Import nipy_0.4.1.orig.tar.gz
authorYaroslav Halchenko <debian@onerussian.com>
Mon, 31 Jul 2017 01:20:58 +0000 (02:20 +0100)
committerYaroslav Halchenko <debian@onerussian.com>
Mon, 31 Jul 2017 01:20:58 +0000 (02:20 +0100)
commitc4b76b6c1d278bb8662326de6c7679b28311c6a4
tree01421e118ae2230656614bd3f80153347fdc0c87
Import nipy_0.4.1.orig.tar.gz

[dgit import orig nipy_0.4.1.orig.tar.gz]
745 files changed:
.coveragerc [new file with mode: 0644]
.gitattributes [new file with mode: 0644]
.gitignore [new file with mode: 0644]
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.travis.yml [new file with mode: 0644]
AUTHOR [new file with mode: 0644]
Changelog [new file with mode: 0644]
LICENSE [new file with mode: 0644]
MANIFEST.in [new file with mode: 0644]
Makefile [new file with mode: 0644]
README.rst [new file with mode: 0644]
THANKS [new file with mode: 0644]
doc/.gitignore [new file with mode: 0644]
doc/Makefile [new file with mode: 0644]
doc/README.txt [new file with mode: 0644]
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doc/_static/reggie2.png [new file with mode: 0644]
doc/_templates/layout.html [new file with mode: 0644]
doc/api/index.rst [new file with mode: 0644]
doc/bibtex/README.txt [new file with mode: 0644]
doc/bibtex/vtk.bib [new file with mode: 0644]
doc/conf.py [new file with mode: 0644]
doc/devel/code_discussions/brainvisa_repositories.rst [new file with mode: 0644]
doc/devel/code_discussions/comparisons/index.rst [new file with mode: 0644]
doc/devel/code_discussions/comparisons/vtk_datasets.rst [new file with mode: 0644]
doc/devel/code_discussions/coordmap_notes.rst [new file with mode: 0644]
doc/devel/code_discussions/image_ordering.rst [new file with mode: 0644]
doc/devel/code_discussions/index.rst [new file with mode: 0644]
doc/devel/code_discussions/pipelining_api.rst [new file with mode: 0644]
doc/devel/code_discussions/refactoring/imagelists.rst [new file with mode: 0644]
doc/devel/code_discussions/refactoring/index.rst [new file with mode: 0644]
doc/devel/code_discussions/registration_api.rst [new file with mode: 0644]
doc/devel/code_discussions/repository_api.rst [new file with mode: 0644]
doc/devel/code_discussions/repository_design.rst [new file with mode: 0644]
doc/devel/code_discussions/simple_viewer.rst [new file with mode: 0644]
doc/devel/code_discussions/understanding_affines.rst [new file with mode: 0644]
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doc/devel/code_discussions/usecases/resampling.rst [new file with mode: 0644]
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doc/devel/install/windows.rst [new file with mode: 0644]
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doc/devel/planning/TODO.rst [new file with mode: 0644]
doc/devel/planning/index.rst [new file with mode: 0644]
doc/devel/planning/roadmap.rst [new file with mode: 0644]
doc/devel/tools/index.rst [new file with mode: 0644]
doc/devel/tools/tricked_out_emacs.rst [new file with mode: 0644]
doc/devel/tools/virtualenv-tutor.rst [new file with mode: 0644]
doc/documentation.rst [new file with mode: 0644]
doc/faq/documentation_faq.rst [new file with mode: 0644]
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doc/glossary.rst [new file with mode: 0644]
doc/history.rst [new file with mode: 0644]
doc/index.rst [new file with mode: 0644]
doc/labs/datasets.rst [new file with mode: 0644]
doc/labs/datasets/viz_volume_data.py [new file with mode: 0644]
doc/labs/datasets/viz_volume_field.py [new file with mode: 0644]
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doc/labs/enn.rst [new file with mode: 0644]
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doc/labs/plots/enn_demo.py [new file with mode: 0644]
doc/labs/plots/surrogate_array.py [new file with mode: 0644]
doc/labs/simul_activation.rst [new file with mode: 0644]
doc/labs/viz.png [new file with mode: 0644]
doc/labs/viz.rst [new file with mode: 0644]
doc/license.rst [new file with mode: 0644]
doc/links_names.txt [new file with mode: 0644]
doc/mission.rst [new file with mode: 0644]
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doc/references/brainpy_abstract.rst [new file with mode: 0644]
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doc/sphinxext/ipython_console_highlighting.py [new file with mode: 0644]
doc/sphinxext/numpy_ext/__init__.py [new file with mode: 0644]
doc/sphinxext/numpy_ext/docscrape.py [new file with mode: 0644]
doc/sphinxext/numpy_ext/docscrape_sphinx.py [new file with mode: 0644]
