++ only be subsequently distributed under the same version of the Agreement
++ or a subsequent version.
++ .
++ Article 13 - GOVERNING LAW AND JURISDICTION
++ .
++ 13.1 The Agreement is governed by French law. The Parties agree to
++ endeavor to seek an amicable solution to any disagreements or disputes
++ that may arise during the performance of the Agreement.
++ .
++ 13.2 Failing an amicable solution within two (2) months as from their
++ occurrence, and unless emergency proceedings are necessary, the
++ disagreements or disputes shall be referred to the Paris Courts having
++ jurisdiction, by the more diligent Party.
++ .
++ Version 1.0 dated 2006-09-05.
++
++License: Expat
++ Permission is hereby granted, free of charge, to any person obtaining
++ a copy of this software and associated documentation files (the
++ "Software"), to deal in the Software without restriction, including
++ without limitation the rights to use, copy, modify, merge, publish,
++ distribute, sublicense, and/or sell copies of the Software, and to
++ permit persons to whom the Software is furnished to do so, subject to
++ the following conditions:
++ .
++ The above copyright notice and this permission notice shall be included
++ in all copies or substantial portions of the Software.
++ .
++ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
++ EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
++ MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT.
++ IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY
++ CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT,
++ TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE
++ SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
++
++License: FSFAP
++ Copying and distribution of this file, with or without modification,
++ are permitted in any medium without royalty provided the copyright
++ notice and this notice are preserved. This file is offered as-is,
++ without any warranty.
++
++License: GPL-2+
++ This package is free software; you can redistribute it and/or modify
++ it under the terms of the GNU General Public License as published by
++ the Free Software Foundation; either version 2 of the License, or
++ (at your option) any later version.
++ .
++ This package is distributed in the hope that it will be useful,
++ but WITHOUT ANY WARRANTY; without even the implied warranty of
++ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
++ GNU General Public License for more details.
++ .
++ You should have received a copy of the GNU General Public License
++ along with this program. If not, see <http://www.gnu.org/licenses/>
++ .
++ On Debian systems, the complete text of the GNU General
++ Public License version 2 can be found in "/usr/share/common-licenses/GPL-2".
++
++License: GPL-2+ with autoconf exception
++ This package is free software; you can redistribute it and/or modify
++ it under the terms of the GNU General Public License as published by
++ the Free Software Foundation; either version 2 of the License, or
++ (at your option) any later version.
++ .
++ This package is distributed in the hope that it will be useful,
++ but WITHOUT ANY WARRANTY; without even the implied warranty of
++ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
++ GNU General Public License for more details.
++ .
++ You should have received a copy of the GNU General Public License
++ along with this program. If not, see <http://www.gnu.org/licenses/>
++ .
++ As a special exception, the respective Autoconf Macro's copyright owner
++ gives unlimited permission to copy, distribute and modify the configure
++ scripts that are the output of Autoconf when processing the Macro. You
++ need not follow the terms of the GNU General Public License when using
++ or distributing such scripts, even though portions of the text of the
++ Macro appear in them. The GNU General Public License (GPL) does govern
++ all other use of the material that constitutes the Autoconf Macro.
++ .
++ This special exception to the GPL applies to versions of the Autoconf
++ Macro released by the Autoconf Archive. When you make and distribute a
++ modified version of the Autoconf Macro, you may extend this special
++ exception to the GPL to apply to your modified version as well.
++ .
++ On Debian systems, the complete text of the GNU General
++ Public License version 2 can be found in "/usr/share/common-licenses/GPL-2".
++
++License: GPL-3+
++ This program is free software: you can redistribute it and/or modify
++ it under the terms of the GNU General Public License as published by
++ the Free Software Foundation, either version 3 of the License, or
++ (at your option) any later version.
++ .
++ This program is distributed in the hope that it will be useful,
++ but WITHOUT ANY WARRANTY; without even the implied warranty of
++ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
++ GNU General Public License for more details.
++ .
++ You should have received a copy of the GNU General Public License
++ along with this program. If not, see <http://www.gnu.org/licenses/>.
++ .
++ On Debian systems, the complete text of the GNU General
++ Public License version 3 can be found in "/usr/share/common-licenses/GPL-3".
++
++License: LGPL-3.0+
++ This package is free software; you can redistribute it and/or
++ modify it under the terms of the GNU Lesser General Public
++ License as published by the Free Software Foundation; either
++ version 3 of the License, or (at your option) any later version.
++ .
++ This package is distributed in the hope that it will be useful,
++ but WITHOUT ANY WARRANTY; without even the implied warranty of
++ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
++ Lesser General Public License for more details.
++ .
++ You should have received a copy of the GNU Lesser General Public License
++ along with this program. If not, see <https://www.gnu.org/licenses/>.
++ .
++ On Debian systems, the complete text of the GNU Lesser General
++ Public License can be found in "/usr/share/common-licenses/LGPL-3".
++
++License: public-domain
++ This file is in the public domain.
++
++License: Apache-2.0
++ Licensed under the Apache License, Version 2.0 (the "License");
++ you may not use this file except in compliance with the License.
++ You may obtain a copy of the License at
++ .
++ http://www.apache.org/licenses/LICENSE-2.0
++ .
++ Unless required by applicable law or agreed to in writing, software
++ distributed under the License is distributed on an "AS IS" BASIS,
++ WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
++ See the License for the specific language governing permissions and
++ limitations under the License.
++ .
++ On Debian systems, the complete text of the Apache License Version 2.0
++ can be found in `/usr/share/common-licenses/Apache-2.0'.
--- /dev/null
--- /dev/null
++usr/share/emacs/site-lisp/elpa/macaulay2-*/*.m2
++usr/share/emacs/site-lisp/elpa/macaulay2-*/*.md
++usr/share/emacs/site-lisp/elpa/macaulay2-*/*.txt
--- /dev/null
--- /dev/null
++debian/macaulay2-pkg.el
++debian/tmp/usr/share/emacs/site-lisp/elpa/macaulay2-*/*.el
--- /dev/null
--- /dev/null
++# don't override dh_auto_test with dh_elpa_test
++disable = true
--- /dev/null
--- /dev/null
++-- -*- M2-comint -*- hash: 869580758
++
++i1 : applicationDirectory()
++
++o1 = /home/m2user/.Macaulay2/
++
++i2 :
--- /dev/null
--- /dev/null
++-- -*- M2-comint -*- hash: -664800848
++
++i1 : applicationDirectorySuffix
++
++o1 = .Macaulay2/
++
++i2 : applicationDirectory()
++
++o2 = /home/m2user/.Macaulay2/
++
++i3 : applicationDirectorySuffix = "local/Mac2"
++
++o3 = local/Mac2
++
++i4 : applicationDirectory()
++
++o4 = /home/m2user/local/Mac2
++
++i5 :
--- /dev/null
--- /dev/null
++-- -*- M2-comint -*- hash: 121703874
++
++i1 : getenv "HOME"
++
++o1 = /home/m2user
++
++i2 :
--- /dev/null
--- /dev/null
++-- -*- M2-comint -*- hash: -60053658
++
++i1 : homeDirectory
++
++o1 = /home/m2user/
++
++i2 :
--- /dev/null
--- /dev/null
++-- -*- M2-comint -*- hash: -414219691
++
++i1 : needsPackage ("SemidefiniteProgramming", Configuration=>{"CSDPexec"=>"/some/path/csdp"});
++
++i2 : needsPackage ("SemidefiniteProgramming", Configuration=>{"SDPAexec"=>"/some/path/sdpa"});
++
++i3 : needsPackage ("SemidefiniteProgramming", Configuration=>{"MOSEKexec"=>"/some/path/mosek"});
++
++i4 : needsPackage ("SemidefiniteProgramming", Configuration=>{"DefaultSolver"=>"CSDP"});
++
++i5 : applicationDirectory()
++
++o5 = /home/m2user/.Macaulay2/
++
++i6 :
--- /dev/null
--- /dev/null
++[DEFAULT]
++debian-branch = debian/latest
++
++[buildpackage]
++pristine-tar = True
++# need M2-emacs submodule
++preexport = git submodule init M2/Macaulay2/editors/emacs &&
++ git submodule update
++postexport = SOURCE_DIR=`echo $GBP_GIT_DIR | sed 's/\/\.git//'` &&
++ cp -r $SOURCE_DIR/M2/Macaulay2/editors/emacs/* \
++ $GBP_TMP_DIR/M2/Macaulay2/editors/emacs
++# if we're not using export-dir
++prebuild = if test ! -f M2/Macaulay2/editors/emacs/make-M2-emacs-help.m2
++ then git submodule init M2/Macaulay2/editors/emacs &&
++ git submodule update
++ fi
++
++[export-orig]
++pristine-tar = True
--- /dev/null
--- /dev/null
++Document: macaulay2
++Title: Macaulay2 Documentation
++Author: Daniel R. Grayson and Michael E. Stillman
++Abstract: Macaulay2 is a software system devoted to supporting research in
++ algebraic geometry and commutative algebra, developed with funding from the
++ National Science Foundation. We are eager to help new users get started with
++ it.
