projects / ncbi-blast+.git / commit
? search:
summary | shortlog | log | commit | commitdiff | tree
(initial) | patch
Import ncbi-blast+_2.12.0+ds.orig.tar.xz
authorAaron M. Ucko <ucko@debian.org>
Thu, 2 Dec 2021 03:27:15 +0000 (22:27 -0500)
committerAaron M. Ucko <ucko@debian.org>
Thu, 2 Dec 2021 03:27:15 +0000 (22:27 -0500)
commit585e5f9a04f4d9fae0dce7bc225ceb7a34b8e8df
treee854810ca0c0621c3cc524041b666476693865e0tree | snapshot
Import ncbi-blast+_2.12.0+ds.orig.tar.xz

[dgit import orig ncbi-blast+_2.12.0+ds.orig.tar.xz]
6354 files changed:
c++/compilers/cygwin/build.sh [new file with mode: 0644] blob
c++/compilers/cygwin/check.sh [new file with mode: 0644] blob
c++/compilers/unix/Clang.sh [new file with mode: 0755] blob
c++/compilers/unix/GCC.sh [new file with mode: 0755] blob
c++/compilers/unix/ICC.sh [new file with mode: 0755] blob
c++/compilers/unix/LLVM-GCC.sh [new file with mode: 0755] blob
c++/compilers/unix/Xcode.sh [new file with mode: 0755] blob
c++/compilers/unix/cxx_filter.ICC.sh [new file with mode: 0755] blob
c++/compilers/vs2017/Makefile.WinMain.app.msvc [new file with mode: 0644] blob
c++/compilers/vs2017/Makefile.wxWidgets.app.msvc [new file with mode: 0644] blob
c++/compilers/vs2017/build.sh [new file with mode: 0644] blob
c++/compilers/vs2017/build_exec.bat [new file with mode: 0644] blob
c++/compilers/vs2017/build_util.sh [new file with mode: 0644] blob
c++/compilers/vs2017/check.sh [new file with mode: 0644] blob
c++/compilers/vs2017/configure.bat [new file with mode: 0644] blob
c++/compilers/vs2017/datatool.bat [new file with mode: 0644] blob
c++/compilers/vs2017/dll/build/UtilityProjects/_CONFIGURE_.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2017/dll/build/UtilityProjects/_CONFIGURE_DIALOG_.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2017/dll/build/UtilityProjects/configure._ [new file with mode: 0644] blob
c++/compilers/vs2017/dll/build/UtilityProjects/configure_dialog._ [new file with mode: 0644] blob
c++/compilers/vs2017/dll/build/all.bat [new file with mode: 0644] blob
c++/compilers/vs2017/dll/build/all_gbench.bat [new file with mode: 0644] blob
c++/compilers/vs2017/dll/build/all_gui.bat [new file with mode: 0644] blob
c++/compilers/vs2017/dll/build/all_ncbi.bat [new file with mode: 0644] blob
c++/compilers/vs2017/dll/build/gbench/UtilityProjects/_CONFIGURE_.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2017/dll/build/gbench/UtilityProjects/_CONFIGURE_DIALOG_.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2017/dll/build/gbench/UtilityProjects/configure._ [new file with mode: 0644] blob
c++/compilers/vs2017/dll/build/gbench/UtilityProjects/configure_dialog._ [new file with mode: 0644] blob
c++/compilers/vs2017/dll/build/gbench/configure_prebuild.bat [new file with mode: 0644] blob
c++/compilers/vs2017/dll/build/gbench/gbench_install/gbench-install.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2017/dll/build/gbench/ncbi_gbench.sln [new file with mode: 0644] blob
c++/compilers/vs2017/dll/build/gui/UtilityProjects/_CONFIGURE_.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2017/dll/build/gui/UtilityProjects/_CONFIGURE_DIALOG_.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2017/dll/build/gui/UtilityProjects/configure._ [new file with mode: 0644] blob
c++/compilers/vs2017/dll/build/gui/UtilityProjects/configure_dialog._ [new file with mode: 0644] blob
c++/compilers/vs2017/dll/build/gui/ncbi_gui_dll.sln [new file with mode: 0644] blob
c++/compilers/vs2017/dll/build/internal/gbench/gbench_install_internal/gbench-install-internal.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2017/dll/build/ncbi_cpp_dll.sln [new file with mode: 0644] blob
c++/compilers/vs2017/dll/dll_main.cpp [new file with mode: 0644] blob
c++/compilers/vs2017/dll/third_party_dll_install.mak [new file with mode: 0644] blob
c++/compilers/vs2017/dll/third_party_dll_install.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2017/dll/third_party_msvcdll_install.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2017/install.sh [new file with mode: 0644] blob
c++/compilers/vs2017/lock_ptb_config.bat [new file with mode: 0644] blob
c++/compilers/vs2017/make.bat [new file with mode: 0644] blob
c++/compilers/vs2017/make_ncbi.bat [new file with mode: 0644] blob
c++/compilers/vs2017/msvcvars.bat [new file with mode: 0644] blob
c++/compilers/vs2017/ncbi.rc [new file with mode: 0644] blob
c++/compilers/vs2017/ncbilogo.ico [new file with mode: 0644] blob
c++/compilers/vs2017/protoc.bat [new file with mode: 0644] blob
c++/compilers/vs2017/ptb.bat [new file with mode: 0644] blob
c++/compilers/vs2017/static/build/UtilityProjects/PTB.sln [new file with mode: 0644] blob
c++/compilers/vs2017/static/build/UtilityProjects/_CONFIGURE_.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2017/static/build/UtilityProjects/_CONFIGURE_DIALOG_.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2017/static/build/UtilityProjects/configure._ [new file with mode: 0644] blob
c++/compilers/vs2017/static/build/UtilityProjects/configure_dialog._ [new file with mode: 0644] blob
c++/compilers/vs2017/static/build/all.bat [new file with mode: 0644] blob
c++/compilers/vs2017/static/build/all_gui.bat [new file with mode: 0644] blob
c++/compilers/vs2017/static/build/all_ncbi.bat [new file with mode: 0644] blob
c++/compilers/vs2017/static/build/build-system/project_tree_builder/msbuild/msbuild_dataobj.lib.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2017/static/build/build-system/project_tree_builder/project_tree_builder.exe.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2017/static/build/corelib/xncbi.lib.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2017/static/build/gui/UtilityProjects/_CONFIGURE_.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2017/static/build/gui/UtilityProjects/_CONFIGURE_DIALOG_.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2017/static/build/gui/UtilityProjects/configure._ [new file with mode: 0644] blob
c++/compilers/vs2017/static/build/gui/UtilityProjects/configure_dialog._ [new file with mode: 0644] blob
c++/compilers/vs2017/static/build/gui/ncbi_gui.sln [new file with mode: 0644] blob
c++/compilers/vs2017/static/build/ncbi_cpp.sln [new file with mode: 0644] blob
c++/compilers/vs2017/static/build/serial/datatool/datatool.exe.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2017/static/build/serial/xser.lib.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2017/static/build/util/regexp/regexp.lib.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2017/static/build/util/xregexp/xregexp.lib.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2017/static/build/util/xutil.lib.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2017/static/third_party_msvcstatic_install.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2017/static/third_party_static_install.mak [new file with mode: 0644] blob
c++/compilers/vs2017/static/third_party_static_install.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2017/third_party_install.meta.mk [new file with mode: 0644] blob
c++/compilers/vs2017/user/build/UtilityProjects/_CONFIGURE_.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2017/user/build/UtilityProjects/_CONFIGURE_DIALOG_.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2017/user/build/UtilityProjects/configure._ [new file with mode: 0644] blob
c++/compilers/vs2017/user/build/UtilityProjects/configure_dialog._ [new file with mode: 0644] blob
c++/compilers/vs2017/user/build/ncbi_user.sln [new file with mode: 0644] blob
c++/compilers/vs2019/Makefile.WinMain.app.msvc [new file with mode: 0644] blob
c++/compilers/vs2019/Makefile.wxWidgets.app.msvc [new file with mode: 0644] blob
c++/compilers/vs2019/build.sh [new file with mode: 0644] blob
c++/compilers/vs2019/build_exec.bat [new file with mode: 0644] blob
c++/compilers/vs2019/build_util.sh [new file with mode: 0644] blob
c++/compilers/vs2019/check.sh [new file with mode: 0644] blob
c++/compilers/vs2019/configure.bat [new file with mode: 0644] blob
c++/compilers/vs2019/datatool.bat [new file with mode: 0644] blob
c++/compilers/vs2019/dll/build/UtilityProjects/_CONFIGURE_.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2019/dll/build/UtilityProjects/_CONFIGURE_DIALOG_.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2019/dll/build/UtilityProjects/configure._ [new file with mode: 0644] blob
c++/compilers/vs2019/dll/build/UtilityProjects/configure_dialog._ [new file with mode: 0644] blob
c++/compilers/vs2019/dll/build/all.bat [new file with mode: 0644] blob
c++/compilers/vs2019/dll/build/all_gbench.bat [new file with mode: 0644] blob
c++/compilers/vs2019/dll/build/all_gui.bat [new file with mode: 0644] blob
c++/compilers/vs2019/dll/build/all_ncbi.bat [new file with mode: 0644] blob
c++/compilers/vs2019/dll/build/gbench/UtilityProjects/_CONFIGURE_.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2019/dll/build/gbench/UtilityProjects/_CONFIGURE_DIALOG_.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2019/dll/build/gbench/UtilityProjects/configure._ [new file with mode: 0644] blob
c++/compilers/vs2019/dll/build/gbench/UtilityProjects/configure_dialog._ [new file with mode: 0644] blob
c++/compilers/vs2019/dll/build/gbench/configure_prebuild.bat [new file with mode: 0644] blob
c++/compilers/vs2019/dll/build/gbench/gbench_install/gbench-install.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2019/dll/build/gbench/ncbi_gbench.sln [new file with mode: 0644] blob
c++/compilers/vs2019/dll/build/gui/UtilityProjects/_CONFIGURE_.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2019/dll/build/gui/UtilityProjects/_CONFIGURE_DIALOG_.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2019/dll/build/gui/UtilityProjects/configure._ [new file with mode: 0644] blob
c++/compilers/vs2019/dll/build/gui/UtilityProjects/configure_dialog._ [new file with mode: 0644] blob
c++/compilers/vs2019/dll/build/gui/ncbi_gui_dll.sln [new file with mode: 0644] blob
c++/compilers/vs2019/dll/build/internal/gbench/gbench_install_internal/gbench-install-internal.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2019/dll/build/ncbi_cpp_dll.sln [new file with mode: 0644] blob
c++/compilers/vs2019/dll/dll_main.cpp [new file with mode: 0644] blob
c++/compilers/vs2019/dll/third_party_dll_install.mak [new file with mode: 0644] blob
c++/compilers/vs2019/dll/third_party_dll_install.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2019/dll/third_party_msvcdll_install.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2019/install.sh [new file with mode: 0644] blob
c++/compilers/vs2019/lock_ptb_config.bat [new file with mode: 0644] blob
c++/compilers/vs2019/make.bat [new file with mode: 0644] blob
c++/compilers/vs2019/make_ncbi.bat [new file with mode: 0644] blob
c++/compilers/vs2019/msvcvars.bat [new file with mode: 0644] blob
c++/compilers/vs2019/ncbi.rc [new file with mode: 0644] blob
c++/compilers/vs2019/ncbilogo.ico [new file with mode: 0644] blob
c++/compilers/vs2019/protoc.bat [new file with mode: 0644] blob
c++/compilers/vs2019/ptb.bat [new file with mode: 0644] blob
c++/compilers/vs2019/static/build/UtilityProjects/PTB.sln [new file with mode: 0644] blob
c++/compilers/vs2019/static/build/UtilityProjects/_CONFIGURE_.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2019/static/build/UtilityProjects/_CONFIGURE_DIALOG_.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2019/static/build/UtilityProjects/configure._ [new file with mode: 0644] blob
c++/compilers/vs2019/static/build/UtilityProjects/configure_dialog._ [new file with mode: 0644] blob
c++/compilers/vs2019/static/build/all.bat [new file with mode: 0644] blob
c++/compilers/vs2019/static/build/all_gui.bat [new file with mode: 0644] blob
c++/compilers/vs2019/static/build/all_ncbi.bat [new file with mode: 0644] blob
c++/compilers/vs2019/static/build/build-system/project_tree_builder/msbuild/msbuild_dataobj.lib.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2019/static/build/build-system/project_tree_builder/project_tree_builder.exe.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2019/static/build/corelib/xncbi.lib.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2019/static/build/gui/UtilityProjects/_CONFIGURE_.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2019/static/build/gui/UtilityProjects/_CONFIGURE_DIALOG_.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2019/static/build/gui/UtilityProjects/configure._ [new file with mode: 0644] blob
c++/compilers/vs2019/static/build/gui/UtilityProjects/configure_dialog._ [new file with mode: 0644] blob
c++/compilers/vs2019/static/build/gui/ncbi_gui.sln [new file with mode: 0644] blob
c++/compilers/vs2019/static/build/ncbi_cpp.sln [new file with mode: 0644] blob
c++/compilers/vs2019/static/build/serial/datatool/datatool.exe.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2019/static/build/serial/xser.lib.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2019/static/build/util/regexp/regexp.lib.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2019/static/build/util/xregexp/xregexp.lib.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2019/static/build/util/xutil.lib.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2019/static/third_party_msvcstatic_install.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2019/static/third_party_static_install.mak [new file with mode: 0644] blob
c++/compilers/vs2019/static/third_party_static_install.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2019/third_party_install.meta.mk [new file with mode: 0644] blob
c++/compilers/vs2019/user/build/UtilityProjects/_CONFIGURE_.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2019/user/build/UtilityProjects/_CONFIGURE_DIALOG_.vcxproj [new file with mode: 0644] blob
c++/compilers/vs2019/user/build/UtilityProjects/configure._ [new file with mode: 0644] blob
c++/compilers/vs2019/user/build/UtilityProjects/configure_dialog._ [new file with mode: 0644] blob
c++/compilers/vs2019/user/build/ncbi_user.sln [new file with mode: 0644] blob
c++/compilers/xcode30_prj/Makefile.FLTK.app.xcode [new file with mode: 0644] blob
c++/compilers/xcode30_prj/check.sh [new file with mode: 0755] blob
c++/compilers/xcode30_prj/configure [new file with mode: 0755] blob
c++/compilers/xcode30_prj/copybin.sh [new file with mode: 0755] blob
c++/compilers/xcode30_prj/copyutl.sh [new file with mode: 0755] blob
c++/compilers/xcode30_prj/datatool.sh [new file with mode: 0755] blob
c++/compilers/xcode30_prj/dll/UtilityProjects/configure_gui_ncbi_cpp_dll.sh [new file with mode: 0755] blob
c++/compilers/xcode30_prj/dll/UtilityProjects/configure_gui_ncbi_gbench.sh [new file with mode: 0755] blob
c++/compilers/xcode30_prj/dll/UtilityProjects/configure_gui_ncbi_gui_dll.sh [new file with mode: 0755] blob
c++/compilers/xcode30_prj/dll/UtilityProjects/configure_ncbi_cpp_dll.sh [new file with mode: 0755] blob
c++/compilers/xcode30_prj/dll/UtilityProjects/configure_ncbi_gbench.sh [new file with mode: 0755] blob
c++/compilers/xcode30_prj/dll/UtilityProjects/configure_ncbi_gui_dll.sh [new file with mode: 0755] blob
c++/compilers/xcode30_prj/dll/ncbi_cpp_dll.xcodeproj/project.pbxproj [new file with mode: 0644] blob
c++/compilers/xcode30_prj/dll/ncbi_gbench.xcodeproj/project.pbxproj [new file with mode: 0644] blob
c++/compilers/xcode30_prj/dll/ncbi_gui_dll.xcodeproj/project.pbxproj [new file with mode: 0644] blob
c++/compilers/xcode30_prj/precfg.sh [new file with mode: 0755] blob
c++/compilers/xcode30_prj/protoc.sh [new file with mode: 0755] blob
c++/compilers/xcode30_prj/ptb.sh [new file with mode: 0755] blob
c++/compilers/xcode30_prj/static/UtilityProjects/PTB.xcodeproj/project.pbxproj [new file with mode: 0644] blob
c++/compilers/xcode30_prj/static/UtilityProjects/configure_gui_ncbi_cpp.sh [new file with mode: 0755] blob
c++/compilers/xcode30_prj/static/UtilityProjects/configure_gui_ncbi_gui.sh [new file with mode: 0755] blob
c++/compilers/xcode30_prj/static/UtilityProjects/configure_ncbi_cpp.sh [new file with mode: 0755] blob
c++/compilers/xcode30_prj/static/UtilityProjects/configure_ncbi_gui.sh [new file with mode: 0755] blob
c++/compilers/xcode30_prj/static/ncbi_cpp.xcodeproj/project.pbxproj [new file with mode: 0644] blob
c++/compilers/xcode30_prj/static/ncbi_gui.xcodeproj/project.pbxproj [new file with mode: 0644] blob
c++/compilers/xcode30_prj/xcodebuild.sh [new file with mode: 0755] blob
c++/configure [new file with mode: 0755] blob
c++/configure.orig [new file with mode: 0755] blob
c++/include/algo/blast/api/bl2seq.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/blast_advprot_options.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/blast_aux.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/blast_dbindex.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/blast_exception.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/blast_mtlock.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/blast_node.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/blast_nucl_options.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/blast_options.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/blast_options_builder.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/blast_options_handle.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/blast_prot_options.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/blast_results.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/blast_rps_options.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/blast_seqinfosrc.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/blast_seqinfosrc_aux.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/blast_types.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/blast_usage_report.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/blastp_kmer_options.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/blastx_options.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/cdd_pssm_input.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/deltablast.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/deltablast_options.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/disc_nucl_options.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/effsearchspace_calc.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/hspstream_queue.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/local_blast.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/local_db_adapter.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/local_search.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/magicblast.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/magicblast_options.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/msa_pssm_input.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/objmgr_query_data.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/objmgrfree_query_data.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/phiblast_nucl_options.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/phiblast_prot_options.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/prelim_stage.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/psi_pssm_input.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/psibl2seq.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/psiblast.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/psiblast_iteration.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/psiblast_options.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/pssm_engine.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/pssm_input.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/query_data.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/remote_blast.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/remote_search.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/repeats_filter.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/rps_aux.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/rpsblast_local.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/rpstblastn_options.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/search_strategy.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/seedtop.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/seqinfosrc_seqdb.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/seqinfosrc_seqvec.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/seqsrc_multiseq.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/seqsrc_seqdb.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/setup_factory.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/sseqloc.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/subj_ranges_set.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/tblastn_options.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/tblastx_options.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/traceback_stage.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/uniform_search.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/version.hpp [new file with mode: 0644] blob
c++/include/algo/blast/api/windowmask_filter.hpp [new file with mode: 0644] blob
c++/include/algo/blast/blastinput/blast_args.hpp [new file with mode: 0644] blob
c++/include/algo/blast/blastinput/blast_asn1_input.hpp [new file with mode: 0644] blob
c++/include/algo/blast/blastinput/blast_fasta_input.hpp [new file with mode: 0644] blob
c++/include/algo/blast/blastinput/blast_input.hpp [new file with mode: 0644] blob
c++/include/algo/blast/blastinput/blast_input_aux.hpp [new file with mode: 0644] blob
c++/include/algo/blast/blastinput/blast_scope_src.hpp [new file with mode: 0644] blob
c++/include/algo/blast/blastinput/blastn_args.hpp [new file with mode: 0644] blob
c++/include/algo/blast/blastinput/blastp_args.hpp [new file with mode: 0644] blob
c++/include/algo/blast/blastinput/blastx_args.hpp [new file with mode: 0644] blob
c++/include/algo/blast/blastinput/cmdline_flags.hpp [new file with mode: 0644] blob
c++/include/algo/blast/blastinput/deltablast_args.hpp [new file with mode: 0644] blob
c++/include/algo/blast/blastinput/igblastn_args.hpp [new file with mode: 0644] blob
c++/include/algo/blast/blastinput/igblastp_args.hpp [new file with mode: 0644] blob
c++/include/algo/blast/blastinput/kblastp_args.hpp [new file with mode: 0644] blob
c++/include/algo/blast/blastinput/magicblast_args.hpp [new file with mode: 0644] blob
c++/include/algo/blast/blastinput/psiblast_args.hpp [new file with mode: 0644] blob
c++/include/algo/blast/blastinput/rmblastn_args.hpp [new file with mode: 0644] blob
c++/include/algo/blast/blastinput/rpsblast_args.hpp [new file with mode: 0644] blob
c++/include/algo/blast/blastinput/rpstblastn_args.hpp [new file with mode: 0644] blob
c++/include/algo/blast/blastinput/tblastn_args.hpp [new file with mode: 0644] blob
c++/include/algo/blast/blastinput/tblastx_args.hpp [new file with mode: 0644] blob
c++/include/algo/blast/composition_adjustment/compo_heap.h [new file with mode: 0644] blob
c++/include/algo/blast/composition_adjustment/compo_mode_condition.h [new file with mode: 0644] blob
c++/include/algo/blast/composition_adjustment/composition_adjustment.h [new file with mode: 0644] blob
c++/include/algo/blast/composition_adjustment/composition_constants.h [new file with mode: 0644] blob
c++/include/algo/blast/composition_adjustment/matrix_frequency_data.h [new file with mode: 0644] blob
c++/include/algo/blast/composition_adjustment/nlm_linear_algebra.h [new file with mode: 0644] blob
c++/include/algo/blast/composition_adjustment/optimize_target_freq.h [new file with mode: 0644] blob
c++/include/algo/blast/composition_adjustment/redo_alignment.h [new file with mode: 0644] blob
c++/include/algo/blast/composition_adjustment/smith_waterman.h [new file with mode: 0644] blob
c++/include/algo/blast/composition_adjustment/unified_pvalues.h [new file with mode: 0644] blob
c++/include/algo/blast/core/aa_ungapped.h [new file with mode: 0644] blob
c++/include/algo/blast/core/blast_aalookup.h [new file with mode: 0644] blob
c++/include/algo/blast/core/blast_aascan.h [new file with mode: 0644] blob
c++/include/algo/blast/core/blast_def.h [new file with mode: 0644] blob
c++/include/algo/blast/core/blast_diagnostics.h [new file with mode: 0644] blob
c++/include/algo/blast/core/blast_encoding.h [new file with mode: 0644] blob
c++/include/algo/blast/core/blast_engine.h [new file with mode: 0644] blob
c++/include/algo/blast/core/blast_export.h [new file with mode: 0644] blob
c++/include/algo/blast/core/blast_extend.h [new file with mode: 0644] blob
c++/include/algo/blast/core/blast_filter.h [new file with mode: 0644] blob
c++/include/algo/blast/core/blast_gapalign.h [new file with mode: 0644] blob
c++/include/algo/blast/core/blast_hits.h [new file with mode: 0644] blob
c++/include/algo/blast/core/blast_hspfilter.h [new file with mode: 0644] blob
c++/include/algo/blast/core/blast_hspstream.h [new file with mode: 0644] blob
c++/include/algo/blast/core/blast_kappa.h [new file with mode: 0644] blob
c++/include/algo/blast/core/blast_lookup.h [new file with mode: 0644] blob
c++/include/algo/blast/core/blast_message.h [new file with mode: 0644] blob
c++/include/algo/blast/core/blast_nalookup.h [new file with mode: 0644] blob
c++/include/algo/blast/core/blast_nascan.h [new file with mode: 0644] blob
c++/include/algo/blast/core/blast_options.h [new file with mode: 0644] blob
c++/include/algo/blast/core/blast_parameters.h [new file with mode: 0644] blob
c++/include/algo/blast/core/blast_program.h [new file with mode: 0644] blob
c++/include/algo/blast/core/blast_psi.h [new file with mode: 0644] blob
c++/include/algo/blast/core/blast_query_info.h [new file with mode: 0644] blob
c++/include/algo/blast/core/blast_rps.h [new file with mode: 0644] blob
c++/include/algo/blast/core/blast_seg.h [new file with mode: 0644] blob
c++/include/algo/blast/core/blast_seqsrc.h [new file with mode: 0644] blob
c++/include/algo/blast/core/blast_seqsrc_impl.h [new file with mode: 0644] blob
c++/include/algo/blast/core/blast_setup.h [new file with mode: 0644] blob
c++/include/algo/blast/core/blast_stat.h [new file with mode: 0644] blob
c++/include/algo/blast/core/blast_sw.h [new file with mode: 0644] blob
c++/include/algo/blast/core/blast_toolkit.h [new file with mode: 0644] blob
c++/include/algo/blast/core/blast_traceback.h [new file with mode: 0644] blob
c++/include/algo/blast/core/blast_tune.h [new file with mode: 0644] blob
c++/include/algo/blast/core/blast_util.h [new file with mode: 0644] blob
c++/include/algo/blast/core/gapinfo.h [new file with mode: 0644] blob
c++/include/algo/blast/core/gencode_singleton.h [new file with mode: 0644] blob
c++/include/algo/blast/core/greedy_align.h [new file with mode: 0644] blob
c++/include/algo/blast/core/hspfilter_besthit.h [new file with mode: 0644] blob
c++/include/algo/blast/core/hspfilter_collector.h [new file with mode: 0644] blob
c++/include/algo/blast/core/hspfilter_culling.h [new file with mode: 0644] blob
c++/include/algo/blast/core/hspfilter_mapper.h [new file with mode: 0644] blob
c++/include/algo/blast/core/link_hsps.h [new file with mode: 0644] blob
c++/include/algo/blast/core/lookup_util.h [new file with mode: 0644] blob
c++/include/algo/blast/core/lookup_wrap.h [new file with mode: 0644] blob
c++/include/algo/blast/core/mb_indexed_lookup.h [new file with mode: 0644] blob
c++/include/algo/blast/core/na_ungapped.h [new file with mode: 0644] blob
c++/include/algo/blast/core/ncbi_math.h [new file with mode: 0644] blob
c++/include/algo/blast/core/ncbi_std.h [new file with mode: 0644] blob
c++/include/algo/blast/core/pattern.h [new file with mode: 0644] blob
c++/include/algo/blast/core/phi_extend.h [new file with mode: 0644] blob
c++/include/algo/blast/core/phi_gapalign.h [new file with mode: 0644] blob
c++/include/algo/blast/core/phi_lookup.h [new file with mode: 0644] blob
c++/include/algo/blast/core/spliced_hits.h [new file with mode: 0644] blob
c++/include/algo/blast/core/split_query.h [new file with mode: 0644] blob
c++/include/algo/blast/dbindex/dbindex.hpp [new file with mode: 0644] blob
c++/include/algo/blast/dbindex/dbindex_sp.hpp [new file with mode: 0644] blob
c++/include/algo/blast/dbindex/sequence_istream.hpp [new file with mode: 0644] blob
c++/include/algo/blast/dbindex/sequence_istream_bdb.hpp [new file with mode: 0644] blob
c++/include/algo/blast/dbindex/sequence_istream_fasta.hpp [new file with mode: 0644] blob
c++/include/algo/blast/format/blast_async_format.hpp [new file with mode: 0644] blob
c++/include/algo/blast/format/blast_format.hpp [new file with mode: 0644] blob
c++/include/algo/blast/format/blastfmtutil.hpp [new file with mode: 0644] blob
c++/include/algo/blast/format/blastxml2_format.hpp [new file with mode: 0644] blob
c++/include/algo/blast/format/blastxml_format.hpp [new file with mode: 0644] blob
c++/include/algo/blast/format/build_archive.hpp [new file with mode: 0644] blob
c++/include/algo/blast/format/data4xml2format.hpp [new file with mode: 0644] blob
c++/include/algo/blast/format/data4xmlformat.hpp [new file with mode: 0644] blob
c++/include/algo/blast/format/sam.hpp [new file with mode: 0644] blob
c++/include/algo/blast/format/vecscreen_run.hpp [new file with mode: 0644] blob
c++/include/algo/blast/igblast/igblast.hpp [new file with mode: 0644] blob
c++/include/algo/blast/proteinkmer/blastkmer.hpp [new file with mode: 0644] blob
c++/include/algo/blast/proteinkmer/blastkmerindex.hpp [new file with mode: 0644] blob
c++/include/algo/blast/proteinkmer/blastkmeroptions.hpp [new file with mode: 0644] blob
c++/include/algo/blast/proteinkmer/blastkmerresults.hpp [new file with mode: 0644] blob
c++/include/algo/blast/proteinkmer/blastkmerutils.hpp [new file with mode: 0644] blob
c++/include/algo/blast/proteinkmer/kblastapi.hpp [new file with mode: 0644] blob
c++/include/algo/blast/proteinkmer/mhfile.hpp [new file with mode: 0644] blob
c++/include/algo/dustmask/sdust.tex [new file with mode: 0755] blob
c++/include/algo/dustmask/symdust.hpp [new file with mode: 0644] blob
c++/include/algo/segmask/segmask.hpp [new file with mode: 0644] blob
c++/include/algo/winmask/README.API [new file with mode: 0644] blob
c++/include/algo/winmask/seq_masker.hpp [new file with mode: 0644] blob
c++/include/algo/winmask/seq_masker_cache_boost.hpp [new file with mode: 0644] blob
c++/include/algo/winmask/seq_masker_istat.hpp [new file with mode: 0644] blob
c++/include/algo/winmask/seq_masker_istat_ascii.hpp [new file with mode: 0644] blob
c++/include/algo/winmask/seq_masker_istat_bin.hpp [new file with mode: 0644] blob
c++/include/algo/winmask/seq_masker_istat_factory.hpp [new file with mode: 0644] blob
c++/include/algo/winmask/seq_masker_istat_oascii.hpp [new file with mode: 0644] blob
c++/include/algo/winmask/seq_masker_istat_obinary.hpp [new file with mode: 0644] blob
c++/include/algo/winmask/seq_masker_ostat.hpp [new file with mode: 0644] blob
c++/include/algo/winmask/seq_masker_ostat_ascii.hpp [new file with mode: 0644] blob
c++/include/algo/winmask/seq_masker_ostat_bin.hpp [new file with mode: 0644] blob
c++/include/algo/winmask/seq_masker_ostat_factory.hpp [new file with mode: 0644] blob
c++/include/algo/winmask/seq_masker_ostat_opt.hpp [new file with mode: 0644] blob
c++/include/algo/winmask/seq_masker_ostat_opt_ascii.hpp [new file with mode: 0644] blob
c++/include/algo/winmask/seq_masker_ostat_opt_bin.hpp [new file with mode: 0644] blob
c++/include/algo/winmask/seq_masker_score.hpp [new file with mode: 0644] blob
c++/include/algo/winmask/seq_masker_score_mean.hpp [new file with mode: 0644] blob
c++/include/algo/winmask/seq_masker_score_mean_glob.hpp [new file with mode: 0644] blob
c++/include/algo/winmask/seq_masker_score_min.hpp [new file with mode: 0644] blob
c++/include/algo/winmask/seq_masker_uset_array.hpp [new file with mode: 0644] blob
c++/include/algo/winmask/seq_masker_uset_hash.hpp [new file with mode: 0644] blob
c++/include/algo/winmask/seq_masker_uset_simple.hpp [new file with mode: 0644] blob
c++/include/algo/winmask/seq_masker_util.hpp [new file with mode: 0644] blob
c++/include/algo/winmask/seq_masker_version.hpp [new file with mode: 0644] blob
c++/include/algo/winmask/seq_masker_window.hpp [new file with mode: 0644] blob
c++/include/algo/winmask/seq_masker_window_ambig.hpp [new file with mode: 0644] blob
c++/include/algo/winmask/seq_masker_window_pattern.hpp [new file with mode: 0644] blob
c++/include/algo/winmask/seq_masker_window_pattern_ambig.hpp [new file with mode: 0644] blob
c++/include/algo/winmask/win_mask_config.hpp [new file with mode: 0644] blob
c++/include/algo/winmask/win_mask_counts_converter.hpp [new file with mode: 0644] blob
c++/include/algo/winmask/win_mask_dup_table.hpp [new file with mode: 0644] blob
c++/include/algo/winmask/win_mask_gen_counts.hpp [new file with mode: 0644] blob
c++/include/algo/winmask/win_mask_util.hpp [new file with mode: 0644] blob
c++/include/cgi/caf.hpp [new file with mode: 0644] blob
c++/include/cgi/cgi_exception.hpp [new file with mode: 0644] blob
c++/include/cgi/cgi_serial.hpp [new file with mode: 0644] blob
c++/include/cgi/cgi_session.hpp [new file with mode: 0644] blob
c++/include/cgi/cgi_util.hpp [new file with mode: 0644] blob
c++/include/cgi/cgiapp.hpp [new file with mode: 0644] blob
c++/include/cgi/cgiapp_cached.hpp [new file with mode: 0644] blob
c++/include/cgi/cgictx.hpp [new file with mode: 0644] blob
c++/include/cgi/error_codes.hpp [new file with mode: 0644] blob
c++/include/cgi/impl/cgi_entry_reader.hpp [new file with mode: 0644] blob
c++/include/cgi/ncbicgi.hpp [new file with mode: 0644] blob
c++/include/cgi/ncbicgir.hpp [new file with mode: 0644] blob
c++/include/cgi/ncbires.hpp [new file with mode: 0644] blob
c++/include/cgi/ref_args.hpp [new file with mode: 0644] blob
c++/include/cgi/user_agent.hpp [new file with mode: 0644] blob
c++/include/common/boost_skew_guard.hpp [new file with mode: 0644] blob
c++/include/common/config/ncbiconf_msvc.h [new file with mode: 0644] blob
c++/include/common/config/ncbiconf_msvc_site.h.in [new file with mode: 0644] blob
c++/include/common/config/ncbiconf_universal.h [new file with mode: 0644] blob
c++/include/common/config/ncbiconf_xcode.h [new file with mode: 0644] blob
c++/include/common/header_template.hpp [new file with mode: 0644] blob
c++/include/common/metamodules_doxygen.h [new file with mode: 0644] blob
c++/include/common/ncbi_build_info.h [new file with mode: 0644] blob
c++/include/common/ncbi_build_ver.h.in [new file with mode: 0644] blob
c++/include/common/ncbi_export.h [new file with mode: 0644] blob
c++/include/common/ncbi_package_ver.h [new file with mode: 0644] blob
c++/include/common/ncbi_pch_impl.hpp [new file with mode: 0644] blob
c++/include/common/ncbi_revision.h.in [new file with mode: 0644] blob
c++/include/common/ncbi_sanitizers.h [new file with mode: 0644] blob
c++/include/common/ncbi_skew_guard.h [new file with mode: 0644] blob
c++/include/common/ncbi_source_ver.cmake_nodep [new file with mode: 0644] blob
c++/include/common/ncbi_source_ver.h [new file with mode: 0644] blob
c++/include/common/ncbiconf_impl.h [new file with mode: 0644] blob
c++/include/common/test_assert.h [new file with mode: 0644] blob
c++/include/common/test_assert_impl.h [new file with mode: 0644] blob
c++/include/common/test_data_path.h [new file with mode: 0644] blob
c++/include/connect/connect_export.h [new file with mode: 0644] blob
c++/include/connect/email_diag_handler.hpp [new file with mode: 0644] blob
c++/include/connect/error_codes.hpp [new file with mode: 0644] blob
c++/include/connect/impl/connect_misc.hpp [new file with mode: 0644] blob
c++/include/connect/impl/ncbi_uv_nghttp2.hpp [new file with mode: 0644] blob
c++/include/connect/impl/server_connection.hpp [new file with mode: 0644] blob
c++/include/connect/impl/thread_pool_for_server.hpp [new file with mode: 0644] blob
c++/include/connect/ncbi_base64.h [new file with mode: 0644] blob
c++/include/connect/ncbi_blowfish.h [new file with mode: 0644] blob
c++/include/connect/ncbi_buffer.h [new file with mode: 0644] blob
c++/include/connect/ncbi_conn_exception.hpp [new file with mode: 0644] blob
c++/include/connect/ncbi_conn_reader_writer.hpp [new file with mode: 0644] blob
c++/include/connect/ncbi_conn_stream.hpp [new file with mode: 0644] blob
c++/include/connect/ncbi_conn_test.hpp [new file with mode: 0644] blob
c++/include/connect/ncbi_connection.h [new file with mode: 0644] blob
c++/include/connect/ncbi_connector.h [new file with mode: 0644] blob
c++/include/connect/ncbi_connutil.h [new file with mode: 0644] blob
c++/include/connect/ncbi_core.h [new file with mode: 0644] blob
c++/include/connect/ncbi_core_cxx.hpp [new file with mode: 0644] blob
c++/include/connect/ncbi_file_connector.h [new file with mode: 0644] blob
c++/include/connect/ncbi_ftp_connector.h [new file with mode: 0644] blob
c++/include/connect/ncbi_gnutls.h [new file with mode: 0644] blob
c++/include/connect/ncbi_heapmgr.h [new file with mode: 0644] blob
c++/include/connect/ncbi_host_info.h [new file with mode: 0644] blob
c++/include/connect/ncbi_http2_session.hpp [new file with mode: 0644] blob
c++/include/connect/ncbi_http_connector.h [new file with mode: 0644] blob
c++/include/connect/ncbi_http_session.hpp [new file with mode: 0644] blob
c++/include/connect/ncbi_iprange.h [new file with mode: 0644] blob
c++/include/connect/ncbi_ipv6.h [new file with mode: 0644] blob
c++/include/connect/ncbi_lbos.hpp [new file with mode: 0644] blob
c++/include/connect/ncbi_localip.h [new file with mode: 0644] blob
c++/include/connect/ncbi_localip.hpp [new file with mode: 0644] blob
c++/include/connect/ncbi_mbedtls.h [new file with mode: 0644] blob
c++/include/connect/ncbi_memory_connector.h [new file with mode: 0644] blob
c++/include/connect/ncbi_misc.hpp [new file with mode: 0644] blob
c++/include/connect/ncbi_monkey.hpp [new file with mode: 0644] blob
c++/include/connect/ncbi_namedpipe.hpp [new file with mode: 0644] blob
c++/include/connect/ncbi_namedpipe_connector.hpp [new file with mode: 0644] blob
c++/include/connect/ncbi_pipe.hpp [new file with mode: 0644] blob
c++/include/connect/ncbi_pipe_connector.hpp [new file with mode: 0644] blob
c++/include/connect/ncbi_sendmail.h [new file with mode: 0644] blob
c++/include/connect/ncbi_server_info.h [new file with mode: 0644] blob
c++/include/connect/ncbi_service.h [new file with mode: 0644] blob
c++/include/connect/ncbi_service.hpp [new file with mode: 0644] blob
c++/include/connect/ncbi_service_connector.h [new file with mode: 0644] blob
c++/include/connect/ncbi_service_cxx.hpp [new file with mode: 0644] blob
c++/include/connect/ncbi_socket.h [new file with mode: 0644] blob
c++/include/connect/ncbi_socket.hpp [new file with mode: 0644] blob
c++/include/connect/ncbi_socket_connector.h [new file with mode: 0644] blob
c++/include/connect/ncbi_socket_unix.h [new file with mode: 0644] blob
c++/include/connect/ncbi_socket_unix.hpp [new file with mode: 0644] blob
c++/include/connect/ncbi_tls.h [new file with mode: 0644] blob
c++/include/connect/ncbi_types.h [new file with mode: 0644] blob
c++/include/connect/ncbi_usage_report.hpp [new file with mode: 0644] blob
c++/include/connect/ncbi_userhost.hpp [new file with mode: 0644] blob
c++/include/connect/ncbi_util.h [new file with mode: 0644] blob
c++/include/connect/server.hpp [new file with mode: 0644] blob
c++/include/connect/server_monitor.hpp [new file with mode: 0644] blob
c++/include/connect/services/blob_storage_netcache.hpp [new file with mode: 0644] blob
c++/include/connect/services/clparser.hpp [new file with mode: 0644] blob
c++/include/connect/services/compound_id.hpp [new file with mode: 0644] blob
c++/include/connect/services/error_codes.hpp [new file with mode: 0644] blob
c++/include/connect/services/grid_app_version_info.hpp [new file with mode: 0644] blob
c++/include/connect/services/grid_client.hpp [new file with mode: 0644] blob
c++/include/connect/services/grid_client_app.hpp [new file with mode: 0644] blob
c++/include/connect/services/grid_globals.hpp [new file with mode: 0644] blob
c++/include/connect/services/grid_rw_impl.hpp [new file with mode: 0644] blob
c++/include/connect/services/grid_worker.hpp [new file with mode: 0644] blob
c++/include/connect/services/grid_worker_app.hpp [new file with mode: 0644] blob
c++/include/connect/services/impl/netcache_api_int.hpp [new file with mode: 0644] blob
c++/include/connect/services/impl/neticache_client_int.hpp [new file with mode: 0644] blob
c++/include/connect/services/impl/netschedule_api_int.hpp [new file with mode: 0644] blob
c++/include/connect/services/impl/netstorage_impl.hpp [new file with mode: 0644] blob
c++/include/connect/services/impl/netstorage_int.hpp [new file with mode: 0644] blob
c++/include/connect/services/json_over_uttp.hpp [new file with mode: 0644] blob
c++/include/connect/services/named_parameters.hpp [new file with mode: 0644] blob
c++/include/connect/services/netcache_admin.hpp [new file with mode: 0644] blob
c++/include/connect/services/netcache_api.hpp [new file with mode: 0644] blob
c++/include/connect/services/netcache_api_expt.hpp [new file with mode: 0644] blob
c++/include/connect/services/netcache_key.hpp [new file with mode: 0644] blob
c++/include/connect/services/netcache_search.hpp [new file with mode: 0644] blob
c++/include/connect/services/netcomponent.hpp [new file with mode: 0644] blob
c++/include/connect/services/neticache_client.hpp [new file with mode: 0644] blob
c++/include/connect/services/netschedule_api.hpp [new file with mode: 0644] blob
c++/include/connect/services/netschedule_api_expt.hpp [new file with mode: 0644] blob
c++/include/connect/services/netschedule_key.hpp [new file with mode: 0644] blob
c++/include/connect/services/netservice_api.hpp [new file with mode: 0644] blob
c++/include/connect/services/netservice_api_expt.hpp [new file with mode: 0644] blob
c++/include/connect/services/netservice_protocol_parser.hpp [new file with mode: 0644] blob
c++/include/connect/services/netstorage.hpp [new file with mode: 0644] blob
c++/include/connect/services/netstorage_ft.hpp [new file with mode: 0644] blob
c++/include/connect/services/ns_client_factory.hpp [new file with mode: 0644] blob
c++/include/connect/services/ns_job_serializer.hpp [new file with mode: 0644] blob
