fix test failure with htslib 1.20.
authorDebian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Tue, 4 Jun 2024 13:31:55 +0000 (13:31 +0000)
committerRaspbian forward porter <root@raspbian.org>
Tue, 4 Jun 2024 13:31:55 +0000 (13:31 +0000)
commit923a99ea8225ba8989a0ae9fdac5d6f08e252aab
treed45dcd5b867d4bd1767b0410517cc3d86924d22e
parent49efa754520032d9162bd66aba4d09dfc843d99f
fix test failure with htslib 1.20.

This data file contains invalid data, which is diagnosed by
improvements in bam_parse_basemod2() in HTSlib 1.20. Updating these
base modification data files to the versions in htslib and hts-specs
corrects the problem.
Author: John Marshall
Origin: upstream, https://github.com/pysam-developers/pysam/issues/1291#issuecomment-2131146211
Bug: https://github.com/pysam-developers/pysam/issues/1291
Reviewed-by: Étienne Mollier <emollier@debian.org>
Last-Update: 2024-05-29

Gbp-Pq: Name htslib-1.20.patch
tests/pysam_data/MM-chebi.sam