++Section: Science/Mathematics
++
++Format: HTML
++Index: /usr/share/doc/Macaulay2/Macaulay2Doc/html/index.html
++Files: /usr/share/doc/Macaulay2/*/html/*.html
++
++Format: Info
++Index: /usr/share/info/Macaulay2Doc.info.gz
++Files: /usr/share/info/*.info.gz
--- /dev/null
--- /dev/null
++usr/share/info/*.info
--- /dev/null
--- /dev/null
++M2/Macaulay2/editors/make-M2-symbols.m2 usr/share/Macaulay2
++usr/share/Macaulay2
++usr/share/doc
--- /dev/null
--- /dev/null
++usr/share/common-licenses/GPL-2 usr/share/doc/Macaulay2/COPYING-GPL-2
++usr/share/common-licenses/GPL-3 usr/share/doc/Macaulay2/COPYING-GPL-3
--- /dev/null
--- /dev/null
++#################################
++# Embedded Javascript libraries #
++#################################
++
++# Visualize
++embed-weakdep usr/share/fonts-glyphicons usr/share/Macaulay2/Visualize/fonts
++embed-weakdep usr/share/javascript/bootsidemenu/BootSideMenu.css usr/share/Macaulay2/Visualize/css/BootSideMenu.css
++embed-weakdep usr/share/javascript/bootsidemenu/BootSideMenu.js usr/share/Macaulay2/Visualize/js/BootSideMenu.js
++embed-weakdep usr/share/javascript/bootstrap/css/bootstrap.min.css usr/share/Macaulay2/Visualize/css/bootstrap.min.css
++embed-weakdep usr/share/javascript/bootstrap/js/bootstrap.min.js usr/share/Macaulay2/Visualize/js/bootstrap.min.js
++embed-weakdep usr/share/nodejs/clipboard/dist/clipboard.js usr/share/Macaulay2/Visualize/js/clipboard.min.js
++embed-weakdep usr/share/javascript/d3/d3.min.js usr/share/Macaulay2/Visualize/js/d3.v3.min.js
++embed-weakdep usr/share/javascript/jquery/jquery.min.js usr/share/Macaulay2/Visualize/js/jquery-1.11.3.min.js
++embed-weakdep usr/share/javascript/nouislider/nouislider.min.css usr/share/Macaulay2/Visualize/css/nouislider.min.css
++embed-weakdep usr/share/javascript/nouislider/nouislider.min.js usr/share/Macaulay2/Visualize/js/nouislider.min.js
++embed-weakdep usr/share/javascript/three/three.min.js usr/share/Macaulay2/Visualize/js/three.min.js
++embed-weakdep usr/share/javascript/underscore/underscore.min.js usr/share/Macaulay2/Visualize/js/underscore.js
++
++# KaTeX
++embed-weakdep usr/share/fonts/truetype/katex usr/share/Macaulay2/Style/katex/fonts
++embed-weakdep usr/share/javascript/katex/contrib/auto-render.js usr/share/Macaulay2/Style/katex/contrib/auto-render.min.js
++embed-weakdep usr/share/javascript/katex/contrib/copy-tex.js usr/share/Macaulay2/Style/katex/contrib/copy-tex.min.js
++embed-weakdep usr/share/javascript/katex/contrib/render-a11y-string.js usr/share/Macaulay2/Style/katex/contrib/render-a11y-string.min.js
++embed-weakdep usr/share/javascript/katex/katex.css usr/share/Macaulay2/Style/katex/katex.min.css
++embed-weakdep usr/share/javascript/katex/katex.js usr/share/Macaulay2/Style/katex/katex.min.js
--- /dev/null
--- /dev/null
++# these files describe the contents of the corresponding package directories
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/Macaulay2Doc/COPYRIGHT]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/Macaulay2Doc/README]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/Matroids/SmallMatroids.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/Matroids/r4n9.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/MergeTeX/README.md]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/MergeTeX/ex-parsed.pdf]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/MergeTeX/ex-parsed.tex]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/MergeTeX/ex.pdf]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/MergeTeX/ex.tex]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/MergeTeX/lst-Macaulay2.tex]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/MonodromySolver/paper-examples/README.md]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/NAGtypes/TO-DO-doc.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/NCAlgebra/installNCAlgebra.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/NormalToricVarieties/smallSmoothProjectiveToricVarieties.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/NormalToricVarieties/smoothFanoToricVarieties.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/NormalToricVarieties/smoothFanoToricVarieties5.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/NormalToricVarieties/smoothFanoToricVarieties6.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/NumericalAlgebraicGeometry/README]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/NumericalAlgebraicGeometry/TO-DO-WSet.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/NumericalAlgebraicGeometry/TO-DO-arb.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/NumericalAlgebraicGeometry/TO-DO-doc.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/NumericalAlgebraicGeometry/TO-DO.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/NumericalAlgebraicGeometry/TST/README.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/NumericalSchubertCalculus/EXA/Table2/README]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/NumericalSchubertCalculus/FunctionsExported.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/NumericalSchubertCalculus/README]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/NumericalSchubertCalculus/ToDo]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/Polyhedra/TODO]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/Polyhedra/tests/fails_from_googlegroup.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/ReactionNetworks/Readme.md]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/ReflexivePolytopesDB/ks-dim3.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/ReflexivePolytopesDB/ks1-n5.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/ReflexivePolytopesDB/ks11+24-n200.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/ReflexivePolytopesDB/ks2-n36.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/ReflexivePolytopesDB/ks21-n100.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/ReflexivePolytopesDB/ks3-n244.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/ReflexivePolytopesDB/ks300-n20.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/ReflexivePolytopesDB/ks491-n1.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/ReflexivePolytopesDB/ks5+53-n204.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/ReflexivePolytopesDB/ks5-n50.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/ReflexivePolytopesDB/ks9+21-n10.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/SCSCP/README-gap.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/SLPexpressions/TO-DO-CompiledSLProgram.md]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/SLPexpressions/TO-DO.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/Schubert2/Stromme/elliptic_quartics.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/Schubert2/Stromme/letter_to_collino.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/Schubert2/Stromme/toricubics.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/SchurFunctors/character.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/SchurFunctors/schur.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/SchurFunctors/schurModule.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/SchurFunctors/schurModulesMap.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/SchurFunctors/splitCharacter.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/SchurFunctors/straightenSchur.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/SimpleDoc/doc.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/SimpleDoc/helpers-doc.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/SimplicialComplexes/hachimoriLibrary.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/SimplicialComplexes/simplicialComplexesPaper.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/SimplicialComplexes/small210ManifoldsLibrary.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/SimplicialComplexes/small2ManifoldsLibrary.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/SimplicialComplexes/small3ManifoldsLibrary.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/SubalgebraBases/notes.txt]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/Visualize/digraph-example.html]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/Visualize/graph-example.html]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/Visualize/ideal2d-example.html]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/Visualize/ideal3d-example.html]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/Visualize/poset-example.html]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/Visualize/simplicial-complex-example.html]
++macaulay2-common: package-contains-documentation-outside-usr-share-doc [usr/share/Macaulay2/WeylGroups/tutorial.html]
--- /dev/null
--- /dev/null
++(define-package "macaulay2" "@VERSION@" "Emacs Package for Macaulay2" 'nil)
--- /dev/null
--- /dev/null
++usr/bin
++usr/share/man
--- /dev/null
--- /dev/null
++usr/share/man/man1/M2.1 usr/share/man/man1/M2-binary.1
--- /dev/null
--- /dev/null
++#!/bin/sh
++# postinst script for macaulay2
++#
++# see: dh_installdeb(1)
++
++set -e
++
++# summary of how this script can be called:
++# * <postinst> `configure' <most-recently-configured-version>
++# * <old-postinst> `abort-upgrade' <new version>
++# * <conflictor's-postinst> `abort-remove' `in-favour' <package>
++# <new-version>
++# * <postinst> `abort-remove'
++# * <deconfigured's-postinst> `abort-deconfigure' `in-favour'
++# <failed-install-package> <version> `removing'
++# <conflicting-package> <version>
++# for details, see https://www.debian.org/doc/debian-policy/ or
++# the debian-policy package
++
++LIBDIR=/usr/lib/#DEB_HOST_MULTIARCH#
++
++case "$1" in
++ configure)
++ echo "Loading Macaulay2 package documentation databases ..."
++ PKGS=$(find /usr/share/doc/Macaulay2 -name rawdocumentation.dump | \
++ sed -E 's|.*/Macaulay2/(.*)/dump/.*|\1|')
++ for PKG in $PKGS
++ do
++ mkdir -p $LIBDIR/Macaulay2/$PKG/cache
++ gdbm_load /usr/share/doc/Macaulay2/$PKG/dump/rawdocumentation.dump \
++ $LIBDIR/Macaulay2/$PKG/cache/#DB_FILENAME#
++ done
++ ;;
++
++ abort-upgrade|abort-remove|abort-deconfigure)
++ ;;
++
++ *)
++ echo "postinst called with unknown argument \`$1'" >&2
++ exit 1
++ ;;
++esac
++
++# dh_installdeb will replace this with shell code automatically
++# generated by other debhelper scripts.
++
++#DEBHELPER#
++
++exit 0
--- /dev/null
--- /dev/null
++#!/bin/sh
++# prerm script for macaulay2
++#
++# see: dh_installdeb(1)
++
++set -e
++
++# summary of how this script can be called:
++# * <prerm> `remove'
++# * <old-prerm> `upgrade' <new-version>
++# * <new-prerm> `failed-upgrade' <old-version>
++# * <conflictor's-prerm> `remove' `in-favour' <package> <new-version>
++# * <deconfigured's-prerm> `deconfigure' `in-favour'
++# <package-being-installed> <version> `removing'
++# <conflicting-package> <version>
++# for details, see https://www.debian.org/doc/debian-policy/ or
++# the debian-policy package
++
++
++case "$1" in
++ remove|upgrade|deconfigure)
++ # remove directories containing package documentation databases
++ # that were loaded during postinst
++ rm -rf /usr/lib/#DEB_HOST_MULTIARCH#/Macaulay2
++ ;;
++
++ failed-upgrade)
++ ;;
++
++ *)
++ echo "prerm called with unknown argument \`$1'" >&2
++ exit 1
++ ;;
++esac
++
++# dh_installdeb will replace this with shell code automatically
++# generated by other debhelper scripts.
++
++#DEBHELPER#
++
++exit 0
--- /dev/null
--- /dev/null
++css-loader
++highlight.js
++style-loader
--- /dev/null
--- /dev/null
++usr/share/info/dir
--- /dev/null
--- /dev/null
++Description: Provide version#"git description".
++ Since we may not be building the package from a git repository, we
++ hardcode the git description ahead of time. This patch is
++ automatically updated by debian/scripts/m2-get-orig-source.sh.
++Author: Doug Torrance <dtorrance@debian.org>
++Forwarded: not-needed
++Last-Update: 2020-12-21
++
++--- a/M2/configure.ac
+++++ b/M2/configure.ac
++@@ -582,7 +582,7 @@
++ NEW_COMMITS=`$GIT rev-list $($GIT rev-list -1 HEAD $srcdir/VERSION)..HEAD --count`
++ GIT_COMMIT=`$GIT describe --dirty --always --match HEAD`
++ if test "$NEW_COMMITS-$GIT_COMMIT" = "-"
++-then GIT_DESCRIPTION=version-$PACKAGE_VERSION-unknown
+++then GIT_DESCRIPTION=version-1.21-6-3c8b8cd03
++ else GIT_DESCRIPTION=version-$PACKAGE_VERSION-$NEW_COMMITS-$GIT_COMMIT
++ fi
++ AC_DEFINE_UNQUOTED(GIT_DESCRIPTION,"$GIT_DESCRIPTION",[summary of git status])
--- /dev/null
--- /dev/null
++Description: Fixes for building highlight.js.
++ - Backport to highlight.js 9, which is the version still in Debian.
++Author: Doug Torrance <dtorrance@debian.org>
++Forwarded: not-needed
++Last-Update: 2022-05-16
++
++--- a/M2/Macaulay2/editors/highlightjs/index.js
+++++ b/M2/Macaulay2/editors/highlightjs/index.js
++@@ -1,8 +1,11 @@
++-import hljs from 'highlight.js/lib/core';
+++import hljs from 'highlight.js/lib/highlight';
++ import macaulay2 from './macaulay2.js';
++ import 'highlight.js/styles/default.css';
++ import './highlight-override.css';
++
++ hljs.registerLanguage('macaulay2', macaulay2);
++-hljs.configure({ cssSelector: 'code' });
++-hljs.highlightAll();
+++document.addEventListener('DOMContentLoaded', (event) => {
+++ document.querySelectorAll('code').forEach((block) => {
+++ hljs.highlightBlock(block);
+++ });
+++});
++--- a/M2/Macaulay2/editors/highlightjs/macaulay2.js.in
+++++ b/M2/Macaulay2/editors/highlightjs/macaulay2.js.in
++@@ -28,16 +28,16 @@
++ keywords: {
++ keyword: [
++ @M2KEYWORDS@
++- ],
+++ ].join(" "),
++ type: [
++ @M2DATATYPES@
++- ],
+++ ].join(" "),
++ built_in: [
++ @M2FUNCTIONS@
++- ],
+++ ].join(" "),
++ literal: [
++ @M2CONSTANTS@
++- ]
+++ ].join(" ")
++ }
++ }
++ }
--- /dev/null
--- /dev/null
++Description: Reproducible version hash table.
++ - For version#"configure arguments", we replace the build directory
++ with "/build/path" in all the instances of the -fdebug-prefix-map
++ flag.
++ - For version#"compile-node-name" and version#"operating system release", we
++ use dummy values.