c++/include/connect/services/ns_output_parser.hpp [new file with mode: 0644] blob
c++/include/connect/services/remote_app.hpp [new file with mode: 0644] blob
c++/include/connect/services/srv_connections.hpp [new file with mode: 0644] blob
c++/include/connect/services/srv_connections_expt.hpp [new file with mode: 0644] blob
c++/include/connect/services/util.hpp [new file with mode: 0644] blob
c++/include/connect/threaded_server.hpp [new file with mode: 0644] blob
c++/include/corelib/blob_storage.hpp [new file with mode: 0644] blob
c++/include/corelib/ddumpable.hpp [new file with mode: 0644] blob
c++/include/corelib/env_reg.hpp [new file with mode: 0644] blob
c++/include/corelib/error_codes.hpp [new file with mode: 0644] blob
c++/include/corelib/expr.hpp [new file with mode: 0644] blob
c++/include/corelib/guard.hpp [new file with mode: 0644] blob
c++/include/corelib/hash_impl/_hash_fun.h [new file with mode: 0644] blob
c++/include/corelib/hash_impl/_hash_map.h [new file with mode: 0644] blob
c++/include/corelib/hash_impl/_hash_set.h [new file with mode: 0644] blob
c++/include/corelib/hash_impl/_hashtable.c [new file with mode: 0644] blob
c++/include/corelib/hash_impl/_hashtable.h [new file with mode: 0644] blob
c++/include/corelib/hash_impl/_relops_hash_cont.h [new file with mode: 0644] blob
c++/include/corelib/hash_impl/stlp_defs.hpp [new file with mode: 0644] blob
c++/include/corelib/hash_map.hpp [new file with mode: 0644] blob
c++/include/corelib/hash_set.hpp [new file with mode: 0644] blob
c++/include/corelib/impl/listener_stack.hpp [new file with mode: 0644] blob
c++/include/corelib/impl/ncbi_atomic_defs.h [new file with mode: 0644] blob
c++/include/corelib/impl/ncbi_dbsvcmapper.hpp [new file with mode: 0644] blob
c++/include/corelib/impl/ncbi_java.h [new file with mode: 0644] blob
c++/include/corelib/impl/ncbi_os_mswin.h [new file with mode: 0644] blob
c++/include/corelib/impl/ncbi_panfs.h [new file with mode: 0644] blob
c++/include/corelib/impl/ncbi_param_impl.hpp [new file with mode: 0644] blob
c++/include/corelib/impl/ncbi_toolkit_impl.hpp [new file with mode: 0644] blob
c++/include/corelib/impl/ncbierror_impl.hpp [new file with mode: 0644] blob
c++/include/corelib/impl/rwstreambuf.hpp [new file with mode: 0644] blob
c++/include/corelib/impl/stringutf8_deprecated.hpp [new file with mode: 0644] blob
c++/include/corelib/impl/stringutf8_deprecated.inl [new file with mode: 0644] blob
c++/include/corelib/interprocess_lock.hpp [new file with mode: 0644] blob
c++/include/corelib/metareg.hpp [new file with mode: 0644] blob
c++/include/corelib/mswin_export.h [new file with mode: 0644] blob
c++/include/corelib/mswin_no_popup.h [new file with mode: 0644] blob
c++/include/corelib/ncbi_autoinit.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbi_base64.h [new file with mode: 0644] blob
c++/include/corelib/ncbi_bswap.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbi_config.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbi_cookies.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbi_fast.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbi_limits.h [new file with mode: 0644] blob
c++/include/corelib/ncbi_limits.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbi_mask.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbi_message.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbi_os_mswin.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbi_os_unix.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbi_param.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbi_pool_balancer.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbi_process.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbi_safe_static.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbi_signal.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbi_stack.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbi_strings.h [new file with mode: 0644] blob
c++/include/corelib/ncbi_system.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbi_toolkit.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbi_tree.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbi_url.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbi_xstr.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbiapp.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbiapp_api.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbiargs.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbiatomic.h [new file with mode: 0644] blob
c++/include/corelib/ncbiatomic.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbicfg.h [new file with mode: 0644] blob
c++/include/corelib/ncbicntr.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbictype.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbidbg.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbidiag.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbidiag.inl [new file with mode: 0644] blob
c++/include/corelib/ncbidll.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbienv.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbierror.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbiexec.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbiexpt.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbifile.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbifloat.h [new file with mode: 0644] blob
c++/include/corelib/ncbimempool.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbimisc.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbimtx.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbimtx.inl [new file with mode: 0644] blob
c++/include/corelib/ncbiobj.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbireg.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbistd.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbistl.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbistr.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbistr_util.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbistre.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbisys.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbithr.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbithr_conf.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbitime.hpp [new file with mode: 0644] blob
c++/include/corelib/ncbitype.h [new file with mode: 0644] blob
c++/include/corelib/ncbiutil.hpp [new file with mode: 0644] blob
c++/include/corelib/obj_pool.hpp [new file with mode: 0644] blob
c++/include/corelib/obj_store.hpp [new file with mode: 0644] blob
c++/include/corelib/perf_log.hpp [new file with mode: 0644] blob
c++/include/corelib/plugin_manager.hpp [new file with mode: 0644] blob
c++/include/corelib/plugin_manager_impl.hpp [new file with mode: 0644] blob
c++/include/corelib/plugin_manager_store.hpp [new file with mode: 0644] blob
c++/include/corelib/reader_writer.hpp [new file with mode: 0644] blob
c++/include/corelib/request_control.hpp [new file with mode: 0644] blob
c++/include/corelib/request_ctx.hpp [new file with mode: 0644] blob
c++/include/corelib/request_status.hpp [new file with mode: 0644] blob
c++/include/corelib/resource_info.hpp [new file with mode: 0644] blob
c++/include/corelib/rwstream.hpp [new file with mode: 0644] blob
c++/include/corelib/stream_utils.hpp [new file with mode: 0644] blob
c++/include/corelib/syslog.hpp [new file with mode: 0644] blob
c++/include/corelib/teamcity_messages.h [new file with mode: 0644] blob
c++/include/corelib/tempstr.hpp [new file with mode: 0644] blob
c++/include/corelib/test_boost.hpp [new file with mode: 0644] blob
c++/include/corelib/test_mt.hpp [new file with mode: 0644] blob
c++/include/corelib/version.hpp [new file with mode: 0644] blob
c++/include/corelib/version_api.hpp [new file with mode: 0644] blob
c++/include/db/error_codes.hpp [new file with mode: 0644] blob
c++/include/db/sqlite/sqlitewrapp.hpp [new file with mode: 0644] blob
c++/include/dbapi/dbapi.hpp [new file with mode: 0644] blob
c++/include/dbapi/dbapi_variant_convert.hpp [new file with mode: 0644] blob
c++/include/dbapi/driver/dbapi_conn_factory.hpp [new file with mode: 0644] blob
c++/include/dbapi/driver/dbapi_driver_conn_mgr.hpp [new file with mode: 0644] blob
c++/include/dbapi/driver/dbapi_driver_conn_params.hpp [new file with mode: 0644] blob
c++/include/dbapi/driver/dbapi_driver_convert.hpp [new file with mode: 0644] blob
c++/include/dbapi/driver/dbapi_object_convert.hpp [new file with mode: 0644] blob
c++/include/dbapi/driver/dbapi_svc_mapper.hpp [new file with mode: 0644] blob
c++/include/dbapi/driver/driver_mgr.hpp [new file with mode: 0644] blob
c++/include/dbapi/driver/drivers.hpp [new file with mode: 0644] blob
c++/include/dbapi/driver/exception.hpp [new file with mode: 0644] blob
c++/include/dbapi/driver/impl/dbapi_driver_utils.hpp [new file with mode: 0644] blob
c++/include/dbapi/driver/impl/dbapi_impl_cmd.hpp [new file with mode: 0644] blob
c++/include/dbapi/driver/impl/dbapi_impl_connection.hpp [new file with mode: 0644] blob
c++/include/dbapi/driver/impl/dbapi_impl_context.hpp [new file with mode: 0644] blob
c++/include/dbapi/driver/impl/dbapi_impl_result.hpp [new file with mode: 0644] blob
c++/include/dbapi/driver/impl/dbapi_pool_balancer.hpp [new file with mode: 0644] blob
c++/include/dbapi/driver/impl/handle_stack.hpp [new file with mode: 0644] blob
c++/include/dbapi/driver/interfaces.hpp [new file with mode: 0644] blob
c++/include/dbapi/driver/odbc/interfaces.hpp [new file with mode: 0644] blob
c++/include/dbapi/driver/odbc/unix_odbc/odbcinst.h [new file with mode: 0644] blob
c++/include/dbapi/driver/odbc/unix_odbc/sql.h [new file with mode: 0644] blob
c++/include/dbapi/driver/odbc/unix_odbc/sqlext.h [new file with mode: 0644] blob
c++/include/dbapi/driver/odbc/unix_odbc/sqlfront.h [new file with mode: 0644] blob
c++/include/dbapi/driver/odbc/unix_odbc/sqlspi.h [new file with mode: 0644] blob
c++/include/dbapi/driver/odbc/unix_odbc/sqltypes.h [new file with mode: 0644] blob
c++/include/dbapi/driver/odbc/unix_odbc/sqlucode.h [new file with mode: 0644] blob
c++/include/dbapi/driver/odbc/unix_odbc/unixodbc_conf.h [new file with mode: 0644] blob
c++/include/dbapi/driver/public.hpp [new file with mode: 0644] blob
c++/include/dbapi/driver/types.hpp [new file with mode: 0644] blob
c++/include/dbapi/driver/util/blobstore.hpp [new file with mode: 0644] blob
c++/include/dbapi/driver/util/numeric_convert.hpp [new file with mode: 0644] blob
c++/include/dbapi/driver/util/parameters.hpp [new file with mode: 0644] blob
c++/include/dbapi/driver/util/pointer_pot.hpp [new file with mode: 0644] blob
c++/include/dbapi/driver_mgr.hpp [new file with mode: 0644] blob
c++/include/dbapi/error_codes.hpp [new file with mode: 0644] blob
c++/include/dbapi/variant.hpp [new file with mode: 0644] blob
c++/include/html/commentdiag.hpp [new file with mode: 0644] blob
c++/include/html/components.hpp [new file with mode: 0644] blob
c++/include/html/components.inl [new file with mode: 0644] blob
c++/include/html/error_codes.hpp [new file with mode: 0644] blob
c++/include/html/factory.hpp [new file with mode: 0644] blob
c++/include/html/html.hpp [new file with mode: 0644] blob
c++/include/html/html.inl [new file with mode: 0644] blob
c++/include/html/html_exception.hpp [new file with mode: 0644] blob
c++/include/html/htmlhelper.hpp [new file with mode: 0644] blob
c++/include/html/indentstream.hpp [new file with mode: 0644] blob
c++/include/html/node.hpp [new file with mode: 0644] blob
c++/include/html/node.inl [new file with mode: 0644] blob
c++/include/html/nodemap.hpp [new file with mode: 0644] blob
c++/include/html/page.hpp [new file with mode: 0644] blob
c++/include/html/pager.hpp [new file with mode: 0644] blob
c++/include/html/selection.hpp [new file with mode: 0644] blob
c++/include/html/writer_htmlenc.hpp [new file with mode: 0644] blob
c++/include/misc/error_codes.hpp [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/jsonwrapp.hpp [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/jsonwrapp10.hpp [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/jsonwrapp11.hpp [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson10/__NCBI_read_me.txt [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson10/allocators.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson10/document.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson10/encodedstream.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson10/encodings.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson10/error/en.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson10/error/error.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson10/filereadstream.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson10/filewritestream.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson10/internal/biginteger.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson10/internal/diyfp.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson10/internal/dtoa.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson10/internal/ieee754.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson10/internal/itoa.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson10/internal/meta.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson10/internal/pow10.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson10/internal/stack.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson10/internal/strfunc.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson10/internal/strtod.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson10/license.txt [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson10/memorybuffer.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson10/memorystream.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson10/msinttypes/inttypes.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson10/msinttypes/stdint.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson10/pointer.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson10/prettywriter.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson10/rapidjson.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson10/reader.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson10/stringbuffer.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson10/writer.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson11/__NCBI_read_me.txt [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson11/allocators.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson11/document.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson11/encodedstream.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson11/encodings.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson11/error/en.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson11/error/error.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson11/filereadstream.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson11/filewritestream.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson11/fwd.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson11/internal/biginteger.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson11/internal/diyfp.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson11/internal/dtoa.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson11/internal/ieee754.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson11/internal/itoa.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson11/internal/meta.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson11/internal/pow10.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson11/internal/regex.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson11/internal/stack.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson11/internal/strfunc.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson11/internal/strtod.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson11/internal/swap.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson11/istreamwrapper.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson11/license.txt [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson11/memorybuffer.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson11/memorystream.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson11/msinttypes/inttypes.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson11/msinttypes/stdint.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson11/ostreamwrapper.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson11/pointer.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson11/prettywriter.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson11/rapidjson.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson11/reader.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson11/schema.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson11/stream.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson11/stringbuffer.h [new file with mode: 0644] blob
c++/include/misc/jsonwrapp/rapidjson11/writer.h [new file with mode: 0644] blob
c++/include/ncbi_pch.hpp [new file with mode: 0644] blob
c++/include/ncbi_source_ver.h [new file with mode: 0644] blob
c++/include/ncbiconf.h [new file with mode: 0644] blob
c++/include/objects/biblio/Affil.hpp [new file with mode: 0644] blob
c++/include/objects/biblio/Auth_list.hpp [new file with mode: 0644] blob
c++/include/objects/biblio/Author.hpp [new file with mode: 0644] blob
c++/include/objects/biblio/Cit_art.hpp [new file with mode: 0644] blob
c++/include/objects/biblio/Cit_book.hpp [new file with mode: 0644] blob
c++/include/objects/biblio/Cit_gen.hpp [new file with mode: 0644] blob
c++/include/objects/biblio/Cit_jour.hpp [new file with mode: 0644] blob
c++/include/objects/biblio/Cit_let.hpp [new file with mode: 0644] blob
c++/include/objects/biblio/Cit_pat.hpp [new file with mode: 0644] blob
c++/include/objects/biblio/Cit_proc.hpp [new file with mode: 0644] blob
c++/include/objects/biblio/Cit_sub.hpp [new file with mode: 0644] blob
c++/include/objects/biblio/Id_pat.hpp [new file with mode: 0644] blob
c++/include/objects/biblio/MedlineUID.hpp [new file with mode: 0644] blob
c++/include/objects/biblio/PmcID.hpp [new file with mode: 0644] blob
c++/include/objects/biblio/PubMedId.hpp [new file with mode: 0644] blob
c++/include/objects/biblio/Title.hpp [new file with mode: 0644] blob
c++/include/objects/biblio/biblio_macros.hpp [new file with mode: 0644] blob
c++/include/objects/biblio/citation_base.hpp [new file with mode: 0644] blob
c++/include/objects/biotree/BioTreeContainer.hpp [new file with mode: 0644] blob
c++/include/objects/biotree/DistanceMatrix.hpp [new file with mode: 0644] blob
c++/include/objects/blast/.cvsignore.extra [new file with mode: 0644] blob
c++/include/objects/blast/Blast4_database.hpp [new file with mode: 0644] blob
c++/include/objects/blast/Blast4_parameters.hpp [new file with mode: 0644] blob
c++/include/objects/blast/Blast4_queries.hpp [new file with mode: 0644] blob
c++/include/objects/blast/Blast4_range.hpp [new file with mode: 0644] blob
c++/include/objects/blast/names.hpp [new file with mode: 0644] blob
c++/include/objects/blastdb/Blast_def_line.hpp [new file with mode: 0644] blob
c++/include/objects/blastdb/Blast_def_line_set.hpp [new file with mode: 0644] blob
c++/include/objects/blastdb/defline_extra.hpp [new file with mode: 0644] blob
c++/include/objects/cdd/Cdd.hpp [new file with mode: 0644] blob
c++/include/objects/dbsnp/primary_track/impl/snpptis_impl.hpp [new file with mode: 0644] blob
c++/include/objects/dbsnp/primary_track/snpptis.hpp [new file with mode: 0644] blob
c++/include/objects/entrez2/.cvsignore.extra [new file with mode: 0644] blob
c++/include/objects/entrez2/Entrez2_docsum.hpp [new file with mode: 0644] blob
c++/include/objects/entrez2/Entrez2_id_list.hpp [new file with mode: 0644] blob
c++/include/objects/entrez2/entrez2_client.hpp [new file with mode: 0644] blob
c++/include/objects/entrezgene/Entrezgene.hpp [new file with mode: 0644] blob
c++/include/objects/entrezgene/Gene_commentary.hpp [new file with mode: 0644] blob
c++/include/objects/gbproj/AbstractProjectItem.hpp [new file with mode: 0755] blob
c++/include/objects/gbproj/FolderInfo.hpp [new file with mode: 0755] blob
c++/include/objects/gbproj/GBProject_ver2.hpp [new file with mode: 0755] blob
c++/include/objects/gbproj/ProjectDescr.hpp [new file with mode: 0755] blob
c++/include/objects/gbproj/ProjectFolder.hpp [new file with mode: 0755] blob
c++/include/objects/gbproj/ProjectItem.hpp [new file with mode: 0755] blob
c++/include/objects/gbproj/gbproj_export.h [new file with mode: 0755] blob
c++/include/objects/gbproj/igbproject.hpp [new file with mode: 0755] blob
c++/include/objects/general/Date.hpp [new file with mode: 0644] blob
c++/include/objects/general/Date_std.hpp [new file with mode: 0644] blob
c++/include/objects/general/Dbtag.hpp [new file with mode: 0644] blob
c++/include/objects/general/Int_fuzz.hpp [new file with mode: 0644] blob
c++/include/objects/general/Name_std.hpp [new file with mode: 0644] blob
c++/include/objects/general/Object_id.hpp [new file with mode: 0644] blob
c++/include/objects/general/Person_id.hpp [new file with mode: 0644] blob
c++/include/objects/general/User_field.hpp [new file with mode: 0644] blob
c++/include/objects/general/User_object.hpp [new file with mode: 0644] blob
c++/include/objects/general/general_exception.hpp [new file with mode: 0644] blob
c++/include/objects/general/general_macros.hpp [new file with mode: 0644] blob
c++/include/objects/general/uoconv.hpp [new file with mode: 0644] blob
c++/include/objects/genomecoll/.cvsignore.extra [new file with mode: 0644] blob
c++/include/objects/genomecoll/GCClient_GetAssemblyBySequ.hpp [new file with mode: 0644] blob
c++/include/objects/genomecoll/GC_Assembly.hpp [new file with mode: 0644] blob
c++/include/objects/genomecoll/GC_AssemblySet.hpp [new file with mode: 0644] blob
c++/include/objects/genomecoll/GC_AssemblyUnit.hpp [new file with mode: 0644] blob
c++/include/objects/genomecoll/GC_Replicon.hpp [new file with mode: 0644] blob
c++/include/objects/genomecoll/GC_SeqIdAlias.hpp [new file with mode: 0644] blob
c++/include/objects/genomecoll/GC_Sequence.hpp [new file with mode: 0644] blob
c++/include/objects/genomecoll/cached_assembly.hpp [new file with mode: 0644] blob
c++/include/objects/genomecoll/genomic_collections_cli.hpp [new file with mode: 0644] blob
c++/include/objects/homologene/HG_Entry.hpp [new file with mode: 0644] blob
c++/include/objects/homologene/HG_Gene.hpp [new file with mode: 0644] blob
c++/include/objects/id1/.cvsignore.extra [new file with mode: 0644] blob
c++/include/objects/id1/ID1server_back.hpp [new file with mode: 0644] blob
c++/include/objects/id1/id1_client.hpp [new file with mode: 0644] blob
c++/include/objects/id2/ID2_Reply_Data.hpp [new file with mode: 0644] blob
c++/include/objects/id2/id2_client.hpp [new file with mode: 0644] blob
c++/include/objects/id2/id2processor.hpp [new file with mode: 0644] blob
c++/include/objects/id2/id2processor_interface.hpp [new file with mode: 0644] blob
c++/include/objects/macro/Constraint_choice.hpp [new file with mode: 0644] blob
c++/include/objects/macro/Constraint_choice_set.hpp [new file with mode: 0644] blob
c++/include/objects/macro/Feat_qual_choice.hpp [new file with mode: 0644] blob
c++/include/objects/macro/Feature_field.hpp [new file with mode: 0644] blob
c++/include/objects/macro/Field_constraint.hpp [new file with mode: 0644] blob
c++/include/objects/macro/Field_type.hpp [new file with mode: 0644] blob
c++/include/objects/macro/Location_constraint.hpp [new file with mode: 0644] blob
c++/include/objects/macro/Location_pos_constraint.hpp [new file with mode: 0644] blob
c++/include/objects/macro/Molinfo_field.hpp [new file with mode: 0644] blob
c++/include/objects/macro/Replace_func.hpp [new file with mode: 0644] blob
c++/include/objects/macro/Replace_rule.hpp [new file with mode: 0644] blob
c++/include/objects/macro/Rna_feat_type.hpp [new file with mode: 0644] blob
c++/include/objects/macro/Rna_qual.hpp [new file with mode: 0644] blob
c++/include/objects/macro/Search_func.hpp [new file with mode: 0644] blob
c++/include/objects/macro/Simple_replace.hpp [new file with mode: 0644] blob
c++/include/objects/macro/Source_qual_choice.hpp [new file with mode: 0644] blob
c++/include/objects/macro/String_constraint.hpp [new file with mode: 0644] blob
c++/include/objects/macro/Suspect_rule.hpp [new file with mode: 0644] blob
c++/include/objects/macro/Suspect_rule_set.hpp [new file with mode: 0644] blob
c++/include/objects/macro/Word_substitution.hpp [new file with mode: 0644] blob
c++/include/objects/medline/Medline_entry.hpp [new file with mode: 0644] blob
c++/include/objects/misc/error_codes.hpp [new file with mode: 0644] blob
c++/include/objects/misc/sequence_macros.hpp [new file with mode: 0644] blob
c++/include/objects/misc/sequence_util_macros.hpp [new file with mode: 0644] blob
c++/include/objects/mla/.cvsignore.extra [new file with mode: 0644] blob
c++/include/objects/mla/Error_val.hpp [new file with mode: 0644] blob
c++/include/objects/mla/mla_client.hpp [new file with mode: 0644] blob
c++/include/objects/mmdb1/Biostruc.hpp [new file with mode: 0644] blob
c++/include/objects/ncbimime/Ncbi_mime_asn1.hpp [new file with mode: 0644] blob
c++/include/objects/omssa/MSBioseqSet.hpp [new file with mode: 0644] blob
c++/include/objects/omssa/MSEnzymes.hpp [new file with mode: 0644] blob
c++/include/objects/omssa/MSHits.hpp [new file with mode: 0644] blob
c++/include/objects/omssa/MSIonType.hpp [new file with mode: 0644] blob
c++/include/objects/omssa/MSMod.hpp [new file with mode: 0644] blob
c++/include/objects/omssa/MSModSpecSet.hpp [new file with mode: 0644] blob
c++/include/objects/omssa/MSRequest.hpp [new file with mode: 0644] blob
c++/include/objects/omssa/MSResponse.hpp [new file with mode: 0644] blob
c++/include/objects/omssa/MSSearch.hpp [new file with mode: 0644] blob
c++/include/objects/omssa/MSSearchSettings.hpp [new file with mode: 0644] blob
c++/include/objects/omssa/MSSearchType.hpp [new file with mode: 0644] blob
c++/include/objects/pub/Pub.hpp [new file with mode: 0644] blob
c++/include/objects/pub/Pub_equiv.hpp [new file with mode: 0644] blob
c++/include/objects/pub/Pub_set.hpp [new file with mode: 0644] blob
c++/include/objects/pub/pub_macros.hpp [new file with mode: 0644] blob
c++/include/objects/remap/.cvsignore.extra [new file with mode: 0644] blob
c++/include/objects/remap/remap_client.hpp [new file with mode: 0644] blob
c++/include/objects/scoremat/FormatRpsDbParameters.hpp [new file with mode: 0644] blob
c++/include/objects/scoremat/Pssm.hpp [new file with mode: 0644] blob
c++/include/objects/scoremat/PssmWithParameters.hpp [new file with mode: 0644] blob
c++/include/objects/seq/Bioseq.hpp [new file with mode: 0644] blob
c++/include/objects/seq/Delta_ext.hpp [new file with mode: 0644] blob
c++/include/objects/seq/Linkage_evidence.hpp [new file with mode: 0644] blob
c++/include/objects/seq/MolInfo.hpp [new file with mode: 0644] blob
c++/include/objects/seq/Pubdesc.hpp [new file with mode: 0644] blob
c++/include/objects/seq/Seq_annot.hpp [new file with mode: 0644] blob
c++/include/objects/seq/Seq_data.hpp [new file with mode: 0644] blob
c++/include/objects/seq/Seq_descr.hpp [new file with mode: 0644] blob
c++/include/objects/seq/Seq_gap.hpp [new file with mode: 0644] blob
c++/include/objects/seq/Seq_inst.hpp [new file with mode: 0644] blob
c++/include/objects/seq/Seq_literal.hpp [new file with mode: 0644] blob
c++/include/objects/seq/Seqdesc.hpp [new file with mode: 0644] blob
c++/include/objects/seq/annot_mapper_exception.hpp [new file with mode: 0644] blob
c++/include/objects/seq/seq_align_mapper_base.hpp [new file with mode: 0644] blob
c++/include/objects/seq/seq_id_handle.hpp [new file with mode: 0644] blob
c++/include/objects/seq/seq_id_mapper.hpp [new file with mode: 0644] blob
c++/include/objects/seq/seq_loc_from_string.hpp [new file with mode: 0644] blob
c++/include/objects/seq/seq_loc_mapper_base.hpp [new file with mode: 0644] blob
c++/include/objects/seq/seq_loc_reverse_complementer.hpp [new file with mode: 0644] blob
c++/include/objects/seq/seq_macros.hpp [new file with mode: 0644] blob
c++/include/objects/seq/seqlocinfo.hpp [new file with mode: 0644] blob
c++/include/objects/seq/seqport_util.hpp [new file with mode: 0644] blob
c++/include/objects/seq/so_map.hpp [new file with mode: 0644] blob
c++/include/objects/seq/sofa_type.hpp [new file with mode: 0644] blob
c++/include/objects/seqalign/Dense_diag.hpp [new file with mode: 0644] blob
c++/include/objects/seqalign/Dense_seg.hpp [new file with mode: 0644] blob
c++/include/objects/seqalign/Product_pos.hpp [new file with mode: 0644] blob
c++/include/objects/seqalign/Prot_pos.hpp [new file with mode: 0644] blob
c++/include/objects/seqalign/Score.hpp [new file with mode: 0644] blob
c++/include/objects/seqalign/Seq_align.hpp [new file with mode: 0644] blob
c++/include/objects/seqalign/Seq_align_set.hpp [new file with mode: 0644] blob
c++/include/objects/seqalign/Sparse_align.hpp [new file with mode: 0644] blob
c++/include/objects/seqalign/Sparse_seg.hpp [new file with mode: 0644] blob
c++/include/objects/seqalign/Spliced_exon.hpp [new file with mode: 0644] blob
c++/include/objects/seqalign/Spliced_seg.hpp [new file with mode: 0644] blob
c++/include/objects/seqalign/Std_seg.hpp [new file with mode: 0644] blob
c++/include/objects/seqalign/seqalign_exception.hpp [new file with mode: 0644] blob
c++/include/objects/seqalign/seqalign_macros.hpp [new file with mode: 0644] blob
c++/include/objects/seqblock/GB_block.hpp [new file with mode: 0644] blob
c++/include/objects/seqblock/seqblock_macros.hpp [new file with mode: 0644] blob
c++/include/objects/seqedit/SeqEdit_Cmd.hpp [new file with mode: 0644] blob
c++/include/objects/seqfeat/BioSource.hpp [new file with mode: 0644] blob
c++/include/objects/seqfeat/Delta_item.hpp [new file with mode: 0644] blob
c++/include/objects/seqfeat/Gb_qual.hpp [new file with mode: 0644] blob
c++/include/objects/seqfeat/Gene_ref.hpp [new file with mode: 0644] blob
c++/include/objects/seqfeat/Genetic_code.hpp [new file with mode: 0644] blob
c++/include/objects/seqfeat/Genetic_code_table.hpp [new file with mode: 0644] blob
c++/include/objects/seqfeat/ISeq_feat.hpp [new file with mode: 0644] blob
c++/include/objects/seqfeat/Imp_feat.hpp [new file with mode: 0644] blob
c++/include/objects/seqfeat/OrgMod.hpp [new file with mode: 0644] blob
c++/include/objects/seqfeat/OrgName.hpp [new file with mode: 0644] blob
c++/include/objects/seqfeat/Org_ref.hpp [new file with mode: 0644] blob
c++/include/objects/seqfeat/PCRPrimerSeq.hpp [new file with mode: 0644] blob
c++/include/objects/seqfeat/Prot_ref.hpp [new file with mode: 0644] blob
c++/include/objects/seqfeat/RNA_gen.hpp [new file with mode: 0644] blob
c++/include/objects/seqfeat/RNA_ref.hpp [new file with mode: 0644] blob
c++/include/objects/seqfeat/SeqFeatData.hpp [new file with mode: 0644] blob
c++/include/objects/seqfeat/Seq_feat.hpp [new file with mode: 0644] blob
c++/include/objects/seqfeat/SubSource.hpp [new file with mode: 0644] blob
c++/include/objects/seqfeat/Trna_ext.hpp [new file with mode: 0644] blob
c++/include/objects/seqfeat/VariantProperties.hpp [new file with mode: 0644] blob
c++/include/objects/seqfeat/Variation_ref.hpp [new file with mode: 0644] blob
c++/include/objects/seqfeat/seqfeat_macros.hpp [new file with mode: 0644] blob
c++/include/objects/seqloc/Na_strand.hpp [new file with mode: 0644] blob
c++/include/objects/seqloc/PDB_seq_id.hpp [new file with mode: 0644] blob
c++/include/objects/seqloc/Packed_seqint.hpp [new file with mode: 0644] blob
c++/include/objects/seqloc/Packed_seqpnt.hpp [new file with mode: 0644] blob
c++/include/objects/seqloc/Patent_seq_id.hpp [new file with mode: 0644] blob
c++/include/objects/seqloc/Seq_bond.hpp [new file with mode: 0644] blob
c++/include/objects/seqloc/Seq_id.hpp [new file with mode: 0644] blob
c++/include/objects/seqloc/Seq_interval.hpp [new file with mode: 0644] blob
c++/include/objects/seqloc/Seq_loc.hpp [new file with mode: 0644] blob
c++/include/objects/seqloc/Seq_loc_equiv.hpp [new file with mode: 0644] blob
c++/include/objects/seqloc/Seq_loc_mix.hpp [new file with mode: 0644] blob
c++/include/objects/seqloc/Seq_point.hpp [new file with mode: 0644] blob
c++/include/objects/seqloc/Textseq_id.hpp [new file with mode: 0644] blob
c++/include/objects/seqloc/seqloc_macros.hpp [new file with mode: 0644] blob
c++/include/objects/seqres/Seq_graph.hpp [new file with mode: 0644] blob
c++/include/objects/seqset/Bioseq_set.hpp [new file with mode: 0644] blob
c++/include/objects/seqset/Seq_entry.hpp [new file with mode: 0644] blob
c++/include/objects/seqset/gb_release_file.hpp [new file with mode: 0644] blob
c++/include/objects/seqset/seqset_exception.hpp [new file with mode: 0644] blob
c++/include/objects/seqset/seqset_macros.hpp [new file with mode: 0644] blob
c++/include/objects/seqtable/BVector_data.hpp [new file with mode: 0644] blob
c++/include/objects/seqtable/Scaled_int_multi_data.hpp [new file with mode: 0644] blob
c++/include/objects/seqtable/Scaled_real_multi_data.hpp [new file with mode: 0644] blob
c++/include/objects/seqtable/SeqTable_column.hpp [new file with mode: 0644] blob
c++/include/objects/seqtable/SeqTable_column_info.hpp [new file with mode: 0644] blob
c++/include/objects/seqtable/SeqTable_multi_data.hpp [new file with mode: 0644] blob
c++/include/objects/seqtable/SeqTable_single_data.hpp [new file with mode: 0644] blob
c++/include/objects/seqtable/SeqTable_sparse_index.hpp [new file with mode: 0644] blob
c++/include/objects/seqtable/Seq_table.hpp [new file with mode: 0644] blob
c++/include/objects/seqtable/impl/delta_cache.hpp [new file with mode: 0644] blob
c++/include/objects/seqtable/seq_table_exception.hpp [new file with mode: 0644] blob
c++/include/objects/submit/Seq_submit.hpp [new file with mode: 0644] blob
c++/include/objects/submit/submit_macros.hpp [new file with mode: 0644] blob
c++/include/objects/taxon1/Taxon1_error.hpp [new file with mode: 0644] blob
c++/include/objects/taxon1/Taxon2_data.hpp [new file with mode: 0644] blob
c++/include/objects/taxon1/local_taxon.hpp [new file with mode: 0644] blob
c++/include/objects/taxon1/taxon1.hpp [new file with mode: 0644] blob
c++/include/objects/taxon3/T3Data.hpp [new file with mode: 0644] blob
c++/include/objects/taxon3/T3Error.hpp [new file with mode: 0644] blob
c++/include/objects/taxon3/cached_taxon3.hpp [new file with mode: 0755] blob
c++/include/objects/taxon3/itaxon3.hpp [new file with mode: 0644] blob
c++/include/objects/taxon3/taxon3.hpp [new file with mode: 0644] blob
c++/include/objects/trackmgr/TMgr_AnnotCounts.hpp [new file with mode: 0644] blob
c++/include/objects/trackmgr/TMgr_ClientInfo.hpp [new file with mode: 0644] blob
c++/include/objects/trackmgr/TMgr_DTrackId.hpp [new file with mode: 0644] blob
c++/include/objects/trackmgr/TMgr_DisplayTrackRequest.hpp [new file with mode: 0644] blob
c++/include/objects/trackmgr/TMgr_IdentityId.hpp [new file with mode: 0644] blob
c++/include/objects/trackmgr/TMgr_ItemResolverRequest.hpp [new file with mode: 0644] blob
c++/include/objects/trackmgr/TMgr_LengthStats.hpp [new file with mode: 0644] blob
c++/include/objects/trackmgr/TMgr_Message.hpp [new file with mode: 0644] blob
c++/include/objects/trackmgr/TMgr_PositionStats.hpp [new file with mode: 0644] blob
c++/include/objects/trackmgr/TMgr_Request.hpp [new file with mode: 0644] blob
c++/include/objects/trackmgr/blast_client.hpp [new file with mode: 0644] blob
c++/include/objects/trackmgr/createremotetrack_client.hpp [new file with mode: 0644] blob
c++/include/objects/trackmgr/createtrackset_client.hpp [new file with mode: 0644] blob
c++/include/objects/trackmgr/createusertrack_client.hpp [new file with mode: 0644] blob
c++/include/objects/trackmgr/displaytrack_client.hpp [new file with mode: 0644] blob
c++/include/objects/trackmgr/gridrpcclient.hpp [new file with mode: 0644] blob
c++/include/objects/trackmgr/item_resolver_client.hpp [new file with mode: 0644] blob
c++/include/objects/trackmgr/primary_snp.hpp [new file with mode: 0644] blob
c++/include/objects/trackmgr/removeusertrack_client.hpp [new file with mode: 0644] blob
c++/include/objects/trackmgr/supported_assemblies_client.hpp [new file with mode: 0644] blob
c++/include/objects/trackmgr/switch_context_client.hpp [new file with mode: 0644] blob
c++/include/objects/trackmgr/track_attrvalue_client.hpp [new file with mode: 0644] blob
c++/include/objects/trackmgr/trackmgr_client.hpp [new file with mode: 0644] blob
c++/include/objects/trackmgr/trackmgr_export.h [new file with mode: 0644] blob
c++/include/objects/trackmgr/trackset_client.hpp [new file with mode: 0644] blob
c++/include/objects/valerr/ValidErrItem.hpp [new file with mode: 0644] blob
c++/include/objects/valerr/ValidError.hpp [new file with mode: 0644] blob
c++/include/objects/valid/Comment_rule.hpp [new file with mode: 0644] blob
c++/include/objects/valid/Comment_set.hpp [new file with mode: 0644] blob
c++/include/objects/valid/Dependent_field_rule.hpp [new file with mode: 0644] blob
c++/include/objects/valid/Field_rule.hpp [new file with mode: 0644] blob
c++/include/objects/variation/Variation.hpp [new file with mode: 0644] blob
c++/include/objects/varrep/AaInterval.hpp [new file with mode: 0644] blob
c++/include/objects/varrep/AaLocation.hpp [new file with mode: 0644] blob
c++/include/objmgr/align_ci.hpp [new file with mode: 0644] blob
c++/include/objmgr/annot_ci.hpp [new file with mode: 0644] blob
c++/include/objmgr/annot_name.hpp [new file with mode: 0644] blob
c++/include/objmgr/annot_selector.hpp [new file with mode: 0644] blob
c++/include/objmgr/annot_type_selector.hpp [new file with mode: 0644] blob
c++/include/objmgr/annot_types_ci.hpp [new file with mode: 0644] blob
c++/include/objmgr/bio_object_id.hpp [new file with mode: 0644] blob
c++/include/objmgr/bioseq_ci.hpp [new file with mode: 0644] blob
c++/include/objmgr/bioseq_handle.hpp [new file with mode: 0644] blob
c++/include/objmgr/bioseq_set_handle.hpp [new file with mode: 0644] blob
c++/include/objmgr/blob_id.hpp [new file with mode: 0644] blob
c++/include/objmgr/data_loader.hpp [new file with mode: 0644] blob
c++/include/objmgr/data_loader_factory.hpp [new file with mode: 0644] blob
c++/include/objmgr/edit_saver.hpp [new file with mode: 0644] blob
c++/include/objmgr/edits_db_engine.hpp [new file with mode: 0644] blob
c++/include/objmgr/edits_db_saver.hpp [new file with mode: 0644] blob
c++/include/objmgr/error_codes.hpp [new file with mode: 0644] blob
c++/include/objmgr/feat_ci.hpp [new file with mode: 0644] blob
c++/include/objmgr/gc_assembly_parser.hpp [new file with mode: 0644] blob
c++/include/objmgr/graph_ci.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/annot_collector.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/annot_finder.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/annot_object.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/annot_object_index.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/annot_type_index.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/bioseq_base_info.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/bioseq_edit_commands.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/bioseq_info.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/bioseq_set_edit_commands.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/bioseq_set_info.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/data_source.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/edit_commands_impl.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/handle_range.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/handle_range_map.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/heap_scope.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/mutex_pool.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/prefetch_impl.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/prefetch_manager_impl.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/priority.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/scope_impl.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/scope_info.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/scope_transaction_impl.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/seq_align_mapper.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/seq_annot_edit_commands.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/seq_annot_info.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/seq_entry_edit_commands.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/seq_entry_info.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/seq_id_sort.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/seq_loc_cvt.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/seq_table_info.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/seq_table_setter.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/seq_table_setters.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/seq_vector_cvt.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/seq_vector_cvt_gcc_i386.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/seq_vector_cvt_gen.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/snp_annot_info.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/snp_info.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/split_parser.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/synonyms.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/tse_assigner.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/tse_chunk_info.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/tse_info.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/tse_info_object.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/tse_loadlock.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/tse_lock.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/tse_scope_lock.hpp [new file with mode: 0644] blob
c++/include/objmgr/impl/tse_split_info.hpp [new file with mode: 0644] blob
c++/include/objmgr/mapped_feat.hpp [new file with mode: 0644] blob
c++/include/objmgr/object_manager.hpp [new file with mode: 0644] blob
c++/include/objmgr/objmgr_exception.hpp [new file with mode: 0644] blob