doc/sphinxext/numpy_ext/numpydoc.py [new file with mode: 0644]
doc/users/basic_io.rst [new file with mode: 0644]
doc/users/coordinate_map.rst [new file with mode: 0644]
doc/users/glm_spec.rst [new file with mode: 0644]
doc/users/index.rst [new file with mode: 0644]
doc/users/install_data.rst [new file with mode: 0644]
doc/users/installation.rst [new file with mode: 0644]
doc/users/introduction.rst [new file with mode: 0644]
doc/users/math_coordmap.rst [new file with mode: 0644]
doc/users/plots/amplitudes.py [new file with mode: 0644]
doc/users/plots/block.py [new file with mode: 0644]
doc/users/plots/event.py [new file with mode: 0644]
doc/users/plots/event_amplitude.py [new file with mode: 0644]
doc/users/plots/hrf.py [new file with mode: 0644]
doc/users/plots/hrf_delta.py [new file with mode: 0644]
doc/users/plots/hrf_different.py [new file with mode: 0644]
doc/users/plots/neuronal_block.py [new file with mode: 0644]
doc/users/plots/neuronal_event.py [new file with mode: 0644]
doc/users/plots/random_amplitudes.py [new file with mode: 0644]
doc/users/plots/random_amplitudes_times.py [new file with mode: 0644]
doc/users/plots/sinusoidal.py [new file with mode: 0644]
doc/users/scipy_orientation.rst [new file with mode: 0644]
doc/users/tutorial.rst [new file with mode: 0644]
examples/affine_registration.py [new file with mode: 0755]
examples/algorithms/README.txt [new file with mode: 0644]
examples/algorithms/bayesian_gaussian_mixtures.py [new file with mode: 0755]
examples/algorithms/clustering_comparisons.py [new file with mode: 0755]
examples/algorithms/gaussian_mixture_models.py [new file with mode: 0755]
examples/algorithms/mixed_effects.py [new file with mode: 0644]
examples/algorithms/ward_clustering.py [new file with mode: 0755]
examples/compute_fmri_contrast.py [new file with mode: 0755]
examples/core/parcel_generator.py [new file with mode: 0644]
examples/create_tempimage.py [new file with mode: 0755]
examples/data/README_mni_basal_ganglia.rst [new file with mode: 0644]
examples/data/mni_basal_ganglia.nii.gz [new file with mode: 0644]
examples/data_package/README.txt [new file with mode: 0644]
examples/ds105/ds105_example.py [new file with mode: 0644]
examples/ds105/ds105_util.py [new file with mode: 0644]
examples/ds105/parallel_run.py [new file with mode: 0644]
examples/ds105/view_contrasts_3d.py [new file with mode: 0755]
examples/fiac/README.txt [new file with mode: 0644]
examples/fiac/fiac_example.py [new file with mode: 0644]
examples/fiac/fiac_hashes.txt [new file with mode: 0644]
examples/fiac/fiac_util.py [new file with mode: 0644]
examples/fiac/parallel_run.py [new file with mode: 0644]
examples/fiac/view_contrasts_3d.py [new file with mode: 0755]
examples/formula/fir.py [new file with mode: 0755]
examples/formula/multi_session_contrast.py [new file with mode: 0755]
examples/formula/parametric_design.py [new file with mode: 0755]
examples/formula/simple_contrast.py [new file with mode: 0755]
examples/image_from_array.py [new file with mode: 0755]
examples/interfaces/process_ds105.py [new file with mode: 0755]
examples/interfaces/process_fiac.py [new file with mode: 0755]
examples/labs/bayesian_structural_analysis.py [new file with mode: 0755]
examples/labs/blob_extraction.py [new file with mode: 0755]
examples/labs/demo_dmtx.py [new file with mode: 0755]
examples/labs/example_glm.py [new file with mode: 0755]
examples/labs/glm_lowlevel.py [new file with mode: 0755]
examples/labs/group_reproducibility_analysis.py [new file with mode: 0755]
examples/labs/hierarchical_rois.py [new file with mode: 0755]
examples/labs/histogram_fits.py [new file with mode: 0755]
examples/labs/multi_subject_parcellation.py [new file with mode: 0755]
examples/labs/need_data/bayesian_structural_analysis.py [new file with mode: 0755]
examples/labs/need_data/demo_blob_from_image.py [new file with mode: 0755]
examples/labs/need_data/demo_roi.py [new file with mode: 0755]
examples/labs/need_data/demo_ward_clustering.py [new file with mode: 0755]
examples/labs/need_data/example_roi_and_glm.py [new file with mode: 0755]
examples/labs/need_data/first_level_fiac.py [new file with mode: 0755]
examples/labs/need_data/get_data_light.py [new file with mode: 0755]
examples/labs/need_data/glm_beta_and_variance.py [new file with mode: 0644]
examples/labs/need_data/group_reproducibility_analysis.py [new file with mode: 0755]
examples/labs/need_data/histogram_fits.py [new file with mode: 0755]
examples/labs/need_data/localizer_glm_ar.py [new file with mode: 0755]
