They were missing dependencies (needed for the compile_test).
The home directory needed to be moved in order to avoid a "permission denied"
error..
-Test-Command: cd tests && make -C pysam_data && make -C cbcf_data && nosetests --nocapture -v
+Test-Command: export HOME=$ADTTMP; cd tests && make -C pysam_data && make -C cbcf_data && nosetests --nocapture -v
Depends:
build-essential,
cython,
python-dev,
+ libhts-dev,
+ zlib1g-dev,
python-pysam,
python-nose,
tabix,
bcftools
Restrictions: allow-stderr, rw-build-tree
-Test-Command: cd tests && make -C pysam_data && make -C cbcf_data && nosetests3 --nocapture -v
+Test-Command: export HOME=$ADTTMP; cd tests && make -C pysam_data && make -C cbcf_data && nosetests3 --nocapture -v
Depends:
build-essential,
cython3,
python3-dev,
+ libhts-dev,
+ zlib1g-dev,
python3-pysam,
python3-nose,
tabix,