c++/include/objmgr/objmgr_version.hpp [new file with mode: 0644] blob
c++/include/objmgr/prefetch.hpp [new file with mode: 0644] blob
c++/include/objmgr/prefetch_actions.hpp [new file with mode: 0644] blob
c++/include/objmgr/prefetch_manager.hpp [new file with mode: 0644] blob
c++/include/objmgr/scope.hpp [new file with mode: 0644] blob
c++/include/objmgr/scope_transaction.hpp [new file with mode: 0644] blob
c++/include/objmgr/seq_align_handle.hpp [new file with mode: 0644] blob
c++/include/objmgr/seq_annot_ci.hpp [new file with mode: 0644] blob
c++/include/objmgr/seq_annot_handle.hpp [new file with mode: 0644] blob
c++/include/objmgr/seq_descr_ci.hpp [new file with mode: 0644] blob
c++/include/objmgr/seq_entry_ci.hpp [new file with mode: 0644] blob
c++/include/objmgr/seq_entry_handle.hpp [new file with mode: 0644] blob
c++/include/objmgr/seq_feat_handle.hpp [new file with mode: 0644] blob
c++/include/objmgr/seq_graph_handle.hpp [new file with mode: 0644] blob
c++/include/objmgr/seq_loc_mapper.hpp [new file with mode: 0644] blob
c++/include/objmgr/seq_map.hpp [new file with mode: 0644] blob
c++/include/objmgr/seq_map_ci.hpp [new file with mode: 0644] blob
c++/include/objmgr/seq_map_switch.hpp [new file with mode: 0644] blob
c++/include/objmgr/seq_table_ci.hpp [new file with mode: 0644] blob
c++/include/objmgr/seq_vector.hpp [new file with mode: 0644] blob
c++/include/objmgr/seq_vector_ci.hpp [new file with mode: 0644] blob
c++/include/objmgr/seqdesc_ci.hpp [new file with mode: 0644] blob
c++/include/objmgr/split/annot_piece.hpp [new file with mode: 0644] blob
c++/include/objmgr/split/asn_sizer.hpp [new file with mode: 0644] blob
c++/include/objmgr/split/blob_splitter.hpp [new file with mode: 0644] blob
c++/include/objmgr/split/blob_splitter_impl.hpp [new file with mode: 0644] blob
c++/include/objmgr/split/blob_splitter_params.hpp [new file with mode: 0644] blob
c++/include/objmgr/split/chunk_info.hpp [new file with mode: 0644] blob
c++/include/objmgr/split/id2_compress.hpp [new file with mode: 0644] blob
c++/include/objmgr/split/id_range.hpp [new file with mode: 0644] blob
c++/include/objmgr/split/object_splitinfo.hpp [new file with mode: 0644] blob
c++/include/objmgr/split/place_id.hpp [new file with mode: 0644] blob
c++/include/objmgr/split/size.hpp [new file with mode: 0644] blob
c++/include/objmgr/split/split_blob.hpp [new file with mode: 0644] blob
c++/include/objmgr/split/split_exceptions.hpp [new file with mode: 0644] blob
c++/include/objmgr/table_field.hpp [new file with mode: 0644] blob
c++/include/objmgr/tse_handle.hpp [new file with mode: 0644] blob
c++/include/objmgr/unsupp_editsaver.hpp [new file with mode: 0644] blob
c++/include/objmgr/util/autodef.hpp [new file with mode: 0644] blob
c++/include/objmgr/util/autodef_available_modifier.hpp [new file with mode: 0644] blob
c++/include/objmgr/util/autodef_feature_clause.hpp [new file with mode: 0644] blob
c++/include/objmgr/util/autodef_feature_clause_base.hpp [new file with mode: 0644] blob
c++/include/objmgr/util/autodef_mod_combo.hpp [new file with mode: 0644] blob
c++/include/objmgr/util/autodef_options.hpp [new file with mode: 0644] blob
c++/include/objmgr/util/autodef_source_desc.hpp [new file with mode: 0644] blob
c++/include/objmgr/util/autodef_source_group.hpp [new file with mode: 0644] blob
c++/include/objmgr/util/create_defline.hpp [new file with mode: 0644] blob
c++/include/objmgr/util/feature.hpp [new file with mode: 0644] blob
c++/include/objmgr/util/feature_edit.hpp [new file with mode: 0644] blob
c++/include/objmgr/util/indexer.hpp [new file with mode: 0644] blob
c++/include/objmgr/util/obj_sniff.hpp [new file with mode: 0644] blob
c++/include/objmgr/util/objutil.hpp [new file with mode: 0644] blob
c++/include/objmgr/util/seq_align_util.hpp [new file with mode: 0644] blob
c++/include/objmgr/util/seq_loc_util.hpp [new file with mode: 0644] blob
c++/include/objmgr/util/sequence.hpp [new file with mode: 0644] blob
c++/include/objmgr/util/weight.hpp [new file with mode: 0644] blob
c++/include/objtools/align_format/align_format_util.hpp [new file with mode: 0644] blob
c++/include/objtools/align_format/aln_printer.hpp [new file with mode: 0644] blob
c++/include/objtools/align_format/format_flags.hpp [new file with mode: 0644] blob
c++/include/objtools/align_format/ilinkoutdb.hpp [new file with mode: 0644] blob
c++/include/objtools/align_format/seqalignfilter.hpp [new file with mode: 0644] blob
c++/include/objtools/align_format/showalign.hpp [new file with mode: 0644] blob
c++/include/objtools/align_format/showdefline.hpp [new file with mode: 0644] blob
c++/include/objtools/align_format/tabular.hpp [new file with mode: 0644] blob
c++/include/objtools/align_format/taxFormat.hpp [new file with mode: 0644] blob
c++/include/objtools/align_format/vectorscreen.hpp [new file with mode: 0644] blob
c++/include/objtools/alnmgr/aln_asn_reader.hpp [new file with mode: 0644] blob
c++/include/objtools/alnmgr/aln_builders.hpp [new file with mode: 0644] blob
c++/include/objtools/alnmgr/aln_container.hpp [new file with mode: 0644] blob
c++/include/objtools/alnmgr/aln_converters.hpp [new file with mode: 0644] blob
c++/include/objtools/alnmgr/aln_explorer.hpp [new file with mode: 0644] blob
c++/include/objtools/alnmgr/aln_generators.hpp [new file with mode: 0644] blob
c++/include/objtools/alnmgr/aln_rng_coll_list_oper.hpp [new file with mode: 0644] blob
c++/include/objtools/alnmgr/aln_rng_coll_oper.hpp [new file with mode: 0644] blob
c++/include/objtools/alnmgr/aln_seqid.hpp [new file with mode: 0644] blob
c++/include/objtools/alnmgr/aln_serial.hpp [new file with mode: 0644] blob
c++/include/objtools/alnmgr/aln_stats.hpp [new file with mode: 0644] blob
c++/include/objtools/alnmgr/aln_tests.hpp [new file with mode: 0644] blob
c++/include/objtools/alnmgr/aln_user_options.hpp [new file with mode: 0644] blob
c++/include/objtools/alnmgr/alndiag.hpp [new file with mode: 0644] blob
c++/include/objtools/alnmgr/alnexception.hpp [new file with mode: 0644] blob
c++/include/objtools/alnmgr/alnmap.hpp [new file with mode: 0644] blob
c++/include/objtools/alnmgr/alnmatch.hpp [new file with mode: 0644] blob
c++/include/objtools/alnmgr/alnmerger.hpp [new file with mode: 0644] blob
c++/include/objtools/alnmgr/alnmix.hpp [new file with mode: 0644] blob
c++/include/objtools/alnmgr/alnpos_ci.hpp [new file with mode: 0644] blob
c++/include/objtools/alnmgr/alnsegments.hpp [new file with mode: 0644] blob
c++/include/objtools/alnmgr/alnseq.hpp [new file with mode: 0644] blob
c++/include/objtools/alnmgr/alntext.hpp [new file with mode: 0644] blob
c++/include/objtools/alnmgr/alnvec.hpp [new file with mode: 0644] blob
c++/include/objtools/alnmgr/alnvec_iterator.hpp [new file with mode: 0644] blob
c++/include/objtools/alnmgr/pairwise_aln.hpp [new file with mode: 0644] blob
c++/include/objtools/alnmgr/score_builder_base.hpp [new file with mode: 0644] blob
c++/include/objtools/alnmgr/seqid_comp.hpp [new file with mode: 0644] blob
c++/include/objtools/alnmgr/seqids_extractor.hpp [new file with mode: 0644] blob
c++/include/objtools/alnmgr/sparse_aln.hpp [new file with mode: 0644] blob
c++/include/objtools/alnmgr/sparse_ci.hpp [new file with mode: 0644] blob
c++/include/objtools/alnmgr/task_progress.hpp [new file with mode: 0644] blob
c++/include/objtools/blast/blastdb_format/blastdb_dataextract.hpp [new file with mode: 0644] blob
c++/include/objtools/blast/blastdb_format/blastdb_formatter.hpp [new file with mode: 0644] blob
c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp [new file with mode: 0644] blob
c++/include/objtools/blast/blastdb_format/invalid_data_exception.hpp [new file with mode: 0644] blob
c++/include/objtools/blast/blastdb_format/seq_formatter.hpp [new file with mode: 0644] blob
c++/include/objtools/blast/blastdb_format/seq_writer.hpp [new file with mode: 0644] blob
c++/include/objtools/blast/gene_info_reader/file_utils.hpp [new file with mode: 0644] blob
c++/include/objtools/blast/gene_info_reader/gene_info.hpp [new file with mode: 0644] blob
c++/include/objtools/blast/gene_info_reader/gene_info_reader.hpp [new file with mode: 0644] blob
c++/include/objtools/blast/seqdb_reader/column_reader.hpp [new file with mode: 0644] blob
c++/include/objtools/blast/seqdb_reader/impl/lmdb++.h [new file with mode: 0644] blob
c++/include/objtools/blast/seqdb_reader/impl/seqdb_lmdb.hpp [new file with mode: 0644] blob
c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp [new file with mode: 0644] blob
c++/include/objtools/blast/seqdb_reader/impl/seqdbcol.hpp [new file with mode: 0644] blob
c++/include/objtools/blast/seqdb_reader/impl/seqdbfile.hpp [new file with mode: 0644] blob
c++/include/objtools/blast/seqdb_reader/impl/seqdbgeneral.hpp [new file with mode: 0644] blob
c++/include/objtools/blast/seqdb_reader/impl/seqdbisam.hpp [new file with mode: 0644] blob
c++/include/objtools/blast/seqdb_reader/impl/seqdbtax.hpp [new file with mode: 0644] blob
c++/include/objtools/blast/seqdb_reader/impl/seqdbvol.hpp [new file with mode: 0644] blob
c++/include/objtools/blast/seqdb_reader/seqdb.hpp [new file with mode: 0644] blob
c++/include/objtools/blast/seqdb_reader/seqdbblob.hpp [new file with mode: 0644] blob
c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp [new file with mode: 0644] blob
c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp [new file with mode: 0644] blob
c++/include/objtools/blast/seqdb_reader/seqidlist_reader.hpp [new file with mode: 0644] blob
c++/include/objtools/blast/seqdb_writer/build_db.hpp [new file with mode: 0644] blob
c++/include/objtools/blast/seqdb_writer/impl/criteria.hpp [new file with mode: 0644] blob
c++/include/objtools/blast/seqdb_writer/multisource_util.hpp [new file with mode: 0644] blob
c++/include/objtools/blast/seqdb_writer/seqidlist_writer.hpp [new file with mode: 0644] blob
c++/include/objtools/blast/seqdb_writer/taxid_set.hpp [new file with mode: 0644] blob
c++/include/objtools/blast/seqdb_writer/writedb.hpp [new file with mode: 0644] blob
c++/include/objtools/blast/seqdb_writer/writedb_convert.hpp [new file with mode: 0644] blob
c++/include/objtools/blast/seqdb_writer/writedb_error.hpp [new file with mode: 0644] blob
c++/include/objtools/blast/seqdb_writer/writedb_files.hpp [new file with mode: 0644] blob
c++/include/objtools/blast/seqdb_writer/writedb_general.hpp [new file with mode: 0644] blob
c++/include/objtools/blast/seqdb_writer/writedb_isam.hpp [new file with mode: 0644] blob
c++/include/objtools/blast/seqdb_writer/writedb_lmdb.hpp [new file with mode: 0644] blob
c++/include/objtools/blast/services/blast_services.hpp [new file with mode: 0644] blob
c++/include/objtools/cleanup/autogenerated_cleanup.hpp [new file with mode: 0755] blob
c++/include/objtools/cleanup/capitalization_string.hpp [new file with mode: 0644] blob
c++/include/objtools/cleanup/cleanup.hpp [new file with mode: 0644] blob
c++/include/objtools/cleanup/cleanup_change.hpp [new file with mode: 0644] blob
c++/include/objtools/cleanup/cleanup_message.hpp [new file with mode: 0644] blob
c++/include/objtools/cleanup/cleanup_pub.hpp [new file with mode: 0644] blob
c++/include/objtools/cleanup/fix_feature_id.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/blastdb/bdbloader.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/blastdb/bdbloader_rmt.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/blastdb/blastdb_adapter.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/blob_id.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/cache/reader_cache.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/cache/reader_cache_entry.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/cache/reader_cache_params.h [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/cache/writer_cache.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/cache/writer_cache_entry.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/gbloader.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/gbloader_params.h [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/gbnative.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/gicache/reader_gicache.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/gicache/reader_gicache_entry.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/gicache/reader_gicache_params.h [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/id1/reader_id1.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/id1/reader_id1_entry.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/id1/reader_id1_params.h [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/id2/reader_id2.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/id2/reader_id2_entry.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/id2/reader_id2_params.h [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/impl/cache_manager.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/impl/dispatcher.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/impl/gbload_util.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/impl/incr_time.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/impl/info_cache.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/impl/processor.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/impl/processors.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/impl/psg_loader_impl.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/impl/reader_id1_base.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/impl/reader_id2_base.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/impl/reader_service.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/impl/request_result.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/impl/standalone_result.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/impl/statistics.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/impl/wgsmaster.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/psg_loader.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/reader.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/reader_interface.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/reader_params.h [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/reader_service_params.h [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/reader_snp.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/readers.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/readers/cache/reader_cache.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/readers/cache/writer_cache.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/readers/id1/reader_id1.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/readers/id2/reader_id2.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/readers/pubseqos/reader_pubseq.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/readers/pubseqos2/reader_pubseq2.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/seqref.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/writer.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/genbank/writer_interface.hpp [new file with mode: 0644] blob
c++/include/objtools/data_loaders/loaders.hpp [new file with mode: 0644] blob
c++/include/objtools/edit/apply_object.hpp [new file with mode: 0644] blob
c++/include/objtools/edit/autodef.hpp [new file with mode: 0644] blob
c++/include/objtools/edit/autodef_options.hpp [new file with mode: 0644] blob
c++/include/objtools/edit/autodef_source_desc.hpp [new file with mode: 0644] blob
c++/include/objtools/edit/autodef_with_tax.hpp [new file with mode: 0644] blob
c++/include/objtools/edit/capitalization_string.hpp [new file with mode: 0644] blob
c++/include/objtools/edit/cds_fix.hpp [new file with mode: 0644] blob
c++/include/objtools/edit/dblink_field.hpp [new file with mode: 0644] blob
c++/include/objtools/edit/edit_error.hpp [new file with mode: 0644] blob
c++/include/objtools/edit/edit_exception.hpp [new file with mode: 0644] blob
c++/include/objtools/edit/external_annots.hpp [new file with mode: 0644] blob
c++/include/objtools/edit/feattable_edit.hpp [new file with mode: 0644] blob
c++/include/objtools/edit/feature_propagate.hpp [new file with mode: 0644] blob
c++/include/objtools/edit/field_handler.hpp [new file with mode: 0644] blob
c++/include/objtools/edit/gap_trim.hpp [new file with mode: 0644] blob
c++/include/objtools/edit/gaps_edit.hpp [new file with mode: 0644] blob
c++/include/objtools/edit/gb_block_field.hpp [new file with mode: 0644] blob
c++/include/objtools/edit/gene_utils.hpp [new file with mode: 0644] blob
c++/include/objtools/edit/link_cds_mrna.hpp [new file with mode: 0755] blob
c++/include/objtools/edit/loc_edit.hpp [new file with mode: 0644] blob
c++/include/objtools/edit/mail_report.hpp [new file with mode: 0644] blob
c++/include/objtools/edit/parse_text_options.hpp [new file with mode: 0644] blob
c++/include/objtools/edit/promote.hpp [new file with mode: 0644] blob
c++/include/objtools/edit/pub_fix.hpp [new file with mode: 0644] blob
c++/include/objtools/edit/publication_edit.hpp [new file with mode: 0644] blob
c++/include/objtools/edit/remote_updater.hpp [new file with mode: 0755] blob
c++/include/objtools/edit/rna_edit.hpp [new file with mode: 0644] blob
c++/include/objtools/edit/seq_edit.hpp [new file with mode: 0644] blob
c++/include/objtools/edit/seq_entry_edit.hpp [new file with mode: 0644] blob
c++/include/objtools/edit/seqid_guesser.hpp [new file with mode: 0644] blob
c++/include/objtools/edit/source_edit.hpp [new file with mode: 0644] blob
c++/include/objtools/edit/string_constraint.hpp [new file with mode: 0644] blob
c++/include/objtools/edit/struc_comm_field.hpp [new file with mode: 0644] blob
c++/include/objtools/edit/text_desc_field.hpp [new file with mode: 0644] blob
c++/include/objtools/edit/text_object_description.hpp [new file with mode: 0644] blob
c++/include/objtools/error_codes.hpp [new file with mode: 0644] blob
c++/include/objtools/eutils/api/efetch.hpp [new file with mode: 0644] blob
c++/include/objtools/eutils/api/egquery.hpp [new file with mode: 0644] blob
c++/include/objtools/eutils/api/ehistory.hpp [new file with mode: 0644] blob
c++/include/objtools/eutils/api/einfo.hpp [new file with mode: 0644] blob
c++/include/objtools/eutils/api/elink.hpp [new file with mode: 0644] blob
c++/include/objtools/eutils/api/epost.hpp [new file with mode: 0644] blob
c++/include/objtools/eutils/api/esearch.hpp [new file with mode: 0644] blob
c++/include/objtools/eutils/api/espell.hpp [new file with mode: 0644] blob
c++/include/objtools/eutils/api/esummary.hpp [new file with mode: 0644] blob
c++/include/objtools/eutils/api/eutils.hpp [new file with mode: 0644] blob
c++/include/objtools/eutils/esummary/DocSum.hpp [new file with mode: 0644] blob
c++/include/objtools/eutils/esummary/Item.hpp [new file with mode: 0644] blob
c++/include/objtools/format/cigar_formatter.hpp [new file with mode: 0644] blob
c++/include/objtools/format/context.hpp [new file with mode: 0644] blob
c++/include/objtools/format/embl_formatter.hpp [new file with mode: 0644] blob
c++/include/objtools/format/embl_gather.hpp [new file with mode: 0644] blob
c++/include/objtools/format/feature_gather.hpp [new file with mode: 0644] blob
c++/include/objtools/format/flat_expt.hpp [new file with mode: 0644] blob
c++/include/objtools/format/flat_file_config.hpp [new file with mode: 0644] blob
c++/include/objtools/format/flat_file_generator.hpp [new file with mode: 0644] blob
c++/include/objtools/format/format_item_ostream.hpp [new file with mode: 0644] blob
c++/include/objtools/format/formatter.hpp [new file with mode: 0644] blob
c++/include/objtools/format/ftable_formatter.hpp [new file with mode: 0644] blob
c++/include/objtools/format/ftable_gather.hpp [new file with mode: 0644] blob
c++/include/objtools/format/gather_items.hpp [new file with mode: 0644] blob
c++/include/objtools/format/gather_iter.hpp [new file with mode: 0644] blob
c++/include/objtools/format/gbseq_formatter.hpp [new file with mode: 0644] blob
c++/include/objtools/format/genbank_formatter.hpp [new file with mode: 0644] blob
c++/include/objtools/format/genbank_gather.hpp [new file with mode: 0644] blob
c++/include/objtools/format/item_formatter.hpp [new file with mode: 0644] blob
c++/include/objtools/format/item_ostream.hpp [new file with mode: 0644] blob
c++/include/objtools/format/items/accession_item.hpp [new file with mode: 0644] blob
c++/include/objtools/format/items/alignment_item.hpp [new file with mode: 0644] blob
c++/include/objtools/format/items/basecount_item.hpp [new file with mode: 0644] blob
c++/include/objtools/format/items/comment_item.hpp [new file with mode: 0644] blob
c++/include/objtools/format/items/contig_item.hpp [new file with mode: 0644] blob
c++/include/objtools/format/items/ctrl_items.hpp [new file with mode: 0644] blob
c++/include/objtools/format/items/date_item.hpp [new file with mode: 0644] blob
c++/include/objtools/format/items/dbsource_item.hpp [new file with mode: 0644] blob
c++/include/objtools/format/items/defline_item.hpp [new file with mode: 0644] blob
c++/include/objtools/format/items/feature_item.hpp [new file with mode: 0644] blob
c++/include/objtools/format/items/flat_qual_slots.hpp [new file with mode: 0644] blob
c++/include/objtools/format/items/flat_seqloc.hpp [new file with mode: 0644] blob
c++/include/objtools/format/items/gap_item.hpp [new file with mode: 0644] blob
c++/include/objtools/format/items/gene_finder.hpp [new file with mode: 0644] blob
c++/include/objtools/format/items/genome_item.hpp [new file with mode: 0644] blob
c++/include/objtools/format/items/genome_project_item.hpp [new file with mode: 0644] blob
c++/include/objtools/format/items/html_anchor_item.hpp [new file with mode: 0644] blob
c++/include/objtools/format/items/item.hpp [new file with mode: 0644] blob
c++/include/objtools/format/items/item_base.hpp [new file with mode: 0644] blob
c++/include/objtools/format/items/keywords_item.hpp [new file with mode: 0644] blob
c++/include/objtools/format/items/locus_item.hpp [new file with mode: 0644] blob
c++/include/objtools/format/items/origin_item.hpp [new file with mode: 0644] blob
c++/include/objtools/format/items/primary_item.hpp [new file with mode: 0644] blob
c++/include/objtools/format/items/qualifiers.hpp [new file with mode: 0644] blob
c++/include/objtools/format/items/reference_item.hpp [new file with mode: 0644] blob
c++/include/objtools/format/items/segment_item.hpp [new file with mode: 0644] blob
c++/include/objtools/format/items/sequence_item.hpp [new file with mode: 0644] blob
c++/include/objtools/format/items/source_item.hpp [new file with mode: 0644] blob
c++/include/objtools/format/items/tsa_item.hpp [new file with mode: 0644] blob
c++/include/objtools/format/items/version_item.hpp [new file with mode: 0644] blob
c++/include/objtools/format/items/wgs_item.hpp [new file with mode: 0644] blob
c++/include/objtools/format/ostream_text_ostream.hpp [new file with mode: 0644] blob
c++/include/objtools/format/sam_formatter.hpp [new file with mode: 0644] blob
c++/include/objtools/format/text_ostream.hpp [new file with mode: 0644] blob
c++/include/objtools/logging/listener.hpp [new file with mode: 0644] blob
c++/include/objtools/logging/message.hpp [new file with mode: 0644] blob
c++/include/objtools/pubseq_gateway/client/impl/misc.hpp [new file with mode: 0644] blob
c++/include/objtools/pubseq_gateway/client/psg_client.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/agp_converter.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/agp_read.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/agp_seq_entry.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/agp_util.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/agp_validate_reader.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/aln_error_reporter.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/aln_formats.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/aln_reader.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/alnread.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/bed_reader.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/cigar.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/error_container.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/fasta.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/fasta_exception.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/fasta_reader_utils.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/featuredump.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/format_guess_ex.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/getfeature.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/gff2_data.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/gff2_reader.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/gff3_reader.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/gff_base_columns.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/gff_reader.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/glimmer_reader.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/gtf_reader.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/gvf_reader.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/idmapper.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/iidmapper.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/line_error.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/message_listener.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/microarray_reader.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/mod_error.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/mod_reader.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/phrap.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/psl_reader.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/read_util.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/reader_base.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/reader_error_codes.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/reader_exception.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/reader_idgen.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/reader_listener.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/reader_message.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/readfeat.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/rm_reader.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/seqid_validate.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/source_mod_parser.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/source_mod_parser_wrapper.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/struct_cmt_reader.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/table_filter.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/track_data.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/ucscregion_reader.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/vcf_reader.hpp [new file with mode: 0644] blob
c++/include/objtools/readers/wiggle_reader.hpp [new file with mode: 0644] blob
c++/include/objtools/seqmasks_io/mask_bdb_reader.hpp [new file with mode: 0644] blob
c++/include/objtools/seqmasks_io/mask_cmdline_args.hpp [new file with mode: 0644] blob
c++/include/objtools/seqmasks_io/mask_fasta_reader.hpp [new file with mode: 0644] blob
c++/include/objtools/seqmasks_io/mask_reader.hpp [new file with mode: 0644] blob
c++/include/objtools/seqmasks_io/mask_writer.hpp [new file with mode: 0644] blob
c++/include/objtools/seqmasks_io/mask_writer_blastdb_maskinfo.hpp [new file with mode: 0644] blob
c++/include/objtools/seqmasks_io/mask_writer_fasta.hpp [new file with mode: 0644] blob
c++/include/objtools/seqmasks_io/mask_writer_int.hpp [new file with mode: 0644] blob
c++/include/objtools/seqmasks_io/mask_writer_seqloc.hpp [new file with mode: 0644] blob
c++/include/objtools/seqmasks_io/mask_writer_tab.hpp [new file with mode: 0644] blob
c++/include/objtools/simple/simple_om.hpp [new file with mode: 0644] blob
c++/include/serial/delaybuf.hpp [new file with mode: 0644] blob
c++/include/serial/enumvalues.hpp [new file with mode: 0644] blob
c++/include/serial/error_codes.hpp [new file with mode: 0644] blob
c++/include/serial/exception.hpp [new file with mode: 0644] blob
c++/include/serial/grpc_integration/grpc_integration.hpp [new file with mode: 0644] blob
c++/include/serial/grpc_integration/impl/grpc_support.hpp [new file with mode: 0644] blob
c++/include/serial/impl/aliasinfo.hpp [new file with mode: 0644] blob
c++/include/serial/impl/asntypes.hpp [new file with mode: 0644] blob
c++/include/serial/impl/autoptrinfo.hpp [new file with mode: 0644] blob
c++/include/serial/impl/choice.hpp [new file with mode: 0644] blob
c++/include/serial/impl/choice.inl [new file with mode: 0644] blob
c++/include/serial/impl/choiceptr.hpp [new file with mode: 0644] blob
c++/include/serial/impl/classinfo.hpp [new file with mode: 0644] blob
c++/include/serial/impl/classinfo.inl [new file with mode: 0644] blob
c++/include/serial/impl/classinfob.hpp [new file with mode: 0644] blob
c++/include/serial/impl/classinfob.inl [new file with mode: 0644] blob
c++/include/serial/impl/classinfohelper.hpp [new file with mode: 0644] blob
c++/include/serial/impl/continfo.hpp [new file with mode: 0644] blob
c++/include/serial/impl/continfo.inl [new file with mode: 0644] blob
c++/include/serial/impl/enumerated.hpp [new file with mode: 0644] blob
c++/include/serial/impl/hookdata.hpp [new file with mode: 0644] blob
c++/include/serial/impl/hookdatakey.hpp [new file with mode: 0644] blob
c++/include/serial/impl/hookfunc.hpp [new file with mode: 0644] blob
c++/include/serial/impl/item.hpp [new file with mode: 0644] blob
c++/include/serial/impl/item.inl [new file with mode: 0644] blob
c++/include/serial/impl/member.hpp [new file with mode: 0644] blob
c++/include/serial/impl/member.inl [new file with mode: 0644] blob
c++/include/serial/impl/memberid.hpp [new file with mode: 0644] blob
c++/include/serial/impl/memberid.inl [new file with mode: 0644] blob
c++/include/serial/impl/memberlist.hpp [new file with mode: 0644] blob
c++/include/serial/impl/memberlist.inl [new file with mode: 0644] blob
c++/include/serial/impl/objcopy.inl [new file with mode: 0644] blob
c++/include/serial/impl/objectinfo.inl [new file with mode: 0644] blob
c++/include/serial/impl/objectio.inl [new file with mode: 0644] blob
c++/include/serial/impl/objectiter.inl [new file with mode: 0644] blob
c++/include/serial/impl/objecttype.hpp [new file with mode: 0644] blob
c++/include/serial/impl/objistr.inl [new file with mode: 0644] blob
c++/include/serial/impl/objistrasnb.inl [new file with mode: 0644] blob
c++/include/serial/impl/objistrimpl.hpp [new file with mode: 0644] blob
c++/include/serial/impl/objistrxml.inl [new file with mode: 0644] blob
c++/include/serial/impl/objlist.hpp [new file with mode: 0644] blob
c++/include/serial/impl/objlist.inl [new file with mode: 0644] blob
c++/include/serial/impl/objostr.inl [new file with mode: 0644] blob
c++/include/serial/impl/objostrxml.inl [new file with mode: 0644] blob
c++/include/serial/impl/objstack.hpp [new file with mode: 0644] blob
c++/include/serial/impl/objstack.inl [new file with mode: 0644] blob
c++/include/serial/impl/objstrasnb.hpp [new file with mode: 0644] blob
c++/include/serial/impl/objstrasnb.inl [new file with mode: 0644] blob
c++/include/serial/impl/pathhook.hpp [new file with mode: 0644] blob
c++/include/serial/impl/ptrinfo.hpp [new file with mode: 0644] blob
c++/include/serial/impl/ptrinfo.inl [new file with mode: 0644] blob
c++/include/serial/impl/serialasndef.hpp [new file with mode: 0644] blob
c++/include/serial/impl/stdtypeinfo.hpp [new file with mode: 0644] blob
c++/include/serial/impl/stdtypes.hpp [new file with mode: 0644] blob
c++/include/serial/impl/stdtypes.inl [new file with mode: 0644] blob
c++/include/serial/impl/stdtypesimpl.hpp [new file with mode: 0644] blob
c++/include/serial/impl/stltypes.hpp [new file with mode: 0644] blob
c++/include/serial/impl/stltypesimpl.hpp [new file with mode: 0644] blob
c++/include/serial/impl/timetypeinfo.hpp [new file with mode: 0644] blob
c++/include/serial/impl/typeinfo.inl [new file with mode: 0644] blob
c++/include/serial/impl/typeinfoimpl.hpp [new file with mode: 0644] blob
c++/include/serial/impl/typemap.hpp [new file with mode: 0644] blob
c++/include/serial/impl/typemapimpl.hpp [new file with mode: 0644] blob
c++/include/serial/impl/typeref.hpp [new file with mode: 0644] blob
c++/include/serial/impl/typeref.inl [new file with mode: 0644] blob
c++/include/serial/impl/variant.hpp [new file with mode: 0644] blob
c++/include/serial/impl/variant.inl [new file with mode: 0644] blob
c++/include/serial/iterator.hpp [new file with mode: 0644] blob
c++/include/serial/objcopy.hpp [new file with mode: 0644] blob
c++/include/serial/objectinfo.hpp [new file with mode: 0644] blob
c++/include/serial/objectio.hpp [new file with mode: 0644] blob
c++/include/serial/objectiter.hpp [new file with mode: 0644] blob
c++/include/serial/objhook.hpp [new file with mode: 0644] blob
c++/include/serial/objistr.hpp [new file with mode: 0644] blob
c++/include/serial/objistrasn.hpp [new file with mode: 0644] blob
c++/include/serial/objistrasnb.hpp [new file with mode: 0644] blob
c++/include/serial/objistrjson.hpp [new file with mode: 0644] blob
c++/include/serial/objistrxml.hpp [new file with mode: 0644] blob
c++/include/serial/objostr.hpp [new file with mode: 0644] blob
c++/include/serial/objostrasn.hpp [new file with mode: 0644] blob
c++/include/serial/objostrasnb.hpp [new file with mode: 0644] blob
c++/include/serial/objostrjson.hpp [new file with mode: 0644] blob
c++/include/serial/objostrxml.hpp [new file with mode: 0644] blob
c++/include/serial/pack_string.hpp [new file with mode: 0644] blob
c++/include/serial/rpcbase.hpp [new file with mode: 0644] blob
c++/include/serial/rpcbase_impl.hpp [new file with mode: 0644] blob
c++/include/serial/serial.hpp [new file with mode: 0644] blob
c++/include/serial/serialasn.hpp [new file with mode: 0644] blob
c++/include/serial/serialbase.hpp [new file with mode: 0644] blob
c++/include/serial/serialdef.hpp [new file with mode: 0644] blob
c++/include/serial/serialimpl.hpp [new file with mode: 0644] blob
c++/include/serial/serializable.hpp [new file with mode: 0644] blob
c++/include/serial/serialutil.hpp [new file with mode: 0644] blob
c++/include/serial/streamiter.hpp [new file with mode: 0644] blob
c++/include/serial/typeinfo.hpp [new file with mode: 0644] blob
c++/include/util/align_range.hpp [new file with mode: 0644] blob
c++/include/util/align_range_coll.hpp [new file with mode: 0644] blob
c++/include/util/align_range_oper.hpp [new file with mode: 0644] blob
c++/include/util/arg_regexp.hpp [new file with mode: 0644] blob
c++/include/util/ascii85.hpp [new file with mode: 0644] blob
c++/include/util/bitset/bitset_debug.hpp [new file with mode: 0644] blob
c++/include/util/bitset/bitset_pool.hpp [new file with mode: 0644] blob
c++/include/util/bitset/bm.h [new file with mode: 0644] blob
c++/include/util/bitset/bm64.h [new file with mode: 0644] blob
c++/include/util/bitset/bmaggregator.h [new file with mode: 0644] blob
c++/include/util/bitset/bmalgo.h [new file with mode: 0644] blob
c++/include/util/bitset/bmalgo_impl.h [new file with mode: 0644] blob
c++/include/util/bitset/bmalgo_similarity.h [new file with mode: 0644] blob
c++/include/util/bitset/bmalloc.h [new file with mode: 0644] blob
c++/include/util/bitset/bmavx2.h [new file with mode: 0644] blob
c++/include/util/bitset/bmavx512.h [new file with mode: 0644] blob
c++/include/util/bitset/bmblocks.h [new file with mode: 0644] blob
c++/include/util/bitset/bmbmatrix.h [new file with mode: 0644] blob
c++/include/util/bitset/bmbmi1.h [new file with mode: 0644] blob
c++/include/util/bitset/bmbmi2.h [new file with mode: 0644] blob
c++/include/util/bitset/bmbuffer.h [new file with mode: 0644] blob
c++/include/util/bitset/bmconst.h [new file with mode: 0644] blob
c++/include/util/bitset/bmdbg.h [new file with mode: 0644] blob
c++/include/util/bitset/bmdef.h [new file with mode: 0644] blob
c++/include/util/bitset/bmfunc.h [new file with mode: 0644] blob
c++/include/util/bitset/bmfwd.h [new file with mode: 0644] blob
c++/include/util/bitset/bmgamma.h [new file with mode: 0644] blob
c++/include/util/bitset/bmintervals.h [new file with mode: 0644] blob
c++/include/util/bitset/bmrandom.h [new file with mode: 0644] blob
c++/include/util/bitset/bmrs.h [new file with mode: 0644] blob
c++/include/util/bitset/bmserial.h [new file with mode: 0644] blob
c++/include/util/bitset/bmsimd.h [new file with mode: 0644] blob
c++/include/util/bitset/bmsparsevec.h [new file with mode: 0644] blob
c++/include/util/bitset/bmsparsevec_algo.h [new file with mode: 0644] blob
c++/include/util/bitset/bmsparsevec_compr.h [new file with mode: 0644] blob
c++/include/util/bitset/bmsparsevec_parallel.h [new file with mode: 0644] blob
c++/include/util/bitset/bmsparsevec_serial.h [new file with mode: 0644] blob
c++/include/util/bitset/bmsparsevec_util.h [new file with mode: 0644] blob
c++/include/util/bitset/bmsse2.h [new file with mode: 0644] blob
c++/include/util/bitset/bmsse4.h [new file with mode: 0644] blob
c++/include/util/bitset/bmsse_util.h [new file with mode: 0644] blob
c++/include/util/bitset/bmstrsparsevec.h [new file with mode: 0644] blob
c++/include/util/bitset/bmtask.h [new file with mode: 0644] blob
c++/include/util/bitset/bmthreadpool.h [new file with mode: 0644] blob
c++/include/util/bitset/bmtimer.h [new file with mode: 0644] blob
c++/include/util/bitset/bmtrans.h [new file with mode: 0644] blob
c++/include/util/bitset/bmundef.h [new file with mode: 0644] blob
c++/include/util/bitset/bmutil.h [new file with mode: 0644] blob
c++/include/util/bitset/bmvmin.h [new file with mode: 0644] blob
c++/include/util/bitset/bmxor.h [new file with mode: 0644] blob
c++/include/util/bitset/encoding.h [new file with mode: 0644] blob
c++/include/util/bitset/license.txt [new file with mode: 0644] blob
c++/include/util/bitset/ncbi_bitset.hpp [new file with mode: 0644] blob
c++/include/util/bitset/ncbi_bitset_alloc.hpp [new file with mode: 0644] blob
c++/include/util/bitset/ncbi_bitset_util.hpp [new file with mode: 0644] blob
c++/include/util/bitset/readme [new file with mode: 0644] blob
c++/include/util/buffer_writer.hpp [new file with mode: 0644] blob
c++/include/util/bytesrc.hpp [new file with mode: 0644] blob
c++/include/util/cache/cache_async.hpp [new file with mode: 0644] blob
c++/include/util/cache/cache_ref.hpp [new file with mode: 0644] blob
c++/include/util/cache/icache.hpp [new file with mode: 0644] blob
c++/include/util/cache/icache_cf.hpp [new file with mode: 0644] blob
c++/include/util/cache/icache_clean_thread.hpp [new file with mode: 0644] blob
c++/include/util/checksum.hpp [new file with mode: 0644] blob
c++/include/util/compile_time.hpp [new file with mode: 0644] blob
c++/include/util/compress/archive.hpp [new file with mode: 0644] blob
c++/include/util/compress/archive_.hpp [new file with mode: 0644] blob
c++/include/util/compress/bzip2.hpp [new file with mode: 0644] blob
c++/include/util/compress/bzip2/bzlib.h [new file with mode: 0644] blob
c++/include/util/compress/compress.hpp [new file with mode: 0644] blob
c++/include/util/compress/lzo.hpp [new file with mode: 0644] blob
c++/include/util/compress/reader_zlib.hpp [new file with mode: 0644] blob
c++/include/util/compress/stream.hpp [new file with mode: 0644] blob
c++/include/util/compress/stream_util.hpp [new file with mode: 0644] blob
c++/include/util/compress/tar.hpp [new file with mode: 0644] blob
c++/include/util/compress/zlib.hpp [new file with mode: 0644] blob
c++/include/util/compress/zlib/zconf.h [new file with mode: 0644] blob
c++/include/util/compress/zlib/zlib.h [new file with mode: 0644] blob
c++/include/util/compress/zlib/zutil.h [new file with mode: 0644] blob
c++/include/util/creaders/alnread.h [new file with mode: 0644] blob
c++/include/util/creaders/creaders_export.h [new file with mode: 0644] blob
c++/include/util/data_histogram.hpp [new file with mode: 0644] blob
c++/include/util/ddump_viewer.hpp [new file with mode: 0644] blob
c++/include/util/dictionary.hpp [new file with mode: 0644] blob
c++/include/util/dictionary_util.hpp [new file with mode: 0644] blob
c++/include/util/distribution.hpp [new file with mode: 0644] blob
c++/include/util/error_codes.hpp [new file with mode: 0644] blob
c++/include/util/file_manifest.hpp [new file with mode: 0644] blob
c++/include/util/file_obsolete.hpp [new file with mode: 0644] blob
c++/include/util/floating_point.hpp [new file with mode: 0644] blob
c++/include/util/format_guess.hpp [new file with mode: 0644] blob
c++/include/util/histogram_binning.hpp [new file with mode: 0644] blob
c++/include/util/icanceled.hpp [new file with mode: 0644] blob
c++/include/util/id_mux.hpp [new file with mode: 0644] blob
c++/include/util/impl/compile_time_bits.hpp [new file with mode: 0644] blob
c++/include/util/impl/ct_crc32.hpp [new file with mode: 0644] blob
c++/include/util/impl/floating_point_comparison.hpp [new file with mode: 0644] blob
c++/include/util/itransaction.hpp [new file with mode: 0644] blob
c++/include/util/itree.hpp [new file with mode: 0644] blob
c++/include/util/itree.inl [new file with mode: 0644] blob
c++/include/util/lightstr.hpp [new file with mode: 0644] blob
c++/include/util/limited_size_map.hpp [new file with mode: 0644] blob
c++/include/util/line_reader.hpp [new file with mode: 0644] blob
c++/include/util/linkedset.hpp [new file with mode: 0644] blob
c++/include/util/lmdb/lmdb.h [new file with mode: 0644] blob
c++/include/util/lmdbxx/lmdb++.h [new file with mode: 0644] blob
c++/include/util/lock_vector.hpp [new file with mode: 0644] blob
c++/include/util/logrotate.hpp [new file with mode: 0644] blob
c++/include/util/mask_regexp.hpp [new file with mode: 0644] blob
c++/include/util/math/matrix.hpp [new file with mode: 0644] blob
c++/include/util/math/miscmath.h [new file with mode: 0644] blob
c++/include/util/math/promote.hpp [new file with mode: 0644] blob
c++/include/util/md5.hpp [new file with mode: 0644] blob
c++/include/util/miscmath.h [new file with mode: 0644] blob
c++/include/util/multi_writer.hpp [new file with mode: 0644] blob
c++/include/util/multipattern_search.hpp [new file with mode: 0644] blob
