dgit.raspbian.org Git - python-pysam.git/commit

author	Charles Plessy <plessy@debian.org>
	Fri, 9 Aug 2013 09:34:40 +0000 (18:34 +0900)
committer	Charles Plessy <plessy@debian.org>
	Fri, 9 Aug 2013 09:34:40 +0000 (18:34 +0900)
commit	fabbcdc720f13bfdd948bff8ec3fdd6381f5a940
tree	0a3798f94ddda10877d3aa7108f2a3d12b4e6ec2	tree \| snapshot
parent	356c1c89be26c412e68323cc506e42159ff4b74d	commit \| diff

Imported Upstream version 0.7.5

78 files changed:

MANIFEST.in		diff \| blob \| history
PKG-INFO		diff \| blob \| history
doc/Makefile	[new file with mode: 0644]	blob
doc/api.rst	[new file with mode: 0644]	blob
doc/conf.py	[new file with mode: 0644]	blob
doc/contents.rst	[new file with mode: 0644]	blob
doc/developer.rst	[new file with mode: 0644]	blob
doc/faq.rst	[new file with mode: 0644]	blob
doc/glossary.rst	[new file with mode: 0644]	blob
doc/make.bat	[new file with mode: 0644]	blob
doc/release.rst	[new file with mode: 0644]	blob
doc/usage.rst	[new file with mode: 0644]	blob
pysam.egg-info/PKG-INFO		diff \| blob \| history
pysam.egg-info/SOURCES.txt		diff \| blob \| history
pysam.py	[new file with mode: 0644]	blob
pysam/TabProxies.c		diff \| blob \| history
pysam/__init__.py		diff \| blob \| history
pysam/csamtools.c		diff \| blob \| history
pysam/csamtools.pyx		diff \| blob \| history
pysam/ctabix.c		diff \| blob \| history
pysam/ctabix.pxd		diff \| blob \| history
pysam/ctabix.pyx		diff \| blob \| history
pysam/cvcf.c		diff \| blob \| history
pysam/cvcf.pyx		diff \| blob \| history
pysam/pysam_util.c		diff \| blob \| history
pysam/tabix_util.h	[new file with mode: 0644]	blob
pysam/version.py		diff \| blob \| history
samtools/bam.c.pysam.c		diff \| blob \| history
samtools/bam.h		diff \| blob \| history
samtools/bam2bcf.c.pysam.c		diff \| blob \| history
samtools/bam2bcf.h		diff \| blob \| history
samtools/bam2bcf_indel.c.pysam.c		diff \| blob \| history
samtools/bam2depth.c.pysam.c		diff \| blob \| history
samtools/bam_aux.c.pysam.c		diff \| blob \| history
samtools/bam_cat.c.pysam.c		diff \| blob \| history
samtools/bam_color.c.pysam.c		diff \| blob \| history
samtools/bam_import.c.pysam.c		diff \| blob \| history
samtools/bam_index.c.pysam.c		diff \| blob \| history
samtools/bam_mate.c.pysam.c		diff \| blob \| history
samtools/bam_md.c.pysam.c		diff \| blob \| history
samtools/bam_plcmd.c.pysam.c		diff \| blob \| history
samtools/bam_reheader.c.pysam.c		diff \| blob \| history
samtools/bam_sort.c.pysam.c		diff \| blob \| history
samtools/bam_tview.c.pysam.c		diff \| blob \| history
samtools/bam_tview.h	[new file with mode: 0644]	blob
samtools/bam_tview_curses.c.pysam.c	[new file with mode: 0644]	blob
samtools/bam_tview_html.c.pysam.c	[new file with mode: 0644]	blob
samtools/bamshuf.c.pysam.c	[new file with mode: 0644]	blob
samtools/bcftools/bcf.c.pysam.c		diff \| blob \| history
samtools/bcftools/bcf.h		diff \| blob \| history
samtools/bcftools/bcfutils.c.pysam.c		diff \| blob \| history
samtools/bcftools/call1.c.pysam.c		diff \| blob \| history
samtools/bcftools/index.c.pysam.c		diff \| blob \| history
samtools/bcftools/prob1.c.pysam.c		diff \| blob \| history
samtools/bcftools/prob1.h		diff \| blob \| history
samtools/bcftools/vcf.c.pysam.c		diff \| blob \| history
samtools/bedcov.c.pysam.c	[new file with mode: 0644]	blob
samtools/bgzf.c.pysam.c		diff \| blob \| history
samtools/bgzf.h		diff \| blob \| history
samtools/faidx.c.pysam.c		diff \| blob \| history
samtools/kprobaln.c.pysam.c		diff \| blob \| history
samtools/kseq.h		diff \| blob \| history
samtools/ksort.h		diff \| blob \| history
samtools/kstring.c.pysam.c		diff \| blob \| history
samtools/kstring.h		diff \| blob \| history
samtools/misc/ace2sam.c.pysam.c	[new file with mode: 0644]	blob
samtools/misc/seqtk.c.pysam.c	[deleted file]	blob \| history
samtools/padding.c.pysam.c	[new file with mode: 0644]	blob
samtools/sam.c.pysam.c		diff \| blob \| history
samtools/sam.h		diff \| blob \| history
samtools/sam_header.c.pysam.c		diff \| blob \| history
samtools/sam_header.h		diff \| blob \| history
samtools/sam_view.c.pysam.c		diff \| blob \| history
setup.py		diff \| blob \| history
tests/Makefile		diff \| blob \| history
tests/pysam_test.py		diff \| blob \| history
tests/tabix_test.py		diff \| blob \| history
tests/test_unaligned.bam	[new file with mode: 0644]	blob

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