examples/labs/need_data/one_sample_t_test.py [new file with mode: 0644]
examples/labs/need_data/parcel_intra.py [new file with mode: 0755]
examples/labs/need_data/parcel_multisubj.py [new file with mode: 0755]
examples/labs/need_data/permutation_test.py [new file with mode: 0755]
examples/labs/need_data/plot_registration.py [new file with mode: 0755]
examples/labs/need_data/tmin_statistic.py [new file with mode: 0644]
examples/labs/need_data/viz.py [new file with mode: 0755]
examples/labs/need_data/viz3d.py [new file with mode: 0644]
examples/labs/onesample_group.py [new file with mode: 0755]
examples/labs/permutation_test_fakedata.py [new file with mode: 0755]
examples/labs/two_sample_mixed_effects.py [new file with mode: 0755]
examples/labs/watershed_labeling.py [new file with mode: 0755]
examples/labs/write_paradigm_file.py [new file with mode: 0755]
examples/parcel_group_analysis.py [new file with mode: 0755]
examples/space_time_realign.py [new file with mode: 0755]
examples/tissue_classification.py [new file with mode: 0755]
lib/fff/fff_array.c [new file with mode: 0644]
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lib/lapack_lite/blas_lite.c [new file with mode: 0644]
lib/lapack_lite/dlamch.c [new file with mode: 0644]
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lib/lapack_lite/f2c_lite.c [new file with mode: 0644]
lib/lapack_lite/remake/README [new file with mode: 0644]
lib/lapack_lite/remake/make_lite.py [new file with mode: 0755]
lib/lapack_lite/remake/wrapped_routines.txt [new file with mode: 0644]
nipy/COMMIT_INFO.txt [new file with mode: 0644]
nipy/__init__.py [new file with mode: 0644]
nipy/algorithms/__init__.py [new file with mode: 0644]
nipy/algorithms/clustering/__init__.py [new file with mode: 0644]
nipy/algorithms/clustering/bgmm.py [new file with mode: 0644]
nipy/algorithms/clustering/ggmixture.py [new file with mode: 0644]
nipy/algorithms/clustering/gmm.py [new file with mode: 0644]
nipy/algorithms/clustering/hierarchical_clustering.py [new file with mode: 0644]
nipy/algorithms/clustering/imm.py [new file with mode: 0644]
nipy/algorithms/clustering/setup.py [new file with mode: 0644]
nipy/algorithms/clustering/tests/__init__.py [new file with mode: 0644]
nipy/algorithms/clustering/tests/test_bgmm.py [new file with mode: 0644]
nipy/algorithms/clustering/tests/test_clustering.py [new file with mode: 0644]
nipy/algorithms/clustering/tests/test_ggm.py [new file with mode: 0644]
nipy/algorithms/clustering/tests/test_gmm.py [new file with mode: 0644]
nipy/algorithms/clustering/tests/test_hierarchical_clustering.py [new file with mode: 0644]
nipy/algorithms/clustering/tests/test_imm.py [new file with mode: 0644]
nipy/algorithms/clustering/tests/test_vmm.py [new file with mode: 0644]
nipy/algorithms/clustering/utils.py [new file with mode: 0644]
nipy/algorithms/clustering/von_mises_fisher_mixture.py [new file with mode: 0644]
nipy/algorithms/diagnostics/__init__.py [new file with mode: 0644]
nipy/algorithms/diagnostics/commands.py [new file with mode: 0644]
nipy/algorithms/diagnostics/screens.py [new file with mode: 0644]
nipy/algorithms/diagnostics/setup.py [new file with mode: 0644]
nipy/algorithms/diagnostics/tests/__init__.py [new file with mode: 0644]
nipy/algorithms/diagnostics/tests/data/generate_tsdiff_results.m [new file with mode: 0644]
nipy/algorithms/diagnostics/tests/data/timediff.m [new file with mode: 0644]
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nipy/algorithms/diagnostics/tests/test_commands.py [new file with mode: 0644]
nipy/algorithms/diagnostics/tests/test_screen.py [new file with mode: 0644]
nipy/algorithms/diagnostics/tests/test_time_difference.py [new file with mode: 0644]
nipy/algorithms/diagnostics/timediff.py [new file with mode: 0644]
nipy/algorithms/diagnostics/tsdiffplot.py [new file with mode: 0644]
nipy/algorithms/fwhm.py [new file with mode: 0644]
nipy/algorithms/graph/__init__.py [new file with mode: 0644]
nipy/algorithms/graph/_graph.c [new file with mode: 0644]
nipy/algorithms/graph/_graph.pyx [new file with mode: 0644]
nipy/algorithms/graph/bipartite_graph.py [new file with mode: 0644]
nipy/algorithms/graph/field.py [new file with mode: 0644]
nipy/algorithms/graph/forest.py [new file with mode: 0644]
nipy/algorithms/graph/graph.py [new file with mode: 0644]
nipy/algorithms/graph/setup.py [new file with mode: 0644]
nipy/algorithms/graph/tests/__init__.py [new file with mode: 0644]