c++/include/util/mutex_pool.hpp [new file with mode: 0644] blob
c++/include/util/ncbi_cache.hpp [new file with mode: 0644] blob
c++/include/util/ncbi_table.hpp [new file with mode: 0644] blob
c++/include/util/ncbi_url.hpp [new file with mode: 0644] blob
c++/include/util/profile/rtprofile.hpp [new file with mode: 0644] blob
c++/include/util/random_gen.hpp [new file with mode: 0644] blob
c++/include/util/range.hpp [new file with mode: 0644] blob
c++/include/util/range_coll.hpp [new file with mode: 0644] blob
c++/include/util/range_set.hpp [new file with mode: 0644] blob
c++/include/util/rangelist.hpp [new file with mode: 0644] blob
c++/include/util/rangemap.hpp [new file with mode: 0644] blob
c++/include/util/rangemap.inl [new file with mode: 0644] blob
c++/include/util/reader_writer.hpp [new file with mode: 0644] blob
c++/include/util/regexp.hpp [new file with mode: 0644] blob
c++/include/util/regexp/pcre.h [new file with mode: 0644] blob
c++/include/util/regexp/pcrecpp.h [new file with mode: 0644] blob
c++/include/util/regexp/pcrecpparg.h [new file with mode: 0644] blob
c++/include/util/regexp/pcreposix.h [new file with mode: 0644] blob
c++/include/util/request_control.hpp [new file with mode: 0644] blob
c++/include/util/resize_iter.hpp [new file with mode: 0644] blob
c++/include/util/resource_pool.hpp [new file with mode: 0644] blob
c++/include/util/retry_ctx.hpp [new file with mode: 0644] blob
c++/include/util/row_reader.hpp [new file with mode: 0644] blob
c++/include/util/row_reader.inl [new file with mode: 0644] blob
c++/include/util/row_reader_base.hpp [new file with mode: 0644] blob
c++/include/util/row_reader_char_delimited.hpp [new file with mode: 0644] blob
c++/include/util/row_reader_excel_csv.hpp [new file with mode: 0644] blob
c++/include/util/row_reader_iana_csv.hpp [new file with mode: 0644] blob
c++/include/util/row_reader_iana_tsv.hpp [new file with mode: 0644] blob
c++/include/util/row_reader_ncbi_tsv.hpp [new file with mode: 0644] blob
c++/include/util/scheduler.hpp [new file with mode: 0644] blob
c++/include/util/sequtil/sequtil.hpp [new file with mode: 0644] blob
c++/include/util/sequtil/sequtil_convert.hpp [new file with mode: 0644] blob
c++/include/util/sequtil/sequtil_expt.hpp [new file with mode: 0644] blob
c++/include/util/sequtil/sequtil_manip.hpp [new file with mode: 0644] blob
c++/include/util/sgml_entity.hpp [new file with mode: 0644] blob
c++/include/util/simple_buffer.hpp [new file with mode: 0644] blob
c++/include/util/smalldns.hpp [new file with mode: 0644] blob
c++/include/util/static_map.hpp [new file with mode: 0644] blob
c++/include/util/static_set.hpp [new file with mode: 0644] blob
c++/include/util/strbuffer.hpp [new file with mode: 0644] blob
c++/include/util/strbuffer.inl [new file with mode: 0644] blob
c++/include/util/stream_source.hpp [new file with mode: 0644] blob
c++/include/util/strsearch.hpp [new file with mode: 0644] blob
c++/include/util/sync_queue.hpp [new file with mode: 0644] blob
c++/include/util/table_printer.hpp [new file with mode: 0644] blob
c++/include/util/tables/raw_scoremat.h [new file with mode: 0644] blob
c++/include/util/tables/tables_export.h [new file with mode: 0644] blob
c++/include/util/text_joiner.hpp [new file with mode: 0644] blob
c++/include/util/thread_nonstop.hpp [new file with mode: 0644] blob
c++/include/util/thread_pool.hpp [new file with mode: 0644] blob
c++/include/util/thread_pool_ctrl.hpp [new file with mode: 0644] blob
c++/include/util/thread_pool_old.hpp [new file with mode: 0644] blob
c++/include/util/time_line.hpp [new file with mode: 0644] blob
c++/include/util/timsort.hpp [new file with mode: 0644] blob
c++/include/util/transmissionrw.hpp [new file with mode: 0644] blob
c++/include/util/unicode.hpp [new file with mode: 0644] blob
c++/include/util/utf8.hpp [new file with mode: 0644] blob
c++/include/util/util_exception.hpp [new file with mode: 0644] blob
c++/include/util/util_misc.hpp [new file with mode: 0644] blob
c++/include/util/uttp.hpp [new file with mode: 0644] blob
c++/include/util/value_convert.hpp [new file with mode: 0644] blob
c++/include/util/value_convert_policy.hpp [new file with mode: 0644] blob
c++/include/util/weakmap.hpp [new file with mode: 0644] blob
c++/include/util/weakmap.inl [new file with mode: 0644] blob
c++/include/util/xregexp/arg_regexp.hpp [new file with mode: 0644] blob
c++/include/util/xregexp/convert_dates_iso8601.hpp [new file with mode: 0644] blob
c++/include/util/xregexp/mask_regexp.hpp [new file with mode: 0644] blob
c++/include/util/xregexp/regexp.hpp [new file with mode: 0644] blob
c++/include/util/xregexp/regexp_template_tester.hpp [new file with mode: 0644] blob
c++/scripts/common/add_vdb.sh [new file with mode: 0755] blob
c++/scripts/common/check/check_add.sh [new file with mode: 0755] blob
c++/scripts/common/check/check_exec.sh [new file with mode: 0755] blob
c++/scripts/common/check/check_exec_guard.sh [new file with mode: 0755] blob
c++/scripts/common/check/check_exec_test.sh [new file with mode: 0755] blob
c++/scripts/common/check/check_make_cfg.sh [new file with mode: 0755] blob
c++/scripts/common/check/check_make_unix.sh [new file with mode: 0755] blob
c++/scripts/common/check/check_make_unix_cmake.sh [new file with mode: 0755] blob
c++/scripts/common/check/check_make_win_cfg.sh [new file with mode: 0755] blob
c++/scripts/common/check/check_make_xcode_cfg.sh [new file with mode: 0755] blob
c++/scripts/common/check/check_run.sh [new file with mode: 0755] blob
c++/scripts/common/check/check_setup.cfg [new file with mode: 0644] blob
c++/scripts/common/check/inspxe-suppressions/_vs.sup [new file with mode: 0644] blob
c++/scripts/common/check/inspxe-suppressions/connect.sup [new file with mode: 0644] blob
c++/scripts/common/check/inspxe-suppressions/corelib.sup [new file with mode: 0644] blob
c++/scripts/common/check/inspxe-suppressions/dbapi.sup [new file with mode: 0644] blob
c++/scripts/common/check/inspxe-suppressions/misc.sup [new file with mode: 0644] blob
c++/scripts/common/check/inspxe-suppressions/serial.sup [new file with mode: 0644] blob
c++/scripts/common/check/inspxe-suppressions/util.sup [new file with mode: 0644] blob
c++/scripts/common/check/inspxe.sh [new file with mode: 0755] blob
c++/scripts/common/check/lsan.supp [new file with mode: 0644] blob
c++/scripts/common/check/tsan.supp [new file with mode: 0644] blob
c++/scripts/common/check/valgrind.supp [new file with mode: 0644] blob
c++/scripts/common/common.sh [new file with mode: 0755] blob
c++/scripts/common/impl/collect_outside_libs.sh [new file with mode: 0755] blob
c++/scripts/common/impl/compress_tests.sh [new file with mode: 0755] blob
c++/scripts/common/impl/create_flat_makefile.sh [new file with mode: 0755] blob
c++/scripts/common/impl/create_flat_submakefile.awk [new file with mode: 0644] blob
c++/scripts/common/impl/create_flat_submakefile.sh [new file with mode: 0755] blob
c++/scripts/common/impl/create_flat_tuneups.sh [new file with mode: 0755] blob
c++/scripts/common/impl/define_random_macros.sh [new file with mode: 0755] blob
c++/scripts/common/impl/favor-static [new file with mode: 0755] blob
c++/scripts/common/impl/generate_all_objects.sh [new file with mode: 0755] blob
c++/scripts/common/impl/get_lock.sh [new file with mode: 0755] blob
c++/scripts/common/impl/if_diff.sh [new file with mode: 0755] blob
c++/scripts/common/impl/if_none.sh [new file with mode: 0755] blob
c++/scripts/common/impl/install.sh [new file with mode: 0755] blob
c++/scripts/common/impl/is_log_interesting.awk [new file with mode: 0755] blob
c++/scripts/common/impl/ln_mac.sh [new file with mode: 0755] blob
c++/scripts/common/impl/make_lock_map.sh [new file with mode: 0755] blob
c++/scripts/common/impl/maybe_reconfigure.sh [new file with mode: 0755] blob
c++/scripts/common/impl/ncbicxx_build_info.py [new file with mode: 0644] blob
c++/scripts/common/impl/python-config.py [new file with mode: 0755] blob
c++/scripts/common/impl/reconfigure.sh [new file with mode: 0755] blob
c++/scripts/common/impl/report_duplicates.awk [new file with mode: 0755] blob
c++/scripts/common/impl/run_sybase_app.sh [new file with mode: 0755] blob
c++/scripts/common/impl/run_with_lock.sh [new file with mode: 0755] blob
c++/scripts/common/impl/strip_for_install.sh [new file with mode: 0755] blob
c++/scripts/common/impl/supplement_makefile_mk.sh [new file with mode: 0755] blob
c++/scripts/common/impl/update_configurable.sh [new file with mode: 0755] blob
c++/scripts/common/impl/yaml.py [new file with mode: 0644] blob
c++/scripts/common/new_cmake_project.bat [new file with mode: 0644] blob
c++/scripts/common/new_cmake_project.sh [new file with mode: 0755] blob
c++/scripts/common/new_project.sh [new file with mode: 0755] blob
c++/scripts/common/new_project.wsf [new file with mode: 0644] blob
c++/scripts/common/project_utilits.js [new file with mode: 0644] blob
c++/scripts/common/tweak_ncbiconf.sh [new file with mode: 0755] blob
c++/scripts/projects/blast/ChangeLog [new file with mode: 0644] blob
c++/scripts/projects/blast/LICENSE [new file with mode: 0644] blob
c++/scripts/projects/blast/Manifest [new file with mode: 0644] blob
c++/scripts/projects/blast/README [new file with mode: 0644] blob
c++/scripts/projects/blast/components.link [new file with mode: 0644] blob
c++/scripts/projects/blast/post_build/blast_utils.py [new file with mode: 0644] blob
c++/scripts/projects/blast/post_build/macosx/large-Blue_ncbi_logo.tiff [new file with mode: 0644] blob
c++/scripts/projects/blast/post_build/macosx/ncbi-blast.sh [new file with mode: 0755] blob
c++/scripts/projects/blast/post_build/macosx/uninstall_ncbi_blast.zip [new file with mode: 0644] blob
c++/scripts/projects/blast/post_build/macosx/welcome.txt [new file with mode: 0644] blob
c++/scripts/projects/blast/post_build/make_installers.py [new file with mode: 0755] blob
c++/scripts/projects/blast/post_build/rpm/make_rpm.py [new file with mode: 0755] blob
c++/scripts/projects/blast/post_build/rpm/ncbi-blast.spec [new file with mode: 0644] blob
c++/scripts/projects/blast/post_build/rpm/test.sh [new file with mode: 0755] blob
c++/scripts/projects/blast/post_build/win/EnvVarUpdate.nsh [new file with mode: 0644] blob
c++/scripts/projects/blast/post_build/win/make_win.py [new file with mode: 0644] blob
c++/scripts/projects/blast/post_build/win/ncbi-blast.nsi [new file with mode: 0755] blob
c++/scripts/projects/blast/post_build/win/ncbilogo.ico [new file with mode: 0644] blob
c++/scripts/projects/blast/project.lst [new file with mode: 0644] blob
c++/scripts/projects/blast_core_lib.lst [new file with mode: 0644] blob
c++/scripts/projects/clog.lst [new file with mode: 0644] blob
c++/scripts/projects/cn3d.lst [new file with mode: 0644] blob
c++/scripts/projects/cobalt/ChangeLog [new file with mode: 0644] blob
c++/scripts/projects/cobalt/LICENSE [new file with mode: 0644] blob
c++/scripts/projects/cobalt/Manifest [new file with mode: 0644] blob
c++/scripts/projects/cobalt/README [new file with mode: 0644] blob
c++/scripts/projects/cobalt/components.link [new file with mode: 0644] blob
c++/scripts/projects/cobalt/post_build/blast_utils.py [new file with mode: 0644] blob
c++/scripts/projects/cobalt/post_build/macosx/large-Blue_ncbi_logo.tiff [new file with mode: 0644] blob
c++/scripts/projects/cobalt/post_build/macosx/ncbi-cobalt.sh [new file with mode: 0755] blob
c++/scripts/projects/cobalt/post_build/macosx/uninstall_ncbi_cobalt.zip [new file with mode: 0644] blob
c++/scripts/projects/cobalt/post_build/macosx/welcome.txt [new file with mode: 0644] blob
c++/scripts/projects/cobalt/post_build/make_installers.py [new file with mode: 0755] blob
c++/scripts/projects/cobalt/post_build/rpm/make_rpm.py [new file with mode: 0755] blob
c++/scripts/projects/cobalt/post_build/rpm/ncbi-cobalt.spec [new file with mode: 0644] blob
c++/scripts/projects/cobalt/post_build/win/EnvVarUpdate.nsh [new file with mode: 0644] blob
c++/scripts/projects/cobalt/post_build/win/make_win.py [new file with mode: 0644] blob
c++/scripts/projects/cobalt/post_build/win/ncbi-cobalt.nsi [new file with mode: 0755] blob
c++/scripts/projects/cobalt/post_build/win/ncbilogo.ico [new file with mode: 0644] blob
c++/scripts/projects/cobalt/post_build/win/unix2dos.nsh [new file with mode: 0644] blob
c++/scripts/projects/cobalt/project.lst [new file with mode: 0644] blob
c++/scripts/projects/connect.lst [new file with mode: 0644] blob
c++/scripts/projects/corelib/ChangeLog [new file with mode: 0644] blob
c++/scripts/projects/corelib/LICENSE [new file with mode: 0644] blob
c++/scripts/projects/corelib/Manifest [new file with mode: 0644] blob
c++/scripts/projects/corelib/README [new file with mode: 0644] blob
c++/scripts/projects/corelib/project.lst [new file with mode: 0644] blob
c++/scripts/projects/datatool/ChangeLog [new file with mode: 0644] blob
c++/scripts/projects/datatool/LICENSE [new file with mode: 0644] blob
c++/scripts/projects/datatool/Manifest [new file with mode: 0644] blob
c++/scripts/projects/datatool/README [new file with mode: 0644] blob
c++/scripts/projects/datatool/components.link [new file with mode: 0644] blob
c++/scripts/projects/datatool/project.lst [new file with mode: 0644] blob
c++/scripts/projects/dbapi.lst [new file with mode: 0644] blob
c++/scripts/projects/dbsnp-2.0.lst [new file with mode: 0644] blob
c++/scripts/projects/dispatcher/ChangeLog [new file with mode: 0644] blob
c++/scripts/projects/dispatcher/LICENSE [new file with mode: 0644] blob
c++/scripts/projects/dispatcher/Manifest [new file with mode: 0644] blob
c++/scripts/projects/dispatcher/README [new file with mode: 0644] blob
c++/scripts/projects/dispatcher/project.lst [new file with mode: 0644] blob
c++/scripts/projects/freetds.lst [new file with mode: 0644] blob
c++/scripts/projects/fwdaemon/ChangeLog [new file with mode: 0644] blob
c++/scripts/projects/fwdaemon/LICENSE [new file with mode: 0644] blob
c++/scripts/projects/fwdaemon/Manifest [new file with mode: 0644] blob
c++/scripts/projects/fwdaemon/README [new file with mode: 0644] blob
c++/scripts/projects/fwdaemon/project.lst [new file with mode: 0644] blob
c++/scripts/projects/grid-dashboard/ChangeLog [new file with mode: 0644] blob
c++/scripts/projects/grid-dashboard/LICENSE [new file with mode: 0644] blob
c++/scripts/projects/grid-dashboard/Manifest [new file with mode: 0644] blob
c++/scripts/projects/grid-dashboard/README [new file with mode: 0644] blob
c++/scripts/projects/grid-dashboard/project.lst [new file with mode: 0644] blob
c++/scripts/projects/grid-dashboard/tagprecommit/create_version.py [new file with mode: 0755] blob
c++/scripts/projects/grid-python/ChangeLog [new file with mode: 0644] blob
c++/scripts/projects/grid-python/LICENSE [new file with mode: 0644] blob
c++/scripts/projects/grid-python/Manifest [new file with mode: 0644] blob
c++/scripts/projects/grid-python/README [new file with mode: 0644] blob
c++/scripts/projects/grid-python/project.lst [new file with mode: 0644] blob
c++/scripts/projects/grid-python/tagprecommit/update_version.py [new file with mode: 0755] blob
c++/scripts/projects/grid-test.lst [new file with mode: 0755] blob
c++/scripts/projects/gumbel_params/ChangeLog [new file with mode: 0644] blob
c++/scripts/projects/gumbel_params/LICENSE [new file with mode: 0644] blob
c++/scripts/projects/gumbel_params/Manifest [new file with mode: 0644] blob
c++/scripts/projects/gumbel_params/README [new file with mode: 0644] blob
c++/scripts/projects/gumbel_params/project.lst [new file with mode: 0644] blob
c++/scripts/projects/igblast/ChangeLog [new file with mode: 0644] blob
c++/scripts/projects/igblast/LICENSE [new file with mode: 0644] blob
c++/scripts/projects/igblast/Manifest [new file with mode: 0644] blob
c++/scripts/projects/igblast/README [new file with mode: 0644] blob
c++/scripts/projects/igblast/components.link [new file with mode: 0644] blob
c++/scripts/projects/igblast/edit_imgt_file.pl [new file with mode: 0755] blob
c++/scripts/projects/igblast/post_build/blast_utils.py [new file with mode: 0644] blob
c++/scripts/projects/igblast/post_build/macosx/large-Blue_ncbi_logo.tiff [new file with mode: 0644] blob
c++/scripts/projects/igblast/post_build/macosx/ncbi-igblast.sh [new file with mode: 0755] blob
c++/scripts/projects/igblast/post_build/macosx/uninstall_ncbi_igblast.zip [new file with mode: 0644] blob
c++/scripts/projects/igblast/post_build/macosx/welcome.txt [new file with mode: 0644] blob
c++/scripts/projects/igblast/post_build/make_installers.py [new file with mode: 0755] blob
c++/scripts/projects/igblast/post_build/rpm/make_rpm.py [new file with mode: 0755] blob
c++/scripts/projects/igblast/post_build/rpm/ncbi-igblast.spec [new file with mode: 0644] blob
c++/scripts/projects/igblast/post_build/win/EnvVarUpdate.nsh [new file with mode: 0644] blob
c++/scripts/projects/igblast/post_build/win/make_win.py [new file with mode: 0644] blob
c++/scripts/projects/igblast/post_build/win/ncbi-blast.nsi [new file with mode: 0755] blob
c++/scripts/projects/igblast/post_build/win/ncbilogo.ico [new file with mode: 0644] blob
c++/scripts/projects/igblast/post_build/win/unix2dos.nsh [new file with mode: 0644] blob
c++/scripts/projects/igblast/project.lst [new file with mode: 0644] blob
c++/scripts/projects/lbsbd/ChangeLog [new file with mode: 0644] blob
c++/scripts/projects/lbsbd/LICENSE [new file with mode: 0644] blob
c++/scripts/projects/lbsbd/Manifest [new file with mode: 0644] blob
c++/scripts/projects/lbsbd/README [new file with mode: 0644] blob
c++/scripts/projects/lbsbd/project.lst [new file with mode: 0644] blob
c++/scripts/projects/lds.lst [new file with mode: 0644] blob
c++/scripts/projects/magicblast/ChangeLog [new file with mode: 0644] blob
c++/scripts/projects/magicblast/LICENSE [new file with mode: 0644] blob
c++/scripts/projects/magicblast/Manifest [new file with mode: 0644] blob
c++/scripts/projects/magicblast/README [new file with mode: 0644] blob
c++/scripts/projects/magicblast/components.link [new file with mode: 0644] blob
c++/scripts/projects/magicblast/post_build/blast_utils.py [new file with mode: 0644] blob
c++/scripts/projects/magicblast/post_build/macosx/large-Blue_ncbi_logo.tiff [new file with mode: 0644] blob
c++/scripts/projects/magicblast/post_build/macosx/ncbi-magicblast.sh [new file with mode: 0755] blob
c++/scripts/projects/magicblast/post_build/macosx/uninstall_ncbi_magicblast.zip [new file with mode: 0644] blob
c++/scripts/projects/magicblast/post_build/macosx/welcome.txt [new file with mode: 0644] blob
c++/scripts/projects/magicblast/post_build/make_installers.py [new file with mode: 0755] blob
c++/scripts/projects/magicblast/post_build/rpm/make_rpm.py [new file with mode: 0755] blob
c++/scripts/projects/magicblast/post_build/rpm/ncbi-magicblast.spec [new file with mode: 0644] blob
c++/scripts/projects/magicblast/post_build/win/EnvVarUpdate.nsh [new file with mode: 0644] blob
c++/scripts/projects/magicblast/post_build/win/make_win.py [new file with mode: 0644] blob
c++/scripts/projects/magicblast/post_build/win/ncbi-blast.nsi [new file with mode: 0755] blob
c++/scripts/projects/magicblast/post_build/win/ncbilogo.ico [new file with mode: 0644] blob
c++/scripts/projects/magicblast/post_build/win/unix2dos.nsh [new file with mode: 0644] blob
c++/scripts/projects/magicblast/project.lst [new file with mode: 0644] blob
c++/scripts/projects/massspec.lst [new file with mode: 0644] blob
c++/scripts/projects/mod_caf/ChangeLog [new file with mode: 0644] blob
c++/scripts/projects/mod_caf/LICENSE [new file with mode: 0644] blob
c++/scripts/projects/mod_caf/Manifest [new file with mode: 0644] blob
c++/scripts/projects/mod_caf/README [new file with mode: 0644] blob
c++/scripts/projects/mod_caf/project.lst [new file with mode: 0644] blob
c++/scripts/projects/mod_loadinfo/ChangeLog [new file with mode: 0644] blob
c++/scripts/projects/mod_loadinfo/LICENSE [new file with mode: 0644] blob
c++/scripts/projects/mod_loadinfo/Manifest [new file with mode: 0644] blob
c++/scripts/projects/mod_loadinfo/README [new file with mode: 0644] blob
c++/scripts/projects/mod_loadinfo/project.lst [new file with mode: 0644] blob
c++/scripts/projects/ncbi_applog/ChangeLog [new file with mode: 0644] blob
c++/scripts/projects/ncbi_applog/LICENSE [new file with mode: 0644] blob
c++/scripts/projects/ncbi_applog/Manifest [new file with mode: 0644] blob
c++/scripts/projects/ncbi_applog/README [new file with mode: 0644] blob
c++/scripts/projects/ncbi_applog/project.lst [new file with mode: 0644] blob
c++/scripts/projects/ncbi_cpp.lst [new file with mode: 0644] blob
c++/scripts/projects/ncbi_cpp_dll.lst [new file with mode: 0644] blob
c++/scripts/projects/ncbi_gbench.lst [new file with mode: 0644] blob
c++/scripts/projects/ncbi_gui.lst [new file with mode: 0644] blob
c++/scripts/projects/ncbi_gui_base.lst [new file with mode: 0644] blob
c++/scripts/projects/ncbi_mapview.lst [new file with mode: 0644] blob
c++/scripts/projects/ncbi_panfs/ChangeLog [new file with mode: 0644] blob
c++/scripts/projects/ncbi_panfs/LICENSE [new file with mode: 0644] blob
c++/scripts/projects/ncbi_panfs/Manifest [new file with mode: 0644] blob
c++/scripts/projects/ncbi_panfs/README [new file with mode: 0644] blob
c++/scripts/projects/ncbi_panfs/project.lst [new file with mode: 0644] blob
c++/scripts/projects/ncbi_sviewer.lst [new file with mode: 0644] blob
c++/scripts/projects/ncbi_user.lst [new file with mode: 0644] blob
c++/scripts/projects/ncbi_wrap.lst [new file with mode: 0644] blob
c++/scripts/projects/netcache/ChangeLog [new file with mode: 0644] blob
c++/scripts/projects/netcache/LICENSE [new file with mode: 0644] blob
c++/scripts/projects/netcache/Manifest [new file with mode: 0644] blob
c++/scripts/projects/netcache/README [new file with mode: 0644] blob
c++/scripts/projects/netcache/components.link [new file with mode: 0644] blob
c++/scripts/projects/netcache/project.lst [new file with mode: 0755] blob
c++/scripts/projects/netschedule/ChangeLog [new file with mode: 0644] blob
c++/scripts/projects/netschedule/LICENSE [new file with mode: 0644] blob
c++/scripts/projects/netschedule/Manifest [new file with mode: 0644] blob
c++/scripts/projects/netschedule/README [new file with mode: 0644] blob
c++/scripts/projects/netschedule/components.link [new file with mode: 0644] blob
c++/scripts/projects/netschedule/project.lst [new file with mode: 0644] blob
c++/scripts/projects/netstorage/ChangeLog [new file with mode: 0644] blob
c++/scripts/projects/netstorage/LICENSE [new file with mode: 0644] blob
c++/scripts/projects/netstorage/Manifest [new file with mode: 0644] blob
c++/scripts/projects/netstorage/README [new file with mode: 0644] blob
c++/scripts/projects/netstorage/components.link [new file with mode: 0644] blob
c++/scripts/projects/netstorage/project.lst [new file with mode: 0644] blob
c++/scripts/projects/netstorage_gc/ChangeLog [new file with mode: 0644] blob
c++/scripts/projects/netstorage_gc/LICENSE [new file with mode: 0644] blob
c++/scripts/projects/netstorage_gc/Manifest [new file with mode: 0644] blob
c++/scripts/projects/netstorage_gc/README [new file with mode: 0644] blob
c++/scripts/projects/netstorage_gc/project.lst [new file with mode: 0644] blob
c++/scripts/projects/no_gbench.lst [new file with mode: 0644] blob
c++/scripts/projects/perl_diag/ChangeLog [new file with mode: 0644] blob
c++/scripts/projects/perl_diag/LICENSE [new file with mode: 0644] blob
c++/scripts/projects/perl_diag/Manifest [new file with mode: 0644] blob
c++/scripts/projects/perl_diag/README [new file with mode: 0644] blob
c++/scripts/projects/perl_diag/project.lst [new file with mode: 0644] blob
c++/scripts/projects/project_tree_builder/ChangeLog [new file with mode: 0644] blob
c++/scripts/projects/project_tree_builder/LICENSE [new file with mode: 0644] blob
c++/scripts/projects/project_tree_builder/Manifest [new file with mode: 0644] blob
c++/scripts/projects/project_tree_builder/README [new file with mode: 0644] blob
c++/scripts/projects/project_tree_builder/components.link [new file with mode: 0644] blob
c++/scripts/projects/project_tree_builder/project.lst [new file with mode: 0644] blob
c++/scripts/projects/psg_client/ChangeLog [new file with mode: 0644] blob
c++/scripts/projects/psg_client/LICENSE [new file with mode: 0644] blob
c++/scripts/projects/psg_client/Manifest [new file with mode: 0644] blob
c++/scripts/projects/psg_client/README [new file with mode: 0644] blob
c++/scripts/projects/psg_client/components.link [new file with mode: 0644] blob
c++/scripts/projects/psg_client/project.lst [new file with mode: 0644] blob
c++/scripts/projects/public/ChangeLog [new file with mode: 0644] blob
c++/scripts/projects/public/LICENSE [new file with mode: 0644] blob
c++/scripts/projects/public/Manifest [new file with mode: 0644] blob
c++/scripts/projects/public/README [new file with mode: 0644] blob
c++/scripts/projects/public/components.link [new file with mode: 0644] blob
c++/scripts/projects/public/project.lst [new file with mode: 0644] blob
c++/scripts/projects/public/tagprecommit/use_embedded_ptb.py [new file with mode: 0755] blob
c++/scripts/projects/pubseq_gateway/ChangeLog [new file with mode: 0644] blob
c++/scripts/projects/pubseq_gateway/LICENSE [new file with mode: 0644] blob
c++/scripts/projects/pubseq_gateway/Manifest [new file with mode: 0644] blob
c++/scripts/projects/pubseq_gateway/README [new file with mode: 0644] blob
c++/scripts/projects/pubseq_gateway/components.link [new file with mode: 0644] blob
c++/scripts/projects/pubseq_gateway/project.lst [new file with mode: 0644] blob
c++/scripts/projects/python_ncbi_dbapi/ChangeLog [new file with mode: 0644] blob
c++/scripts/projects/python_ncbi_dbapi/LICENSE [new file with mode: 0644] blob
c++/scripts/projects/python_ncbi_dbapi/Manifest [new file with mode: 0644] blob
c++/scripts/projects/python_ncbi_dbapi/README [new file with mode: 0644] blob
c++/scripts/projects/python_ncbi_dbapi/components.link [new file with mode: 0644] blob
c++/scripts/projects/python_ncbi_dbapi/post_build/post_build.py [new file with mode: 0755] blob
c++/scripts/projects/python_ncbi_dbapi/project.lst [new file with mode: 0644] blob
c++/scripts/projects/quickblastp/ChangeLog [new file with mode: 0644] blob
c++/scripts/projects/quickblastp/LICENSE [new file with mode: 0644] blob
c++/scripts/projects/quickblastp/Manifest [new file with mode: 0644] blob
c++/scripts/projects/quickblastp/README [new file with mode: 0644] blob
c++/scripts/projects/quickblastp/components.link [new file with mode: 0644] blob
c++/scripts/projects/quickblastp/post_build/blast_utils.py [new file with mode: 0644] blob
c++/scripts/projects/quickblastp/post_build/macosx/large-Blue_ncbi_logo.tiff [new file with mode: 0644] blob
c++/scripts/projects/quickblastp/post_build/macosx/ncbi-magicblast.sh [new file with mode: 0755] blob
c++/scripts/projects/quickblastp/post_build/macosx/uninstall_ncbi_magicblast.zip [new file with mode: 0644] blob
c++/scripts/projects/quickblastp/post_build/macosx/welcome.txt [new file with mode: 0644] blob
c++/scripts/projects/quickblastp/post_build/make_installers.py [new file with mode: 0755] blob
c++/scripts/projects/quickblastp/post_build/rpm/make_rpm.py [new file with mode: 0755] blob
c++/scripts/projects/quickblastp/post_build/rpm/ncbi-magicblast.spec [new file with mode: 0644] blob
c++/scripts/projects/quickblastp/post_build/rpm/ncbi-quickblastp.spec [new file with mode: 0644] blob
c++/scripts/projects/quickblastp/post_build/win/EnvVarUpdate.nsh [new file with mode: 0644] blob
c++/scripts/projects/quickblastp/post_build/win/make_win.py [new file with mode: 0644] blob
c++/scripts/projects/quickblastp/post_build/win/ncbi-blast.nsi [new file with mode: 0755] blob
c++/scripts/projects/quickblastp/post_build/win/ncbilogo.ico [new file with mode: 0644] blob
c++/scripts/projects/quickblastp/post_build/win/unix2dos.nsh [new file with mode: 0644] blob
c++/scripts/projects/quickblastp/project.lst [new file with mode: 0644] blob
c++/scripts/projects/rmblastn/ChangeLog [new file with mode: 0644] blob
c++/scripts/projects/rmblastn/LICENSE [new file with mode: 0644] blob
c++/scripts/projects/rmblastn/Manifest [new file with mode: 0644] blob
c++/scripts/projects/rmblastn/README [new file with mode: 0644] blob
c++/scripts/projects/rmblastn/components.link [new file with mode: 0644] blob
c++/scripts/projects/rmblastn/project.lst [new file with mode: 0644] blob
c++/scripts/projects/test_ccpp_read/ChangeLog [new file with mode: 0644] blob
c++/scripts/projects/test_ccpp_read/LICENSE [new file with mode: 0644] blob
c++/scripts/projects/test_ccpp_read/Manifest [new file with mode: 0644] blob
c++/scripts/projects/test_ccpp_read/README [new file with mode: 0644] blob
c++/scripts/projects/test_ccpp_read/components.link [new file with mode: 0644] blob
c++/scripts/projects/test_ccpp_read/project.lst [new file with mode: 0644] blob
c++/scripts/projects/xcode_cpp.lst [new file with mode: 0644] blob
c++/scripts/projects/xconnect.lst [new file with mode: 0644] blob
c++/scripts/projects/xmlwrapp/ChangeLog [new file with mode: 0644] blob
c++/scripts/projects/xmlwrapp/LICENSE [new file with mode: 0644] blob
c++/scripts/projects/xmlwrapp/Manifest [new file with mode: 0644] blob
c++/scripts/projects/xmlwrapp/README [new file with mode: 0644] blob
c++/scripts/projects/xmlwrapp/components.link [new file with mode: 0644] blob
c++/scripts/projects/xmlwrapp/project.lst [new file with mode: 0644] blob
c++/scripts/projects/xutil.lst [new file with mode: 0644] blob
c++/src/CMakeLists.txt [new file with mode: 0644] blob
c++/src/Makefile.in [new file with mode: 0644] blob
c++/src/algo/CMakeLists.txt [new file with mode: 0644] blob
c++/src/algo/Makefile.in [new file with mode: 0644] blob
c++/src/algo/blast/CMakeLists.txt [new file with mode: 0644] blob
c++/src/algo/blast/Makefile.blast_macros.mk [new file with mode: 0644] blob
c++/src/algo/blast/Makefile.in [new file with mode: 0644] blob
c++/src/algo/blast/api/CMakeLists.txt [new file with mode: 0644] blob
c++/src/algo/blast/api/CMakeLists.xblast.lib.txt [new file with mode: 0644] blob
c++/src/algo/blast/api/Makefile.in [new file with mode: 0644] blob
c++/src/algo/blast/api/Makefile.xblast.lib [new file with mode: 0644] blob
c++/src/algo/blast/api/Makefile.xblast.lib.msvc [new file with mode: 0644] blob
c++/src/algo/blast/api/Makefile.xblast.lib.unix [new file with mode: 0644] blob
c++/src/algo/blast/api/bioseq_extract_data_priv.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/bioseq_extract_data_priv.hpp [new file with mode: 0644] blob
c++/src/algo/blast/api/bl2seq.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/blast_advprot_options.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/blast_aux.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/blast_aux_priv.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/blast_aux_priv.hpp [new file with mode: 0644] blob
c++/src/algo/blast/api/blast_dbindex.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/blast_memento_priv.hpp [new file with mode: 0644] blob
c++/src/algo/blast/api/blast_mtlock.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/blast_node.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/blast_nucl_options.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/blast_objmgr_priv.hpp [new file with mode: 0644] blob
c++/src/algo/blast/api/blast_objmgr_tools.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/blast_options_builder.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/blast_options_cxx.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/blast_options_handle.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/blast_options_local_priv.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/blast_options_local_priv.hpp [new file with mode: 0644] blob
c++/src/algo/blast/api/blast_prot_options.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/blast_results.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/blast_rps_options.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/blast_seqalign.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/blast_seqalign.hpp [new file with mode: 0644] blob
c++/src/algo/blast/api/blast_seqinfosrc_aux.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/blast_setup.hpp [new file with mode: 0644] blob
c++/src/algo/blast/api/blast_setup_cxx.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/blast_usage_report.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/blastp_kmer_options.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/blastx_options.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/cdd_pssm_input.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/deltablast.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/deltablast_options.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/disc_nucl_options.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/dust_filter.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/dust_filter.hpp [new file with mode: 0644] blob
c++/src/algo/blast/api/effsearchspace_calc.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/local_blast.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/local_db_adapter.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/local_search.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/magicblast.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/magicblast_options.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/msa_pssm_input.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/objmgr_query_data.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/objmgrfree_query_data.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/phiblast_nucl_options.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/phiblast_prot_options.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/prelim_search_runner.hpp [new file with mode: 0644] blob
c++/src/algo/blast/api/prelim_stage.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/psi_pssm_input.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/psibl2seq.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/psiblast.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/psiblast_aux_priv.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/psiblast_aux_priv.hpp [new file with mode: 0644] blob
c++/src/algo/blast/api/psiblast_impl.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/psiblast_impl.hpp [new file with mode: 0644] blob
c++/src/algo/blast/api/psiblast_iteration.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/psiblast_options.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/pssm_engine.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/query_data.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/remote_blast.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/remote_search.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/repeats_filter_cxx.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/rps_aux.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/rpsblast_local.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/rpstblastn_options.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/search_strategy.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/seedtop.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/seqinfosrc_bioseq.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/seqinfosrc_bioseq.hpp [new file with mode: 0644] blob
c++/src/algo/blast/api/seqinfosrc_seqdb.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/seqinfosrc_seqvec.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/seqsrc_multiseq.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/seqsrc_query_factory.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/seqsrc_query_factory.hpp [new file with mode: 0644] blob
c++/src/algo/blast/api/seqsrc_seqdb.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/setup_factory.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/split_query.hpp [new file with mode: 0644] blob
c++/src/algo/blast/api/split_query_aux_priv.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/split_query_aux_priv.hpp [new file with mode: 0644] blob
c++/src/algo/blast/api/split_query_blk.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/split_query_blk.hpp [new file with mode: 0644] blob
c++/src/algo/blast/api/split_query_cxx.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/subj_ranges_set.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/tblastn_options.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/tblastx_options.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/traceback_stage.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/uniform_search.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/version.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/winmask_filter.cpp [new file with mode: 0644] blob
c++/src/algo/blast/api/winmask_filter.hpp [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/CMakeLists.blastinput.lib.txt [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/CMakeLists.txt [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/Makefile.blastinput.lib [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/Makefile.in [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/blast_args.cpp [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/blast_asn1_input.cpp [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/blast_fasta_input.cpp [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/blast_input.cpp [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/blast_input_aux.cpp [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/blast_scope_src.cpp [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/blastn_args.cpp [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/blastp_args.cpp [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/blastx_args.cpp [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/cmdline_flags.cpp [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/deltablast_args.cpp [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/igblastn_args.cpp [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/igblastp_args.cpp [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/kblastp_args.cpp [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/magicblast_args.cpp [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/psiblast_args.cpp [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/rmblastn_args.cpp [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/rpsblast_args.cpp [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/rpstblastn_args.cpp [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/tblastn_args.cpp [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/tblastx_args.cpp [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/CMakeLists.blastinput_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/CMakeLists.txt [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/Makefile.blastinput_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/Makefile.in [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/blast_input_unit_test_aux.hpp [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/blast_scope_src_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/DF-1.txt [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/WGS_test.ndb [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/WGS_test.nhr [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/WGS_test.nin [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/WGS_test.nog [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/WGS_test.nos [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/WGS_test.not [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/WGS_test.nsq [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/WGS_test.ntf [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/WGS_test.nto [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/aa.129295 [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/aa.cat [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/accession.txt [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/accessions.txt [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/accgis_nl.txt [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/bad_input.txt [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/bad_seqid.txt [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/gbreport.txt [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/gi.txt [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/gis.txt [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/gis_bad_input.txt [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/invalid_gi.txt [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/isprot.fa [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/localid.txt [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/nt.555 [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/nt.cat [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/nt.multiple_queries.one.empty [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/nucl_acc.txt [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/nucl_w_n.fsa [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/paired_reads.asn [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/paired_reads.fa [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/paired_reads.fastc [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/paired_reads.fastq [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/paired_reads_1.asn [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/paired_reads_1.fa [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/paired_reads_1.fastq [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/paired_reads_2.asn [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/paired_reads_2.fa [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/paired_reads_2.fastq [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/pdb_test.pdb [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/pdb_test.phr [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/pdb_test.pin [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/pdb_test.pog [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/pdb_test.pos [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/pdb_test.pot [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/pdb_test.psq [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/pdb_test.ptf [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/pdb_test.pto [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/prot_acc.txt [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/prot_gi.txt [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/prot_w_gaps.txt [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/raw_fasta.na [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/raw_fasta2.na [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/sra_seqid.txt [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/test.pdb_ids [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/ti.txt [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/tiny.fa [new file with mode: 0644] blob