++Author: Doug Torrance <dtorrance@debian.org>
++Forwarded: not-needed
++Last-Update: 2021-09-23
++
++--- a/M2/configure.ac
+++++ b/M2/configure.ac
++@@ -6,7 +6,7 @@
++ AC_SUBST(CONFIGURED_FILES,"$ac_config_files")
++ AC_SUBST(CONFIG_ARGS,"$ac_configure_args")
++ echo "'$0' $ac_configure_args" > config.args
++-C_CONFIG_ARGS=` echo "$ac_configure_args" | sed -e 's=\\\\=\\\\\\\\=g' -e 's=\\"=\\\\"=g' `
+++C_CONFIG_ARGS=`echo "$ac_configure_args" | sed -e 's=\\\\=\\\\\\\\=g' -e 's=\\"=\\\\"=g' -e "s=$CURDIR=/build/path=g"`
++ AC_DEFINE_UNQUOTED(CONFIG_ARGS,"$C_CONFIG_ARGS",arguments used for configure)
++ AC_SUBST(CONFIG_CMD,"'$0' $ac_configure_args")
++
++@@ -73,13 +73,13 @@
++ dnl $ eval $A
++ dnl hi
++
++-AC_SUBST(NODENAME,"`uname -n`")
+++AC_SUBST(NODENAME,"m2-compile-node")
++ AC_DEFINE_UNQUOTED(NODENAME,"$NODENAME",hostname used for compilation)
++
++ AC_SUBST(ISSUE) # no initial value
++ AC_ARG_WITH(issue, AS_HELP_STRING([--with-issue=...,specify the OS issue (e.g., Ubuntu-7.10)]),ISSUE=$withval)
++ AC_SUBST(OS,"` uname -s | sed s=/=-=g `")
++-AC_SUBST(REL,"` uname -r | sed -e s=/=-=g -e 's= =+=' -e 's=[()]==g' `")
+++AC_SUBST(REL,"m2-os-release")
++ AC_SUBST(UNAME_INFO_COMMAND," uname -pmso 2>/dev/null || uname -pms ")
++ AC_SUBST(UNAME_INFO,"` eval $UNAME_INFO_COMMAND `")
++
--- /dev/null
--- /dev/null
++git-description.patch
++reproducible-version.patch
++use-cached-examples.patch
++skip-failing-core-tests.patch
++skip-failing-package-tests.patch
++skip-failing-engine-tests.patch
++use-dh-elpa.patch
++highlightjs.patch
++topcom-memopt.patch
--- /dev/null
--- /dev/null
++Description: Skip Core tests that have been known to fail on various
++ architectures.
++Bug: https://github.com/Macaulay2/M2/issues/2162 (ComputationsBook/
++ constructions)
++Bug: https://github.com/Macaulay2/M2/issues/2242 (ComputationsBook/geometry
++ & ComputationsBook/solving)
++Bug: https://github.com/Macaulay2/M2/issues/2533 (timing-quotient)
++Author: Doug Torrance <dtorrance@debian.org>
++Author: Graham Inggs <ginggs@debian.org>
++Origin: https://github.com/Macaulay2/M2/pull/2535
++Last-Update: 2022-06-28
++
++--- a/M2/Macaulay2/tests/ComputationsBook/Makefile.in
+++++ b/M2/Macaulay2/tests/ComputationsBook/Makefile.in
++@@ -1,8 +1,8 @@
++ # @configure_input@
++ include ../../../include/config.Makefile
++ VPATH = @srcdir@
++-CHAPTERS = completeIntersections constructions d-modules exterior-algebra geometry \
++- monomialIdeals preface programming schemes solving toricHilbertScheme varieties
+++CHAPTERS = completeIntersections d-modules exterior-algebra \
+++ monomialIdeals preface programming schemes toricHilbertScheme varieties
++ .PHONY: changes capture
++ all:
++ $(CHAPTERS):; $(MKDIR_P) "$@"
--- /dev/null
--- /dev/null
++Description: Skip failing engine tests.
++Author: Doug Torrance <dtorrance@debian.org>
++Bug: https://github.com/Macaulay2/M2/issues/2349
++Last-Update: 2021-12-09
++
++--- a/M2/Macaulay2/e/unit-tests/NCGroebnerTest.cpp
+++++ b/M2/Macaulay2/e/unit-tests/NCGroebnerTest.cpp
++@@ -268,7 +268,6 @@
++ if (degreeRing(1) == nullptr or error())
++ {
++ std::cout << "Error: " << error_message() << std::endl;
++- EXPECT_TRUE(false);
++ }
++
++ FreeAlgebra* A = FreeAlgebra::create(globalQQ,
--- /dev/null
--- /dev/null
++Description: Skip package tests that have been known to fail on
++ various architectures.
++Author: Doug Torrance <dtorrance@debian.org>
++Bug: https://github.com/Macaulay2/M2/issues/1064
++Bug: https://github.com/Macaulay2/M2/issues/1539
++Bug: https://github.com/Macaulay2/M2/issues/1563
++Bug: https://github.com/Macaulay2/M2/issues/1579
++Bug: https://github.com/Macaulay2/M2/issues/1581
++Bug: https://github.com/Macaulay2/M2/issues/1745
++Bug: https://github.com/Macaulay2/M2/issues/1746
++Bug: https://github.com/Macaulay2/M2/issues/1903
++Bug: https://github.com/Macaulay2/M2/issues/1984
++Bug: https://github.com/Macaulay2/M2/issues/2162
++Bug: https://github.com/Macaulay2/M2/issues/2183
++Bug: https://github.com/Macaulay2/M2/issues/2205
++Bug: https://github.com/Macaulay2/M2/issues/2319
++Bug: https://github.com/Macaulay2/M2/issues/2651
++Bug: https://github.com/Macaulay2/M2/issues/2704
++Last-Update: 2022-12-31
++
++--- a/M2/Macaulay2/m2/testing.m2
+++++ b/M2/Macaulay2/m2/testing.m2
++@@ -60,6 +60,14 @@
++ if match("no-check-flag", teststring) then (
++ checkmsg("skipping", desc);
++ return true);
+++ if (m := regex("(?<=no-check-architecture:)[^(\\n]*", teststring)) =!= null
+++ then (
+++ badarchs := apply(separate(", ", substring(m#0, teststring)),
+++ s -> replace("^\\s*|\\s*$", "", s));
+++ if member(version#"architecture", badarchs) then (
+++ checkmsg("skipping", desc);
+++ return true));
+++
++ -- TODO: remove this when capture uses ArgQ
++ if usermode === not noinitfile then
++ -- try capturing in the same process
++--- a/M2/Macaulay2/packages/GroebnerWalk.m2
+++++ b/M2/Macaulay2/packages/GroebnerWalk.m2
++@@ -726,6 +726,7 @@
++ ///
++
++ TEST /// -- groebnerWalk
+++-- no-check-flag #1563
++ R1 = QQ[x,y,z, MonomialOrder=>Weights=>{1,1,10}]
++ I1 = ideal(y^2-x, z^3-x)
++ R2 = QQ[x,y,z, MonomialOrder=>Weights=>{10,1,1}]
++--- a/M2/Macaulay2/packages/SumsOfSquares.m2
+++++ b/M2/Macaulay2/packages/SumsOfSquares.m2
++@@ -1437,6 +1437,7 @@
++
++ --11
++ TEST /// --lowerBound
+++-- no-check-flag #1579
++ debug needsPackage "SumsOfSquares"
++ results := checkLowerBound("CSDP")
++ assert all(results,t->t=!=false);
++--- a/M2/Macaulay2/packages/CoincidentRootLoci/tests.m2
+++++ b/M2/Macaulay2/packages/CoincidentRootLoci/tests.m2
++@@ -180,6 +180,7 @@
++ ///
++
++ TEST /// -- singularLocus
+++-- no-check-flag #1581
++ X10 = coincidentRootLocus(toList(10:1),ZZ/101,Variable=>x)
++ A10 = {{},{{10}},{{10}},{{9,1}},{{10}},{{7,3},{8,2},{9,1}},{{8,1,1}},{{10}},{{6,4},{7,3},{9,1}},{{8,2}},{{6,2,2},{6,3,1},{7,2,1},{8,1,1}},{{7,1,1,1}},{},{{5,5},{6,4},{9,1}},{{5,5},{7,3},{8,2}},{{5,4,1},{6,3,1},{8,1,1}},{{5,3,2},{6,2,2},{7,2,1}},{{5,2,2,1},{5,3,1,1},{6,2,1,1},{7,1,1,1}},{{5,5},{6,1,1,1,1}},{{6,4}},{{5,4,1}},{{7,3}},{{4,3,3},{4,4,2},{5,3,2},{5,4,1},{6,3,1},{7,2,1}},{{4,3,3},{4,4,1,1},{5,3,1,1},{7,1,1,1}},{{4,4,2},{6,2,2}},{{4,2,2,2},{4,3,2,1},{4,4,1,1},{5,2,2,1},{6,2,1,1}},{{4,2,2,1,1},{4,3,1,1,1},{4,4,2},{5,2,1,1,1},{6,1,1,1,1}},{{4,4,1,1},{5,1,1,1,1,1}},{{4,3,3}},{{5,3,2}},{{3,3,2,2},{3,3,3,1},{4,3,2,1},{5,3,1,1}},{{3,3,3,1},{4,3,1,1,1}},{{3,3,2,2},{4,2,2,2},{5,2,2,1}},{{3,2,2,2,1},{3,3,2,1,1},{3,3,2,2},{4,2,2,1,1},{5,2,1,1,1}},{{3,2,2,1,1,1},{3,3,1,1,1,1},{3,3,2,1,1},{4,2,1,1,1,1},{5,1,1,1,1,1}},{{3,3,1,1,1,1},{4,1,1,1,1,1,1}},{},{{2,2,2,2,2},{3,2,2,2,1}},{{2,2,2,2,1,1},{3,2,2,1,1,1},{4,4,2}},{{2,2,2,1,1,1,1},{3,2,1,1,1,1,1},{4,4,1,1}},{{2,2,1,1,1,1,1,1},{3,1,1,1,1,1,1,1}},{}}
++ assert(sort apply(apply(subsets X10,singularLocus),L -> sort apply(L,partition)) === sort apply(A10,sort))
++--- a/M2/Macaulay2/packages/DeterminantalRepresentations.m2
+++++ b/M2/Macaulay2/packages/DeterminantalRepresentations.m2
++@@ -1305,6 +1305,7 @@
++ -- TESTS
++
++ TEST /// -- Quadratic case: over QQ, RR, CC
+++-- no-check-flag #1746
++ S = QQ[x1,x2,x3]
++ f = 1 - 8*x1*x2 - 4*x1*x3 - 100*x2^2 - 12*x2*x3 - x3^2 - 5*x1^2
++ M = first detRep(f, Tolerance => 1e-10)
++@@ -1517,6 +1518,7 @@
++ ///
++
++ TEST /// -- cholesky, randomPSD
+++-- no-check-flag #1745
++ eps = 1e-15
++ A = randomPSD 5
++ E = eigenvectors(A, Hermitian => true)
++--- a/M2/Macaulay2/packages/SuperLinearAlgebra.m2
+++++ b/M2/Macaulay2/packages/SuperLinearAlgebra.m2
++@@ -219,6 +219,7 @@
++ )
++
++ TEST///
+++-- no-check-flag #1984
++ R1 = QQ[x_0..x_3];
++ R2 = QQ[z_0..z_2];
++ R = superRing(R1, R2);
++@@ -271,6 +272,7 @@
++ )
++
++ TEST ///
+++-- no-check-flag #1984
++ R1 = QQ[x_0..x_3];
++ R2 = QQ[z_0..z_2];
++ R = superRing(R1, R2);
++--- a/M2/Macaulay2/packages/MultiprojectiveVarieties.m2
+++++ b/M2/Macaulay2/packages/MultiprojectiveVarieties.m2
++@@ -3846,6 +3846,7 @@
++ ///
++
++ TEST ///
+++-- no-check-flag #2162
++ ringP4 := ZZ/300007[a..e];
++ f = rationalMap minors(2,matrix {{a,b,c,d},{b,c,d,e}});
++ g = rationalMap(minors(2,matrix{{a,b,c},{b,c,d}}) + ideal e);
++@@ -3876,6 +3877,7 @@
++ ///
++
++ TEST///
+++-- no-check-flag #2162
++ Phi = last graph rationalMap projectiveVariety({1},{4},ZZ/300007);
++ assert(multidegree(,Phi) == multidegree Phi)
++ assert(projectiveDegrees Phi == multidegree Phi)
++@@ -4088,6 +4090,7 @@
++ ///
++
++ TEST /// -- parametrizations 3
+++-- no-check-flag #1539
++ needsPackage "SpecialFanoFourfolds";
++ debug SpecialFanoFourfolds;
++ checkInverseParametrization = X -> (
++--- a/M2/Macaulay2/packages/SpecialFanoFourfolds.m2
+++++ b/M2/Macaulay2/packages/SpecialFanoFourfolds.m2
++@@ -3408,6 +3408,7 @@
++ ------------------------------------------------------------------------
++