nipy/algorithms/graph/tests/test_bipartite_graph.py [new file with mode: 0644]
nipy/algorithms/graph/tests/test_field.py [new file with mode: 0644]
nipy/algorithms/graph/tests/test_forest.py [new file with mode: 0644]
nipy/algorithms/graph/tests/test_graph.py [new file with mode: 0644]
nipy/algorithms/group/__init__.py [new file with mode: 0644]
nipy/algorithms/group/parcel_analysis.py [new file with mode: 0644]
nipy/algorithms/group/setup.py [new file with mode: 0644]
nipy/algorithms/group/tests/__init__.py [new file with mode: 0644]
nipy/algorithms/group/tests/test_parcel_analysis.py [new file with mode: 0644]
nipy/algorithms/interpolation.py [new file with mode: 0644]
nipy/algorithms/kernel_smooth.py [new file with mode: 0644]
nipy/algorithms/optimize.py [new file with mode: 0644]
nipy/algorithms/registration/NOTES_ELF [new file with mode: 0644]
nipy/algorithms/registration/TODO.txt [new file with mode: 0644]
nipy/algorithms/registration/__init__.py [new file with mode: 0644]
nipy/algorithms/registration/_registration.c [new file with mode: 0644]
nipy/algorithms/registration/_registration.h [new file with mode: 0644]
nipy/algorithms/registration/_registration.pyx [new file with mode: 0644]
nipy/algorithms/registration/affine.py [new file with mode: 0644]
nipy/algorithms/registration/chain_transform.py [new file with mode: 0644]
nipy/algorithms/registration/cubic_spline.c [new file with mode: 0644]
nipy/algorithms/registration/cubic_spline.h [new file with mode: 0644]
nipy/algorithms/registration/groupwise_registration.py [new file with mode: 0644]
nipy/algorithms/registration/histogram_registration.py [new file with mode: 0644]
nipy/algorithms/registration/joint_histogram.c [new file with mode: 0644]
nipy/algorithms/registration/joint_histogram.h [new file with mode: 0644]
nipy/algorithms/registration/optimizer.py [new file with mode: 0644]
nipy/algorithms/registration/polyaffine.c [new file with mode: 0644]
nipy/algorithms/registration/polyaffine.h [new file with mode: 0644]
nipy/algorithms/registration/polyaffine.py [new file with mode: 0644]
nipy/algorithms/registration/resample.py [new file with mode: 0644]
nipy/algorithms/registration/scripting.py [new file with mode: 0644]
nipy/algorithms/registration/setup.py [new file with mode: 0644]
nipy/algorithms/registration/similarity_measures.py [new file with mode: 0644]
nipy/algorithms/registration/tests/__init__.py [new file with mode: 0644]
nipy/algorithms/registration/tests/test_affine.py [new file with mode: 0644]
nipy/algorithms/registration/tests/test_chain_transforms.py [new file with mode: 0644]
nipy/algorithms/registration/tests/test_cubic_spline.py [new file with mode: 0644]
nipy/algorithms/registration/tests/test_fmri_realign4d.py [new file with mode: 0644]
nipy/algorithms/registration/tests/test_histogram_registration.py [new file with mode: 0644]
nipy/algorithms/registration/tests/test_polyaffine.py [new file with mode: 0644]
nipy/algorithms/registration/tests/test_register.py [new file with mode: 0644]
nipy/algorithms/registration/tests/test_resample.py [new file with mode: 0644]
nipy/algorithms/registration/tests/test_scripting.py [new file with mode: 0644]
nipy/algorithms/registration/tests/test_slice_timing.py [new file with mode: 0644]
nipy/algorithms/registration/tests/test_transform.py [new file with mode: 0644]
nipy/algorithms/registration/transform.py [new file with mode: 0644]
nipy/algorithms/registration/type_check.py [new file with mode: 0644]
nipy/algorithms/registration/wichmann_prng.c [new file with mode: 0644]
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nipy/algorithms/resample.py [new file with mode: 0644]
nipy/algorithms/segmentation/__init__.py [new file with mode: 0644]
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nipy/algorithms/segmentation/_segmentation.pyx [new file with mode: 0644]
nipy/algorithms/segmentation/brain_segmentation.py [new file with mode: 0644]
nipy/algorithms/segmentation/mrf.c [new file with mode: 0644]
nipy/algorithms/segmentation/mrf.h [new file with mode: 0644]
nipy/algorithms/segmentation/segmentation.py [new file with mode: 0644]
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nipy/algorithms/segmentation/tests/__init__.py [new file with mode: 0644]
nipy/algorithms/segmentation/tests/test_segmentation.py [new file with mode: 0644]
nipy/algorithms/setup.py [new file with mode: 0644]
nipy/algorithms/slicetiming/__init__.py [new file with mode: 0644]
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nipy/algorithms/slicetiming/tests/__init__.py [new file with mode: 0644]