c++/src/algo/blast/blastinput/unit_test/data/tis.txt [new file with mode: 0644] blob
c++/src/algo/blast/composition_adjustment/CMakeLists.composition_adjustment.lib.txt [new file with mode: 0644] blob
c++/src/algo/blast/composition_adjustment/CMakeLists.txt [new file with mode: 0644] blob
c++/src/algo/blast/composition_adjustment/Makefile.composition_adjustment.lib [new file with mode: 0644] blob
c++/src/algo/blast/composition_adjustment/Makefile.composition_adjustment.lib.unix [new file with mode: 0644] blob
c++/src/algo/blast/composition_adjustment/Makefile.in [new file with mode: 0644] blob
c++/src/algo/blast/composition_adjustment/compo_heap.c [new file with mode: 0644] blob
c++/src/algo/blast/composition_adjustment/compo_mode_condition.c [new file with mode: 0644] blob
c++/src/algo/blast/composition_adjustment/composition_adjustment.c [new file with mode: 0644] blob
c++/src/algo/blast/composition_adjustment/matrix_frequency_data.c [new file with mode: 0644] blob
c++/src/algo/blast/composition_adjustment/nlm_linear_algebra.c [new file with mode: 0644] blob
c++/src/algo/blast/composition_adjustment/optimize_target_freq.c [new file with mode: 0644] blob
c++/src/algo/blast/composition_adjustment/redo_alignment.c [new file with mode: 0644] blob
c++/src/algo/blast/composition_adjustment/smith_waterman.c [new file with mode: 0644] blob
c++/src/algo/blast/composition_adjustment/unified_pvalues.c [new file with mode: 0644] blob
c++/src/algo/blast/core/CMakeLists.blast.lib.txt [new file with mode: 0644] blob
c++/src/algo/blast/core/CMakeLists.blast.objs.txt [new file with mode: 0644] blob
c++/src/algo/blast/core/CMakeLists.txt [new file with mode: 0644] blob
c++/src/algo/blast/core/Makefile.blast.lib [new file with mode: 0644] blob
c++/src/algo/blast/core/Makefile.blast.lib.unix [new file with mode: 0644] blob
c++/src/algo/blast/core/Makefile.in [new file with mode: 0644] blob
c++/src/algo/blast/core/README [new file with mode: 0644] blob
c++/src/algo/blast/core/aa_ungapped.c [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_aalookup.c [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_aascan.c [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_diagnostics.c [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_dynarray.c [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_dynarray.h [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_encoding.c [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_engine.c [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_extend.c [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_filter.c [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_gapalign.c [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_gapalign_priv.h [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_hits.c [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_hits_priv.h [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_hspstream.c [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_hspstream_mt_utils.c [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_hspstream_mt_utils.h [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_itree.c [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_itree.h [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_kappa.c [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_lookup.c [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_message.c [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_nalookup.c [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_nascan.c [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_options.c [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_parameters.c [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_posit.c [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_posit.h [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_program.c [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_psi.c [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_psi_priv.c [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_psi_priv.h [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_query_info.c [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_seg.c [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_seqsrc.c [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_setup.c [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_stat.c [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_sw.c [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_traceback.c [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_traceback_mt_priv.c [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_traceback_mt_priv.h [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_tune.c [new file with mode: 0644] blob
c++/src/algo/blast/core/blast_util.c [new file with mode: 0644] blob
c++/src/algo/blast/core/boost_erf.c [new file with mode: 0644] blob
c++/src/algo/blast/core/boost_erf.h [new file with mode: 0644] blob
c++/src/algo/blast/core/gapinfo.c [new file with mode: 0644] blob
c++/src/algo/blast/core/gencode_singleton.c [new file with mode: 0644] blob
c++/src/algo/blast/core/greedy_align.c [new file with mode: 0644] blob
c++/src/algo/blast/core/hspfilter_besthit.c [new file with mode: 0644] blob
c++/src/algo/blast/core/hspfilter_collector.c [new file with mode: 0644] blob
c++/src/algo/blast/core/hspfilter_culling.c [new file with mode: 0644] blob
c++/src/algo/blast/core/hspfilter_mapper.c [new file with mode: 0644] blob
c++/src/algo/blast/core/index_ungapped.c [new file with mode: 0644] blob
c++/src/algo/blast/core/index_ungapped.h [new file with mode: 0644] blob
c++/src/algo/blast/core/jumper.c [new file with mode: 0644] blob
c++/src/algo/blast/core/jumper.h [new file with mode: 0644] blob
c++/src/algo/blast/core/link_hsps.c [new file with mode: 0644] blob
c++/src/algo/blast/core/lookup_util.c [new file with mode: 0644] blob
c++/src/algo/blast/core/lookup_wrap.c [new file with mode: 0644] blob
c++/src/algo/blast/core/masksubj.inl [new file with mode: 0644] blob
c++/src/algo/blast/core/matrix_freq_ratios.c [new file with mode: 0644] blob
c++/src/algo/blast/core/matrix_freq_ratios.h [new file with mode: 0644] blob
c++/src/algo/blast/core/na_ungapped.c [new file with mode: 0644] blob
c++/src/algo/blast/core/ncbi_erf.c [new file with mode: 0644] blob
c++/src/algo/blast/core/ncbi_math.c [new file with mode: 0644] blob
c++/src/algo/blast/core/ncbi_std.c [new file with mode: 0644] blob
c++/src/algo/blast/core/pattern.c [new file with mode: 0644] blob
c++/src/algo/blast/core/pattern_priv.h [new file with mode: 0644] blob
c++/src/algo/blast/core/phi_extend.c [new file with mode: 0644] blob
c++/src/algo/blast/core/phi_gapalign.c [new file with mode: 0644] blob
c++/src/algo/blast/core/phi_lookup.c [new file with mode: 0644] blob
c++/src/algo/blast/core/spliced_hits.c [new file with mode: 0644] blob
c++/src/algo/blast/core/split_query.c [new file with mode: 0644] blob
c++/src/algo/blast/dbindex/CMakeLists.txt [new file with mode: 0644] blob
c++/src/algo/blast/dbindex/CMakeLists.xalgoblastdbindex.lib.txt [new file with mode: 0644] blob
c++/src/algo/blast/dbindex/Makefile.in [new file with mode: 0644] blob
c++/src/algo/blast/dbindex/Makefile.xalgoblastdbindex.lib [new file with mode: 0644] blob
c++/src/algo/blast/dbindex/README.usage [new file with mode: 0644] blob
c++/src/algo/blast/dbindex/dbindex.cpp [new file with mode: 0644] blob
c++/src/algo/blast/dbindex/dbindex_factory.cpp [new file with mode: 0644] blob
c++/src/algo/blast/dbindex/dbindex_search.cpp [new file with mode: 0644] blob
c++/src/algo/blast/dbindex/makeindex/CMakeLists.makeindex.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/dbindex/makeindex/CMakeLists.txt [new file with mode: 0644] blob
c++/src/algo/blast/dbindex/makeindex/Makefile.in [new file with mode: 0644] blob
c++/src/algo/blast/dbindex/makeindex/Makefile.makeindex.app [new file with mode: 0644] blob
c++/src/algo/blast/dbindex/makeindex/README.usage [new file with mode: 0644] blob
c++/src/algo/blast/dbindex/makeindex/main.cpp [new file with mode: 0644] blob
c++/src/algo/blast/dbindex/makeindex/mkindex_app.cpp [new file with mode: 0644] blob
c++/src/algo/blast/dbindex/makeindex/mkindex_app.hpp [new file with mode: 0644] blob
c++/src/algo/blast/dbindex/sequence_istream_bdb.cpp [new file with mode: 0644] blob
c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp [new file with mode: 0644] blob
c++/src/algo/blast/format/CMakeLists.txt [new file with mode: 0644] blob
c++/src/algo/blast/format/CMakeLists.xblastformat.lib.txt [new file with mode: 0644] blob
c++/src/algo/blast/format/Makefile.in [new file with mode: 0644] blob
c++/src/algo/blast/format/Makefile.xblastformat.lib [new file with mode: 0644] blob
c++/src/algo/blast/format/blast_async_format.cpp [new file with mode: 0644] blob
c++/src/algo/blast/format/blast_format.cpp [new file with mode: 0644] blob
c++/src/algo/blast/format/blastfmtutil.cpp [new file with mode: 0644] blob
c++/src/algo/blast/format/blastxml2_format.cpp [new file with mode: 0644] blob
c++/src/algo/blast/format/blastxml_format.cpp [new file with mode: 0644] blob
c++/src/algo/blast/format/build_archive.cpp [new file with mode: 0644] blob
c++/src/algo/blast/format/data4xml2format.cpp [new file with mode: 0644] blob
c++/src/algo/blast/format/data4xmlformat.cpp [new file with mode: 0644] blob
c++/src/algo/blast/format/sam.cpp [new file with mode: 0644] blob
c++/src/algo/blast/format/vecscreen_run.cpp [new file with mode: 0644] blob
c++/src/algo/blast/igblast/CMakeLists.igblast.lib.txt [new file with mode: 0644] blob
c++/src/algo/blast/igblast/CMakeLists.txt [new file with mode: 0644] blob
c++/src/algo/blast/igblast/Makefile.igblast.lib [new file with mode: 0644] blob
c++/src/algo/blast/igblast/Makefile.in [new file with mode: 0644] blob
c++/src/algo/blast/igblast/igblast.cpp [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/CMakeLists.proteinkmer.lib.txt [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/CMakeLists.txt [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/Makefile.in [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/Makefile.proteinkmer.lib [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/blastkmer.cpp [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/blastkmerindex.cpp [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/blastkmeroptions.cpp [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/blastkmerresults.cpp [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/blastkmerutils.cpp [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/kblastapi.cpp [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/mhfile.cpp [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/pearson.cpp [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/pearson.hpp [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/unit_test/CMakeLists.proteinkmer_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/unit_test/CMakeLists.txt [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/unit_test/Makefile.in [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/unit_test/Makefile.proteinkmer_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/unit_test/data/129295.fsa [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/unit_test/data/129295.iupacaa [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/unit_test/data/129295.ncbieaa [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/unit_test/data/129295.stdaa [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/unit_test/data/129296.ncbieaa [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/unit_test/data/XP_001468867.phr [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/unit_test/data/XP_001468867.pin [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/unit_test/data/XP_001468867.pnd [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/unit_test/data/XP_001468867.pni [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/unit_test/data/XP_001468867.pog [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/unit_test/data/XP_001468867.psd [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/unit_test/data/XP_001468867.psi [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/unit_test/data/XP_001468867.psq [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/unit_test/data/allX.asn [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/unit_test/data/bad.asn [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/unit_test/data/manyXs.phr [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/unit_test/data/manyXs.pin [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/unit_test/data/manyXs.pog [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/unit_test/data/manyXs.psd [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/unit_test/data/manyXs.psi [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/unit_test/data/manyXs.psq [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/unit_test/data/nr_test.phr [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/unit_test/data/nr_test.pin [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/unit_test/data/nr_test.pnd [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/unit_test/data/nr_test.pni [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/unit_test/data/nr_test.pog [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/unit_test/data/nr_test.psd [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/unit_test/data/nr_test.psi [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/unit_test/data/nr_test.psq [new file with mode: 0644] blob
c++/src/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/CMakeLists.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/Makefile.in [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.aalookup_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.aascan_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.bl2seq_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.blast_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.blast_unit_test_util.lib.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.blastdiag_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.blastengine_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.blastextend_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.blastfilter_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.blasthits_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.blastoptions_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.blastsetup_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.delta_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.gapinfo_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.gencode_singleton_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.hspfilter_besthit_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.hspfilter_culling_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.hspstream_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.linkhsp_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.magicblast_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.msa2pssm_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.ntlookup_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.ntscan_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.optionshandle_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.phiblast_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.prelimsearch_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.psibl2seq_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.psiblast_iteration_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.psiblast_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.pssmcreate_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.pssmenginefreqratios_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.querydata_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.queryinfo_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.redoalignment_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.remote_blast_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.rmblast_blasthits_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.rmblast_traceback_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.rps_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.scoreblk_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.search_strategy_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.seqalign_util.lib.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.seqinfosrc_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.seqsrc_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.setupfactory_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.split_query_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.stat_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.subj_ranges_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.traceback_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.tracebacksearch_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.uniform_search_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/CMakeLists.version_reference_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.aalookup_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.aascan_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.bl2seq_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.blast_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.blast_unit_test_util.lib [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.blastdiag_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.blastengine_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.blastextend_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.blastfilter_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.blasthits_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.blastoptions_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.blastsetup_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.delta_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.gapinfo_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.gencode_singleton_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.hspfilter_besthit_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.hspfilter_culling_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.hspstream_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.in [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.linkhsp_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.magicblast_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.msa2pssm_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.ntlookup_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.ntscan_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.optionshandle_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.phiblast_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.prelimsearch_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.psibl2seq_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.psiblast_iteration_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.psiblast_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.pssmcreate_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.pssmenginefreqratios_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.querydata_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.queryinfo_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.redoalignment_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.remote_blast_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.rmblast_blasthits_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.rmblast_traceback_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.rps_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.scoreblk_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.search_strategy_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.seqalign_util.lib [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.seqinfosrc_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.seqsrc_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.setupfactory_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.split_query_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.stat_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.subj_ranges_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.traceback_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.tracebacksearch_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.uniform_search_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/Makefile.version_reference_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/aalookup_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/aalookup_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/aascan_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/bl2seq_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/bl2seq_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/blast_test_util.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/blast_test_util.hpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/blast_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/blast_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/blastdiag_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/blastdiag_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/blastengine_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/blastextend_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/blastextend_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/blastfilter_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/blastfilter_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/blasthits_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/blasthits_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/blastsetup_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/blastsetup_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/20p43g.matrix [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/7450545.seqentry.asn [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/BLOSUMTEST [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/Sample_gilist.p.gil [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/aa.129295.pssm.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/archive.asn [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/archive.bl2seq.asn [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/archive.multiple_queries.asn [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/biased.fsa [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/blastn_size4a.fsa [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/blastn_size4b.fsa [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/blastn_size4c.fsa [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/blastn_size4d.fsa [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/blastp_compstats.fa [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/cdd-129295.asn [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/delta_seq.asn [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/deltatest.aux [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/deltatest.freq [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/deltatest.loo [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/deltatest.obsr [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/deltatest.phr [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/deltatest.pin [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/deltatest.psd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/deltatest.psi [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/deltatest.psq [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/deltatest.rps [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/deltatest.wcounts [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/deltatest_nocbs.aux [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/deltatest_nocbs.loo [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/deltatest_nocbs.obsr [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/deltatest_nocbs.phr [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/deltatest_nocbs.pin [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/deltatest_nocbs.psd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/deltatest_nocbs.psi [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/deltatest_nocbs.psq [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/deltatest_nocbs.rps [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/deltatest_nocbs.wcounts [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/empty_result_set.asn [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/freqsprepos.dat [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/greedy1a.fsa [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/greedy1b.fsa [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/long_seqs.ndb [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/long_seqs.nhr [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/long_seqs.nin [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/long_seqs.nog [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/long_seqs.nos [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/long_seqs.not [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/long_seqs.nsq [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/long_seqs.ntf [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/long_seqs.nto [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/magicblast_concordant.asn [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/magicblast_discordant.asn [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/magicblast_nonmatch.asn [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/magicblast_paired.asn [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/magicblast_queries.asn [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/masked.fsa [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/msa.clustalw.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/mult_queries_1fully_masked.fsa [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/nr-129295.new.asn.short [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/nt.41646578.naa [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/nt.41646578.nab [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/nt.41646578.nac [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/nt.41646578.nhr [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/nt.41646578.nin [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/nt.41646578.nog [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/nt.41646578.nsd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/nt.41646578.nsi [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/nt.41646578.nsq [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/phi.ss.asn [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/pombe.nhr [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/pombe.nin [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/pombe.nog [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/pombe.nsd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/pombe.nsi [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/pombe.nsq [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/pssm_freq_ratios.asn [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/pssm_zero_fratios.asn [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/rpstest_be.aux [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/rpstest_be.loo [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/rpstest_be.phr [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/rpstest_be.pin [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/rpstest_be.pnd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/rpstest_be.pni [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/rpstest_be.psd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/rpstest_be.psi [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/rpstest_be.psq [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/rpstest_be.rps [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/rpstest_le.aux [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/rpstest_le.freq [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/rpstest_le.loo [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/rpstest_le.phr [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/rpstest_le.pin [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/rpstest_le.pnd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/rpstest_le.pni [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/rpstest_le.psd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/rpstest_le.psi [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/rpstest_le.psq [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/rpstest_le.rps [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/sample_msa.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/selenocysteines.fsa [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/seq_entry_gis.asn [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/seq_entry_lcl_id.asn [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/seqn.nhr [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/seqn.nin [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/seqn.nnd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/seqn.nni [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/seqn.nsd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/seqn.nsi [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/seqn.nsq [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/seqp.phr [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/seqp.pin [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/seqp.pnd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/seqp.pni [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/seqp.psd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/seqp.psi [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/seqp.psq [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/split_query.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/ss.asn [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/ss.bl2seq.asn [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/ss.blastp.asn [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/ss.filter.asn [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/ss.xml [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/webpsi.1stround.ss.asn [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/data/webpsi.2ndround.ss.asn [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/delta_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/delta_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/gapinfo_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/gapinfo_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/gencode_singleton_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/gencode_singleton_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/hspfilter_besthit_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/hspfilter_besthit_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/hspfilter_culling_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/hspfilter_culling_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/hspstream_test_util.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/hspstream_test_util.hpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/hspstream_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/hspstream_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/linkhsp_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/linkhsp_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/magicblast_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/magicblast_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/mockseqsrc1_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/mockseqsrc2_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/msa2pssm_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/msa2pssm_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/neutral_seqalign.hpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/ntlookup_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/ntlookup_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/ntscan_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/ntscan_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/nuclwordfinder_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/optionshandle_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/optionshandle_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/phiblast_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/phiblast_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/prelimsearch_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/prelimsearch_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/psibl2seq_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/psibl2seq_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/psiblast_iteration_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/psiblast_iteration_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/psiblast_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/psiblast_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/pssm_test_util.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/pssm_test_util.hpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/pssmcreate_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/pssmcreate_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/pssmenginefreqratios_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/pssmenginefreqratios_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/querydata_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/queryinfo_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/queryinfo_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/redoalignment_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/redoalignment_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/remote_blast_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/remote_blast_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/rmblast_blasthits_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/rmblast_traceback_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/rps_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/rps_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/scoreblk_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/scoreblk_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/search_strategy_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/search_strategy_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/seqalign_cmp.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/seqalign_cmp.hpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/seqalign_set_convert.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/seqalign_set_convert.hpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/seqinfosrc_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/seqinfosrc_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/seqsrc_mock.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/seqsrc_mock.hpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/seqsrc_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/seqsrc_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/setupfactory_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/setupfactory_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/split_query_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/split_query_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/stat_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/stat_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/subj_ranges_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/subj_ranges_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/test_objmgr.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/test_objmgr.hpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/traceback_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/traceback_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/tracebacksearch_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/tracebacksearch_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/uniform_search_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/uniform_search_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/version_reference_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/api/version_reference_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/blast_format/CMakeLists.blast_format_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/blast_format/CMakeLists.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/blast_format/Makefile.blast_format_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/blast_format/Makefile.in [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/blast_format/blast_format_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/blast_format/blastfmtutil_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/blast_format/data/archive.asn [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/blast_format/data/blastfmtutil-cppunit.aln [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/blast_format/data/blastfmtutil-querycoverage.aln [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/blast_format/data/gilist_test.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/blast_format/data/in_test.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/blast_format/seqalignfilter_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/blast_format/vecscreen_run_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/blast_mt/blast_mt_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/blastdb/CMakeLists.bdbloader_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/blastdb/CMakeLists.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/blastdb/Makefile.bdbloader_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/blastdb/Makefile.in [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/blastdb/bdbloader_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/blastdb/data/ecoli.gis [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/CMakeLists.seqdb_lmdb_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/CMakeLists.seqdb_unit_test.app.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/CMakeLists.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/Makefile.in [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/Makefile.seqdb_lmdb_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/Makefile.seqdb_unit_test.app [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/10_seqs_alias.nal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/15_seqs.gil [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/15_seqs_v5.ndb [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/15_seqs_v5.nhr [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/15_seqs_v5.nin [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/15_seqs_v5.nnd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/15_seqs_v5.nni [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/15_seqs_v5.nog [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/15_seqs_v5.nos [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/15_seqs_v5.not [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/15_seqs_v5.nsq [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/15_seqs_v5.ntf [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/15_seqs_v5.nto [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/alias.seqidlist [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/alias.seqidlist.bsl [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/alias_2_v4.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/alias_2_v5.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/all_cheese.