dgit.raspbian.org Git - python-pysam.git/commit

author	Andreas Tille <tille@debian.org>
	Wed, 8 Nov 2023 08:35:50 +0000 (09:35 +0100)
committer	Andreas Tille <tille@debian.org>
	Wed, 8 Nov 2023 08:35:50 +0000 (09:35 +0100)
commit	9fc6ed26ac4ae101a9bffb2bd9b73f0a396a4693
tree	b79461b5c0a5ebc7c66a689fe155b73340628b1d	tree \| snapshot
parent	5486b17301f333bb9baa96f655598fcd64038e34	commit \| diff

New upstream version 0.22.0+ds

124 files changed:

.cirrus.yml	[new file with mode: 0644]	blob
.python-version	[deleted file]	blob \| history
.travis.disabled.yml	[deleted file]	blob \| history
MANIFEST.in		diff \| blob \| history
NEWS		diff \| blob \| history
README.rst		diff \| blob \| history
bcftools/LICENSE		diff \| blob \| history
bcftools/bcftools.h		diff \| blob \| history
bcftools/cigar_state.h		diff \| blob \| history
bcftools/consensus.c		diff \| blob \| history
bcftools/consensus.c.pysam.c		diff \| blob \| history
bcftools/convert.c		diff \| blob \| history
bcftools/convert.c.pysam.c		diff \| blob \| history
bcftools/convert.h		diff \| blob \| history
bcftools/csq.c		diff \| blob \| history
bcftools/csq.c.pysam.c		diff \| blob \| history
bcftools/filter.c		diff \| blob \| history
bcftools/filter.c.pysam.c		diff \| blob \| history
bcftools/filter.h		diff \| blob \| history
bcftools/gff.c	[new file with mode: 0644]	blob
bcftools/gff.c.pysam.c	[new file with mode: 0644]	blob
bcftools/gff.h	[new file with mode: 0644]	blob
bcftools/hex.h		diff \| blob \| history
bcftools/mpileup.c		diff \| blob \| history
bcftools/mpileup.c.pysam.c		diff \| blob \| history
bcftools/reheader.c		diff \| blob \| history
bcftools/reheader.c.pysam.c		diff \| blob \| history
bcftools/tsv2vcf.c		diff \| blob \| history
bcftools/tsv2vcf.c.pysam.c		diff \| blob \| history
bcftools/variantkey.h		diff \| blob \| history
bcftools/vcfannotate.c		diff \| blob \| history
bcftools/vcfannotate.c.pysam.c		diff \| blob \| history
bcftools/vcfcall.c		diff \| blob \| history
bcftools/vcfcall.c.pysam.c		diff \| blob \| history
bcftools/vcfconcat.c		diff \| blob \| history
bcftools/vcfconcat.c.pysam.c		diff \| blob \| history
bcftools/vcfconvert.c		diff \| blob \| history
bcftools/vcfconvert.c.pysam.c		diff \| blob \| history
bcftools/vcffilter.c		diff \| blob \| history
bcftools/vcffilter.c.pysam.c		diff \| blob \| history
bcftools/vcfgtcheck.c		diff \| blob \| history
bcftools/vcfgtcheck.c.pysam.c		diff \| blob \| history
bcftools/vcfisec.c		diff \| blob \| history
bcftools/vcfisec.c.pysam.c		diff \| blob \| history
bcftools/vcfmerge.c		diff \| blob \| history
bcftools/vcfmerge.c.pysam.c		diff \| blob \| history
bcftools/vcfnorm.c		diff \| blob \| history
bcftools/vcfnorm.c.pysam.c		diff \| blob \| history
bcftools/vcfplugin.c		diff \| blob \| history
bcftools/vcfplugin.c.pysam.c		diff \| blob \| history
bcftools/vcfquery.c		diff \| blob \| history
bcftools/vcfquery.c.pysam.c		diff \| blob \| history
bcftools/vcfsort.c		diff \| blob \| history
bcftools/vcfsort.c.pysam.c		diff \| blob \| history
bcftools/vcfstats.c		diff \| blob \| history
bcftools/vcfstats.c.pysam.c		diff \| blob \| history
bcftools/vcfview.c		diff \| blob \| history
bcftools/vcfview.c.pysam.c		diff \| blob \| history
bcftools/version.c		diff \| blob \| history