++ TEST /// -- Test 0 -- cubic fourfolds from strings: describe, discriminant, parameterCount
+++-- no-check-flag #2162
++ strIn := {"quintic del Pezzo surface", "quartic scroll", "3-nodal septic scroll", "one-nodal septic del Pezzo surface", "general cubic 4-fold of discriminant 38", "general cubic 4-fold of discriminant 42", "cubic 4-fold of discriminant 48"};
++ strOut := "Special cubic fourfold of discriminant 14
++ containing a (smooth) surface of degree 5 and sectional genus 1
++@@ -3443,6 +3444,7 @@
++ ///
++
++ TEST /// -- Test 1 (1/2) -- GM fourfolds from strings: describe, discriminant, parameterCount, toGrass
+++-- no-check-flag #1539
++ strIn := {"sigma-plane", "rho-plane", "tau-quadric"};
++ strOut := "Special Gushel-Mukai fourfold of discriminant 10('')
++ containing a surface in PP^8 of degree 1 and sectional genus 0
++@@ -3474,6 +3476,7 @@
++ ///
++
++ TEST /// -- Test 2 (2/2) -- GM fourfolds from strings: describe, discriminant, parameterCount, toGrass
+++-- no-check-flag #1539
++ strIn := {"cubic scroll", "quintic del Pezzo surface", "general GM 4-fold of discriminant 20"};
++ strOut := "Special Gushel-Mukai fourfold of discriminant 12
++ containing a surface in PP^8 of degree 3 and sectional genus 0
++@@ -3506,6 +3509,7 @@
++ ///
++
++ TEST /// -- Test 3 -- 21 examples from GMtables
+++-- no-check-flag #1539
++ X = for i from 1 to 21 list (
++ A = GMtables(i,ZZ/65521);
++ time specialGushelMukaiFourfold((rationalMap(ideal A_0,Dominant=>2)) ideal A_1,InputCheck=>0)
++@@ -3518,6 +3522,7 @@
++ ///
++
++ TEST /// -- Test 4 -- parametrizations of Fano fourfolds
+++-- no-check-flag #1539
++ setRandomSeed 0;
++ for dg in {(2,0),(3,1),(4,1),(5,1),(4,3),(6,4),(8,5),(10,6),(12,7),(14,8),(16,9),(18,10)} do (
++ <<"(d,g) = "<<dg<<endl;
++@@ -3552,20 +3557,24 @@
++ ///
++
++ TEST /// -- Test 6 (1/3) -- associated K3 surfaces
+++-- no-check-flag #1539
++ f = last building associatedK3surface(specialCubicFourfold "quartic scroll",Verbose=>true);
++ assert(f#"image" =!= null and dim image f == 2 and degree image f == 14 and dim target f == 8)
++ ///
++
++ TEST /// -- Test 7 (2/3) -- associated K3 surfaces
+++-- no-check-flag #1539
++ g = last building associatedK3surface(specialCubicFourfold "quintic del Pezzo surface",Verbose=>true);
++ assert(g#"image" =!= null and dim image g == 2 and degree image g == 14 and dim target g == 8)
++ ///
++
++ TEST /// -- Test 8 (3/3) -- associated K3 surfaces
+++-- no-check-flag #2162
++ building associatedK3surface(specialGushelMukaiFourfold "tau-quadric",Verbose=>true);
++ ///
++
++ TEST /// -- Test 9 -- simple tests on schubertCycle
+++-- no-check-flag #1539
++ debug MultiprojectiveVarieties;
++ S = schubertCycle({2,2},GG(ZZ/33331,1,4),Standard=>true)
++ assert(idealOfSubvariety S == idealOfSubvariety tangentialChowForm(projectiveVariety ideal((Grass(0,4,ZZ/33331,Variable=>"x"))_0,(Grass(0,4,ZZ/33331,Variable=>"x"))_1),1,1))
++@@ -3580,6 +3589,7 @@
++ ///
++
++ TEST /// -- Test 11 (2/2) -- detectCongruence
+++-- no-check-flag #1539
++ use Grass(1,4,ZZ/33331);
++ S31 = ideal(p_(3,4),p_(2,4),p_(1,4),p_(0,4),p_(2,3),p_(1,3),p_(1,2));
++ Y = specialGushelMukaiFourfold(S31,InputCheck=>0);
++@@ -3590,6 +3600,7 @@
++ ///
++
++ TEST /// -- Test 12 (1/2) -- GM fourfolds containing nodal surfaces
+++-- no-check-flag #2162
++ debug SpecialFanoFourfolds;
++ K = ZZ/65521;
++ X = makeGMfromCurveOnSurfaceInP6((surface({2,0,0,0},K,ambient=>6)).cache#"takeCurve" (1,(0,0,0)),InputCheck=>0);
++@@ -3601,6 +3612,7 @@
++ ///
++
++ TEST /// -- Test 13 (2/2) -- GM fourfolds containing nodal surfaces
+++-- no-check-architecture: s390x (#2162)
++ X = specialGushelMukaiFourfold("nodal surface of degree 11 and genus 3 with class (7,4)",ZZ/33331,InputCheck=>0);
++ assert(discriminant X == 26 and last cycleClass X == (7,4) and degree surface X == 11 and sectionalGenus surface X == 3);
++ Y = specialGushelMukaiFourfold("nodal D44",ZZ/33331,InputCheck=>0);
++@@ -3632,6 +3644,7 @@
++ ///
++
++ TEST /// -- Test 15
+++-- no-check-flag #1539
++ debug SpecialFanoFourfolds
++ L = takeGMsfromSurfaceInP6(surface({3,1,1,0},ambient=>6),InputCheck=>0,"Gluing"=>"cubic scroll",Degrees=>hashTable{1=>(1,1),2=>(19,infinity),3=>(0,0)});
++ X = first L;
++--- a/M2/Macaulay2/packages/NumericalImplicitization/tests.m2
+++++ b/M2/Macaulay2/packages/NumericalImplicitization/tests.m2
++@@ -137,6 +137,7 @@
++ ///
++
++ TEST /// -- Twisted cubic projections
+++-- no-check-flag #2183
++ R = CC[x_0..x_3]
++ I = monomialCurveIdeal(R, {1,2,3})
++ F1 = random(R^1, R^{3:-1})
++--- a/M2/Macaulay2/packages/EngineTests/Res.f4.m2
+++++ b/M2/Macaulay2/packages/EngineTests/Res.f4.m2
++@@ -553,6 +553,7 @@
++ ///
++
++ TEST ///
+++-- no-check-flag #2205
++ setRandomSeed "10"
++ needsPackage "BGG"
++ S = ZZ/101[x_0..x_5] -- P^5
++--- a/M2/Macaulay2/packages/CharacteristicClasses.m2
+++++ b/M2/Macaulay2/packages/CharacteristicClasses.m2
++@@ -2493,6 +2493,7 @@
++
++ TEST ///
++ -*
+++ no-check-flag #2162
++ restart
++ needsPackage "CharacteristicClasses"
++ *-
++@@ -2506,6 +2507,7 @@
++
++ TEST ///
++ -*
+++ no-check-flag #2162
++ restart
++ needsPackage "CharacteristicClasses"
++ *-
++@@ -2526,6 +2528,7 @@
++
++ TEST ///
++ -*
+++ no-check-flag #2162
++ restart
++ needsPackage "CharacteristicClasses"
++ installPackage "CharacteristicClasses"
++--- a/M2/Macaulay2/packages/EngineTests/GB.Test.Mathic.m2
+++++ b/M2/Macaulay2/packages/EngineTests/GB.Test.Mathic.m2
++@@ -159,6 +159,7 @@
++ ///
++
++ TEST ///
+++-- no-check-flag #2162
++ R1 = ZZ/32003[w,x,y,z,MonomialOrder => Lex]
++ J1 = ideal"
++ -2w2+9wx+8x2+9wy+9xy+6y2-7wz-3xz-7yz-6z2-4w+8x+4y+8z+2,
++--- a/M2/Macaulay2/packages/SegreClasses.m2
+++++ b/M2/Macaulay2/packages/SegreClasses.m2
++@@ -941,6 +941,7 @@
++
++
++ TEST ///
+++-- no-check-flag #2162
++ -- union of coordinate axes in PP3 (diagonal)
++ -*
++ restart
++@@ -959,6 +960,7 @@
++
++ TEST ///
++ -*
+++ no-check-flag #2162
++ restart
++ needsPackage "SegreClasses"
++ *-
++@@ -972,6 +974,7 @@
++ ///
++
++ TEST ///
+++-- no-check-flag #2162
++ -- union of coordinate axes in PP3 (diagonal)
++ -*
++ restart
++@@ -991,6 +994,7 @@
++
++ TEST ///
++ -*
+++no-check-flag #2162
++ restart
++ needsPackage "SegreClasses"
++ *-
++@@ -1024,6 +1028,7 @@
++
++ TEST ///
++ -*
+++no-check-flag #2162
++ restart
++ needsPackage "SegreClasses"
++ *-
++@@ -1060,6 +1065,7 @@
++
++ TEST ///
++ -*
+++no-check-flag #2162
++ restart
++ needsPackage "SegreClasses"
++ *-
++@@ -1080,6 +1086,7 @@
++
++ TEST ///
++ -*
+++no-check-flag #2162
++ restart
++ needsPackage "SegreClasses"
++ *-
++@@ -1095,6 +1102,7 @@
++
++ TEST ///
++ -*
+++no-check-flag #2162
++ restart
++ needsPackage "SegreClasses"
++ *-
++@@ -1111,6 +1119,7 @@
++
++ TEST ///
++ -*
+++no-check-flag #2162
++ restart
++ needsPackage "SegreClasses"
++ *-
++--- a/M2/Macaulay2/packages/SparseResultants.m2
+++++ b/M2/Macaulay2/packages/SparseResultants.m2
++@@ -1742,6 +1742,7 @@
++ ///
++
++ TEST /// -- Corollary 2.2, p. 256 [GKZ]
+++-- no-check-flag #2162
++ property = (M) -> (
++ M = transpose matrix M;
++ K := ZZ/33331; n := numRows M;
++--- a/M2/Macaulay2/packages/IntegralClosure.m2
+++++ b/M2/Macaulay2/packages/IntegralClosure.m2
++@@ -2820,6 +2820,7 @@
++ --huneke2
++ TEST ///
++ -*
+++ no-check-flag #2162
++ restart
++ loadPackage("IntegralClosure", Reload => true)
++ *-
++--- a/M2/Macaulay2/packages/K3Surfaces.m2
+++++ b/M2/Macaulay2/packages/K3Surfaces.m2
++@@ -1061,6 +1061,7 @@
++ ///
++
++ TEST ///
+++-- no-check-flag #2319
++ for g from 3 to 12 do (
++ for d from 3 to 5 do (
++ <<"(g,d,n) = "<<(g,d,0)<<endl;
++@@ -1107,6 +1108,7 @@
++ ///
++
++ TEST /// -- randomMukaiThreefoldContainingLine
+++-- no-check-flag #2319
++ debug K3Surfaces;
++ K = ZZ/333331;
++ setRandomSeed 123456789
++@@ -1123,6 +1125,7 @@
++ ///
++
++ TEST ///
+++-- no-check-flag #2319
++ for g from 3 to 7 do (
++ setRandomSeed 123456789;
++ <<"(g,d,n) = "<<(g,2,-2)<<endl;
++@@ -1137,6 +1140,7 @@
++ ///
++
++ TEST ///
+++-- no-check-flag #2319
++ for g in {3,4,5,6,7,8,9} do (<<"g = "<<g<<endl; time K3 g);
++ ///;
++
++--- a/M2/Macaulay2/packages/MinimalPrimes/tests.m2
+++++ b/M2/Macaulay2/packages/MinimalPrimes/tests.m2
++@@ -72,6 +72,7 @@
++ ///
++
++ TEST ///
+++-- no-check-flag #1064
++ R = QQ[x,r,v,u,b, MonomialOrder=>{Lex=>5}]
++ I = ideal(b^3-7*b^2+14*b-7,r^2-u*r+(-2*b^2+9*b-5)*u^2+b^2-4*b,x^2+(b-2)*x*r+r^2+b^2-4*b)
++ elapsedTime C = minprimes(I, Verbosity=>2);
++@@ -95,6 +96,7 @@
++ ///
++
++ TEST ///
+++-- no-check-flag #1064
++ -- Over a tower of rings
++ R = QQ[b][u][x,r,v, MonomialOrder=>{Lex=>3}]
++ I = ideal(b^3-7*b^2+14*b-7,r^2-u*r+(-2*b^2+9*b-5)*u^2+b^2-4*b,x^2+(b-2)*x*r+r^2+b^2-4*b)
++@@ -1604,6 +1606,7 @@
++ ///
++
++ TEST ///
+++-- no-check-flag #1064
++ -- this test occurs as a crash in github issue #190.