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/big_gi.pnd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/big_gi.pni [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/broken-mask-data-db.paa [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/broken-mask-data-db.pab [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/broken-mask-data-db.phr [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/broken-mask-data-db.pin [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/broken-mask-data-db.pnd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/broken-mask-data-db.pni [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/broken-mask-data-db.pog [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/broken-mask-data-db.psd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/broken-mask-data-db.psi [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/broken-mask-data-db.psq [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/cheese.gil [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/deltaseq [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/empty-mask-data-db.naa [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/empty-mask-data-db.nab [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/empty-mask-data-db.nac [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/empty-mask-data-db.nhr [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/empty-mask-data-db.nin [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/empty-mask-data-db.nog [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/empty-mask-data-db.nsd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/empty-mask-data-db.nsi [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/empty-mask-data-db.nsq [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/empty.pin [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/f555.nhr [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/f555.nin [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/f555.nsq [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/f556.nhr [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/f556.nin [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/f556.nsq [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ipg_test.pdb [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ipg_test.phr [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ipg_test.pin [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ipg_test.pnd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ipg_test.pni [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ipg_test.pog [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ipg_test.pos [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ipg_test.pot [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ipg_test.ppd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ipg_test.ppi [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ipg_test.psq [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ipg_test.ptf [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ipg_test.pto [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/long-tis.nhr [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/long-tis.nin [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/long-tis.nsd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/long-tis.nsi [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/long-tis.nsq [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/long-tis.ntd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/long-tis.nti [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/mask-data-db.paa [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/mask-data-db.pab [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/mask-data-db.pac [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/mask-data-db.phr [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/mask-data-db.pin [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/mask-data-db.pnd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/mask-data-db.pni [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/mask-data-db.pog [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/mask-data-db.psd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/mask-data-db.psi [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/mask-data-db.psq [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/mini-gnomon.phr [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/mini-gnomon.pin [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/mini-gnomon.pog [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/mini-gnomon.psd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/mini-gnomon.psi [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/mini-gnomon.psq [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/multi_list_alias_v4.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/multi_list_alias_v5.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/nrshort.old.phr [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/nrshort.old.pin [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/nrshort.old.pnd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/nrshort.old.pni [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/nrshort.old.pog [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/nrshort.old.psd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/nrshort.old.psi [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/nrshort.old.psq [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/nrshort.phr [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/nrshort.pin [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/nrshort.pnd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/nrshort.pni [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/nrshort.pog [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/nrshort.psd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/nrshort.psi [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/nrshort.psq [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ntshort.nhr [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ntshort.nin [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ntshort.nnd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ntshort.nni [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ntshort.nog [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ntshort.nsd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ntshort.nsi [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ntshort.nsq [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ntshort.old.nhr [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ntshort.old.nin [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ntshort.old.nnd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ntshort.old.nni [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ntshort.old.nog [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ntshort.old.nsd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ntshort.old.nsi [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ntshort.old.nsq [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/prot345.sil [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/prot345.sil.bsl [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/prot345b.gil [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/prot345t.gil [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/prot_alias.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/prot_alias_v5.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/even10_100.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/even10_130.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/even1_1.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/even1_10.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/even1_2.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/even1_5.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/even1_7.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/even1_8.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/even1_9.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/even3_13.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/even3_7.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/even8_128.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/even8_129.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/even8_130.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/even9_128.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/even9_129.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/even9_130.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/evenp.msk [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/odd10_100.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/odd10_130.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/odd1_1.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/odd1_10.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/odd1_2.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/odd1_5.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/odd1_7.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/odd1_8.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/odd1_9.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/odd3_13.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/odd3_7.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/odd8_128.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/odd8_129.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/odd8_130.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/odd9_128.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/odd9_129.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/odd9_130.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/oddp.msk [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/prime10_100.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/prime10_130.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/prime1_1.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/prime1_10.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/prime1_2.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/prime1_5.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/prime1_7.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/prime1_8.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/prime1_9.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/prime3_13.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/prime3_7.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/prime8_128.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/prime8_129.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/prime8_130.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/prime9_128.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/prime9_129.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/prime9_130.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/primep.msk [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/range10_100.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/range10_130.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/range1_1.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/range1_10.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/range1_2.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/range1_5.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/range1_7.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/range1_8.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/range1_9.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/range3_13.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/range3_7.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/range8_128.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/range8_129.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/range8_130.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/range9_128.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/range9_129.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/range9_130.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/seqp15.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/twenties.gil [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/twenty.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/ranges/twenty15.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/restart.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/seqn.nhd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/seqn.nhi [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/seqn.nhr [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/seqn.nin [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/seqn.nnd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/seqn.nni [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/seqn.nog [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/seqn.nsd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/seqn.nsi [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/seqn.nsq [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/seqn_3gis.gil [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/seqp.phd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/seqp.phi [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/seqp.phr [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/seqp.pin [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/seqp.pnd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/seqp.pni [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/seqp.pog [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/seqp.psd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/seqp.psi [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/seqp.psq [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/seqp_v5.pdb [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/seqp_v5.pdb-lock [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/seqp_v5.phd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/seqp_v5.phi [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/seqp_v5.phr [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/seqp_v5.pin [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/seqp_v5.pnd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/seqp_v5.pni [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/seqp_v5.pog [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/seqp_v5.pos [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/seqp_v5.pot [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/seqp_v5.psq [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/seqp_v5.ptf [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/seqp_v5.ptf-lock [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/seqp_v5.pto [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/short-tis.nhr [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/short-tis.nin [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/short-tis.nsd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/short-tis.nsi [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/short-tis.nsq [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/short-tis.ntd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/short-tis.nti [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/skip_vols_mix.nal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/sparse_id.nhr [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/sparse_id.nin [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/sparse_id.nnd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/sparse_id.nni [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/sparse_id.nog [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/sparse_id.nsd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/sparse_id.nsi [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/sparse_id.nsq [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/swiss_cheese.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/taxid_alias.nal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/taxids.list [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/test.entries [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/test.entries.bsl [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/test.gilist [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/test.seqidlist [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/test.seqidlist.bsl [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/test_seqidlist_v4.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/test_seqidlist_v5.pal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/test_v4.phr [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/test_v4.pin [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/test_v4.pnd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/test_v4.pni [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/test_v4.pog [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/test_v4.psd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/test_v4.psi [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/test_v4.psq [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/test_v5.pdb [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/test_v5.pdb-lock [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/test_v5.phr [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/test_v5.pin [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/test_v5.pnd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/test_v5.pni [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/test_v5.pog [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/test_v5.pos [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/test_v5.pot [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/test_v5.psq [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/test_v5.ptf [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/test_v5.ptf-lock [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/test_v5.pto [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/testfile1.sqlite [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/totals.nal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/user-column-db.paa [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/user-column-db.pab [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/user-column-db.phr [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/user-column-db.pin [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/user-column-db.pnd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/user-column-db.pni [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/user-column-db.pog [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/user-column-db.psd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/user-column-db.psi [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/user-column-db.psq [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/user-column.xaa [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/user-column.xab [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/vols_v5.00.nhr [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/vols_v5.00.nin [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/vols_v5.00.nnd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/vols_v5.00.nni [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/vols_v5.00.nog [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/vols_v5.00.nsq [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/vols_v5.01.nhr [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/vols_v5.01.nin [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/vols_v5.01.nnd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/vols_v5.01.nni [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/vols_v5.01.nog [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/vols_v5.01.nsq [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/vols_v5.nal [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/vols_v5.ndb [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/vols_v5.nos [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/vols_v5.not [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/vols_v5.ntf [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/vols_v5.nto [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/wgs.AADN.gil [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/wgs.ABDC.gil [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/wgs_dblist.txt [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/wp_duplicate_ids_negative_list.bsl [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/wp_nr.phr [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/wp_nr.pin [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/wp_nr.pnd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/wp_nr.pni [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/wp_nr.pog [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/wp_nr.ppd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/wp_nr.ppi [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/wp_nr.psd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/wp_nr.psi [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/wp_nr.psq [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/wp_nr_v5.pdb [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/wp_nr_v5.pdb-lock [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/wp_nr_v5.phr [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/wp_nr_v5.pin [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/wp_nr_v5.pnd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/wp_nr_v5.pni [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/wp_nr_v5.pog [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/wp_nr_v5.pos [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/wp_nr_v5.pot [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/wp_nr_v5.ppd [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/wp_nr_v5.ppi [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/wp_nr_v5.psq [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/wp_nr_v5.ptf [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/wp_nr_v5.ptf-lock [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/wp_nr_v5.pto [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/wp_single_id.list [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/wp_single_id.list.bsl [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/data/wp_single_neg_list.bsl [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_lmdb_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp [new file with mode: 0644] blob
c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.ini [new file with mode: 0644] blob
c++/src/algo/dustmask/CMakeLists.txt [new file with mode: 0644] blob
c++/src/algo/dustmask/CMakeLists.xalgodustmask.lib.txt [new file with mode: 0644] blob
c++/src/algo/dustmask/Makefile.in [new file with mode: 0644] blob
c++/src/algo/dustmask/Makefile.xalgodustmask.lib [new file with mode: 0644] blob
c++/src/algo/dustmask/symdust.cpp [new file with mode: 0644] blob
c++/src/algo/segmask/CMakeLists.txt [new file with mode: 0644] blob
c++/src/algo/segmask/CMakeLists.xalgosegmask.lib.txt [new file with mode: 0644] blob
c++/src/algo/segmask/Makefile.in [new file with mode: 0644] blob
c++/src/algo/segmask/Makefile.xalgosegmask.lib [new file with mode: 0644] blob
c++/src/algo/segmask/segmask.cpp [new file with mode: 0644] blob
c++/src/algo/winmask/CMakeLists.txt [new file with mode: 0644] blob
c++/src/algo/winmask/CMakeLists.xalgowinmask.lib.txt [new file with mode: 0644] blob
c++/src/algo/winmask/Makefile.in [new file with mode: 0644] blob
c++/src/algo/winmask/Makefile.xalgowinmask.lib [new file with mode: 0644] blob
c++/src/algo/winmask/seq_masker.cpp [new file with mode: 0644] blob
c++/src/algo/winmask/seq_masker_cache_boost.cpp [new file with mode: 0644] blob
c++/src/algo/winmask/seq_masker_istat.cpp [new file with mode: 0644] blob
c++/src/algo/winmask/seq_masker_istat_ascii.cpp [new file with mode: 0644] blob
c++/src/algo/winmask/seq_masker_istat_bin.cpp [new file with mode: 0644] blob
c++/src/algo/winmask/seq_masker_istat_factory.cpp [new file with mode: 0644] blob
c++/src/algo/winmask/seq_masker_istat_oascii.cpp [new file with mode: 0644] blob
c++/src/algo/winmask/seq_masker_istat_obinary.cpp [new file with mode: 0644] blob
c++/src/algo/winmask/seq_masker_ostat.cpp [new file with mode: 0644] blob
c++/src/algo/winmask/seq_masker_ostat_ascii.cpp [new file with mode: 0644] blob
c++/src/algo/winmask/seq_masker_ostat_bin.cpp [new file with mode: 0644] blob
c++/src/algo/winmask/seq_masker_ostat_factory.cpp [new file with mode: 0644] blob
c++/src/algo/winmask/seq_masker_ostat_opt.cpp [new file with mode: 0644] blob
c++/src/algo/winmask/seq_masker_ostat_opt_ascii.cpp [new file with mode: 0644] blob
c++/src/algo/winmask/seq_masker_ostat_opt_bin.cpp [new file with mode: 0644] blob
c++/src/algo/winmask/seq_masker_score_mean.cpp [new file with mode: 0644] blob
c++/src/algo/winmask/seq_masker_score_mean_glob.cpp [new file with mode: 0644] blob
c++/src/algo/winmask/seq_masker_score_min.cpp [new file with mode: 0644] blob
c++/src/algo/winmask/seq_masker_uset_array.cpp [new file with mode: 0644] blob
c++/src/algo/winmask/seq_masker_uset_hash.cpp [new file with mode: 0644] blob
c++/src/algo/winmask/seq_masker_uset_simple.cpp [new file with mode: 0644] blob
c++/src/algo/winmask/seq_masker_util.cpp [new file with mode: 0644] blob
c++/src/algo/winmask/seq_masker_window.cpp [new file with mode: 0644] blob
c++/src/algo/winmask/seq_masker_window_ambig.cpp [new file with mode: 0644] blob
c++/src/algo/winmask/seq_masker_window_pattern.cpp [new file with mode: 0644] blob
c++/src/algo/winmask/seq_masker_window_pattern_ambig.cpp [new file with mode: 0644] blob
c++/src/algo/winmask/win_mask_config.cpp [new file with mode: 0644] blob
c++/src/algo/winmask/win_mask_counts_converter.cpp [new file with mode: 0644] blob
c++/src/algo/winmask/win_mask_dup_table.cpp [new file with mode: 0644] blob
c++/src/algo/winmask/win_mask_gen_counts.cpp [new file with mode: 0644] blob
c++/src/algo/winmask/win_mask_util.cpp [new file with mode: 0644] blob
c++/src/app/CMakeLists.txt [new file with mode: 0644] blob
c++/src/app/Makefile.in [new file with mode: 0644] blob
c++/src/app/blast/CMakeLists.blast_app_util.lib.txt [new file with mode: 0644] blob
c++/src/app/blast/CMakeLists.blast_formatter.app.txt [new file with mode: 0644] blob
c++/src/app/blast/CMakeLists.blast_report.app.txt [new file with mode: 0644] blob
c++/src/app/blast/CMakeLists.blastn.app.txt [new file with mode: 0644] blob
c++/src/app/blast/CMakeLists.blastp.app.txt [new file with mode: 0644] blob
c++/src/app/blast/CMakeLists.blastx.app.txt [new file with mode: 0644] blob
c++/src/app/blast/CMakeLists.deltablast.app.txt [new file with mode: 0644] blob
c++/src/app/blast/CMakeLists.legacy_blast.txt [new file with mode: 0644] blob
c++/src/app/blast/CMakeLists.psiblast.app.txt [new file with mode: 0644] blob
c++/src/app/blast/CMakeLists.rpsblast.app.txt [new file with mode: 0644] blob
c++/src/app/blast/CMakeLists.rpstblastn.app.txt [new file with mode: 0644] blob
c++/src/app/blast/CMakeLists.seedtop.app.txt [new file with mode: 0644] blob
c++/src/app/blast/CMakeLists.tblastn.app.txt [new file with mode: 0644] blob
c++/src/app/blast/CMakeLists.tblastx.app.txt [new file with mode: 0644] blob
c++/src/app/blast/CMakeLists.txt [new file with mode: 0644] blob
c++/src/app/blast/CMakeLists.update_blastdb.txt [new file with mode: 0644] blob
c++/src/app/blast/Makefile.blast_app_util.lib [new file with mode: 0644] blob
c++/src/app/blast/Makefile.blast_formatter.app [new file with mode: 0644] blob
c++/src/app/blast/Makefile.blast_report.app [new file with mode: 0755] blob
c++/src/app/blast/Makefile.blastn.app [new file with mode: 0644] blob
c++/src/app/blast/Makefile.blastp.app [new file with mode: 0644] blob
c++/src/app/blast/Makefile.blastx.app [new file with mode: 0644] blob
c++/src/app/blast/Makefile.cleanup-blastdb-volumes [new file with mode: 0644] blob
c++/src/app/blast/Makefile.cleanup-blastdb-volumes.app [new file with mode: 0644] blob
c++/src/app/blast/Makefile.deltablast.app [new file with mode: 0644] blob
c++/src/app/blast/Makefile.get_species_taxids [new file with mode: 0644] blob
c++/src/app/blast/Makefile.get_species_taxids.app [new file with mode: 0644] blob
c++/src/app/blast/Makefile.in [new file with mode: 0644] blob
c++/src/app/blast/Makefile.legacy_blast [new file with mode: 0644] blob
c++/src/app/blast/Makefile.legacy_blast.app [new file with mode: 0644] blob
c++/src/app/blast/Makefile.psiblast.app [new file with mode: 0644] blob
c++/src/app/blast/Makefile.rpsblast.app [new file with mode: 0644] blob
c++/src/app/blast/Makefile.rpstblastn.app [new file with mode: 0644] blob
c++/src/app/blast/Makefile.seedtop.app [new file with mode: 0644] blob
c++/src/app/blast/Makefile.tblastn.app [new file with mode: 0644] blob
c++/src/app/blast/Makefile.tblastx.app [new file with mode: 0644] blob
c++/src/app/blast/Makefile.update_blastdb [new file with mode: 0644] blob
c++/src/app/blast/Makefile.update_blastdb.app [new file with mode: 0644] blob
c++/src/app/blast/TODO.txt [new file with mode: 0644] blob
c++/src/app/blast/blast_app_util.cpp [new file with mode: 0644] blob
c++/src/app/blast/blast_app_util.hpp [new file with mode: 0644] blob
c++/src/app/blast/blast_formatter.cpp [new file with mode: 0644] blob
c++/src/app/blast/blast_report.cpp [new file with mode: 0755] blob
c++/src/app/blast/blast_report.ini [new file with mode: 0755] blob
c++/src/app/blast/blastn_app.cpp [new file with mode: 0644] blob
c++/src/app/blast/blastn_node.cpp [new file with mode: 0644] blob
c++/src/app/blast/blastn_node.hpp [new file with mode: 0644] blob
c++/src/app/blast/blastp_app.cpp [new file with mode: 0644] blob
c++/src/app/blast/blastp_node.cpp [new file with mode: 0644] blob
c++/src/app/blast/blastp_node.hpp [new file with mode: 0644] blob
c++/src/app/blast/blastx_app.cpp [new file with mode: 0644] blob
c++/src/app/blast/blastx_node.cpp [new file with mode: 0644] blob
c++/src/app/blast/blastx_node.hpp [new file with mode: 0644] blob
c++/src/app/blast/cleanup-blastdb-volumes.py [new file with mode: 0755] blob
c++/src/app/blast/deltablast_app.cpp [new file with mode: 0644] blob
c++/src/app/blast/get_species_taxids.sh [new file with mode: 0755] blob
c++/src/app/blast/legacy_blast.pl [new file with mode: 0755] blob
c++/src/app/blast/psiblast_app.cpp [new file with mode: 0644] blob
c++/src/app/blast/rpsblast_app.cpp [new file with mode: 0644] blob
c++/src/app/blast/rpsblast_node.cpp [new file with mode: 0644] blob
c++/src/app/blast/rpsblast_node.hpp [new file with mode: 0644] blob
c++/src/app/blast/rpstblastn_app.cpp [new file with mode: 0644] blob
c++/src/app/blast/rpstblastn_node.cpp [new file with mode: 0644] blob
c++/src/app/blast/rpstblastn_node.hpp [new file with mode: 0644] blob
c++/src/app/blast/seedtop_app.cpp [new file with mode: 0644] blob
c++/src/app/blast/tblastn_app.cpp [new file with mode: 0644] blob
c++/src/app/blast/tblastn_node.cpp [new file with mode: 0644] blob
c++/src/app/blast/tblastn_node.hpp [new file with mode: 0644] blob
c++/src/app/blast/tblastx_app.cpp [new file with mode: 0644] blob
c++/src/app/blast/update_blastdb.pl [new file with mode: 0755] blob
c++/src/app/blastdb/CMakeLists.blastdb_aliastool.app.txt [new file with mode: 0644] blob
c++/src/app/blastdb/CMakeLists.blastdb_convert.app.txt [new file with mode: 0644] blob
c++/src/app/blastdb/CMakeLists.blastdb_path.app.txt [new file with mode: 0644] blob
c++/src/app/blastdb/CMakeLists.blastdbcheck.app.txt [new file with mode: 0644] blob
c++/src/app/blastdb/CMakeLists.blastdbcmd.app.txt [new file with mode: 0644] blob
c++/src/app/blastdb/CMakeLists.blastdbcp.app.txt [new file with mode: 0644] blob
c++/src/app/blastdb/CMakeLists.convert2blastmask.app.txt [new file with mode: 0644] blob
c++/src/app/blastdb/CMakeLists.makeblastdb.app.txt [new file with mode: 0644] blob
c++/src/app/blastdb/CMakeLists.makeprofiledb.app.txt [new file with mode: 0644] blob
c++/src/app/blastdb/CMakeLists.txt [new file with mode: 0644] blob
c++/src/app/blastdb/Makefile.blastdb_aliastool.app [new file with mode: 0644] blob
c++/src/app/blastdb/Makefile.blastdb_convert.app [new file with mode: 0644] blob
c++/src/app/blastdb/Makefile.blastdb_path.app [new file with mode: 0755] blob
c++/src/app/blastdb/Makefile.blastdbcheck.app [new file with mode: 0644] blob
c++/src/app/blastdb/Makefile.blastdbcmd.app [new file with mode: 0644] blob
c++/src/app/blastdb/Makefile.blastdbcp.app [new file with mode: 0644] blob
c++/src/app/blastdb/Makefile.convert2blastmask.app [new file with mode: 0644] blob
c++/src/app/blastdb/Makefile.in [new file with mode: 0644] blob
c++/src/app/blastdb/Makefile.makeblastdb.app [new file with mode: 0644] blob
c++/src/app/blastdb/Makefile.makeprofiledb.app [new file with mode: 0644] blob
c++/src/app/blastdb/blastdb_aliastool.cpp [new file with mode: 0644] blob
c++/src/app/blastdb/blastdb_convert.cpp [new file with mode: 0644] blob
c++/src/app/blastdb/blastdb_path.cpp [new file with mode: 0755] blob
c++/src/app/blastdb/blastdbcheck.cpp [new file with mode: 0644] blob
c++/src/app/blastdb/blastdbcmd.cpp [new file with mode: 0644] blob
c++/src/app/blastdb/blastdbcp.cpp [new file with mode: 0644] blob
c++/src/app/blastdb/build_db_howto.txt [new file with mode: 0644] blob
c++/src/app/blastdb/convert2blastmask.cpp [new file with mode: 0644] blob
c++/src/app/blastdb/makeblastdb.cpp [new file with mode: 0644] blob
c++/src/app/blastdb/makeprofiledb.cpp [new file with mode: 0644] blob
c++/src/app/blastdb/masked_range_set.cpp [new file with mode: 0644] blob
c++/src/app/blastdb/masked_range_set.hpp [new file with mode: 0644] blob
c++/src/app/dustmasker/CMakeLists.dustmasker.app.txt [new file with mode: 0644] blob
c++/src/app/dustmasker/CMakeLists.txt [new file with mode: 0644] blob
c++/src/app/dustmasker/Makefile.dustmasker.app [new file with mode: 0644] blob
c++/src/app/dustmasker/Makefile.in [new file with mode: 0644] blob
c++/src/app/dustmasker/README [new file with mode: 0644] blob
c++/src/app/dustmasker/README.build [new file with mode: 0644] blob
c++/src/app/dustmasker/dust_mask_app.cpp [new file with mode: 0644] blob
c++/src/app/dustmasker/dust_mask_app.hpp [new file with mode: 0644] blob
c++/src/app/dustmasker/dustmasker.lst [new file with mode: 0644] blob
c++/src/app/dustmasker/main.cpp [new file with mode: 0644] blob
c++/src/app/segmasker/CMakeLists.segmasker.app.txt [new file with mode: 0644] blob
c++/src/app/segmasker/CMakeLists.txt [new file with mode: 0644] blob
c++/src/app/segmasker/Makefile.in [new file with mode: 0644] blob
c++/src/app/segmasker/Makefile.segmasker.app [new file with mode: 0644] blob
c++/src/app/segmasker/segmasker.cpp [new file with mode: 0644] blob
c++/src/app/winmasker/CMakeLists.txt [new file with mode: 0644] blob
c++/src/app/winmasker/CMakeLists.windowmasker_2.2.22_adapter.txt [new file with mode: 0644] blob
c++/src/app/winmasker/CMakeLists.winmasker.app.txt [new file with mode: 0644] blob
c++/src/app/winmasker/Makefile.in [new file with mode: 0644] blob
c++/src/app/winmasker/Makefile.windowmasker_2.2.22_adapter [new file with mode: 0644] blob
c++/src/app/winmasker/Makefile.winmasker.app [new file with mode: 0644] blob
c++/src/app/winmasker/README [new file with mode: 0644] blob
c++/src/app/winmasker/README.build [new file with mode: 0644] blob
c++/src/app/winmasker/main.cpp [new file with mode: 0644] blob
c++/src/app/winmasker/win_mask_app.cpp [new file with mode: 0644] blob
c++/src/app/winmasker/win_mask_app.hpp [new file with mode: 0644] blob
c++/src/app/winmasker/win_mask_sdust_masker.cpp [new file with mode: 0644] blob
c++/src/app/winmasker/win_mask_sdust_masker.hpp [new file with mode: 0644] blob
c++/src/app/winmasker/windowmasker.lst [new file with mode: 0644] blob
c++/src/app/winmasker/windowmasker_2.2.22_adapter.py [new file with mode: 0755] blob
c++/src/app/winmasker/windowmasker_counts_adapter.py [new file with mode: 0755] blob
c++/src/build-system/CMakeLists.txt [new file with mode: 0644] blob
c++/src/build-system/Makefile.app.in [new file with mode: 0644] blob
c++/src/build-system/Makefile.app.tmpl.in [new file with mode: 0644] blob
c++/src/build-system/Makefile.both.in [new file with mode: 0644] blob
c++/src/build-system/Makefile.compress_tests [new file with mode: 0644] blob
c++/src/build-system/Makefile.configurables [new file with mode: 0644] blob
c++/src/build-system/Makefile.configurables.null [new file with mode: 0644] blob
c++/src/build-system/Makefile.configurables.real [new file with mode: 0644] blob
c++/src/build-system/Makefile.dll.in [new file with mode: 0644] blob
c++/src/build-system/Makefile.flat_shims [new file with mode: 0644] blob
c++/src/build-system/Makefile.flat_tuneups [new file with mode: 0644] blob
c++/src/build-system/Makefile.in [new file with mode: 0644] blob
c++/src/build-system/Makefile.in.skel [new file with mode: 0644] blob
c++/src/build-system/Makefile.in.top [new file with mode: 0644] blob
c++/src/build-system/Makefile.is_dll_support.in [new file with mode: 0644] blob
c++/src/build-system/Makefile.is_gmake [new file with mode: 0644] blob
c++/src/build-system/Makefile.lib.in [new file with mode: 0644] blob
c++/src/build-system/Makefile.lib.tmpl.in [new file with mode: 0644] blob
c++/src/build-system/Makefile.meta.gmake=no [new file with mode: 0644] blob
c++/src/build-system/Makefile.meta.gmake=yes [new file with mode: 0644] blob
c++/src/build-system/Makefile.meta.in [new file with mode: 0644] blob
c++/src/build-system/Makefile.meta_f [new file with mode: 0644] blob
c++/src/build-system/Makefile.meta_l [new file with mode: 0644] blob
c++/src/build-system/Makefile.meta_p [new file with mode: 0644] blob
c++/src/build-system/Makefile.meta_r [new file with mode: 0644] blob
c++/src/build-system/Makefile.metal.in [new file with mode: 0644] blob
c++/src/build-system/Makefile.metal.tmpl.in [new file with mode: 0644] blob
c++/src/build-system/Makefile.mk.in [new file with mode: 0644] blob
c++/src/build-system/Makefile.mk.in.msvc [new file with mode: 0644] blob
c++/src/build-system/Makefile.mk.in.xcode [new file with mode: 0644] blob
c++/src/build-system/Makefile.module [new file with mode: 0644] blob
c++/src/build-system/Makefile.null.in [new file with mode: 0644] blob
c++/src/build-system/Makefile.protobuf.in [new file with mode: 0644] blob
c++/src/build-system/Makefile.requirements [new file with mode: 0644] blob
c++/src/build-system/Makefile.rules.in [new file with mode: 0644] blob
c++/src/build-system/Makefile.rules_with_autodep.in [new file with mode: 0644] blob
c++/src/build-system/Makefile.top_builddir.in [new file with mode: 0644] blob
c++/src/build-system/Makefile.xcode.tmpl [new file with mode: 0644] blob
c++/src/build-system/Makefile.xcode.top.tmpl [new file with mode: 0644] blob
c++/src/build-system/NEWS [new file with mode: 0644] blob
c++/src/build-system/aclocal.m4 [new file with mode: 0644] blob
c++/src/build-system/check.cfg.in [new file with mode: 0644] blob
c++/src/build-system/cmake/CMake.NCBIComponents.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/CMake.NCBIComponentsMSVC.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/CMake.NCBIComponentsUNIX.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/CMake.NCBIComponentsUNIXex.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/CMake.NCBIComponentsXCODE.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/CMake.NCBIptb.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/CMake.NCBIptb.ctest.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/CMake.NCBIptb.datatool.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/CMake.NCBIptb.grpc.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/CMake.NCBIptb.install.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/CMake.NCBIptb.legacy.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/CMake.NCBIptb.ncbi.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/CMake.NCBIptb.ntest.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/CMake.NCBItoolkit.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/CMakeChecks.BerkeleyDB.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/CMakeChecks.basic-checks.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/CMakeChecks.boost.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/CMakeChecks.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/CMakeChecks.compiler.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/CMakeChecks.compress.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/CMakeChecks.final-message.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/CMakeChecks.image.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/CMakeChecks.os.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/CMakeChecks.pcre.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/CMakeChecks.sqlite3.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/CMakeChecks.wxwidgets.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/CMakeLists.top_builddir.txt [new file with mode: 0644] blob
c++/src/build-system/cmake/CMakeMacros.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/FindBerkeleyDB.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/FindExternalLibrary.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/FindFTGL.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/FindLZO.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/FindMongoCXX.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/FindMysql.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/FindOSMesa.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/FindPCRE.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/FindSKESA.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/FindSqlite3.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/FindZooKeeper.cmake [new file with mode: 0755] blob
c++/src/build-system/cmake/FindwxWidgets.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/HunterGate.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/NCBI-ToolkitConfig.cmake.in [new file with mode: 0644] blob
c++/src/build-system/cmake/Sqlite3Config.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/TestDriver.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/cmClang.sh [new file with mode: 0755] blob
c++/src/build-system/cmake/cmGCC.sh [new file with mode: 0755] blob
c++/src/build-system/cmake/cmICC.sh [new file with mode: 0755] blob
c++/src/build-system/cmake/cmLLVM-GCC.sh [new file with mode: 0755] blob
c++/src/build-system/cmake/cmake-cfg-unix.sh [new file with mode: 0755] blob
c++/src/build-system/cmake/cmake-cfg-vs.bat [new file with mode: 0644] blob
c++/src/build-system/cmake/cmake-cfg-xcode.sh [new file with mode: 0755] blob
c++/src/build-system/cmake/cmake-configure [new file with mode: 0755] blob
c++/src/build-system/cmake/cmake_configure_ext_gpipe.sh [new file with mode: 0755] blob
c++/src/build-system/cmake/cmake_configure_ext_tmpl.bat [new file with mode: 0644] blob
c++/src/build-system/cmake/cmake_configure_ext_tmpl.sh [new file with mode: 0644] blob
c++/src/build-system/cmake/config.cmake.h.in [new file with mode: 0644] blob
c++/src/build-system/cmake/configure-custom.sh [new file with mode: 0755] blob
c++/src/build-system/cmake/dll_main.cpp [new file with mode: 0644] blob
c++/src/build-system/cmake/generate_dependencies.sh [new file with mode: 0755] blob