bcftools/version.c.pysam.c		diff \| blob \| history
bcftools/version.sh		diff \| blob \| history
cy_build.py	[deleted file]	blob \| history
devtools/import.py		diff \| blob \| history
devtools/install-prerequisites.sh	[new file with mode: 0755]	blob
doc/conf.py		diff \| blob \| history
doc/index.rst		diff \| blob \| history
doc/installation.rst		diff \| blob \| history
doc/release.rst		diff \| blob \| history
doc/requirements-rtd.txt	[new file with mode: 0644]	blob
pyproject.toml		diff \| blob \| history
pysam/libcalignedsegment.pyx		diff \| blob \| history
pysam/libcalignmentfile.pyi		diff \| blob \| history
pysam/libcalignmentfile.pyx		diff \| blob \| history
pysam/libcbcf.pyx		diff \| blob \| history
pysam/libcbgzf.pyx		diff \| blob \| history
pysam/libchtslib.pxd		diff \| blob \| history
pysam/libchtslib.pyi		diff \| blob \| history
pysam/libchtslib.pyx		diff \| blob \| history
pysam/libcutils.pxd		diff \| blob \| history
pysam/libcutils.pyx		diff \| blob \| history
pysam/version.h		diff \| blob \| history
pysam/version.py		diff \| blob \| history
requirements-dev.txt	[new file with mode: 0644]	blob
requirements.txt	[deleted file]	blob \| history
samtools/README		diff \| blob \| history
samtools/bam_ampliconclip.c		diff \| blob \| history
samtools/bam_ampliconclip.c.pysam.c		diff \| blob \| history
samtools/bam_consensus.c		diff \| blob \| history
samtools/bam_consensus.c.pysam.c		diff \| blob \| history
samtools/bam_fastq.c		diff \| blob \| history
samtools/bam_fastq.c.pysam.c		diff \| blob \| history
samtools/bam_import.c		diff \| blob \| history
samtools/bam_import.c.pysam.c		diff \| blob \| history
samtools/bam_index.c		diff \| blob \| history
samtools/bam_index.c.pysam.c		diff \| blob \| history
samtools/bam_markdup.c		diff \| blob \| history
samtools/bam_markdup.c.pysam.c		diff \| blob \| history
samtools/bam_md.c		diff \| blob \| history
samtools/bam_md.c.pysam.c		diff \| blob \| history
samtools/bam_reheader.c		diff \| blob \| history
samtools/bam_reheader.c.pysam.c		diff \| blob \| history
samtools/bam_sort.c		diff \| blob \| history
samtools/bam_sort.c.pysam.c		diff \| blob \| history
samtools/bam_split.c		diff \| blob \| history
samtools/bam_split.c.pysam.c		diff \| blob \| history
samtools/bamshuf.c		diff \| blob \| history
samtools/bamshuf.c.pysam.c		diff \| blob \| history
samtools/consensus_pileup.c		diff \| blob \| history
samtools/consensus_pileup.c.pysam.c		diff \| blob \| history
samtools/consensus_pileup.h		diff \| blob \| history
samtools/cram_size.c		diff \| blob \| history
samtools/cram_size.c.pysam.c		diff \| blob \| history
samtools/reset.c		diff \| blob \| history
samtools/reset.c.pysam.c		diff \| blob \| history
samtools/sam_view.c		diff \| blob \| history
samtools/sam_view.c.pysam.c		diff \| blob \| history
samtools/stats.c		diff \| blob \| history
samtools/stats.c.pysam.c		diff \| blob \| history
samtools/version.sh		diff \| blob \| history
setup.py		diff \| blob \| history
tests/AlignedSegment_test.py		diff \| blob \| history
tests/_compile_test.pyx		diff \| blob \| history
tests/_cython_flagstat.pyx		diff \| blob \| history
tox.ini	[deleted file]	blob \| history

Unnamed repository; edit this file 'description' to name the repository.

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