dgit.raspbian.org Git - python-pysam.git/commit

author	Afif Elghraoui <afif@debian.org>
	Tue, 24 Jan 2017 03:09:05 +0000 (19:09 -0800)
committer	Afif Elghraoui <afif@debian.org>
	Tue, 24 Jan 2017 03:09:05 +0000 (19:09 -0800)
commit	dadf905780b2c683a23346e1eece6aa56717ca88
tree	0c786f5bf4d6de203b043cc23345f52d346cdae9	tree \| snapshot
parent	6528922f1d45d0364eefc4c80ad2fce35f885570	commit \| diff

Imported Upstream version 0.10.0+ds

71 files changed:

.travis.yml		diff \| blob \| history
bcftools/vcfisec.c		diff \| blob \| history
bcftools/vcfisec.c.pysam.c		diff \| blob \| history
benchmark/cython_flagstat.py	[new file with mode: 0644]	blob
benchmark/python_flagstat.py	[new file with mode: 0644]	blob
buildwheels.sh	[new file with mode: 0755]	blob
cy_build.py		diff \| blob \| history
doc/api.rst		diff \| blob \| history
doc/release.rst		diff \| blob \| history
doc/usage.rst		diff \| blob \| history
pysam/__init__.py		diff \| blob \| history
pysam/calignedsegment.pxd	[deleted file]	blob \| history
pysam/calignedsegment.pyx	[deleted file]	blob \| history
pysam/calignmentfile.pxd	[deleted file]	blob \| history
pysam/calignmentfile.pyx	[deleted file]	blob \| history
pysam/cbcf.pxd	[deleted file]	blob \| history
pysam/cbcf.pyx	[deleted file]	blob \| history
pysam/cfaidx.pxd	[deleted file]	blob \| history
pysam/cfaidx.pyx	[deleted file]	blob \| history
pysam/chtslib.pxd	[deleted file]	blob \| history
pysam/chtslib.pyx	[deleted file]	blob \| history
pysam/csamfile.pxd	[deleted file]	blob \| history
pysam/csamfile.pyx	[deleted file]	blob \| history
pysam/ctabix.pxd	[deleted file]	blob \| history
pysam/ctabix.pyx	[deleted file]	blob \| history
pysam/ctabixproxies.pxd	[deleted file]	blob \| history
pysam/ctabixproxies.pyx	[deleted file]	blob \| history
pysam/cutils.pxd	[deleted file]	blob \| history
pysam/cutils.pyx	[deleted file]	blob \| history
pysam/cvcf.pxd	[deleted file]	blob \| history
pysam/cvcf.pyx	[deleted file]	blob \| history
pysam/libcalignedsegment.pxd	[new file with mode: 0644]	blob
pysam/libcalignedsegment.pyx	[new file with mode: 0644]	blob
pysam/libcalignmentfile.pxd	[new file with mode: 0644]	blob
pysam/libcalignmentfile.pyx	[new file with mode: 0644]	blob
pysam/libcbcf.pxd	[new file with mode: 0644]	blob
pysam/libcbcf.pyx	[new file with mode: 0644]	blob
pysam/libcbgzf.pyx	[new file with mode: 0644]	blob
pysam/libcfaidx.pxd	[new file with mode: 0644]	blob
pysam/libcfaidx.pyx	[new file with mode: 0644]	blob
pysam/libchtslib.pxd	[new file with mode: 0644]	blob
pysam/libchtslib.pyx	[new file with mode: 0644]	blob
pysam/libcsamfile.pxd	[new file with mode: 0644]	blob
pysam/libcsamfile.pyx	[new file with mode: 0644]	blob
pysam/libctabix.pxd	[new file with mode: 0644]	blob
pysam/libctabix.pyx	[new file with mode: 0644]	blob
pysam/libctabixproxies.pxd	[new file with mode: 0644]	blob
pysam/libctabixproxies.pyx	[new file with mode: 0644]	blob
pysam/libcutils.pxd	[new file with mode: 0644]	blob
pysam/libcutils.pyx	[new file with mode: 0644]	blob
pysam/libcvcf.pxd	[new file with mode: 0644]	blob
pysam/libcvcf.pyx	[new file with mode: 0644]	blob
pysam/utils.py		diff \| blob \| history
pysam/version.py		diff \| blob \| history
requirements.txt		diff \| blob \| history
run_tests_travis.sh		diff \| blob \| history
samtools/sam_view.c.pysam.c		diff \| blob \| history
setup.py		diff \| blob \| history
tests/AlignedSegment_test.py		diff \| blob \| history
tests/AlignmentFile_test.py		diff \| blob \| history
tests/SamFile_test.py		diff \| blob \| history
tests/StreamFiledescriptors_test.py	[new file with mode: 0644]	blob
tests/VariantFile_test.py		diff \| blob \| history
tests/_compile_test.pyx		diff \| blob \| history
tests/_cython_flagstat.pyx		diff \| blob \| history
tests/cython_flagstat.py	[deleted file]	blob \| history
tests/pysam_data/Makefile		diff \| blob \| history
tests/pysam_data/ex3.sam		diff \| blob \| history
tests/pysam_data/ex_spliced.sam	[new file with mode: 0644]	blob
tests/python_flagstat.py	[deleted file]	blob \| history
tests/samtools_test.py		diff \| blob \| history

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