c++/src/build-system/cmake/ncbi-defaults/ncbi-berkeleydb-config.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/ncbi-defaults/ncbi-ftgl-config.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/ncbi-defaults/ncbi-glew-config.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/ncbi-defaults/ncbi-gnutls-config.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/ncbi-defaults/ncbi-leveldb-config.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/ncbi-defaults/ncbi-libxml2-config.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/ncbi-defaults/ncbi-libxslt-config.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/ncbi-defaults/ncbi-lzo-config.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/ncbi-defaults/ncbi-mongocxx-config.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/ncbi-defaults/ncbi-opengl-config.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/ncbi-defaults/ncbi-osmesa-config.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/ncbi-defaults/ncbi-sqlite3-config.cmake [new file with mode: 0644] blob
c++/src/build-system/cmake/ncbi.rc [new file with mode: 0644] blob
c++/src/build-system/cmake/ncbi_cpp.cfg.props [new file with mode: 0644] blob
c++/src/build-system/cmake/ncbiconf_msvc_site.h.in [new file with mode: 0644] blob
c++/src/build-system/cmake/ncbilogo.ico [new file with mode: 0644] blob
c++/src/build-system/cmake/winmain.cpp [new file with mode: 0644] blob
c++/src/build-system/config.guess [new file with mode: 0755] blob
c++/src/build-system/config.h.in [new file with mode: 0644] blob
c++/src/build-system/config.site [new file with mode: 0644] blob
c++/src/build-system/config.site.ex [new file with mode: 0644] blob
c++/src/build-system/config.sub [new file with mode: 0755] blob
c++/src/build-system/configure [new file with mode: 0755] blob
c++/src/build-system/configure.ac [new file with mode: 0644] blob
c++/src/build-system/datatool_version.txt [new file with mode: 0644] blob
c++/src/build-system/helpers/Makefile.in [new file with mode: 0644] blob
c++/src/build-system/helpers/Makefile.run_with_lock.app [new file with mode: 0644] blob
c++/src/build-system/helpers/run_with_lock.c [new file with mode: 0644] blob
c++/src/build-system/install-sh [new file with mode: 0755] blob
c++/src/build-system/install.sh.in [new file with mode: 0644] blob
c++/src/build-system/library_relations.txt [new file with mode: 0644] blob
c++/src/build-system/m4/ax_check_gnu_make.m4 [new file with mode: 0644] blob
c++/src/build-system/m4/ax_jni_include_dir.m4 [new file with mode: 0644] blob
c++/src/build-system/m4/ax_prog_cc_for_build.m4 [new file with mode: 0644] blob
c++/src/build-system/ncbi_package [new file with mode: 0644] blob
c++/src/build-system/ncbi_package_name [new file with mode: 0644] blob
c++/src/build-system/ncbi_package_version [new file with mode: 0644] blob
c++/src/build-system/new_module.sh.in [new file with mode: 0644] blob
c++/src/build-system/project_tags.txt [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder.ini [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/CMakeLists.project_tree_builder.app.txt [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/CMakeLists.txt [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/Makefile.in [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/Makefile.msvc71 [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/Makefile.project_tree_builder.app [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/Makefile.project_tree_builder.app.msvc [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/Makefile.project_tree_builder.app.xcode [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/configurable_file.cpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/configurable_file.hpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/file_contents.cpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/file_contents.hpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/mac_prj_generator.cpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/mac_prj_generator.hpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msbuild/CMakeLists.msbuild_dataobj.lib.txt [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msbuild/CMakeLists.txt [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msbuild/Makefile.in [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msbuild/Makefile.msbuild_dataobj.lib [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msbuild/Makefile.msbuild_dataobj.lib.msvc [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msbuild/Microsoft.Build.Commontypes.xsd [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msbuild/Microsoft.Build.Core.xsd [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msbuild/msbuild_dataobj.def [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msbuild/msbuild_dataobj.xsd [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msbuild/msbuild_dataobj_core.xsd [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msvc71_project.def [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msvc71_project.dtd [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msvc71_project.module [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msvc_configure.cpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msvc_configure.hpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msvc_configure_prj_generator.cpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msvc_configure_prj_generator.hpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msvc_dlls_info.cpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msvc_dlls_info.hpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msvc_dlls_info_utils.hpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msvc_makefile.cpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msvc_makefile.hpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msvc_masterproject_generator.cpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msvc_masterproject_generator.hpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msvc_prj_defines.hpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msvc_prj_files_collector.cpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msvc_prj_files_collector.hpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msvc_prj_generator.cpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msvc_prj_generator.hpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msvc_prj_utils.cpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msvc_project_context.cpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msvc_project_context.hpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msvc_site.cpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msvc_site.hpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msvc_sln_generator.cpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msvc_sln_generator.hpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msvc_tools_implement.hpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/msvc_traits.hpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/ncbilogo.ico [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/prj_file_collector.cpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/prj_file_collector.hpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/proj_builder_app.cpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/proj_builder_app.hpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/proj_datatool_generated_src.cpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/proj_datatool_generated_src.hpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/proj_item.cpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/proj_item.hpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/proj_projects.cpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/proj_projects.hpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/proj_src_resolver.cpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/proj_src_resolver.hpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/proj_tree.cpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/proj_tree.hpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/proj_tree_builder.cpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/proj_tree_builder.hpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/proj_utils.cpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/proj_utils.hpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/property_list.xsd [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/ptb_err_codes.hpp [new file with mode: 0755] blob
c++/src/build-system/project_tree_builder/ptb_gui.cpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/ptb_gui.h [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/ptb_gui.rc [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/ptb_registry.cpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/ptb_registry.hpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/resolver.cpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/resolver.hpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder/stl_msvc_usage.hpp [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder_gui/manifest.mf [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder_gui/nbproject/build-impl.xml [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder_gui/nbproject/genfiles.properties [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder_gui/nbproject/private/config.properties [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder_gui/nbproject/private/private.properties [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder_gui/nbproject/private/private.xml [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder_gui/nbproject/project.properties [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder_gui/nbproject/project.xml [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder_gui/src/ptbgui/ArgsParser.java [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder_gui/src/ptbgui/CheckListMouseAdapter.java [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder_gui/src/ptbgui/CheckListRenderer.java [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder_gui/src/ptbgui/KTagsDialog.form [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder_gui/src/ptbgui/KTagsDialog.java [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder_gui/src/ptbgui/PtbguiMain.form [new file with mode: 0644] blob
c++/src/build-system/project_tree_builder_gui/src/ptbgui/PtbguiMain.java [new file with mode: 0644] blob
c++/src/build-system/ptb_version.txt [new file with mode: 0644] blob
c++/src/build-system/reconfigure.sh.in [new file with mode: 0644] blob
c++/src/build-system/relocate.sh.in [new file with mode: 0644] blob
c++/src/build-system/run_sybase_app.sh.in [new file with mode: 0644] blob
c++/src/build-system/run_with_cd_reporter.py.in [new file with mode: 0644] blob
c++/src/build-system/sysdep.sh.in [new file with mode: 0644] blob
c++/src/cgi/CMakeLists.cgi.lib.txt [new file with mode: 0644] blob
c++/src/cgi/CMakeLists.fcgi.lib.txt [new file with mode: 0644] blob
c++/src/cgi/CMakeLists.txt [new file with mode: 0644] blob
c++/src/cgi/Makefile.cgi.lib [new file with mode: 0644] blob
c++/src/cgi/Makefile.fcgi.lib [new file with mode: 0644] blob
c++/src/cgi/Makefile.in [new file with mode: 0644] blob
c++/src/cgi/cgi_entry_reader.cpp [new file with mode: 0644] blob
c++/src/cgi/cgi_exception.cpp [new file with mode: 0644] blob
c++/src/cgi/cgi_run.cpp [new file with mode: 0644] blob
c++/src/cgi/cgi_serial.cpp [new file with mode: 0644] blob
c++/src/cgi/cgi_session.cpp [new file with mode: 0644] blob
c++/src/cgi/cgi_util.cpp [new file with mode: 0644] blob
c++/src/cgi/cgiapp.cpp [new file with mode: 0644] blob
c++/src/cgi/cgiapp_cached.cpp [new file with mode: 0644] blob
c++/src/cgi/cgictx.cpp [new file with mode: 0644] blob
c++/src/cgi/fcgi_run.cpp [new file with mode: 0644] blob
c++/src/cgi/fcgibuf.cpp [new file with mode: 0644] blob
c++/src/cgi/fcgibuf.hpp [new file with mode: 0644] blob
c++/src/cgi/ncbicgi.cpp [new file with mode: 0644] blob
c++/src/cgi/ncbicgir.cpp [new file with mode: 0644] blob
c++/src/cgi/ncbires.cpp [new file with mode: 0644] blob
c++/src/cgi/ref_args.cpp [new file with mode: 0644] blob
c++/src/cgi/user_agent.cpp [new file with mode: 0644] blob
c++/src/connect/CMakeLists.connect.lib.txt [new file with mode: 0644] blob
c++/src/connect/CMakeLists.connssl.lib.txt [new file with mode: 0644] blob
c++/src/connect/CMakeLists.txt [new file with mode: 0644] blob
c++/src/connect/CMakeLists.xconnect.lib.txt [new file with mode: 0644] blob
c++/src/connect/CMakeLists.xthrserv.lib.txt [new file with mode: 0644] blob
c++/src/connect/CMakeLists.xxconnect.lib.txt [new file with mode: 0644] blob
c++/src/connect/CMakeLists.xxconnect2.lib.txt [new file with mode: 0644] blob
c++/src/connect/Makefile.connect.lib [new file with mode: 0644] blob
c++/src/connect/Makefile.connect.lib.msvc [new file with mode: 0644] blob
c++/src/connect/Makefile.connect.lib.unix [new file with mode: 0644] blob
c++/src/connect/Makefile.connssl.lib [new file with mode: 0644] blob
c++/src/connect/Makefile.connssl.lib.msvc [new file with mode: 0644] blob
c++/src/connect/Makefile.connssl.lib.unix [new file with mode: 0644] blob
c++/src/connect/Makefile.in [new file with mode: 0644] blob
c++/src/connect/Makefile.xconnect.lib [new file with mode: 0644] blob
c++/src/connect/Makefile.xconnect.lib.msvc [new file with mode: 0644] blob
c++/src/connect/Makefile.xconnect.lib.unix [new file with mode: 0644] blob
c++/src/connect/Makefile.xthrserv.lib [new file with mode: 0644] blob
c++/src/connect/Makefile.xthrserv.lib.msvc [new file with mode: 0644] blob
c++/src/connect/Makefile.xxconnect.lib [new file with mode: 0644] blob
c++/src/connect/Makefile.xxconnect.lib.msvc [new file with mode: 0644] blob
c++/src/connect/Makefile.xxconnect.lib.unix [new file with mode: 0644] blob
c++/src/connect/Makefile.xxconnect2.lib [new file with mode: 0644] blob
c++/src/connect/Makefile.xxconnect2.mk [new file with mode: 0644] blob
c++/src/connect/_pch.cpp [new file with mode: 0644] blob
c++/src/connect/connect_misc.cpp [new file with mode: 0644] blob
c++/src/connect/connect_misc_impl.hpp [new file with mode: 0644] blob
c++/src/connect/connection_pool.cpp [new file with mode: 0644] blob
c++/src/connect/connection_pool.hpp [new file with mode: 0644] blob
c++/src/connect/email_diag_handler.cpp [new file with mode: 0644] blob
c++/src/connect/mbedtls/aes.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/aesni.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/apache-2.0.txt [new file with mode: 0644] blob
c++/src/connect/mbedtls/arc4.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/asn1parse.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/asn1write.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/base64.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/bignum.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/blowfish.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/camellia.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/ccm.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/certs.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/cipher.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/cipher_wrap.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/cmac.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/ctr_drbg.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/debug.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/des.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/dhm.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/ecdh.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/ecdsa.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/ecjpake.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/ecp.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/ecp_curves.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/entropy.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/entropy_poll.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/error.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/gcm.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/gpl-2.0.txt [new file with mode: 0644] blob
c++/src/connect/mbedtls/havege.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/hmac_drbg.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/aes.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/aesni.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/arc4.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/asn1.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/asn1write.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/base64.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/bignum.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/blowfish.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/bn_mul.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/camellia.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/ccm.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/certs.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/check_config.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/cipher.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/cipher_internal.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/cmac.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/compat-1.3.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/config.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/ctr_drbg.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/debug.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/des.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/dhm.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/ecdh.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/ecdsa.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/ecjpake.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/ecp.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/ecp_internal.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/entropy.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/entropy_poll.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/error.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/gcm.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/havege.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/hmac_drbg.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/md.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/md2.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/md4.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/md5.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/md_internal.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/memory_buffer_alloc.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/ncbicxx_rename_mbedtls.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/net.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/net_sockets.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/oid.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/padlock.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/pem.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/pk.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/pk_internal.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/pkcs11.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/pkcs12.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/pkcs5.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/platform.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/platform_time.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/ripemd160.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/rsa.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/rsa_internal.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/sha1.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/sha256.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/sha512.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/ssl.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/ssl_cache.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/ssl_ciphersuites.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/ssl_cookie.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/ssl_internal.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/ssl_ticket.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/threading.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/threading_alt.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/timing.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/version.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/x509.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/x509_crl.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/x509_crt.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/x509_csr.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls/xtea.h [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls_md5.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/mbedtls_version.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/md.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/md2.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/md4.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/md_wrap.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/memory_buffer_alloc.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/net_sockets.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/oid.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/padlock.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/pem.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/pk.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/pk_wrap.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/pkcs11.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/pkcs12.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/pkcs5.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/pkparse.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/pkwrite.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/platform.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/ripemd160.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/rsa.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/rsa_internal.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/sha1.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/sha256.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/sha512.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/ssl_cache.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/ssl_ciphersuites.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/ssl_cli.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/ssl_cookie.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/ssl_srv.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/ssl_ticket.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/ssl_tls.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/threading.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/timing.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/version_features.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/x509.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/x509_create.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/x509_crl.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/x509_crt.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/x509_csr.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/x509write_crt.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/x509write_csr.c [new file with mode: 0644] blob
c++/src/connect/mbedtls/xtea.c [new file with mode: 0644] blob
c++/src/connect/ncbi_ansi_ext.c [new file with mode: 0644] blob
c++/src/connect/ncbi_ansi_ext.h [new file with mode: 0644] blob
c++/src/connect/ncbi_assert.h [new file with mode: 0644] blob
c++/src/connect/ncbi_base64.c [new file with mode: 0644] blob
c++/src/connect/ncbi_base64.h [new file with mode: 0644] blob
c++/src/connect/ncbi_blowfish.c [new file with mode: 0644] blob
c++/src/connect/ncbi_buffer.c [new file with mode: 0644] blob
c++/src/connect/ncbi_comm.h [new file with mode: 0644] blob
c++/src/connect/ncbi_config.h [new file with mode: 0644] blob
c++/src/connect/ncbi_conn_reader_writer.cpp [new file with mode: 0644] blob
c++/src/connect/ncbi_conn_stream.cpp [new file with mode: 0644] blob
c++/src/connect/ncbi_conn_streambuf.cpp [new file with mode: 0644] blob
c++/src/connect/ncbi_conn_streambuf.hpp [new file with mode: 0644] blob
c++/src/connect/ncbi_conn_test.cpp [new file with mode: 0644] blob
c++/src/connect/ncbi_connection.c [new file with mode: 0644] blob
c++/src/connect/ncbi_connector.c [new file with mode: 0644] blob
c++/src/connect/ncbi_connssl.h [new file with mode: 0644] blob
c++/src/connect/ncbi_connutil.c [new file with mode: 0644] blob
c++/src/connect/ncbi_core.c [new file with mode: 0644] blob
c++/src/connect/ncbi_core_cxx.cpp [new file with mode: 0644] blob
c++/src/connect/ncbi_dispd.c [new file with mode: 0644] blob
c++/src/connect/ncbi_dispd.h [new file with mode: 0644] blob
c++/src/connect/ncbi_file_connector.c [new file with mode: 0644] blob
c++/src/connect/ncbi_ftp_connector.c [new file with mode: 0644] blob
c++/src/connect/ncbi_gnutls.c [new file with mode: 0644] blob
c++/src/connect/ncbi_heapmgr.c [new file with mode: 0644] blob
c++/src/connect/ncbi_host_info.c [new file with mode: 0644] blob
c++/src/connect/ncbi_host_infop.h [new file with mode: 0644] blob
c++/src/connect/ncbi_http2_session.cpp [new file with mode: 0644] blob
c++/src/connect/ncbi_http2_session_impl.hpp [new file with mode: 0644] blob
c++/src/connect/ncbi_http_connector.c [new file with mode: 0644] blob
c++/src/connect/ncbi_http_session.cpp [new file with mode: 0644] blob
c++/src/connect/ncbi_iprange.c [new file with mode: 0644] blob
c++/src/connect/ncbi_ipv6.c [new file with mode: 0644] blob
c++/src/connect/ncbi_lb.c [new file with mode: 0644] blob
c++/src/connect/ncbi_lb.h [new file with mode: 0644] blob
c++/src/connect/ncbi_lbos.c [new file with mode: 0644] blob
c++/src/connect/ncbi_lbos.h [new file with mode: 0644] blob
c++/src/connect/ncbi_lbos_cxx.cpp [new file with mode: 0644] blob
c++/src/connect/ncbi_lbosp.h [new file with mode: 0644] blob
c++/src/connect/ncbi_lbosp.hpp [new file with mode: 0644] blob
c++/src/connect/ncbi_lbsmd.h [new file with mode: 0644] blob
c++/src/connect/ncbi_lbsmd_stub.c [new file with mode: 0644] blob
c++/src/connect/ncbi_linkerd.c [new file with mode: 0644] blob
c++/src/connect/ncbi_linkerd.h [new file with mode: 0644] blob
c++/src/connect/ncbi_local.c [new file with mode: 0644] blob
c++/src/connect/ncbi_local.h [new file with mode: 0644] blob
c++/src/connect/ncbi_localip.c [new file with mode: 0644] blob
c++/src/connect/ncbi_localip_cxx.cpp [new file with mode: 0644] blob
c++/src/connect/ncbi_mbedtls.c [new file with mode: 0644] blob
c++/src/connect/ncbi_memory_connector.c [new file with mode: 0644] blob
c++/src/connect/ncbi_misc.cpp [new file with mode: 0644] blob
c++/src/connect/ncbi_monkey.cpp [new file with mode: 0644] blob
c++/src/connect/ncbi_monkeyp.hpp [new file with mode: 0644] blob
c++/src/connect/ncbi_namedpipe.cpp [new file with mode: 0644] blob
c++/src/connect/ncbi_namedpipe_connector.cpp [new file with mode: 0644] blob
c++/src/connect/ncbi_namerd.c [new file with mode: 0644] blob
c++/src/connect/ncbi_namerd.h [new file with mode: 0644] blob
c++/src/connect/ncbi_once.h [new file with mode: 0644] blob
c++/src/connect/ncbi_pipe.cpp [new file with mode: 0644] blob
c++/src/connect/ncbi_pipe_connector.cpp [new file with mode: 0644] blob
c++/src/connect/ncbi_priv.c [new file with mode: 0644] blob
c++/src/connect/ncbi_priv.h [new file with mode: 0644] blob
c++/src/connect/ncbi_sendmail.c [new file with mode: 0644] blob
c++/src/connect/ncbi_server_info.c [new file with mode: 0644] blob
c++/src/connect/ncbi_server_infop.h [new file with mode: 0644] blob
c++/src/connect/ncbi_service.c [new file with mode: 0644] blob
c++/src/connect/ncbi_service_connector.c [new file with mode: 0644] blob
c++/src/connect/ncbi_service_cxx.cpp [new file with mode: 0644] blob
c++/src/connect/ncbi_servicep.h [new file with mode: 0644] blob
c++/src/connect/ncbi_socket.c [new file with mode: 0644] blob
c++/src/connect/ncbi_socket_connector.c [new file with mode: 0644] blob
c++/src/connect/ncbi_socket_cxx.cpp [new file with mode: 0644] blob
c++/src/connect/ncbi_socketp.h [new file with mode: 0644] blob
c++/src/connect/ncbi_strerror.c [new file with mode: 0644] blob
c++/src/connect/ncbi_tls.c [new file with mode: 0644] blob
c++/src/connect/ncbi_types.c [new file with mode: 0644] blob
c++/src/connect/ncbi_usage_report.cpp [new file with mode: 0644] blob
c++/src/connect/ncbi_userhost.cpp [new file with mode: 0644] blob
c++/src/connect/ncbi_util.c [new file with mode: 0644] blob
c++/src/connect/ncbi_uv_nghttp2.cpp [new file with mode: 0644] blob
c++/src/connect/ncbi_version.c [new file with mode: 0644] blob
c++/src/connect/ncbi_version.h [new file with mode: 0644] blob
c++/src/connect/parson.c [new file with mode: 0644] blob
c++/src/connect/parson.h [new file with mode: 0644] blob
c++/src/connect/server.cpp [new file with mode: 0644] blob
c++/src/connect/server_monitor.cpp [new file with mode: 0644] blob
c++/src/connect/services/CMakeLists.ncbi_xblobstorage_netcache.lib.txt [new file with mode: 0644] blob
c++/src/connect/services/CMakeLists.ncbi_xcache_netcache.lib.txt [new file with mode: 0644] blob
c++/src/connect/services/CMakeLists.txt [new file with mode: 0644] blob
c++/src/connect/services/CMakeLists.xconnserv.lib.txt [new file with mode: 0644] blob
c++/src/connect/services/Makefile.in [new file with mode: 0644] blob
c++/src/connect/services/Makefile.ncbi_xblobstorage_netcache.lib [new file with mode: 0644] blob
c++/src/connect/services/Makefile.ncbi_xcache_netcache.lib [new file with mode: 0644] blob
c++/src/connect/services/Makefile.xconnserv.lib [new file with mode: 0644] blob
c++/src/connect/services/_ncbi_clparser_completion.sh [new file with mode: 0644] blob
c++/src/connect/services/_ncbi_clparser_opt_compl.sh [new file with mode: 0755] blob
c++/src/connect/services/balancing.hpp [new file with mode: 0644] blob
c++/src/connect/services/blob_storage_netcache.cpp [new file with mode: 0644] blob
c++/src/connect/services/clparser.cpp [new file with mode: 0644] blob
c++/src/connect/services/compound_id.cpp [new file with mode: 0644] blob
c++/src/connect/services/compound_id_impl.hpp [new file with mode: 0644] blob
c++/src/connect/services/compound_id_v0.cpp [new file with mode: 0644] blob
c++/src/connect/services/grid_client.cpp [new file with mode: 0644] blob
c++/src/connect/services/grid_client_app.cpp [new file with mode: 0644] blob
c++/src/connect/services/grid_control_thread.cpp [new file with mode: 0644] blob
c++/src/connect/services/grid_control_thread.hpp [new file with mode: 0644] blob
c++/src/connect/services/grid_globals.cpp [new file with mode: 0644] blob
c++/src/connect/services/grid_rw_impl.cpp [new file with mode: 0644] blob
c++/src/connect/services/grid_worker.cpp [new file with mode: 0644] blob
c++/src/connect/services/grid_worker_app.cpp [new file with mode: 0644] blob
c++/src/connect/services/grid_worker_impl.hpp [new file with mode: 0644] blob
c++/src/connect/services/json_over_uttp.cpp [new file with mode: 0644] blob
c++/src/connect/services/netcache_api.cpp [new file with mode: 0644] blob
c++/src/connect/services/netcache_api_admin.cpp [new file with mode: 0644] blob
c++/src/connect/services/netcache_api_impl.hpp [new file with mode: 0644] blob
c++/src/connect/services/netcache_key.cpp [new file with mode: 0644] blob
c++/src/connect/services/netcache_params.cpp [new file with mode: 0644] blob
c++/src/connect/services/netcache_params.hpp [new file with mode: 0644] blob
c++/src/connect/services/netcache_rw.cpp [new file with mode: 0644] blob
c++/src/connect/services/netcache_rw.hpp [new file with mode: 0644] blob
c++/src/connect/services/netcache_search.cpp [new file with mode: 0644] blob
c++/src/connect/services/neticache_client.cpp [new file with mode: 0644] blob
c++/src/connect/services/netschedule_api.cpp [new file with mode: 0644] blob
c++/src/connect/services/netschedule_api_admin.cpp [new file with mode: 0644] blob
c++/src/connect/services/netschedule_api_executor.cpp [new file with mode: 0644] blob
c++/src/connect/services/netschedule_api_expt.cpp [new file with mode: 0644] blob
c++/src/connect/services/netschedule_api_getjob.cpp [new file with mode: 0644] blob
c++/src/connect/services/netschedule_api_getjob.hpp [new file with mode: 0644] blob
c++/src/connect/services/netschedule_api_impl.hpp [new file with mode: 0644] blob
c++/src/connect/services/netschedule_api_reader.cpp [new file with mode: 0644] blob
c++/src/connect/services/netschedule_api_submitter.cpp [new file with mode: 0644] blob
c++/src/connect/services/netschedule_api_wn_info.cpp [new file with mode: 0644] blob
c++/src/connect/services/netschedule_key.cpp [new file with mode: 0644] blob
c++/src/connect/services/netservice_api.cpp [new file with mode: 0644] blob
c++/src/connect/services/netservice_api_impl.hpp [new file with mode: 0644] blob
c++/src/connect/services/netservice_params.cpp [new file with mode: 0644] blob
c++/src/connect/services/netservice_params.hpp [new file with mode: 0644] blob
c++/src/connect/services/netservice_protocol_parser.cpp [new file with mode: 0644] blob
c++/src/connect/services/netstorage.cpp [new file with mode: 0644] blob
c++/src/connect/services/netstorage_direct_nc.cpp [new file with mode: 0644] blob
c++/src/connect/services/netstorage_direct_nc.hpp [new file with mode: 0644] blob
c++/src/connect/services/netstorage_rpc.cpp [new file with mode: 0644] blob
c++/src/connect/services/netstorage_rpc.hpp [new file with mode: 0644] blob
c++/src/connect/services/netstorageobjectinfo.cpp [new file with mode: 0644] blob
c++/src/connect/services/netstorageobjectloc.cpp [new file with mode: 0644] blob
c++/src/connect/services/ns_client_factory.cpp [new file with mode: 0644] blob
c++/src/connect/services/ns_job_serializer.cpp [new file with mode: 0644] blob
c++/src/connect/services/ns_output_parser.cpp [new file with mode: 0644] blob
c++/src/connect/services/remote_app.cpp [new file with mode: 0644] blob
c++/src/connect/services/srv_connections.cpp [new file with mode: 0644] blob
c++/src/connect/services/srv_connections_impl.hpp [new file with mode: 0644] blob
c++/src/connect/services/util.cpp [new file with mode: 0644] blob
c++/src/connect/services/wn_cleanup.cpp [new file with mode: 0644] blob
c++/src/connect/services/wn_cleanup.hpp [new file with mode: 0644] blob
c++/src/connect/services/wn_commit_thread.cpp [new file with mode: 0644] blob
c++/src/connect/services/wn_commit_thread.hpp [new file with mode: 0644] blob
c++/src/connect/services/wn_main_loop.cpp [new file with mode: 0644] blob
c++/src/connect/services/wn_offline_mode.cpp [new file with mode: 0644] blob
c++/src/connect/threaded_server.cpp [new file with mode: 0644] blob
c++/src/corelib/CMakeLists.corelib.lib.txt [new file with mode: 0644] blob
c++/src/corelib/CMakeLists.test_boost.lib.txt [new file with mode: 0644] blob
c++/src/corelib/CMakeLists.test_mt.lib.txt [new file with mode: 0644] blob
c++/src/corelib/CMakeLists.txt [new file with mode: 0644] blob
c++/src/corelib/Makefile.corelib.lib [new file with mode: 0644] blob
c++/src/corelib/Makefile.corelib.lib.msvc [new file with mode: 0644] blob
c++/src/corelib/Makefile.corelib.lib.xcode [new file with mode: 0644] blob
c++/src/corelib/Makefile.in [new file with mode: 0644] blob
c++/src/corelib/Makefile.ncbi_java.dll.msvc [new file with mode: 0644] blob
c++/src/corelib/Makefile.ncbi_java.lib [new file with mode: 0644] blob
c++/src/corelib/Makefile.precompile.in [new file with mode: 0644] blob
c++/src/corelib/Makefile.test_boost.lib [new file with mode: 0644] blob
c++/src/corelib/Makefile.test_boost.lib.msvc [new file with mode: 0644] blob
c++/src/corelib/Makefile.test_mt.lib [new file with mode: 0644] blob
c++/src/corelib/Makefile.test_mt.lib.msvc [new file with mode: 0644] blob
c++/src/corelib/blob_storage.cpp [new file with mode: 0644] blob
c++/src/corelib/ddumpable.cpp [new file with mode: 0644] blob
c++/src/corelib/env_reg.cpp [new file with mode: 0644] blob
c++/src/corelib/expr.cpp [new file with mode: 0644] blob
c++/src/corelib/guard.cpp [new file with mode: 0644] blob
c++/src/corelib/interprocess_lock.cpp [new file with mode: 0644] blob
c++/src/corelib/metareg.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbi_application.xsd [new file with mode: 0644] blob
c++/src/corelib/ncbi_autoinit.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbi_base64.c [new file with mode: 0644] blob
c++/src/corelib/ncbi_base64.h [new file with mode: 0644] blob
c++/src/corelib/ncbi_config.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbi_cookies.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbi_dbsvcmapper.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbi_fast.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbi_java.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbi_message.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbi_os_mswin.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbi_os_mswin_p.hpp [new file with mode: 0644] blob
c++/src/corelib/ncbi_os_unix.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbi_os_unix_p.hpp [new file with mode: 0644] blob
c++/src/corelib/ncbi_param.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbi_pool_balancer.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbi_process.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbi_safe_static.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbi_signal.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbi_stack.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbi_stack_default.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbi_stack_libbackward.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbi_stack_libunwind.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbi_stack_linux.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbi_stack_solaris.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbi_stack_win32.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbi_stack_win64.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbi_strings.c [new file with mode: 0644] blob
c++/src/corelib/ncbi_system.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbi_toolkit.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbi_url.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbi_version.xsd [new file with mode: 0644] blob
c++/src/corelib/ncbiapp.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbiargs.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbiargs_p.hpp [new file with mode: 0644] blob
c++/src/corelib/ncbiatomic.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbiatomic_workshop.c [new file with mode: 0644] blob
c++/src/corelib/ncbicfg.c.in [new file with mode: 0644] blob
c++/src/corelib/ncbicntr_workshop.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbicntr_workshop.il [new file with mode: 0644] blob
c++/src/corelib/ncbidbg.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbidbg_p.hpp [new file with mode: 0644] blob
c++/src/corelib/ncbidiag.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbidiag_p.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbidiag_p.hpp [new file with mode: 0644] blob
c++/src/corelib/ncbidll.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbienv.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbierror.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbiexec.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbiexpt.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbifile.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbimempool.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbimtx.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbiobj.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbireg.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbistr.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbistre.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbisys.hpp [new file with mode: 0644] blob
c++/src/corelib/ncbithr.cpp [new file with mode: 0644] blob
c++/src/corelib/ncbitime.cpp [new file with mode: 0644] blob
c++/src/corelib/obj_store.cpp [new file with mode: 0644] blob
c++/src/corelib/perf_log.cpp [new file with mode: 0644] blob
c++/src/corelib/plugin_manager.cpp [new file with mode: 0644] blob
c++/src/corelib/plugin_manager_store.cpp [new file with mode: 0644] blob
c++/src/corelib/request_control.cpp [new file with mode: 0644] blob
c++/src/corelib/request_ctx.cpp [new file with mode: 0644] blob
c++/src/corelib/request_status.cpp [new file with mode: 0644] blob
c++/src/corelib/resource_info.cpp [new file with mode: 0644] blob
c++/src/corelib/rwstreambuf.cpp [new file with mode: 0644] blob
c++/src/corelib/stream_utils.cpp [new file with mode: 0644] blob
c++/src/corelib/syslog.cpp [new file with mode: 0644] blob
c++/src/corelib/teamcity_boost.cpp [new file with mode: 0644] blob
c++/src/corelib/teamcity_messages.cpp [new file with mode: 0644] blob
c++/src/corelib/test_boost.cpp [new file with mode: 0644] blob
c++/src/corelib/test_mt.cpp [new file with mode: 0644] blob
c++/src/corelib/version.cpp [new file with mode: 0644] blob
c++/src/db/CMakeLists.txt [new file with mode: 0644] blob
c++/src/db/Makefile.in [new file with mode: 0644] blob
c++/src/db/sqlite/CMakeLists.sqlitewrapp.lib.txt [new file with mode: 0644] blob
c++/src/db/sqlite/CMakeLists.txt [new file with mode: 0644] blob
c++/src/db/sqlite/Makefile.in [new file with mode: 0644] blob
c++/src/db/sqlite/Makefile.sqlitewrapp.lib [new file with mode: 0644] blob
c++/src/db/sqlite/sqlitewrapp.cpp [new file with mode: 0644] blob
c++/src/dbapi/CMakeLists.dbapi.lib.txt [new file with mode: 0644] blob
c++/src/dbapi/CMakeLists.txt [new file with mode: 0644] blob
c++/src/dbapi/Makefile.dbapi.lib [new file with mode: 0644] blob
c++/src/dbapi/Makefile.in [new file with mode: 0644] blob
c++/src/dbapi/active_obj.cpp [new file with mode: 0644] blob
c++/src/dbapi/active_obj.hpp [new file with mode: 0644] blob
c++/src/dbapi/blobstream.cpp [new file with mode: 0644] blob
c++/src/dbapi/blobstream.hpp [new file with mode: 0644] blob
c++/src/dbapi/bulkinsert.cpp [new file with mode: 0644] blob
c++/src/dbapi/bulkinsert.hpp [new file with mode: 0644] blob
c++/src/dbapi/bytestreambuf.cpp [new file with mode: 0644] blob
c++/src/dbapi/bytestreambuf.hpp [new file with mode: 0644] blob
c++/src/dbapi/conn_impl.cpp [new file with mode: 0644] blob
c++/src/dbapi/conn_impl.hpp [new file with mode: 0644] blob
c++/src/dbapi/cstmt_impl.cpp [new file with mode: 0644] blob
c++/src/dbapi/cstmt_impl.hpp [new file with mode: 0644] blob