nipy/algorithms/slicetiming/tests/test_timefuncs.py [new file with mode: 0644]
nipy/algorithms/slicetiming/timefuncs.py [new file with mode: 0644]
nipy/algorithms/statistics/__init__.py [new file with mode: 0644]
nipy/algorithms/statistics/_quantile.c [new file with mode: 0644]
nipy/algorithms/statistics/_quantile.pyx [new file with mode: 0644]
nipy/algorithms/statistics/api.py [new file with mode: 0644]
nipy/algorithms/statistics/bayesian_mixed_effects.py [new file with mode: 0644]
nipy/algorithms/statistics/bench/__init__.py [new file with mode: 0644]
nipy/algorithms/statistics/bench/bench_intvol.py [new file with mode: 0644]
nipy/algorithms/statistics/empirical_pvalue.py [new file with mode: 0644]
nipy/algorithms/statistics/formula/__init__.py [new file with mode: 0644]
nipy/algorithms/statistics/formula/formulae.py [new file with mode: 0644]
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nipy/algorithms/statistics/formula/tests/__init__.py [new file with mode: 0644]
nipy/algorithms/statistics/formula/tests/test_formula.py [new file with mode: 0644]
nipy/algorithms/statistics/histogram.c [new file with mode: 0644]
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nipy/algorithms/statistics/mixed_effects_stat.py [new file with mode: 0644]
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nipy/algorithms/statistics/models/family/family.py [new file with mode: 0644]
nipy/algorithms/statistics/models/family/links.py [new file with mode: 0644]
nipy/algorithms/statistics/models/family/varfuncs.py [new file with mode: 0644]
nipy/algorithms/statistics/models/glm.py [new file with mode: 0644]
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nipy/algorithms/statistics/models/nlsmodel.py [new file with mode: 0644]
nipy/algorithms/statistics/models/regression.py [new file with mode: 0644]
nipy/algorithms/statistics/models/setup.py [new file with mode: 0644]
nipy/algorithms/statistics/models/setupscons.py [new file with mode: 0644]
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nipy/algorithms/statistics/models/tests/exampledata.py [new file with mode: 0644]
nipy/algorithms/statistics/models/tests/test_anova.py [new file with mode: 0644]
nipy/algorithms/statistics/models/tests/test_ar.py [new file with mode: 0644]
nipy/algorithms/statistics/models/tests/test_data.bin [new file with mode: 0644]
nipy/algorithms/statistics/models/tests/test_estimable.py [new file with mode: 0644]
nipy/algorithms/statistics/models/tests/test_glm.py [new file with mode: 0644]
nipy/algorithms/statistics/models/tests/test_model.py [new file with mode: 0644]
nipy/algorithms/statistics/models/tests/test_olsR.py [new file with mode: 0644]
nipy/algorithms/statistics/models/tests/test_regression.py [new file with mode: 0644]
nipy/algorithms/statistics/models/tests/test_utils.py [new file with mode: 0644]
nipy/algorithms/statistics/models/utils.py [new file with mode: 0644]
nipy/algorithms/statistics/onesample.py [new file with mode: 0644]
nipy/algorithms/statistics/quantile.c [new file with mode: 0644]
nipy/algorithms/statistics/quantile.h [new file with mode: 0644]
nipy/algorithms/statistics/rft.py [new file with mode: 0644]
nipy/algorithms/statistics/setup.py [new file with mode: 0644]
nipy/algorithms/statistics/tests/__init__.py [new file with mode: 0644]
nipy/algorithms/statistics/tests/test_empirical_pvalue.py [new file with mode: 0644]
nipy/algorithms/statistics/tests/test_histogram.py [new file with mode: 0644]
nipy/algorithms/statistics/tests/test_intrinsic_volumes.py [new file with mode: 0644]
nipy/algorithms/statistics/tests/test_mixed_effects.py [new file with mode: 0644]
nipy/algorithms/statistics/tests/test_onesample.py [new file with mode: 0644]
nipy/algorithms/statistics/tests/test_quantile.py [new file with mode: 0644]
nipy/algorithms/statistics/tests/test_rft.py [new file with mode: 0644]
nipy/algorithms/statistics/tests/test_utils.py [new file with mode: 0644]
nipy/algorithms/statistics/utils.py [new file with mode: 0644]
nipy/algorithms/tests/__init__.py [new file with mode: 0644]
nipy/algorithms/tests/test_interpolator.py [new file with mode: 0644]
nipy/algorithms/tests/test_kernel_smooth.py [new file with mode: 0644]
nipy/algorithms/tests/test_resample.py [new file with mode: 0644]
nipy/algorithms/utils/__init__.py [new file with mode: 0644]
nipy/algorithms/utils/fast_distance.py [new file with mode: 0644]
nipy/algorithms/utils/matrices.py [new file with mode: 0644]