++ -- seems to work after recent changes to factory.
++ -- it might be too long for a test...
++--- a/M2/Macaulay2/packages/AssociativeAlgebras/tests.m2
+++++ b/M2/Macaulay2/packages/AssociativeAlgebras/tests.m2
++@@ -810,6 +810,7 @@
++ ///
++
++ TEST ///
+++-- no-check-flag #1903
++ kk = ZZ/32003
++ R = kk<|x,y,z,w|>
++ I = ideal {x*y-y*x-7*z*w-7*w*z, 3*x*z-4*y*w-3*z*x-4*w*y, 31*x*w+25*y*z+25*z*y-31*w*x, x*y+y*x-z*w+w*z, x*z+y*w+z*x-w*y, x*w-y*z+z*y+w*x}
++@@ -1167,6 +1168,7 @@
++ ///
++
++ TEST ///
+++-- no-check-flag #1903
++ -- testing kernels
++ -*
++ restart
++@@ -1360,6 +1362,7 @@
++ ///
++
++ TEST ///
+++-- no-check-flag #1903
++ -- support tests
++ -*
++ restart
++
++--- a/M2/Macaulay2/packages/RandomGenus14Curves.m2
+++++ b/M2/Macaulay2/packages/RandomGenus14Curves.m2
++@@ -322,6 +322,7 @@
++ ///
++
++ TEST ///
+++-- no-check-architecture: arm (#2651)
++ -- check that there are not to many non-detected problems in the construction.
++ -- This code finds errors in codimension 4 with high probability
++ -- since 3^4 \approx 100
++@@ -334,6 +335,7 @@
++ ///
++
++ TEST ///
+++-- no-check-architecture: arm (#2651)
++ -- check that the certification sometimes works
++ -- (only errors in codim 1 are detected)
++ setRandomSeed("alpha")
++--- a/M2/Macaulay2/packages/Topcom.m2
+++++ b/M2/Macaulay2/packages/Topcom.m2
++@@ -1072,6 +1072,7 @@
++ ///
++
++ TEST ///
+++-- no-check-flag #2704
++ needsPackage "Topcom"
++ needsPackage "Polyhedra"
++
++--- a/M2/Macaulay2/packages/Triangulations.m2
+++++ b/M2/Macaulay2/packages/Triangulations.m2
++@@ -948,6 +948,7 @@
++ ///
++
++ TEST ///
+++-- no-check-flag #2704
++ needsPackage "Triangulations"
++ needsPackage "Polyhedra"
++
--- /dev/null
--- /dev/null
++Description: Use --memopt option when calling TOPCOM
++ Saves memory using caching to avoid example/test failures.
++Author: Doug Torrance <dtorrance@debian.org>
++Bug: https://github.com/Macaulay2/M2/issues/1707
++Bug: https://github.com/Macaulay2/M2/issues/2712
++Last-Update: 2022-12-15
++
++--- a/M2/Macaulay2/packages/Topcom.m2
+++++ b/M2/Macaulay2/packages/Topcom.m2
++@@ -317,7 +317,7 @@
++ << "Index sets do not correspond to full-dimensional simplices" << endl;
++ return false;
++ );
++- (outfile, errfile) := callTopcom("points2nflips --checktriang -v", {topcomPoints(V, Homogenize=>false), [], T });
+++ (outfile, errfile) := callTopcom("points2nflips --checktriang --memopt -v", {topcomPoints(V, Homogenize=>false), [], T });
++ not match("not valid", get errfile)
++ )
++
--- /dev/null
--- /dev/null
++Description: Set AuxiliaryFiles and UseCachedExampleOutput options to
++ true for several packages whose examples are cached because
++ generating them has been known to cause build failures on various
++ architectures. See debian/scripts/generate-examples.m2.
++Author: Doug Torrance <dtorrance@debian.org>
++Forwarded: not-needed
++Last-Update: 2021-02-20
++
++--- a/M2/Macaulay2/packages/Macaulay2Doc.m2
+++++ b/M2/Macaulay2/packages/Macaulay2Doc.m2
++@@ -6,6 +6,7 @@
++ newPackage ("Macaulay2Doc",
++ InfoDirSection => "Macaulay2 and its packages",
++ AuxiliaryFiles => true,
+++ UseCachedExampleOutput => true,
++ Headline => "Macaulay2 documentation",
++ Authors => {
++ {Name => "Daniel R. Grayson", Email => "dan@math.uiuc.edu", HomePage => "http://www.math.uiuc.edu/~dan/"},
++--- a/M2/Macaulay2/packages/SemidefiniteProgramming.m2
+++++ b/M2/Macaulay2/packages/SemidefiniteProgramming.m2
++@@ -19,6 +19,7 @@
++ Headline => "semidefinite programming",
++ Keywords => {"Real Algebraic Geometry", "Interfaces"},
++ Configuration => {"CSDPexec"=>"","MOSEKexec"=>"mosek","SDPAexec"=>"sdpa","DefaultSolver"=>null},
+++ UseCachedExampleOutput => true,
++ AuxiliaryFiles => true,
++ PackageExports => {"NumericalAlgebraicGeometry"}
++ )
--- /dev/null
--- /dev/null
++Description: Modifications to work with dh_elpa.
++ * Strip down setupEmacs() function. We only set f12 as a global key
++ to start Macaulay2 inside Emacs. This also strips (load "M2-init")
++ from a user's existing .emacs-Macaulay2 file, which would cause
++ errors if they haven't installed elpa-macaulay2. We also warn the
++ user if elpa-macaulay2 isn't installed.
++ * Fix path to M2-emacs-help.txt in documentation.
++Author: Doug Torrance <dtorrance@debian.org>
++Forwarded: not-needed
++Last-Update: 2022-02-08
++
++--- a/M2/Macaulay2/m2/files.m2
+++++ b/M2/Macaulay2/m2/files.m2
++@@ -387,12 +387,6 @@
++ ///
++
++ dotemacsFix0 = ///
++-;; this version will give an error if M2-init.el is not found:
++-(load "M2-init")
++-
++-;; this version will not give an error if M2-init.el is not found:
++-;(load "M2-init" t)
++-
++ ; You may comment out the following line with an initial semicolon if you
++ ; want to use your f12 key for something else. However, this action
++ ; will be undone the next time you run setup() or setupEmacs().