nipy/algorithms/utils/pca.py [new file with mode: 0644]
nipy/algorithms/utils/setup.py [new file with mode: 0644]
nipy/algorithms/utils/tests/__init__.py [new file with mode: 0644]
nipy/algorithms/utils/tests/test_fast_distance.py [new file with mode: 0644]
nipy/algorithms/utils/tests/test_matrices.py [new file with mode: 0644]
nipy/algorithms/utils/tests/test_pca.py [new file with mode: 0644]
nipy/algorithms/utils/tests/test_pca_image.py [new file with mode: 0644]
nipy/core/__init__.py [new file with mode: 0644]
nipy/core/api.py [new file with mode: 0644]
nipy/core/image/__init__.py [new file with mode: 0644]
nipy/core/image/image.py [new file with mode: 0644]
nipy/core/image/image_list.py [new file with mode: 0644]
nipy/core/image/image_spaces.py [new file with mode: 0644]
nipy/core/image/roi.py [new file with mode: 0644]
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nipy/core/image/tests/test_image.py [new file with mode: 0644]
nipy/core/image/tests/test_image_list.py [new file with mode: 0644]
nipy/core/image/tests/test_image_spaces.py [new file with mode: 0644]
nipy/core/image/tests/test_rollimg.py [new file with mode: 0644]
nipy/core/reference/__init__.py [new file with mode: 0644]
nipy/core/reference/array_coords.py [new file with mode: 0644]
nipy/core/reference/coordinate_map.py [new file with mode: 0644]
nipy/core/reference/coordinate_system.py [new file with mode: 0644]
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nipy/core/reference/tests/__init__.py [new file with mode: 0644]
nipy/core/reference/tests/matrix_groups.py [new file with mode: 0644]
nipy/core/reference/tests/test_array_coords.py [new file with mode: 0644]
nipy/core/reference/tests/test_coordinate_map.py [new file with mode: 0644]
nipy/core/reference/tests/test_coordinate_system.py [new file with mode: 0644]
nipy/core/reference/tests/test_matrix_groups.py [new file with mode: 0644]
nipy/core/reference/tests/test_parametrized_surface.py [new file with mode: 0644]
nipy/core/reference/tests/test_slices.py [new file with mode: 0644]
nipy/core/reference/tests/test_spaces.py [new file with mode: 0644]
nipy/core/setup.py [new file with mode: 0644]
nipy/core/utils/__init__.py [new file with mode: 0644]
nipy/core/utils/generators.py [new file with mode: 0644]
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nipy/core/utils/tests/test_generators.py [new file with mode: 0644]
nipy/externals/__init__.py [new file with mode: 0644]
nipy/externals/argparse.py [new file with mode: 0644]
nipy/externals/configobj.py [new file with mode: 0644]
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nipy/externals/transforms3d/__init__.py [new file with mode: 0644]
nipy/externals/transforms3d/quaternions.py [new file with mode: 0644]
nipy/externals/transforms3d/setup.py [new file with mode: 0644]
nipy/externals/transforms3d/taitbryan.py [new file with mode: 0644]
nipy/externals/transforms3d/tests/__init__.py [new file with mode: 0644]
nipy/externals/transforms3d/tests/samples.py [new file with mode: 0644]
nipy/externals/transforms3d/tests/test_quaternions.py [new file with mode: 0644]
nipy/externals/transforms3d/tests/test_taitbryan.py [new file with mode: 0644]
nipy/externals/transforms3d/utils.py [new file with mode: 0644]
nipy/externals/validate.py [new file with mode: 0644]
nipy/fixes/README.txt [new file with mode: 0644]
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nipy/fixes/scipy/ndimage/__init__.py [new file with mode: 0644]
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nipy/info.py [new file with mode: 0644]
nipy/interfaces/__init__.py [new file with mode: 0644]
nipy/interfaces/matlab.py [new file with mode: 0644]
nipy/interfaces/setup.py [new file with mode: 0644]
nipy/interfaces/spm.py [new file with mode: 0644]
nipy/interfaces/tests/__init__.py [new file with mode: 0644]
nipy/interfaces/tests/test_mlabtemp.py [new file with mode: 0644]
nipy/io/__init__.py [new file with mode: 0644]
nipy/io/api.py [new file with mode: 0644]
nipy/io/files.py [new file with mode: 0644]
nipy/io/imageformats/__init__.py [new file with mode: 0644]
nipy/io/nibcompat.py [new file with mode: 0644]
nipy/io/nifti_ref.py [new file with mode: 0644]
nipy/io/setup.py [new file with mode: 0644]
nipy/io/tests/__init__.py [new file with mode: 0644]
nipy/io/tests/test_image_io.py [new file with mode: 0644]
nipy/io/tests/test_nibcompat.py [new file with mode: 0644]
nipy/io/tests/test_nifti_ref.py [new file with mode: 0644]
nipy/io/tests/test_save.py [new file with mode: 0644]
nipy/labs/README.txt [new file with mode: 0644]
nipy/labs/__init__.py [new file with mode: 0644]
nipy/labs/bindings/__init__.py [new file with mode: 0644]
nipy/labs/bindings/array.c [new file with mode: 0644]
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nipy/labs/bindings/benchmarks/__init__.py [new file with mode: 0644]
nipy/labs/bindings/benchmarks/bench_numpy.py [new file with mode: 0644]
nipy/labs/bindings/linalg.c [new file with mode: 0644]
nipy/labs/bindings/linalg.pyx [new file with mode: 0644]
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nipy/labs/bindings/tests/__init__.py [new file with mode: 0644]
nipy/labs/bindings/tests/test_array.py [new file with mode: 0644]
nipy/labs/bindings/tests/test_blas1.py [new file with mode: 0644]
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nipy/labs/bindings/tests/test_linalg.py [new file with mode: 0644]
nipy/labs/bindings/tests/test_numpy.py [new file with mode: 0644]
nipy/labs/bindings/wrapper.c [new file with mode: 0644]
nipy/labs/bindings/wrapper.pyx [new file with mode: 0644]
nipy/labs/datasets/__init__.py [new file with mode: 0644]
nipy/labs/datasets/converters.py [new file with mode: 0644]
nipy/labs/datasets/setup.py [new file with mode: 0644]
nipy/labs/datasets/tests/__init__.py [new file with mode: 0644]
nipy/labs/datasets/tests/test_converters.py [new file with mode: 0644]
nipy/labs/datasets/transforms/__init__.py [new file with mode: 0644]
nipy/labs/datasets/transforms/affine_transform.py [new file with mode: 0644]
nipy/labs/datasets/transforms/affine_utils.py [new file with mode: 0644]
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nipy/labs/datasets/transforms/tests/__init__.py [new file with mode: 0644]
nipy/labs/datasets/transforms/tests/test_affine_transform.py [new file with mode: 0644]
nipy/labs/datasets/transforms/tests/test_affine_utils.py [new file with mode: 0644]
nipy/labs/datasets/transforms/tests/test_transform.py [new file with mode: 0644]
nipy/labs/datasets/transforms/transform.py [new file with mode: 0644]
nipy/labs/datasets/volumes/__init__.py [new file with mode: 0644]
nipy/labs/datasets/volumes/setup.py [new file with mode: 0644]
nipy/labs/datasets/volumes/tests/__init__.py [new file with mode: 0644]
nipy/labs/datasets/volumes/tests/test_volume_data.py [new file with mode: 0644]
nipy/labs/datasets/volumes/tests/test_volume_field.py [new file with mode: 0644]
nipy/labs/datasets/volumes/tests/test_volume_grid.py [new file with mode: 0644]
nipy/labs/datasets/volumes/tests/test_volume_img.py [new file with mode: 0644]
nipy/labs/datasets/volumes/volume_data.py [new file with mode: 0644]
nipy/labs/datasets/volumes/volume_field.py [new file with mode: 0644]
nipy/labs/datasets/volumes/volume_grid.py [new file with mode: 0644]
nipy/labs/datasets/volumes/volume_img.py [new file with mode: 0644]
nipy/labs/glm/__init__.py [new file with mode: 0644]
nipy/labs/glm/benchmarks/__init__.py [new file with mode: 0644]
nipy/labs/glm/benchmarks/bench_glm.py [new file with mode: 0644]
nipy/labs/glm/glm.py [new file with mode: 0644]
nipy/labs/glm/kalman.c [new file with mode: 0644]
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nipy/labs/glm/tests/__init__.py [new file with mode: 0644]
nipy/labs/glm/tests/test_glm.py [new file with mode: 0644]
nipy/labs/group/__init__.py [new file with mode: 0644]
nipy/labs/group/glm_twolevel.c [new file with mode: 0644]
nipy/labs/group/glm_twolevel.pyx [new file with mode: 0644]
nipy/labs/group/onesample.c [new file with mode: 0644]
nipy/labs/group/onesample.pyx [new file with mode: 0644]
nipy/labs/group/permutation_test.py [new file with mode: 0644]
nipy/labs/group/setup.py [new file with mode: 0644]
nipy/labs/group/tests/__init__.py [new file with mode: 0644]
nipy/labs/group/tests/test_onesample_stat.py [new file with mode: 0644]
nipy/labs/group/tests/test_permutation_test.py [new file with mode: 0644]
nipy/labs/group/twosample.c [new file with mode: 0644]
nipy/labs/group/twosample.pyx [new file with mode: 0644]
nipy/labs/mask.py [new file with mode: 0644]
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nipy/labs/spatial_models/__init__.py [new file with mode: 0644]
nipy/labs/spatial_models/bayesian_structural_analysis.py [new file with mode: 0644]
nipy/labs/spatial_models/bsa_io.py [new file with mode: 0644]
nipy/labs/spatial_models/discrete_domain.py [new file with mode: 0644]
nipy/labs/spatial_models/hierarchical_parcellation.py [new file with mode: 0644]