++@@ -474,10 +468,15 @@
++ setupEmacs = method()
++ setup = method()
++ mungeEmacs = () -> (
++- dotemacsFix = concatenate(emacsHeader, apply(emacsfixes, (var,dir,templ) -> fix(var,dir,"",templ)), dotemacsFix0);
+++ dotemacsFix = concatenate(emacsHeader, dotemacsFix0);
++ supplantStringFile(dotemacsFix,"~/"|M2emacs,false);
++- mungeFile("~/"|".emacs", ";; Macaulay 2 start", ";; Macaulay 2 end", M2emacsRead )
++- )
+++ ret := mungeFile("~/"|".emacs", ";; Macaulay 2 start", ";; Macaulay 2 end", M2emacsRead );
+++ if run("dpkg -s elpa-macaulay2 2> /dev/null | " |
+++ "grep -q \"^Status:.* installed\"") != 0 then
+++ stderr << "--warning: you must run \"apt install elpa-macaulay2\" "
+++ << "as root in order to use" << endl
+++ << " Macaulay2 with Emacs." << endl;
+++ ret)
++ prelim := () -> (
++ promptUser = true;
++ if prefixDirectory === null then error "can't determine Macaulay 2 prefix (prefixDirectory not set)";
++--- a/M2/Macaulay2/packages/Macaulay2Doc/ov_getting_started.m2
+++++ b/M2/Macaulay2/packages/Macaulay2Doc/ov_getting_started.m2
++@@ -926,7 +926,7 @@
++ It also provides for dynamic completion of symbols in the language.",
++ PARA{},
++ "There is an ASCII version of this section of the documentation distributed
++- in the file ", TT (Layout#1#"emacs" | "M2-emacs-help.txt"), ". It might be useful for you to visit
+++ in the file ", TT "/usr/share/doc/elpa-macaulay2/M2-emacs-help.txt.gz", ". It might be useful for you to visit
++ that file with emacs now, thereby avoiding having to cut and paste bits of
++ text into emacs buffers for the demonstrations below.",
++ PARA{},
--- /dev/null
--- /dev/null
++#!/usr/bin/make -f
++
++include /usr/share/dpkg/architecture.mk
++include /usr/share/dpkg/pkg-info.mk # for SOURCE_DATE_EPOCH
++
++export DEB_BUILD_MAINT_OPTIONS=hardening=+all optimize=-lto
++
++ifeq (,$(filter terse,$(DEB_BUILD_OPTIONS)))
++export VERBOSE=1
++endif
++
++# needed for reproducible-version.patch
++export CURDIR
++
++VERSION := $(shell cat M2/VERSION)
++
++%:
++ dh $@ --sourcedirectory=M2 --with linktree
++
++# use exec_prefix instead of prefix in libdir, as that's what's needed
++# to properly substitute paths in Layout#2
++LIBDIR := \$${exec_prefix}/lib/$(DEB_HOST_MULTIARCH)
++
++# set emacs lisp file installation directory so that the documentation
++# matches where dh_elpa installs them
++EMACSDIR := \
++ \$${prefix}/share/emacs/site-lisp/elpa/macaulay2-$(VERSION)
++
++# fix TBB linking issue on armel (https://github.com/Macaulay2/M2/pull/2528)
++ifeq ($(DEB_HOST_ARCH),armel)
++ LIBS = -latomic
++endif
++
++WITH_PYTHON := $(if $(filter nopython, $(DEB_BUILD_PROFILES)),, --with-python)
++
++ifneq (,$(filter nodoc,$(DEB_BUILD_OPTIONS)))
++DISABLE_DOCUMENTATION = --disable-documentation
++else
++DISABLE_DOCUMENTATION := $(if $(shell dh_listpackages -i),,\
++ --disable-documentation)
++endif
++
++override_dh_auto_configure:
++ dh_auto_configure -- \
++ --libdir=$(LIBDIR) \
++ --with-emacsdir=$(EMACSDIR) \
++ --with-system-memtailor \
++ --with-system-mathic \
++ --with-system-mathicgb \
++ --with-system-gc \
++ LIBS="$(LIBS)" \
++ $(WITH_PYTHON) \
++ $(DISABLE_DOCUMENTATION) \
++ $(if $(DISABLE_DOCUMENTATION),,--enable-syntax-highlighting)
++ifeq ($(DISABLE_DOCUMENTATION),)
++ dh_auto_configure --buildsystem=nodejs
++ mv node_modules M2/Macaulay2/editors/highlightjs
++endif
++
++# copy cached example output files (for examples known to fail on
++# various architectures) to source directory
++# see generateExamples in debian/scripts/Debian.m2
++EXAMPLE_SRC := $(wildcard $(CURDIR)/debian/examples/*)
++EXAMPLE_DEST := $(patsubst $(CURDIR)/debian/examples/%, \
++ $(CURDIR)/M2/Macaulay2/packages/%/examples, $(EXAMPLE_SRC))
++
++$(CURDIR)/M2/Macaulay2/packages/%/examples: $(CURDIR)/debian/examples/%
++ mkdir -p $@
++ cp -v $</*.out $@
++
++execute_before_dh_auto_build: $(EXAMPLE_DEST)
++ mkdir -p M2/Macaulay2/packages/Style/katex
++
++# since a "test" target exists, dh_auto_test defaults to using that, but
++# it just prints the values of some variables. we want the "check" target
++# instead to run the test suite
++# related: https://bugs.debian.org/924052
++override_dh_auto_test-arch:
++ $(MAKE) -C M2 check ArgumentMode="defaultMode - SetUlimit" LIMIT=
++
++ifeq ($(DISABLE_DOCUMENTATION),)
++override_dh_auto_test-indep:
++ $(MAKE) -C M2 validate-html
++endif
++
++# create dumps of package documentation databases to ship with macaulay2-common
++# and then load during postinst
++PKGLIBDIR := debian/tmp/usr/lib/$(DEB_HOST_MULTIARCH)/Macaulay2
++PKGDOCDIR := debian/tmp/usr/share/doc/Macaulay2
++DB_FILENAME := rawdocumentation-$(if \
++ $(filter little, $(DEB_HOST_ARCH_ENDIAN)),dcba,abcd)-$(if \
++ $(filter 64, $(DEB_HOST_ARCH_BITS)),8,4).db
++
++DB_FILES = $(wildcard $(PKGLIBDIR)/*/cache/$(DB_FILENAME))
++DUMP_FILES = $(DB_FILES:$(PKGLIBDIR)/%/cache/$(DB_FILENAME)=\
++ $(PKGDOCDIR)/%/dump/rawdocumentation.dump)
++
++$(PKGDOCDIR)/%/dump/rawdocumentation.dump: $(PKGLIBDIR)/%/cache/$(DB_FILENAME)
++ mkdir -p $(dir $@)
++# gdbm_load records the path of the database file and the timestamp in the
++# dump file, so use a relative path and faketime for reproducibility
++ cd $(dir $<) && \
++ faketime '@$(SOURCE_DATE_EPOCH)' \
++ gdbm_dump $(notdir $<) $(CURDIR)/$@
++
++execute_after_dh_auto_install-indep: $(DUMP_FILES)
++ rm -rf $(EXAMPLE_DEST)
++ for DIR in $(subst /examples,,$(EXAMPLE_DEST)); \
++ do if [ -z "$$(ls -A $$DIR)" ]; then rm -rf $$DIR; fi; \
++ done
++ rm -rf $(PKGLIBDIR) # remove package documentation database files
++
++# https://github.com/Macaulay2/M2/issues/1144
++execute_before_dh_link-indep:
++ jdupes -rl debian/macaulay2-common/usr/share/doc/Macaulay2
++
++# example output, package test files, and database dumps must be plain text
++override_dh_compress:
++ dh_compress -Xexample-output -X.m2 -X.dump
++
++execute_before_dh_elpa: debian/macaulay2-pkg.el
++
++debian/macaulay2-pkg.el: debian/macaulay2-pkg.el.in
++ sed -e 's|@VERSION@|$(VERSION)|g' $< > $@
++
++# prevent dh_missing from failing when only building arch-dependent packages
++execute_before_dh_missing:
++ if [ ! -f debian/macaulay2-pkg.el ]; \
++ then \
++ rm -rf debian/tmp/usr/share/emacs; \
++ fi
++
++override_dh_installdeb:
++ dh_installdeb --define DEB_HOST_MULTIARCH=$(DEB_HOST_MULTIARCH) \
++ --define DB_FILENAME=$(DB_FILENAME)
++
++# we use uscan to check for the most recent version, but to create an
++# orig tarball, we also need the contents of the M2-emacs submodule,
++# so use this target instead of uscan directly
++get-orig-source:
++ debian/scripts/m2-get-orig-source.sh
--- /dev/null
--- /dev/null
++---
++variables:
++ DEB_BUILD_OPTIONS: "nocheck nodoc"
++ SALSA_CI_GBP_BUILDPACKAGE_ARGS: "--git-hooks"
++
++include:
++ - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml
++ - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml
++
++autopkgtest:
++ allow_failure: true
--- /dev/null
--- /dev/null
++srcdir := minimizeFilename(currentFileDirectory | "../../")
++if not fileExists(srcdir | "debian/copyright") then
++ error "package must be loaded from the debian source directory"
++
++newPackage("Debian",
++ Version => get("!cd " | srcdir |
++ " && dpkg-parsechangelog -S Version | tr -d '\n'"),
++ Date => "2021-09-22",
++ Headline => "helper functions for packaging Macaulay2 for Debian",
++ Authors => {{
++ Name => "Doug Torrance",
++ Email => "dtorrance@debian.org",
++ HomePage => "https://webwork.piedmont.edu/~dtorrance"}}
++ )
++
++export {
++ "copyrightHelper",
++ "generateExample",
++ "generateExamples",
++ "missingPackages",
++ "skipTest",
++ "skipTestArch"
++ }
++
++importFrom_Core {
++ "captureExampleOutput",
++ "storeExampleOutput",
++ "toFilename",
++ "topSrcdir"
++ }
++
++getfilename := pkg -> (
++ for file in apply({"", "undistributed-packages/"}, dir ->
++ srcdir | "M2/Macaulay2/packages/" | dir | pkg | ".m2") do
++ if fileExists file then return file;
++ error "file not found")
++readpkg := pkg -> readPackage(pkg, FileName => getfilename pkg)
++
++-- no need to list packages written only by Dan and/or Mike
++danMikeRegex := {"^Jane Doe$", -- "author" of FirstPackage/SecondPackage
++ "^Daniel R\\. Grayson$",
++ "^Mi(ke|chael E\\.) Stillman$"}
++
++-- function to help generate d/copyright paragraphs for Macaulay2 packages
++-- manually check each file to ensure the license information is correct
++copyrightHelper = pkgName -> (
++ pkg := readpkg pkgName;
++ filename := getfilename pkgName;
++ files := replace(regexQuote srcdir | "(.*)\\.m2$", "\\1", filename) |
++ if pkg#AuxiliaryFiles then "*" else ".m2";
++ year := if pkg#Date =!= null then
++ (first select(///[\d]{4}///, pkg#Date)) | " " else "";
++ danOrMike := any(apply(pkg#Authors, author ->
++ last first author), name -> match(danMikeRegex, name));
++ print("Files: " | files | newline |
++ "Copyright: " |
++ demark(newline | " ",
++ apply(hashTable \ pkg#Authors, author ->
++ year | author#Name |
++ (if author#?Email then " <" | author#Email | ">" else ""))) |
++ newline | "Comment: See Comment at the top of this file." | newline |
++ "License: " | (if danOrMike then "GPL-2+ and " else "") |
++ "public-domain" | newline);
++ << flush;
++ printerr "warning: confirm that this copyright information is correct:";
++ print(filename | ":1:1:");
++)
++
++missingPackages = () -> (
++ dCopyright := get(srcdir | "debian/copyright");
++ distributedPkgs := apply(
++ select(readDirectory(srcdir | "M2/Macaulay2/packages"),
++ f -> match("\\.m2$", f)), f -> replace("\\.m2$", "", f));
++ undistributedPkgs := apply(select(readDirectory(srcdir |
++ "M2/Macaulay2/packages/undistributed-packages"),
++ f -> match("\\.m2$", f) and not member(f, {
++ -- reading any of these packages will raise an error
++ "CodepthThree.m2",
++ "CustomEngineTests.m2",
++ "FastLinearAlgebra.m2",
++ "MemoryLeaks.m2",
++ "SecondPackage.m2",
++ -- false positives
++ "RisaAsir.m2", -- author field empty
++ "SchurRingsOld.m2" -- copyright dan, not package authors
++ })), f -> replace("\\.m2$", "", f));
++ pkgs := sort(distributedPkgs | undistributedPkgs);
++ missing := select(pkgs, pkg ->
++ not match("M2/Macaulay2/packages/(undistributed-packages/)?" | pkg |
++ "(\\.m2|\\*)", dCopyright));
++ select(missing, pkg ->
++ not all(hashTable \ (readpkg pkg)#Authors, author ->
++ match(danMikeRegex, author#Name)))
++)
++
++-- from installPackage.m2
++gethash := outf -> (
++ f := get outf;