nipy/labs/spatial_models/hroi.py [new file with mode: 0644]
nipy/labs/spatial_models/mroi.py [new file with mode: 0644]
nipy/labs/spatial_models/parcel_io.py [new file with mode: 0644]
nipy/labs/spatial_models/parcellation.py [new file with mode: 0644]
nipy/labs/spatial_models/setup.py [new file with mode: 0644]
nipy/labs/spatial_models/structural_bfls.py [new file with mode: 0644]
nipy/labs/spatial_models/tests/__init__.py [new file with mode: 0644]
nipy/labs/spatial_models/tests/some_blobs.nii [new file with mode: 0644]
nipy/labs/spatial_models/tests/test_bsa.py [new file with mode: 0644]
nipy/labs/spatial_models/tests/test_bsa_io.py [new file with mode: 0644]
nipy/labs/spatial_models/tests/test_discrete_domain.py [new file with mode: 0644]
nipy/labs/spatial_models/tests/test_hroi.py [new file with mode: 0644]
nipy/labs/spatial_models/tests/test_mroi.py [new file with mode: 0644]
nipy/labs/spatial_models/tests/test_parcel.py [new file with mode: 0644]
nipy/labs/spatial_models/tests/test_parcel_io.py [new file with mode: 0644]
nipy/labs/statistical_mapping.py [new file with mode: 0644]
nipy/labs/tests/__init__.py [new file with mode: 0644]
nipy/labs/tests/test_mask.py [new file with mode: 0644]
nipy/labs/tests/test_statistical_mapping.py [new file with mode: 0644]
nipy/labs/utils/__init__.py [new file with mode: 0644]
nipy/labs/utils/mask.py [new file with mode: 0644]
nipy/labs/utils/reproducibility_measures.py [new file with mode: 0644]
nipy/labs/utils/routines.c [new file with mode: 0644]
nipy/labs/utils/routines.pyx [new file with mode: 0644]
nipy/labs/utils/setup.py [new file with mode: 0644]
nipy/labs/utils/simul_multisubject_fmri_dataset.py [new file with mode: 0644]
nipy/labs/utils/tests/__init__.py [new file with mode: 0644]
nipy/labs/utils/tests/test_misc.py [new file with mode: 0644]
nipy/labs/utils/tests/test_repro.py [new file with mode: 0644]
nipy/labs/utils/tests/test_simul_multisubject_fmri_dataset.py [new file with mode: 0644]
nipy/labs/utils/zscore.py [new file with mode: 0644]
nipy/labs/viz.py [new file with mode: 0644]
nipy/labs/viz3d.py [new file with mode: 0644]
nipy/labs/viz_tools/__init__.py [new file with mode: 0644]
nipy/labs/viz_tools/activation_maps.py [new file with mode: 0644]
nipy/labs/viz_tools/anat_cache.py [new file with mode: 0644]
nipy/labs/viz_tools/cm.py [new file with mode: 0644]
nipy/labs/viz_tools/coord_tools.py [new file with mode: 0644]
nipy/labs/viz_tools/edge_detect.py [new file with mode: 0644]
nipy/labs/viz_tools/maps_3d.py [new file with mode: 0644]
nipy/labs/viz_tools/setup.py [new file with mode: 0644]
nipy/labs/viz_tools/slicers.py [new file with mode: 0644]
nipy/labs/viz_tools/test/__init__.py [new file with mode: 0644]
nipy/labs/viz_tools/test/test_activation_maps.py [new file with mode: 0644]
nipy/labs/viz_tools/test/test_cm.py [new file with mode: 0644]
nipy/labs/viz_tools/test/test_coord_tools.py [new file with mode: 0644]
nipy/labs/viz_tools/test/test_edge_detect.py [new file with mode: 0644]
nipy/labs/viz_tools/test/test_slicers.py [new file with mode: 0644]
nipy/modalities/__init__.py [new file with mode: 0644]
nipy/modalities/fmri/__init__.py [new file with mode: 0644]
nipy/modalities/fmri/api.py [new file with mode: 0644]
nipy/modalities/fmri/design.py [new file with mode: 0644]
nipy/modalities/fmri/design_matrix.py [new file with mode: 0644]
nipy/modalities/fmri/experimental_paradigm.py [new file with mode: 0644]
nipy/modalities/fmri/fmri.py [new file with mode: 0644]
nipy/modalities/fmri/fmristat/__init__.py [new file with mode: 0644]
nipy/modalities/fmri/fmristat/api.py [new file with mode: 0644]
nipy/modalities/fmri/fmristat/hrf.py [new file with mode: 0644]
nipy/modalities/fmri/fmristat/invert.py [new file with mode: 0644]
nipy/modalities/fmri/fmristat/model.py [new file with mode: 0644]
nipy/modalities/fmri/fmristat/outputters.py [new file with mode: 0644]
nipy/modalities/fmri/fmristat/setup.py [new file with mode: 0644]
nipy/modalities/fmri/fmristat/tests/FIACdesigns.py [new file with mode: 0644]
nipy/modalities/fmri/fmristat/tests/__init__.py [new file with mode: 0644]
nipy/modalities/fmri/fmristat/tests/test_FIAC.py [new file with mode: 0644]
nipy/modalities/fmri/fmristat/tests/test_hrf.py [new file with mode: 0644]
nipy/modalities/fmri/fmristat/tests/test_iterables.py [new file with mode: 0644]
nipy/modalities/fmri/fmristat/tests/test_model.py [new file with mode: 0644]
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