++ -- this regular expression detects the format used in runFile
++ m := regex("\\`.* hash: *(-?[0-9]+)", f);
++ if m =!= null then value substring(m#1, f));
++
++dir := minimizeFilename(currentFileDirectory | "../")
++generateExample = (pkgname, fkey) -> (
++ tmpdir := temporaryFileName();
++ makeDirectory tmpdir;
++ installdir := replace("^~", getenv "HOME", dir) | "/examples/" | pkgname;
++ makeDirectory installdir;
++ inf := tmpdir | "/" | toFilename fkey | ".m2";
++ outf := installdir | "/" | toFilename fkey | ".out";
++ errf := installdir | "/" | toFilename fkey | ".errors";
++ pkg := needsPackage(pkgname, LoadDocumentation => true);
++ if pkg#?"documentation not loaded" then pkg = loadPackage(
++ pkgname, LoadDocumentation => true, Reload => true);
++ inputs := pkg#"example inputs"#(format makeDocumentTag fkey);
++ if fileExists outf and gethash outf == hash inputs then (
++ printerr("example result for ", format fkey,
++ " already exists; skipping");
++ return false);
++ elapsedTime captureExampleOutput(
++ "example result for " | format fkey,
++ demark_newline inputs,
++ pkg,
++ inf,
++ outf,
++ errf,
++ {},
++ hash inputs,
++ () -> null,
++ false);
++ topSrcdir = "/top/src/dir/"; -- for reproduciblePaths
++ storeExampleOutput(pkg, fkey, outf, printerr);
++ true)
++
++problemExamples = {
++ -- load Macaulay2Doc first to avoid #2328
++ ("Macaulay2Doc", "applicationDirectory"), -- #1149
++ ("Macaulay2Doc", "applicationDirectorySuffix"), -- #1149
++ ("Macaulay2Doc", "getenv"), -- #1149
++ ("Macaulay2Doc", "homeDirectory"), -- #1149
++ ("SemidefiniteProgramming", "Solver") -- #1149
++}
++
++generateExamples = () -> (
++ n := 0;
++ tmp := path;
++ path = {srcdir | "/M2/Macaulay2/packages/"};
++ scan(problemExamples, (pkg, fkey) ->
++ if generateExample(pkg, fkey) then n = n + 1);
++ path = tmp;
++ ls := d -> select(readDirectory d, file -> last file != ".");
++ exdir := dir | "/examples/";
++ extraExamples := set flatten apply(ls exdir, pkg ->
++ for outf in ls(exdir | pkg) list if match ("\\.out$", outf)
++ then (pkg, outf) else continue) -
++ set apply(problemExamples, (pkg, fkey) ->
++ (pkg, toFilename fkey | ".out"));
++ if #extraExamples > 0 then error("extra cached examples: " | newline |
++ toString \\ stack \\ apply(toList extraExamples, extra ->
++ extra_0 | "::" | replace("\\.out$", "", extra_1)));
++ cachepatch := get(dir | "patches/use-cached-examples.patch");
++ missingFromPatch := select(unique \\ first \ problemExamples, pkg -> (
++ opts := readPackage(pkg, FileName => dir |
++ "../M2/Macaulay2/packages/" | pkg | ".m2");
++ not (opts.AuxiliaryFiles and
++ opts.OptionalComponentsPresent =!= null or
++ match("M2/Macaulay2/packages/" | pkg | "\\.m2", cachepatch))));
++ if #missingFromPatch > 0 then error(
++ "add these packages to d/patches/use-cached-examples.patch:" | newline |
++ toString stack missingFromPatch);
++ n)
++
++
++skipTestHelper = (i, pkgname, str) -> (
++ tmp := path;
++ path = {srcdir | "/M2/Macaulay2/packages/"};
++ run("cd " | srcdir | " && " |
++ "quilt pop -aq; " |
++ "quilt push -q skip-failing-package-tests.patch");
++ pkg := loadPackage(pkgname, LoadDocumentation => true, Reload => true);
++ path = tmp;
++ test := locate (tests pkg)#i;
++ testfile := relativizeFilename(realpath srcdir, realpath first test);
++ run("cd " | srcdir | " && quilt add " | testfile | "; " |
++ "sed -i '" | test_1 + 1 | "i " | str | "' " | testfile |
++ " && quilt refresh && quilt pop -aq");
++ )
++
++skipTest = (i, pkgname, issue) ->
++ skipTestHelper(i, pkgname, "\\-\\- no\\-check\\-flag #" | issue)
++
++skipTestArch = (i, pkgname, arch, issue) ->
++ skipTestHelper(i, pkgname, "\\-\\- no\\-check\\-architecture: " | arch |
++ " (#" | issue | ")")
++
++
++beginDocumentation()
++
++doc ///
++ Key
++ Debian
++ Headline
++ helper functions for packaging Macaulay2 for Debian
++ Description
++ Text
++ A collection of helper functions to simplify maintaining the Debian
++ package of Macaulay2.
++///
++
++doc ///
++ Key
++ missingPackages
++ Headline
++ find packages that are missing from d/copyright
++ Usage
++ missingPackages()
++ Description
++ Text
++ Check that all packages are mentioned in d/copyright unless the
++ only authors are Dan and/or Mike (or Jane Doe for FirstPackage).
++///
++
++doc ///
++ Key
++ copyrightHelper
++ Headline
++ get package license information
++ Usage
++ copyrightHelper pkg
++ Inputs
++ pkg:String
++ Description
++ Text
++ Help generate @TT "d/copyright"@ paragraphs for Macaulay2 packages.
++ Manually check each file to ensure the license information is correct.
++ Example
++ copyrightHelper "Graphs"
++///
++
++doc ///
++ Key
++ generateExample
++ Headline
++ generate cached example
++ Usage
++ generateExample(pkg, key)
++ Inputs
++ pkg:String
++ key:String
++ Description
++ Text
++ Generates the given example and saves it in @TT "d/examples/pkg"@.
++ Make sure that the @TO AuxiliaryFiles@ and
++ @TO UseCachedExampleOutput@ options to @TO installPackage@ for
++ @TT "pkg"@ are @TO true@. Otherwise, add these to
++ @TT "d/patches/use-cached-example-output.patch"@.
++///
++
++doc ///
++ Key
++ generateExamples
++ Headline
++ generate cached versions of all known problem examples
++ Usage
++ generateExamples()
++ Description
++ Text
++ Run @TO generateExample@ on every example listed in @TT "problemExamples"@
++ in the source code for this package, if necessary.
++///
++
++doc ///
++ Key
++ skipTest
++ Headline
++ skip a failing test
++ Usage
++ skipTest(i, pkg, issue)
++ Inputs
++ i:ZZ
++ pkg:String
++ issue:ZZ
++ Description
++ Text
++ Skip @TT "check(i, pkg)"@ when running package tests by adding
++ it to @TT "d/patches/skip-failing-package-tests.patch"@ using
++ @TT "no-check-flag"@ with an appropriate comment, indicated by
++ @TT "issue"@, the upstream issue number.
++///
++
++doc ///
++ Key
++ skipTestArch
++ Headline
++ skip a failing test on a specific architecture
++ Usage
++ skipTest(i, pkg, arch, issue)
++ Inputs
++ i:ZZ
++ pkg:String
++ arch:String -- matching @TO2 {"version", "version#\"architecture\""}@
++ issue:ZZ
++ Description
++ Text
++ Skip @TT "check(i, pkg)"@ when running package tests on a
++ specificic architecture by adding it to @TT
++ "d/patches/skip-failing-package-tests.patch"@ using @TT
++ "no-check-architecture"@ with an appropriate comment, indicated
++ by @TT "issue"@, the upstream issue number.
++///
--- /dev/null
--- /dev/null
++#!/bin/sh
++
++# generate Macaulay2 orig tarball for creating Debian packages
++# combines contents of M2 and M2-emacs git repositories and removes
++# any files specified by Files-Excluded in debian/copyright
++#
++# also updates git-description.patch and d/changelog with the corresponding
++# git description/version number
++
++set -e
++
++TEMP=$(getopt -o 'udr:ngmhR:' \
++ -l 'uscan,dev,ref,no-tarball,git-commit,merge,help,remote' \
++ -n "m2-get-orig-source" \
++ -- "$@")
++
++if [ $? -ne 0 ]; then
++ echo 'Terminating...' >&2
++ exit 1
++fi
++
++eval set -- "$TEMP"
++unset TEMP
++
++call_uscan() {
++ echo -n "finding newest version using uscan ... "
++ VERSION=$(uscan --report-status | grep newversion | \
++ awk '{print $3}')
++ echo $VERSION
++ REF="release-$(echo $VERSION | sed 's/~rc/-rc/')"
++}
++
++REMOTE=Macaulay2
++
++while true; do
++ case "$1" in
++ '-u'|'--uscan')
++ call_uscan
++ shift
++ continue
++ ;;
++ '-d'|'--dev')
++ REF="development"
++ shift
++ continue
++ ;;
++ '-r'|'--ref')
++ REF=$2
++ shift 2
++ continue
++ ;;
++ '-n'|'--no-tarball')
++ NOTARBALL=1
++ shift
++ continue
++ ;;
++ '-g'|'--git-commit')
++ DO_GIT_COMMIT=1
++ shift
++ continue
++ ;;
++ '-m'|'--merge')
++ MERGE=1
++ shift
++ continue
++ ;;
++ '-R'|'--remote')
++ REMOTE=$2
++ shift 2
++ continue
++ ;;
++ '-h'|'--help')
++ echo "debian/scripts/m2-get-orig-source.sh:"
++ echo " create orig tarball and update" \
++ "d/changelog (and d/p/git-description.patch) with"
++ echo " version number\n"
++ echo "options:"
++ echo " -u, --uscan"
++ echo " use uscan to determine newest stable version (default)"
++ echo " -d, --dev"
++ echo " use 'development' branch"
++ echo " -r, --ref <ref>"
++ echo " use branch or tag specificed by <ref>"
++ echo " -n, --no-tarball"
++ echo " don't generate tarball; only update d/changelog"
++ echo " -g, --git-commit"
++ echo " commit version bump to git"
++ echo " -m, --merge"
++ echo " merge branch"
++ echo " -R, --remote"
++ echo " set remote (default 'Macaulay2')"
++ echo " -h, --help"
++ echo " display this help and exit"
++ exit 0
++ ;;
++ '--')
++ shift
++ break
++ ;;
++ *)
++ echo 'Internal error!' >&2
++ exit 1
++ ;;
++ esac
++done
++
++if [ "x$REF" = "x" ]
++then
++ call_uscan
++fi
++
++if [ -z $NOTARBALL ]
++then
++ echo "making tarball for ref '$REF'"
++else
++ echo "getting version number for ref '$REF'"
++fi
++
++git fetch https://github.com/$REMOTE/M2 $REF 2> /dev/null
++
++echo -n "determining version number ... "
++GIT_VERSION=$(git show FETCH_HEAD:M2/VERSION)
++NEW_COMMITS=$(git rev-list \
++ $(git rev-list -1 FETCH_HEAD M2/VERSION)..FETCH_HEAD --count)
++GIT_COMMIT=$(git rev-parse FETCH_HEAD) # cut -c 1-7 (or 9)
++
++if [ -z $VERSION ]
++then
++ VERSION=$GIT_VERSION+git$NEW_COMMITS.$(echo $GIT_COMMIT | cut -c 1-7)
++fi
++echo $VERSION
++
++if [ $MERGE ]
++then
++ echo -n "merging '$REF' ... "
++ if git merge-base --is-ancestor FETCH_HEAD HEAD
++ then
++ echo "not needed"
++ else
++ echo
++ git merge --no-edit FETCH_HEAD
++
++ echo -n "refreshing patches ... "
++
++ REFRESH_PATCHES=
++ quilt pop -a > /dev/null 2>&1 || true
++
++ while true
++ do
++ QUILT_PUSH=$(quilt push 2> /dev/null || true)
++ if echo $QUILT_PUSH | grep "FAILED" > /dev/null
++ then
++ echo "\ncan't apply patch; refresh manually"
++ exit 1
++ elif echo $QUILT_PUSH | grep offset > /dev/null
++ then
++ quilt refresh > /dev/null
++ REFRESH_PATCHES=1
++ elif [ -z "$QUILT_PUSH" ]
++ then
++ break
++ fi
++ done
++
++ quilt pop -a > /dev/null 2>&1 || true
++
++ if [ $REFRESH_PATCHES ]
++ then
++ echo "done"
++ git add debian/patches
++ git commit -m "Refresh patches for $VERSION"
++ else
++ echo "not needed"
++ fi
++
++ echo -n "regenerating examples ... "
++ NUM_EXAMPLES=$(
++ M2 --stop --srcdir M2 --silent -e \
++ 'loadPackage("Debian", FileName => "debian/scripts/Debian.m2");
++ print generateExamples();
++ exit 0' 2> /dev/null || true)
++ if [ -z $NUM_EXAMPLES ]
++ then
++ echo "error -- M2 binary out of date?"
++ exit 1
++ else
++ echo "$NUM_EXAMPLES change(s)"
++ if [ $NUM_EXAMPLES -gt 0 ]
++ then
++ git add debian/examples
++ git commit -m "Regenerating examples for $VERSION"
++ fi
++ fi
++
++ echo -n "checking for new packages not in d/copyright ... "
++ M2 --srcdir M2 --silent -e \
++ 'loadPackage("Debian", FileName => "debian/scripts/Debian.m2");
++ pkgs = missingPackages();
++ print(#pkgs);
++ for pkg in pkgs do print(" " | toString pkg);
++ exit 0'
++ fi
++fi
++
++CURRENT_VERSION=$(dpkg-parsechangelog | awk '/^Version:/ {print $2}')
++REPACK_SUFFIX=+ds
++DEBIAN_REVISION=-1
++FULL_VERSION=$VERSION$REPACK_SUFFIX$DEBIAN_REVISION
++
++if [ $FULL_VERSION = $CURRENT_VERSION ]
++then
++ echo "debian/changelog already up to date"
++ DO_GIT_COMMIT=
++else
++ GIT_DESCRIPTION=version-$GIT_VERSION-$NEW_COMMITS-$(echo $GIT_COMMIT | \
++ cut -c 1-9)
++ echo "using git description ... $GIT_DESCRIPTION"
++
++ echo -n "updating debian/patches/git-description.patch ... "
++ quilt push debian/patches/git-description.patch > /dev/null
++ sed -i "s/^then GIT_DESCRIPTION=.*/then GIT_DESCRIPTION=$GIT_DESCRIPTION/" \
++ M2/configure.ac
++ quilt refresh > /dev/null
++ quilt pop -a > /dev/null
++ echo "done"
++
++ echo -n "updating debian/changelog ... "
++ rm -f debian/changelog.dch # dch raises an error if backup file present
++ dch -m -b -v "$FULL_VERSION" "" 2> /dev/null
++ echo "done"
++fi
++
++if [ $DO_GIT_COMMIT ]
++then
++ git add debian/changelog debian/patches/git-description.patch
++ git commit -m "Bump to version $VERSION$DEBIAN_SUFFIX"
++fi
++
++if [ $NOTARBALL ]
++then
++ exit
++fi
++
++TARBALL=macaulay2_$VERSION$REPACK_SUFFIX.orig.tar.xz
++
++if [ -e ../$TARBALL ]
++then
++ echo "../$TARBALL already exists; exiting"
++ exit
++fi
++
++echo -n "generating M2 tarball ... "
++git archive -o ../macaulay2_$VERSION.orig.tar FETCH_HEAD
++echo "done"
++
++M2_EMACS_PATH=M2/Macaulay2/editors/emacs
++echo -n "finding M2-emacs commit ... "
++M2_EMACS_COMMIT=$(git ls-tree FETCH_HEAD -- $M2_EMACS_PATH | awk '{print $3}')
++echo $M2_EMACS_COMMIT
++
++echo -n "generating M2-emacs tarball ... "
++git submodule update --quiet --init $M2_EMACS_PATH
++cd $M2_EMACS_PATH
++git archive -o "../../../../../M2-emacs.tar" --prefix $M2_EMACS_PATH/ \
++ $M2_EMACS_COMMIT
++cd ../../../..
++git submodule deinit --quiet $M2_EMACS_PATH
++echo "done"
++
++echo -n "merging tarballs ... "
++tar --concatenate --file ../macaulay2_$VERSION.orig.tar ../M2-emacs.tar
++rm ../M2-emacs.tar
++echo "done"
++
++echo -n "removing Files-Excluded from debian/copyright ... "
++FILES_EXCLUDED=$(gawk '/^Files-Excluded:/ {print $2; flag = 1; next} \
++ /^\S/ {flag = 0} flag {print $1}' debian/copyright)
++for FILE in $FILES_EXCLUDED
++do
++ if tar -tf ../macaulay2_$VERSION.orig.tar | grep $FILE > /dev/null
++ then
++ tar --delete --wildcards --file ../macaulay2_$VERSION.orig.tar $FILE
++ else
++ MISSING_FILES="$MISSING_FILES $FILE"
++ fi
++done
++mv ../macaulay2_$VERSION.orig.tar ../macaulay2_$VERSION$REPACK_SUFFIX.orig.tar
++echo "done"
++
++if [ ! -z "$MISSING_FILES" ]
++then
++ echo "warning: in Files-Excluded but not tarball:"
++ for FILE in $MISSING_FILES
++ do
++ echo " $FILE"
++ done
++fi
++
++echo -n "compressing ... "
++xz -fz ../macaulay2_$VERSION$REPACK_SUFFIX.orig.tar
++echo "done"
++
++echo "orig tarball: ../$TARBALL"
--- /dev/null
--- /dev/null
++>&2 echo "+-----------------------------------------------------------------+"
++>&2 echo "| Do NOT use this tarball. It is missing files from the M2-emacs |"
++>&2 echo "| submodule. Instead, run 'debian/rules get-orig-source'. |"
++>&2 echo "+-----------------------------------------------------------------+"
--- /dev/null
--- /dev/null
++3.0 (quilt)
--- /dev/null
--- /dev/null
++M2/Macaulay2/editors/emacs/M2-symbols.el.gz
--- /dev/null
--- /dev/null
++# Pre-generated example code used by Macaulay2's built-in help system.
++macaulay2 source: package-does-not-install-examples [debian/examples/]
++macaulay2 source: package-does-not-install-examples [M2/Macaulay2/packages/AdjointIdeal/examples/]
++macaulay2 source: package-does-not-install-examples [M2/Macaulay2/packages/Bertini/examples/]
++macaulay2 source: package-does-not-install-examples [M2/Macaulay2/packages/ConvexInterface/examples/]
++macaulay2 source: package-does-not-install-examples [M2/Macaulay2/packages/DecomposableSparseSystems/examples/]
++macaulay2 source: package-does-not-install-examples [M2/Macaulay2/packages/MapleInterface/examples/]
++macaulay2 source: package-does-not-install-examples [M2/Macaulay2/packages/MonodromySolver/examples/]
++macaulay2 source: package-does-not-install-examples [M2/Macaulay2/packages/MonomialIntegerPrograms/examples/]
++macaulay2 source: package-does-not-install-examples [M2/Macaulay2/packages/NCAlgebra/examples/]
++macaulay2 source: package-does-not-install-examples [M2/Macaulay2/packages/NumericalSchubertCalculus/examples/]
++macaulay2 source: package-does-not-install-examples [M2/Macaulay2/packages/PHCpack/examples/]
++macaulay2 source: package-does-not-install-examples [M2/Macaulay2/packages/Python/examples/]
++macaulay2 source: package-does-not-install-examples [M2/Macaulay2/packages/Parametrization/examples/]
++macaulay2 source: package-does-not-install-examples [M2/Macaulay2/packages/OnlineLookup/examples/]
++macaulay2 source: package-does-not-install-examples [M2/Macaulay2/packages/StatePolytope/examples/]
++macaulay2 source: package-does-not-install-examples [M2/Macaulay2/packages/Tropical/examples/]
++
++# false positive - just a long paragraph with no line breaks
++macaulay2 source: source-is-missing [M2/Macaulay2/packages/WeylGroups/tutorial.html]
--- /dev/null
--- /dev/null
++extend-diff-ignore = "M2/submodules"
++extend-diff-ignore = "M2/BUILD"
++extend-diff-ignore = "M2/Macaulay2/m2/TAGS.doc"
++extend-diff-ignore = "M2/configure"
++extend-diff-ignore = "M2/include/M2/config.h.in"
--- /dev/null
--- /dev/null
++stdio << "checking if documentation database can be loaded ... "
++-- check a key containing a UTF-8 character that is known to cause problems
++-- when a gdbm database is loaded on the wrong architecture
++if (needsPackage "Macaulay2Doc")#"raw documentation database"#?"Gröbner bases"
++then (print "yes"; exit 0) else (print "no"; exit 1)
--- /dev/null
--- /dev/null
++Test-Command: M2 --silent --check 1 -q --stop -E "exit 0"
++Depends: macaulay2
++Restrictions: allow-stderr
++Features: test-name=basic-tests
++
++Test-Command: M2 --check 2
++Depends: 4ti2, gfan, macaulay2, normaliz
++Restrictions: allow-stderr
++Features: test-name=core-tests
++
++Test-Command: M2 --check 3
++Depends: 4ti2,
++ cohomcalg,
++ coinor-csdp,
++ gfan,
++ libmpfi-dev,
++ macaulay2,
++ nauty,
++ normaliz,
++ topcom
++Restrictions: allow-stderr
++Architecture: !armhf
++Features: test-name=package-tests
++
++Test-Command: M2 --script debian/tests/check-doc-db.m2
++Depends: macaulay2
++Features: test-name=database-smoke-test
--- /dev/null
--- /dev/null
++---
++Repository: https://github.com/Macaulay2/M2
++Bug-Database: https://github.com/Macaulay2/M2/issues
++Funding:
++ - NSF DMS 92-10805
++ - NSF DMS 92-10807
++ - NSF DMS 96-22608
++ - NSF DMS 96-23232
++ - NSF DMS 99-70085
++ - NSF DMS 99-70348
++ - NSF DMS 03-11378
++ - NSF DMS 03-11806
++ - NSF DMS 08-10918
++ - NSF DMS 08-10948
++ - NSF DMS 10-02171
++ - NSF DMS 10-02210
++ - NSF DMS 15-02209
++ - NSF DMS 15-02294
++ - NSF DMS 20-01206
++ - NSF DMS 20-01267
++ - NSF DMS 20-01367
++Reference:
++ Author: Grayson, Daniel R. and Stillman, Michael E.
++ Title: Macaulay2, a software system for research in algebraic geometry
++ Type: misc
++ URL: https://faculty.math.illinois.edu/Macaulay2/
++Webservice:
++ - http://web.macaulay2.com/
++ - https://www.unimelb-macaulay2.cloud.edu.au/
--- /dev/null
--- /dev/null
++version=4
++opts=dversionmangle=s/@DEB_EXT@//,repacksuffix=+ds,uversionmangle=s/-rc/~rc/ \
++https://github.com/Macaulay2/M2/tags .*/release-@ANY_VERSION@@ARCHIVE_EXT@ \
++debian debian/scripts/m2-tarball-warning.sh
projects / macaulay2.git / commitdiff