c++/src/dbapi/cursor_impl.cpp [new file with mode: 0644] blob
c++/src/dbapi/cursor_impl.hpp [new file with mode: 0644] blob
c++/src/dbapi/dbapi.cpp [new file with mode: 0644] blob
c++/src/dbapi/dbexception.hpp [new file with mode: 0644] blob
c++/src/dbapi/driver/CMakeLists.dbapi_driver.lib.txt [new file with mode: 0644] blob
c++/src/dbapi/driver/CMakeLists.txt [new file with mode: 0644] blob
c++/src/dbapi/driver/Makefile.dbapi_driver.lib [new file with mode: 0644] blob
c++/src/dbapi/driver/Makefile.dbapi_driver.lib.msvc [new file with mode: 0644] blob
c++/src/dbapi/driver/Makefile.in [new file with mode: 0644] blob
c++/src/dbapi/driver/dbapi_conn_factory.cpp [new file with mode: 0644] blob
c++/src/dbapi/driver/dbapi_driver_conn_mgr.cpp [new file with mode: 0644] blob
c++/src/dbapi/driver/dbapi_driver_conn_params.cpp [new file with mode: 0644] blob
c++/src/dbapi/driver/dbapi_driver_convert.cpp [new file with mode: 0644] blob
c++/src/dbapi/driver/dbapi_driver_exception_storage.cpp [new file with mode: 0644] blob
c++/src/dbapi/driver/dbapi_driver_exception_storage.hpp [new file with mode: 0644] blob
c++/src/dbapi/driver/dbapi_driver_sample_base.cpp [new file with mode: 0644] blob
c++/src/dbapi/driver/dbapi_driver_sample_base.hpp [new file with mode: 0644] blob
c++/src/dbapi/driver/dbapi_driver_utils.cpp [new file with mode: 0644] blob
c++/src/dbapi/driver/dbapi_impl_cmd.cpp [new file with mode: 0644] blob
c++/src/dbapi/driver/dbapi_impl_connection.cpp [new file with mode: 0644] blob
c++/src/dbapi/driver/dbapi_impl_context.cpp [new file with mode: 0644] blob
c++/src/dbapi/driver/dbapi_impl_result.cpp [new file with mode: 0644] blob
c++/src/dbapi/driver/dbapi_object_convert.cpp [new file with mode: 0644] blob
c++/src/dbapi/driver/dbapi_pool_balancer.cpp [new file with mode: 0644] blob
c++/src/dbapi/driver/dbapi_svc_mapper.cpp [new file with mode: 0644] blob
c++/src/dbapi/driver/driver_mgr.cpp [new file with mode: 0644] blob
c++/src/dbapi/driver/exception.cpp [new file with mode: 0644] blob
c++/src/dbapi/driver/handle_stack.cpp [new file with mode: 0644] blob
c++/src/dbapi/driver/interfaces.cpp [new file with mode: 0644] blob
c++/src/dbapi/driver/memory_store.cpp [new file with mode: 0644] blob
c++/src/dbapi/driver/memory_store.hpp [new file with mode: 0644] blob
c++/src/dbapi/driver/ncbi_win_hook.cpp [new file with mode: 0644] blob
c++/src/dbapi/driver/ncbi_win_hook.hpp [new file with mode: 0644] blob
c++/src/dbapi/driver/numeric_convert.cpp [new file with mode: 0644] blob
c++/src/dbapi/driver/odbc/CMakeLists.ncbi_xdbapi_odbc.lib.txt [new file with mode: 0644] blob
c++/src/dbapi/driver/odbc/CMakeLists.txt [new file with mode: 0644] blob
c++/src/dbapi/driver/odbc/Makefile.in [new file with mode: 0644] blob
c++/src/dbapi/driver/odbc/Makefile.ncbi_xdbapi_odbc.lib [new file with mode: 0644] blob
c++/src/dbapi/driver/odbc/Makefile.ncbi_xdbapi_odbc.lib.msvc [new file with mode: 0644] blob
c++/src/dbapi/driver/odbc/bcp.cpp [new file with mode: 0644] blob
c++/src/dbapi/driver/odbc/connection.cpp [new file with mode: 0644] blob
c++/src/dbapi/driver/odbc/context.cpp [new file with mode: 0644] blob
c++/src/dbapi/driver/odbc/cursor.cpp [new file with mode: 0644] blob
c++/src/dbapi/driver/odbc/lang_cmd.cpp [new file with mode: 0644] blob
c++/src/dbapi/driver/odbc/odbc_utils.cpp [new file with mode: 0644] blob
c++/src/dbapi/driver/odbc/odbc_utils.hpp [new file with mode: 0644] blob
c++/src/dbapi/driver/odbc/result.cpp [new file with mode: 0644] blob
c++/src/dbapi/driver/odbc/rpc.cpp [new file with mode: 0644] blob
c++/src/dbapi/driver/parameters.cpp [new file with mode: 0644] blob
c++/src/dbapi/driver/pointer_pot.cpp [new file with mode: 0644] blob
c++/src/dbapi/driver/public.cpp [new file with mode: 0644] blob
c++/src/dbapi/driver/types.cpp [new file with mode: 0644] blob
c++/src/dbapi/driver_mgr.cpp [new file with mode: 0644] blob
c++/src/dbapi/ds_impl.cpp [new file with mode: 0644] blob
c++/src/dbapi/ds_impl.hpp [new file with mode: 0644] blob
c++/src/dbapi/err_handler.cpp [new file with mode: 0644] blob
c++/src/dbapi/err_handler.hpp [new file with mode: 0644] blob
c++/src/dbapi/rs_impl.cpp [new file with mode: 0644] blob
c++/src/dbapi/rs_impl.hpp [new file with mode: 0644] blob
c++/src/dbapi/rsmeta_impl.cpp [new file with mode: 0644] blob
c++/src/dbapi/rsmeta_impl.hpp [new file with mode: 0644] blob
c++/src/dbapi/rw_impl.cpp [new file with mode: 0644] blob
c++/src/dbapi/rw_impl.hpp [new file with mode: 0644] blob
c++/src/dbapi/stmt_impl.cpp [new file with mode: 0644] blob
c++/src/dbapi/stmt_impl.hpp [new file with mode: 0644] blob
c++/src/dbapi/variant.cpp [new file with mode: 0644] blob
c++/src/html/CMakeLists.html.lib.txt [new file with mode: 0644] blob
c++/src/html/CMakeLists.txt [new file with mode: 0644] blob
c++/src/html/Makefile.html.lib [new file with mode: 0644] blob
c++/src/html/Makefile.in [new file with mode: 0644] blob
c++/src/html/commentdiag.cpp [new file with mode: 0644] blob
c++/src/html/components.cpp [new file with mode: 0644] blob
c++/src/html/html.cpp [new file with mode: 0644] blob
c++/src/html/html_exception.cpp [new file with mode: 0644] blob
c++/src/html/htmlhelper.cpp [new file with mode: 0644] blob
c++/src/html/indentstream.cpp [new file with mode: 0644] blob
c++/src/html/ncbi_menu.js [new file with mode: 0644] blob
c++/src/html/ncbi_menu_dnd.js [new file with mode: 0644] blob
c++/src/html/ncbi_menu_dyn.js [new file with mode: 0644] blob
c++/src/html/node.cpp [new file with mode: 0644] blob
c++/src/html/page.cpp [new file with mode: 0644] blob
c++/src/html/pager.cpp [new file with mode: 0644] blob
c++/src/html/selection.cpp [new file with mode: 0644] blob
c++/src/html/writer_htmlenc.cpp [new file with mode: 0644] blob
c++/src/misc/CMakeLists.txt [new file with mode: 0644] blob
c++/src/misc/Makefile.in [new file with mode: 0644] blob
c++/src/misc/jsonwrapp/CMakeLists.txt [new file with mode: 0644] blob
c++/src/misc/jsonwrapp/Makefile.in [new file with mode: 0644] blob
c++/src/misc/jsonwrapp/test/CMakeLists.test_jsonwrapp.app.txt [new file with mode: 0644] blob
c++/src/misc/jsonwrapp/test/CMakeLists.test_jsonwrapp_old.app.txt [new file with mode: 0644] blob
c++/src/misc/jsonwrapp/test/CMakeLists.txt [new file with mode: 0644] blob
c++/src/misc/jsonwrapp/test/Makefile.in [new file with mode: 0644] blob
c++/src/misc/jsonwrapp/test/Makefile.test_jsonwrapp.app [new file with mode: 0644] blob
c++/src/misc/jsonwrapp/test/Makefile.test_jsonwrapp10.app [new file with mode: 0644] blob
c++/src/misc/jsonwrapp/test/test_jsonwrapp.cpp [new file with mode: 0644] blob
c++/src/misc/jsonwrapp/test/test_jsonwrapp10.cpp [new file with mode: 0644] blob
c++/src/misc/third_party/CMakeLists.txt [new file with mode: 0644] blob
c++/src/misc/third_party/Makefile.in [new file with mode: 0644] blob
c++/src/misc/third_party/Makefile.third_party_dll_install.msvcproj [new file with mode: 0644] blob
c++/src/misc/third_party/Makefile.third_party_dll_install.msvcproj.msvc [new file with mode: 0644] blob
c++/src/misc/third_party/Makefile.third_party_msvcdll_install.msvcproj [new file with mode: 0644] blob
c++/src/misc/third_party_static/CMakeLists.txt [new file with mode: 0644] blob
c++/src/misc/third_party_static/Makefile.in [new file with mode: 0644] blob
c++/src/misc/third_party_static/Makefile.third_party_msvcstatic_install.msvcproj [new file with mode: 0644] blob
c++/src/misc/third_party_static/Makefile.third_party_static_install.msvcproj [new file with mode: 0644] blob
c++/src/misc/third_party_static/Makefile.third_party_static_install.msvcproj.msvc [new file with mode: 0644] blob
c++/src/objects/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/Makefile.in [new file with mode: 0644] blob
c++/src/objects/Makefile.sources [new file with mode: 0644] blob
c++/src/objects/access/CMakeLists.access.asn.txt [new file with mode: 0644] blob
c++/src/objects/access/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/access/Makefile.access.lib [new file with mode: 0644] blob
c++/src/objects/access/Makefile.in [new file with mode: 0644] blob
c++/src/objects/access/access.asn [new file with mode: 0644] blob
c++/src/objects/access/access.def [new file with mode: 0644] blob
c++/src/objects/access/access.module [new file with mode: 0644] blob
c++/src/objects/biblio/Affil.cpp [new file with mode: 0644] blob
c++/src/objects/biblio/Auth_list.cpp [new file with mode: 0644] blob
c++/src/objects/biblio/Author.cpp [new file with mode: 0644] blob
c++/src/objects/biblio/CMakeLists.biblio.asn.txt [new file with mode: 0644] blob
c++/src/objects/biblio/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/biblio/Cit_art.cpp [new file with mode: 0644] blob
c++/src/objects/biblio/Cit_book.cpp [new file with mode: 0644] blob
c++/src/objects/biblio/Cit_gen.cpp [new file with mode: 0644] blob
c++/src/objects/biblio/Cit_jour.cpp [new file with mode: 0644] blob
c++/src/objects/biblio/Cit_let.cpp [new file with mode: 0644] blob
c++/src/objects/biblio/Cit_pat.cpp [new file with mode: 0644] blob
c++/src/objects/biblio/Cit_proc.cpp [new file with mode: 0644] blob
c++/src/objects/biblio/Cit_sub.cpp [new file with mode: 0644] blob
c++/src/objects/biblio/Id_pat.cpp [new file with mode: 0644] blob
c++/src/objects/biblio/Makefile.biblio.lib [new file with mode: 0644] blob
c++/src/objects/biblio/Makefile.in [new file with mode: 0644] blob
c++/src/objects/biblio/Title.cpp [new file with mode: 0644] blob
c++/src/objects/biblio/biblio.asn [new file with mode: 0644] blob
c++/src/objects/biblio/biblio.def [new file with mode: 0644] blob
c++/src/objects/biblio/biblio.module [new file with mode: 0644] blob
c++/src/objects/biblio/citation_base.cpp [new file with mode: 0644] blob
c++/src/objects/biotree/BioTreeContainer.cpp [new file with mode: 0644] blob
c++/src/objects/biotree/CMakeLists.biotree.asn.txt [new file with mode: 0644] blob
c++/src/objects/biotree/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/biotree/DistanceMatrix.cpp [new file with mode: 0644] blob
c++/src/objects/biotree/Makefile.biotree.lib [new file with mode: 0644] blob
c++/src/objects/biotree/Makefile.in [new file with mode: 0644] blob
c++/src/objects/biotree/biotree.asn [new file with mode: 0644] blob
c++/src/objects/biotree/biotree.def [new file with mode: 0644] blob
c++/src/objects/biotree/biotree.module [new file with mode: 0644] blob
c++/src/objects/blast/.cvsignore.extra [new file with mode: 0644] blob
c++/src/objects/blast/Blast4_parameters.cpp [new file with mode: 0644] blob
c++/src/objects/blast/Blast4_queries.cpp [new file with mode: 0644] blob
c++/src/objects/blast/CMakeLists.blast.asn.txt [new file with mode: 0644] blob
c++/src/objects/blast/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/blast/CMakeLists.xnetblastcli.lib.txt [new file with mode: 0644] blob
c++/src/objects/blast/Makefile.blast.lib [new file with mode: 0644] blob
c++/src/objects/blast/Makefile.in [new file with mode: 0644] blob
c++/src/objects/blast/Makefile.xnetblastcli.lib [new file with mode: 0644] blob
c++/src/objects/blast/blast.asn [new file with mode: 0644] blob
c++/src/objects/blast/blast.def [new file with mode: 0644] blob
c++/src/objects/blast/blast.module [new file with mode: 0644] blob
c++/src/objects/blast/doc/blast.htm [new file with mode: 0644] blob
c++/src/objects/blast/doc/style.css [new file with mode: 0644] blob
c++/src/objects/blast/names.cpp [new file with mode: 0644] blob
c++/src/objects/blastdb/Blast_def_line.cpp [new file with mode: 0644] blob
c++/src/objects/blastdb/Blast_def_line_set.cpp [new file with mode: 0644] blob
c++/src/objects/blastdb/CMakeLists.blastdb.asn.txt [new file with mode: 0644] blob
c++/src/objects/blastdb/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/blastdb/Makefile.blastdb.lib [new file with mode: 0644] blob
c++/src/objects/blastdb/Makefile.in [new file with mode: 0644] blob
c++/src/objects/blastdb/blastdb.asn [new file with mode: 0644] blob
c++/src/objects/blastdb/blastdb.def [new file with mode: 0644] blob
c++/src/objects/blastdb/blastdb.module [new file with mode: 0644] blob
c++/src/objects/blastxml/CMakeLists.blastxml.asn.txt [new file with mode: 0644] blob
c++/src/objects/blastxml/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/blastxml/Makefile.blastxml.lib [new file with mode: 0644] blob
c++/src/objects/blastxml/Makefile.in [new file with mode: 0644] blob
c++/src/objects/blastxml/blastxml.asn [new file with mode: 0644] blob
c++/src/objects/blastxml/blastxml.def [new file with mode: 0644] blob
c++/src/objects/blastxml2/CMakeLists.blastxml2.asn.txt [new file with mode: 0644] blob
c++/src/objects/blastxml2/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/blastxml2/Makefile.blastxml2.lib [new file with mode: 0644] blob
c++/src/objects/blastxml2/Makefile.in [new file with mode: 0644] blob
c++/src/objects/blastxml2/blastxml2.asn [new file with mode: 0644] blob
c++/src/objects/blastxml2/blastxml2.def [new file with mode: 0644] blob
c++/src/objects/cdd/CMakeLists.cdd.asn.txt [new file with mode: 0644] blob
c++/src/objects/cdd/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/cdd/Cdd.cpp [new file with mode: 0644] blob
c++/src/objects/cdd/Makefile.cdd.lib [new file with mode: 0644] blob
c++/src/objects/cdd/Makefile.in [new file with mode: 0644] blob
c++/src/objects/cdd/cdd.asn [new file with mode: 0644] blob
c++/src/objects/cdd/cdd.def [new file with mode: 0644] blob
c++/src/objects/cdd/cdd.module [new file with mode: 0644] blob
c++/src/objects/cn3d/CMakeLists.cn3d.asn.txt [new file with mode: 0644] blob
c++/src/objects/cn3d/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/cn3d/Makefile.cn3d.lib [new file with mode: 0644] blob
c++/src/objects/cn3d/Makefile.in [new file with mode: 0644] blob
c++/src/objects/cn3d/cn3d.asn [new file with mode: 0644] blob
c++/src/objects/cn3d/cn3d.def [new file with mode: 0644] blob
c++/src/objects/cn3d/cn3d.module [new file with mode: 0644] blob
c++/src/objects/coords/CMakeLists.objcoords.asn.txt [new file with mode: 0644] blob
c++/src/objects/coords/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/coords/Makefile.in [new file with mode: 0644] blob
c++/src/objects/coords/Makefile.objcoords.lib [new file with mode: 0644] blob
c++/src/objects/coords/objcoords.asn [new file with mode: 0644] blob
c++/src/objects/coords/objcoords.def [new file with mode: 0644] blob
c++/src/objects/coords/objcoords.module [new file with mode: 0644] blob
c++/src/objects/dbsnp/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/dbsnp/Makefile.in [new file with mode: 0644] blob
c++/src/objects/dbsnp/primary_track/CMakeLists.dbsnp_primary_track.lib.txt [new file with mode: 0644] blob
c++/src/objects/dbsnp/primary_track/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/dbsnp/primary_track/Makefile.dbsnp.lib [new file with mode: 0644] blob
c++/src/objects/dbsnp/primary_track/Makefile.in [new file with mode: 0644] blob
c++/src/objects/dbsnp/primary_track/dbsnp.grpc.pb.wrapper.cc [new file with mode: 0644] blob
c++/src/objects/dbsnp/primary_track/dbsnp.pb.wrapper.cc [new file with mode: 0644] blob
c++/src/objects/dbsnp/primary_track/dbsnp.proto [new file with mode: 0644] blob
c++/src/objects/dbsnp/primary_track/snpptis.cpp [new file with mode: 0644] blob
c++/src/objects/docsum/CMakeLists.docsum.asn.txt [new file with mode: 0644] blob
c++/src/objects/docsum/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/docsum/Makefile.docsum.lib [new file with mode: 0644] blob
c++/src/objects/docsum/Makefile.in [new file with mode: 0644] blob
c++/src/objects/docsum/docsum.asn [new file with mode: 0644] blob
c++/src/objects/docsum/docsum.def [new file with mode: 0644] blob
c++/src/objects/docsum/docsum.module [new file with mode: 0644] blob
c++/src/objects/entrez2/.cvsignore.extra [new file with mode: 0644] blob
c++/src/objects/entrez2/CMakeLists.entrez2.asn.txt [new file with mode: 0644] blob
c++/src/objects/entrez2/CMakeLists.entrez2cli.lib.txt [new file with mode: 0644] blob
c++/src/objects/entrez2/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/entrez2/Entrez2_docsum.cpp [new file with mode: 0644] blob
c++/src/objects/entrez2/Entrez2_id_list.cpp [new file with mode: 0644] blob
c++/src/objects/entrez2/Makefile.entrez2.lib [new file with mode: 0644] blob
c++/src/objects/entrez2/Makefile.entrez2cli.lib [new file with mode: 0644] blob
c++/src/objects/entrez2/Makefile.in [new file with mode: 0644] blob
c++/src/objects/entrez2/entrez2.asn [new file with mode: 0644] blob
c++/src/objects/entrez2/entrez2.def [new file with mode: 0644] blob
c++/src/objects/entrez2/entrez2.module [new file with mode: 0644] blob
c++/src/objects/entrez2/entrez2_client.cpp [new file with mode: 0644] blob
c++/src/objects/entrezgene/CMakeLists.entrezgene.asn.txt [new file with mode: 0644] blob
c++/src/objects/entrezgene/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/entrezgene/Entrezgene.cpp [new file with mode: 0644] blob
c++/src/objects/entrezgene/Gene_commentary.cpp [new file with mode: 0644] blob
c++/src/objects/entrezgene/Makefile.entrezgene.lib [new file with mode: 0644] blob
c++/src/objects/entrezgene/Makefile.in [new file with mode: 0644] blob
c++/src/objects/entrezgene/entrezgene.asn [new file with mode: 0644] blob
c++/src/objects/entrezgene/entrezgene.def [new file with mode: 0644] blob
c++/src/objects/entrezgene/entrezgene.module [new file with mode: 0644] blob
c++/src/objects/featdef/CMakeLists.featdef.asn.txt [new file with mode: 0644] blob
c++/src/objects/featdef/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/featdef/Makefile.featdef.lib [new file with mode: 0644] blob
c++/src/objects/featdef/Makefile.in [new file with mode: 0644] blob
c++/src/objects/featdef/featdef.asn [new file with mode: 0644] blob
c++/src/objects/featdef/featdef.def [new file with mode: 0644] blob
c++/src/objects/featdef/featdef.module [new file with mode: 0644] blob
c++/src/objects/gbproj/AbstractProjectItem.cpp [new file with mode: 0755] blob
c++/src/objects/gbproj/CMakeLists.gbproj.asn.txt [new file with mode: 0644] blob
c++/src/objects/gbproj/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/gbproj/FolderInfo.cpp [new file with mode: 0755] blob
c++/src/objects/gbproj/GBProject_ver2.cpp [new file with mode: 0755] blob
c++/src/objects/gbproj/Makefile.gbproj.lib [new file with mode: 0755] blob
c++/src/objects/gbproj/Makefile.in [new file with mode: 0755] blob
c++/src/objects/gbproj/ProjectDescr.cpp [new file with mode: 0755] blob
c++/src/objects/gbproj/ProjectFolder.cpp [new file with mode: 0755] blob
c++/src/objects/gbproj/ProjectItem.cpp [new file with mode: 0755] blob
c++/src/objects/gbproj/gbproj.asn [new file with mode: 0755] blob
c++/src/objects/gbproj/gbproj.def [new file with mode: 0755] blob
c++/src/objects/gbproj/gbproj.module [new file with mode: 0755] blob
c++/src/objects/gbseq/CMakeLists.gbseq.asn.txt [new file with mode: 0644] blob
c++/src/objects/gbseq/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/gbseq/Makefile.gbseq.lib [new file with mode: 0644] blob
c++/src/objects/gbseq/Makefile.in [new file with mode: 0644] blob
c++/src/objects/gbseq/gbseq.asn [new file with mode: 0644] blob
c++/src/objects/gbseq/gbseq.def [new file with mode: 0644] blob
c++/src/objects/gbseq/gbseq.module [new file with mode: 0644] blob
c++/src/objects/general/CMakeLists.general.asn.txt [new file with mode: 0644] blob
c++/src/objects/general/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/general/Date.cpp [new file with mode: 0644] blob
c++/src/objects/general/Date_std.cpp [new file with mode: 0644] blob
c++/src/objects/general/Dbtag.cpp [new file with mode: 0644] blob
c++/src/objects/general/Int_fuzz.cpp [new file with mode: 0644] blob
c++/src/objects/general/Makefile.general.lib [new file with mode: 0644] blob
c++/src/objects/general/Makefile.in [new file with mode: 0644] blob
c++/src/objects/general/Name_std.cpp [new file with mode: 0644] blob
c++/src/objects/general/Object_id.cpp [new file with mode: 0644] blob
c++/src/objects/general/Person_id.cpp [new file with mode: 0644] blob
c++/src/objects/general/User_field.cpp [new file with mode: 0644] blob
c++/src/objects/general/User_object.cpp [new file with mode: 0644] blob
c++/src/objects/general/general.asn [new file with mode: 0644] blob
c++/src/objects/general/general.def [new file with mode: 0644] blob
c++/src/objects/general/general.module [new file with mode: 0644] blob
c++/src/objects/general/uoconv.cpp [new file with mode: 0644] blob
c++/src/objects/genesbyloc/CMakeLists.genesbyloc.asn.txt [new file with mode: 0644] blob
c++/src/objects/genesbyloc/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/genesbyloc/Makefile.genesbyloc.lib [new file with mode: 0644] blob
c++/src/objects/genesbyloc/Makefile.in [new file with mode: 0644] blob
c++/src/objects/genesbyloc/genesbyloc.asn [new file with mode: 0644] blob
c++/src/objects/genesbyloc/genesbyloc.def [new file with mode: 0644] blob
c++/src/objects/genesbyloc/genesbyloc.module [new file with mode: 0644] blob
c++/src/objects/genomecoll/.cvsignore.extra [new file with mode: 0644] blob
c++/src/objects/genomecoll/CMakeLists.gencoll_client.asn.txt [new file with mode: 0644] blob
c++/src/objects/genomecoll/CMakeLists.genome_collection.asn.txt [new file with mode: 0644] blob
c++/src/objects/genomecoll/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/genomecoll/GCClient_GetAssemblyBySequ.cpp [new file with mode: 0644] blob
c++/src/objects/genomecoll/GCClient_GetAssemblyReques.cpp [new file with mode: 0755] blob
c++/src/objects/genomecoll/GC_Assembly.cpp [new file with mode: 0644] blob
c++/src/objects/genomecoll/GC_AssemblySet.cpp [new file with mode: 0644] blob
c++/src/objects/genomecoll/GC_AssemblyUnit.cpp [new file with mode: 0644] blob
c++/src/objects/genomecoll/GC_Replicon.cpp [new file with mode: 0644] blob
c++/src/objects/genomecoll/GC_Sequence.cpp [new file with mode: 0644] blob
c++/src/objects/genomecoll/Makefile.gencoll_client.lib [new file with mode: 0644] blob
c++/src/objects/genomecoll/Makefile.genome_collection.lib [new file with mode: 0644] blob
c++/src/objects/genomecoll/Makefile.in [new file with mode: 0644] blob
c++/src/objects/genomecoll/cached_assembly.cpp [new file with mode: 0644] blob
c++/src/objects/genomecoll/gc_cli/CMakeLists.gc_cli.app.txt [new file with mode: 0644] blob
c++/src/objects/genomecoll/gc_cli/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/genomecoll/gc_cli/Makefile.gc_cli.app [new file with mode: 0644] blob
c++/src/objects/genomecoll/gc_cli/Makefile.in [new file with mode: 0644] blob
c++/src/objects/genomecoll/gc_cli/gc_cli.cpp [new file with mode: 0644] blob
c++/src/objects/genomecoll/gencoll.def [new file with mode: 0644] blob
c++/src/objects/genomecoll/gencoll.module [new file with mode: 0644] blob
c++/src/objects/genomecoll/gencoll_client.asn [new file with mode: 0755] blob
c++/src/objects/genomecoll/gencoll_client.def [new file with mode: 0644] blob
c++/src/objects/genomecoll/gencoll_client.module [new file with mode: 0644] blob
c++/src/objects/genomecoll/genome_collection.asn [new file with mode: 0644] blob
c++/src/objects/genomecoll/genome_collection.def [new file with mode: 0644] blob
c++/src/objects/genomecoll/genome_collection.module [new file with mode: 0644] blob
c++/src/objects/genomecoll/genomic_collections_cli.cpp [new file with mode: 0644] blob
c++/src/objects/homologene/CMakeLists.homologene.asn.txt [new file with mode: 0644] blob
c++/src/objects/homologene/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/homologene/HG_Gene.cpp [new file with mode: 0644] blob
c++/src/objects/homologene/Makefile.homologene.lib [new file with mode: 0644] blob
c++/src/objects/homologene/Makefile.in [new file with mode: 0644] blob
c++/src/objects/homologene/homologene.asn [new file with mode: 0644] blob
c++/src/objects/homologene/homologene.def [new file with mode: 0644] blob
c++/src/objects/homologene/homologene.module [new file with mode: 0644] blob
c++/src/objects/id1/.cvsignore.extra [new file with mode: 0644] blob
c++/src/objects/id1/CMakeLists.id1.asn.txt [new file with mode: 0644] blob
c++/src/objects/id1/CMakeLists.id1cli.lib.txt [new file with mode: 0644] blob
c++/src/objects/id1/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/id1/ID1server_back.cpp [new file with mode: 0644] blob
c++/src/objects/id1/Makefile.id1.lib [new file with mode: 0644] blob
c++/src/objects/id1/Makefile.id1cli.lib [new file with mode: 0644] blob
c++/src/objects/id1/Makefile.in [new file with mode: 0644] blob
c++/src/objects/id1/id1.asn [new file with mode: 0644] blob
c++/src/objects/id1/id1.def [new file with mode: 0644] blob
c++/src/objects/id1/id1.module [new file with mode: 0644] blob
c++/src/objects/id1/id1_client.cpp [new file with mode: 0644] blob
c++/src/objects/id2/.cvsignore.extra [new file with mode: 0644] blob
c++/src/objects/id2/CMakeLists.id2.asn.txt [new file with mode: 0644] blob
c++/src/objects/id2/CMakeLists.id2cli.lib.txt [new file with mode: 0644] blob
c++/src/objects/id2/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/id2/ID2_Reply_Data.cpp [new file with mode: 0644] blob
c++/src/objects/id2/ID2_Request_Packet.cpp [new file with mode: 0644] blob
c++/src/objects/id2/Makefile.id2.lib [new file with mode: 0644] blob
c++/src/objects/id2/Makefile.id2cli.lib [new file with mode: 0644] blob
c++/src/objects/id2/Makefile.in [new file with mode: 0644] blob
c++/src/objects/id2/id2.asn [new file with mode: 0644] blob
c++/src/objects/id2/id2.def [new file with mode: 0644] blob
c++/src/objects/id2/id2.module [new file with mode: 0644] blob
c++/src/objects/id2/id2.txt [new file with mode: 0644] blob
c++/src/objects/id2/id2_client.cpp [new file with mode: 0644] blob
c++/src/objects/insdseq/CMakeLists.insdseq.asn.txt [new file with mode: 0644] blob
c++/src/objects/insdseq/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/insdseq/Makefile.in [new file with mode: 0644] blob
c++/src/objects/insdseq/Makefile.insdseq.lib [new file with mode: 0644] blob
c++/src/objects/insdseq/insdseq.asn [new file with mode: 0644] blob
c++/src/objects/insdseq/insdseq.def [new file with mode: 0644] blob
c++/src/objects/insdseq/insdseq.module [new file with mode: 0644] blob
c++/src/objects/macro/CMakeLists.macro.asn.txt [new file with mode: 0644] blob
c++/src/objects/macro/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/macro/Constraint_choice.cpp [new file with mode: 0644] blob
c++/src/objects/macro/Constraint_choice_set.cpp [new file with mode: 0644] blob
c++/src/objects/macro/Feat_qual_choice.cpp [new file with mode: 0644] blob
c++/src/objects/macro/Feature_field.cpp [new file with mode: 0644] blob
c++/src/objects/macro/Field_constraint.cpp [new file with mode: 0644] blob
c++/src/objects/macro/Field_type.cpp [new file with mode: 0644] blob
c++/src/objects/macro/Location_constraint.cpp [new file with mode: 0644] blob
c++/src/objects/macro/Location_pos_constraint.cpp [new file with mode: 0644] blob
c++/src/objects/macro/Makefile.in [new file with mode: 0644] blob
c++/src/objects/macro/Makefile.macro.lib [new file with mode: 0644] blob
c++/src/objects/macro/Molinfo_field.cpp [new file with mode: 0644] blob
c++/src/objects/macro/README.txt [new file with mode: 0644] blob
c++/src/objects/macro/Replace_func.cpp [new file with mode: 0644] blob
c++/src/objects/macro/Replace_rule.cpp [new file with mode: 0644] blob
c++/src/objects/macro/Rna_feat_type.cpp [new file with mode: 0644] blob
c++/src/objects/macro/Rna_qual.cpp [new file with mode: 0644] blob
c++/src/objects/macro/Search_func.cpp [new file with mode: 0644] blob
c++/src/objects/macro/Simple_replace.cpp [new file with mode: 0644] blob
c++/src/objects/macro/Source_qual_choice.cpp [new file with mode: 0644] blob
c++/src/objects/macro/String_constraint.cpp [new file with mode: 0644] blob
c++/src/objects/macro/Suspect_rule.cpp [new file with mode: 0644] blob
c++/src/objects/macro/Suspect_rule_set.cpp [new file with mode: 0644] blob
c++/src/objects/macro/Word_substitution.cpp [new file with mode: 0644] blob
c++/src/objects/macro/macro.asn [new file with mode: 0755] blob
c++/src/objects/macro/macro.module [new file with mode: 0644] blob
c++/src/objects/macro/weasel.inc [new file with mode: 0644] blob
c++/src/objects/macro/weasel.txt [new file with mode: 0644] blob
c++/src/objects/medlars/CMakeLists.medlars.asn.txt [new file with mode: 0644] blob
c++/src/objects/medlars/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/medlars/Makefile.in [new file with mode: 0644] blob
c++/src/objects/medlars/Makefile.medlars.lib [new file with mode: 0644] blob
c++/src/objects/medlars/medlars.asn [new file with mode: 0644] blob
c++/src/objects/medlars/medlars.def [new file with mode: 0644] blob
c++/src/objects/medlars/medlars.module [new file with mode: 0644] blob
c++/src/objects/medline/CMakeLists.medline.asn.txt [new file with mode: 0644] blob
c++/src/objects/medline/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/medline/Makefile.in [new file with mode: 0644] blob
c++/src/objects/medline/Makefile.medline.lib [new file with mode: 0644] blob
c++/src/objects/medline/Medline_entry.cpp [new file with mode: 0644] blob
c++/src/objects/medline/medline.asn [new file with mode: 0644] blob
c++/src/objects/medline/medline.def [new file with mode: 0644] blob
c++/src/objects/medline/medline.module [new file with mode: 0644] blob
c++/src/objects/mim/CMakeLists.mim.asn.txt [new file with mode: 0644] blob
c++/src/objects/mim/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/mim/Makefile.in [new file with mode: 0644] blob
c++/src/objects/mim/Makefile.mim.lib [new file with mode: 0644] blob
c++/src/objects/mim/mim.asn [new file with mode: 0644] blob
c++/src/objects/mim/mim.def [new file with mode: 0644] blob
c++/src/objects/mim/mim.module [new file with mode: 0644] blob
c++/src/objects/mla/.cvsignore.extra [new file with mode: 0644] blob
c++/src/objects/mla/CMakeLists.mla.asn.txt [new file with mode: 0644] blob
c++/src/objects/mla/CMakeLists.mlacli.lib.txt [new file with mode: 0644] blob
c++/src/objects/mla/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/mla/Makefile.in [new file with mode: 0644] blob
c++/src/objects/mla/Makefile.mla.lib [new file with mode: 0644] blob
c++/src/objects/mla/Makefile.mlacli.lib [new file with mode: 0644] blob
c++/src/objects/mla/mla.asn [new file with mode: 0644] blob
c++/src/objects/mla/mla.def [new file with mode: 0644] blob
c++/src/objects/mla/mla.module [new file with mode: 0644] blob
c++/src/objects/mla/mla_client.cpp [new file with mode: 0644] blob
c++/src/objects/mmdb/CMakeLists.mmdb.lib.txt [new file with mode: 0644] blob
c++/src/objects/mmdb/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/mmdb/Makefile.in [new file with mode: 0644] blob
c++/src/objects/mmdb/Makefile.mmdb.lib [new file with mode: 0644] blob
c++/src/objects/mmdb/Makefile.sources [new file with mode: 0644] blob
c++/src/objects/mmdb1/Biostruc.cpp [new file with mode: 0644] blob
c++/src/objects/mmdb1/mmdb1.asn [new file with mode: 0644] blob
c++/src/objects/mmdb1/mmdb1.def [new file with mode: 0644] blob
c++/src/objects/mmdb1/mmdb1.module [new file with mode: 0644] blob
c++/src/objects/mmdb2/mmdb2.asn [new file with mode: 0644] blob
c++/src/objects/mmdb2/mmdb2.def [new file with mode: 0644] blob
c++/src/objects/mmdb2/mmdb2.module [new file with mode: 0644] blob
c++/src/objects/mmdb3/mmdb3.asn [new file with mode: 0644] blob
c++/src/objects/mmdb3/mmdb3.def [new file with mode: 0644] blob
c++/src/objects/mmdb3/mmdb3.module [new file with mode: 0644] blob
c++/src/objects/ncbimime/CMakeLists.ncbimime.asn.txt [new file with mode: 0644] blob
c++/src/objects/ncbimime/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/ncbimime/Makefile.in [new file with mode: 0644] blob
c++/src/objects/ncbimime/Makefile.ncbimime.lib [new file with mode: 0644] blob
c++/src/objects/ncbimime/Ncbi_mime_asn1.cpp [new file with mode: 0644] blob
c++/src/objects/ncbimime/ncbimime.asn [new file with mode: 0644] blob
c++/src/objects/ncbimime/ncbimime.def [new file with mode: 0644] blob
c++/src/objects/ncbimime/ncbimime.module [new file with mode: 0644] blob
c++/src/objects/nt_sources.cmd [new file with mode: 0644] blob
c++/src/objects/nt_sources.sh [new file with mode: 0644] blob
c++/src/objects/objprt/CMakeLists.objprt.asn.txt [new file with mode: 0644] blob
c++/src/objects/objprt/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/objprt/Makefile.in [new file with mode: 0644] blob
c++/src/objects/objprt/Makefile.objprt.lib [new file with mode: 0644] blob
c++/src/objects/objprt/objprt.asn [new file with mode: 0644] blob
c++/src/objects/objprt/objprt.def [new file with mode: 0644] blob
c++/src/objects/objprt/objprt.module [new file with mode: 0644] blob
c++/src/objects/omssa/CMakeLists.omssa.asn.txt [new file with mode: 0644] blob
c++/src/objects/omssa/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/omssa/MSBioseqSet.cpp [new file with mode: 0644] blob
c++/src/objects/omssa/MSHits.cpp [new file with mode: 0644] blob
c++/src/objects/omssa/MSModSpecSet.cpp [new file with mode: 0644] blob
c++/src/objects/omssa/MSRequest.cpp [new file with mode: 0644] blob
c++/src/objects/omssa/MSResponse.cpp [new file with mode: 0644] blob
c++/src/objects/omssa/MSSearch.cpp [new file with mode: 0644] blob
c++/src/objects/omssa/MSSearchSettings.cpp [new file with mode: 0644] blob
c++/src/objects/omssa/Makefile.in [new file with mode: 0644] blob
c++/src/objects/omssa/Makefile.omssa.lib [new file with mode: 0644] blob
c++/src/objects/omssa/omssa.asn [new file with mode: 0644] blob
c++/src/objects/omssa/omssa.def [new file with mode: 0644] blob
c++/src/objects/omssa/omssa.module [new file with mode: 0644] blob
c++/src/objects/pcassay/CMakeLists.pcassay.asn.txt [new file with mode: 0644] blob
c++/src/objects/pcassay/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/pcassay/Makefile.in [new file with mode: 0644] blob
c++/src/objects/pcassay/Makefile.pcassay.lib [new file with mode: 0644] blob
c++/src/objects/pcassay/pcassay.asn [new file with mode: 0644] blob
c++/src/objects/pcassay/pcassay.def [new file with mode: 0755] blob
c++/src/objects/pcassay/pcassay.module [new file with mode: 0755] blob
c++/src/objects/pcsubstance/CMakeLists.pcsubstance.asn.txt [new file with mode: 0644] blob
c++/src/objects/pcsubstance/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/pcsubstance/Makefile.in [new file with mode: 0644] blob
c++/src/objects/pcsubstance/Makefile.pcsubstance.lib [new file with mode: 0644] blob
c++/src/objects/pcsubstance/pcsubstance.asn [new file with mode: 0644] blob
c++/src/objects/pcsubstance/pcsubstance.def [new file with mode: 0755] blob
c++/src/objects/pcsubstance/pcsubstance.module [new file with mode: 0755] blob
c++/src/objects/proj/CMakeLists.proj.asn.txt [new file with mode: 0644] blob
c++/src/objects/proj/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/proj/Makefile.in [new file with mode: 0644] blob
c++/src/objects/proj/Makefile.proj.lib [new file with mode: 0644] blob
c++/src/objects/proj/proj.asn [new file with mode: 0644] blob
c++/src/objects/proj/proj.def [new file with mode: 0644] blob
c++/src/objects/proj/proj.module [new file with mode: 0644] blob
c++/src/objects/pub/CMakeLists.pub.asn.txt [new file with mode: 0644] blob
c++/src/objects/pub/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/pub/Makefile.in [new file with mode: 0644] blob
c++/src/objects/pub/Makefile.pub.lib [new file with mode: 0644] blob
c++/src/objects/pub/Pub.cpp [new file with mode: 0644] blob
c++/src/objects/pub/Pub_equiv.cpp [new file with mode: 0644] blob
c++/src/objects/pub/Pub_set.cpp [new file with mode: 0644] blob
c++/src/objects/pub/pub.asn [new file with mode: 0644] blob
c++/src/objects/pub/pub.def [new file with mode: 0644] blob
c++/src/objects/pub/pub.module [new file with mode: 0644] blob
c++/src/objects/pubmed/CMakeLists.pubmed.asn.txt [new file with mode: 0644] blob
c++/src/objects/pubmed/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/pubmed/Makefile.in [new file with mode: 0644] blob
c++/src/objects/pubmed/Makefile.pubmed.lib [new file with mode: 0644] blob
c++/src/objects/pubmed/pubmed.asn [new file with mode: 0644] blob
c++/src/objects/pubmed/pubmed.def [new file with mode: 0644] blob
c++/src/objects/pubmed/pubmed.module [new file with mode: 0644] blob
c++/src/objects/remap/.cvsignore.extra [new file with mode: 0644] blob
c++/src/objects/remap/CMakeLists.remap.asn.txt [new file with mode: 0644] blob
c++/src/objects/remap/CMakeLists.remapcli.lib.txt [new file with mode: 0644] blob
c++/src/objects/remap/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/remap/Makefile.in [new file with mode: 0644] blob
c++/src/objects/remap/Makefile.remap.lib [new file with mode: 0644] blob
c++/src/objects/remap/Makefile.remapcli.lib [new file with mode: 0644] blob
c++/src/objects/remap/remap.asn [new file with mode: 0644] blob
c++/src/objects/remap/remap.def [new file with mode: 0644] blob
c++/src/objects/remap/remap.module [new file with mode: 0644] blob
c++/src/objects/remap/remap_client.cpp [new file with mode: 0644] blob
c++/src/objects/scoremat/CMakeLists.scoremat.asn.txt [new file with mode: 0644] blob
c++/src/objects/scoremat/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/scoremat/FormatRpsDbParameters.cpp [new file with mode: 0644] blob
c++/src/objects/scoremat/Makefile.in [new file with mode: 0644] blob
c++/src/objects/scoremat/Makefile.scoremat.lib [new file with mode: 0644] blob
c++/src/objects/scoremat/Pssm.cpp [new file with mode: 0644] blob
c++/src/objects/scoremat/PssmWithParameters.cpp [new file with mode: 0644] blob
c++/src/objects/scoremat/scoremat.asn [new file with mode: 0644] blob
c++/src/objects/scoremat/scoremat.def [new file with mode: 0644] blob
c++/src/objects/scoremat/scoremat.module [new file with mode: 0644] blob
c++/src/objects/seq/Bioseq.cpp [new file with mode: 0644] blob
c++/src/objects/seq/CMakeLists.seq.asn.txt [new file with mode: 0644] blob
c++/src/objects/seq/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/seq/Delta_ext.cpp [new file with mode: 0644] blob
c++/src/objects/seq/Linkage_evidence.cpp [new file with mode: 0644] blob
c++/src/objects/seq/Makefile.in [new file with mode: 0644] blob
c++/src/objects/seq/Makefile.seq.lib [new file with mode: 0644] blob
c++/src/objects/seq/Makefile.seq.lib.unix [new file with mode: 0644] blob
c++/src/objects/seq/Makefile.sources [new file with mode: 0644] blob
c++/src/objects/seq/MolInfo.cpp [new file with mode: 0644] blob
c++/src/objects/seq/Pubdesc.cpp [new file with mode: 0644] blob
c++/src/objects/seq/Seq_annot.cpp [new file with mode: 0644] blob
c++/src/objects/seq/Seq_data.cpp [new file with mode: 0644] blob
c++/src/objects/seq/Seq_descr.cpp [new file with mode: 0644] blob
c++/src/objects/seq/Seq_gap.cpp [new file with mode: 0644] blob
c++/src/objects/seq/Seq_inst.cpp [new file with mode: 0644] blob
c++/src/objects/seq/Seq_literal.cpp [new file with mode: 0644] blob
c++/src/objects/seq/Seqdesc.cpp [new file with mode: 0644] blob
c++/src/objects/seq/seq.asn [new file with mode: 0644] blob
c++/src/objects/seq/seq.def [new file with mode: 0644] blob
c++/src/objects/seq/seq.module [new file with mode: 0644] blob
c++/src/objects/seq/seq_align_mapper_base.cpp [new file with mode: 0644] blob
c++/src/objects/seq/seq_annot_ref.asn [new file with mode: 0644] blob
c++/src/objects/seq/seq_annot_ref.txt [new file with mode: 0644] blob
c++/src/objects/seq/seq_id_handle.cpp [new file with mode: 0644] blob
c++/src/objects/seq/seq_id_mapper.cpp [new file with mode: 0644] blob
c++/src/objects/seq/seq_id_tree.cpp [new file with mode: 0644] blob
c++/src/objects/seq/seq_id_tree.hpp [new file with mode: 0644] blob
c++/src/objects/seq/seq_loc_from_string.cpp [new file with mode: 0644] blob
c++/src/objects/seq/seq_loc_mapper_base.cpp [new file with mode: 0644] blob
c++/src/objects/seq/seq_loc_reverse_complementer.cpp [new file with mode: 0644] blob
c++/src/objects/seq/seqlocinfo.cpp [new file with mode: 0644] blob
c++/src/objects/seq/seqport_util.cpp [new file with mode: 0644] blob
c++/src/objects/seq/so_map.cpp [new file with mode: 0644] blob
c++/src/objects/seq/sofa_map.cpp [new file with mode: 0644] blob
c++/src/objects/seqalign/Dense_diag.cpp [new file with mode: 0644] blob
c++/src/objects/seqalign/Dense_seg.cpp [new file with mode: 0644] blob
c++/src/objects/seqalign/Product_pos.cpp [new file with mode: 0644] blob
c++/src/objects/seqalign/Score.cpp [new file with mode: 0644] blob
c++/src/objects/seqalign/Seq_align.cpp [new file with mode: 0644] blob
c++/src/objects/seqalign/Seq_align_set.cpp [new file with mode: 0644] blob
c++/src/objects/seqalign/Sparse_align.cpp [new file with mode: 0644] blob
c++/src/objects/seqalign/Sparse_seg.cpp [new file with mode: 0644] blob
c++/src/objects/seqalign/Spliced_exon.cpp [new file with mode: 0644] blob
c++/src/objects/seqalign/Spliced_seg.cpp [new file with mode: 0644] blob
c++/src/objects/seqalign/Std_seg.cpp [new file with mode: 0644] blob
c++/src/objects/seqalign/seqalign.asn [new file with mode: 0644] blob
c++/src/objects/seqalign/seqalign.def [new file with mode: 0644] blob
c++/src/objects/seqalign/seqalign.module [new file with mode: 0644] blob
c++/src/objects/seqblock/GB_block.cpp [new file with mode: 0644] blob
c++/src/objects/seqblock/seqblock.asn [new file with mode: 0644] blob
c++/src/objects/seqblock/seqblock.def [new file with mode: 0644] blob
c++/src/objects/seqblock/seqblock.module [new file with mode: 0644] blob
c++/src/objects/seqcode/CMakeLists.seqcode.asn.txt [new file with mode: 0644] blob
c++/src/objects/seqcode/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/seqcode/Makefile.in [new file with mode: 0644] blob
c++/src/objects/seqcode/Makefile.seqcode.lib [new file with mode: 0644] blob
c++/src/objects/seqcode/seqcode.asn [new file with mode: 0644] blob
c++/src/objects/seqcode/seqcode.def [new file with mode: 0644] blob
c++/src/objects/seqcode/seqcode.module [new file with mode: 0644] blob
c++/src/objects/seqedit/CMakeLists.seqedit.asn.txt [new file with mode: 0644] blob
c++/src/objects/seqedit/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/seqedit/Makefile.in [new file with mode: 0644] blob
c++/src/objects/seqedit/Makefile.seqedit.lib [new file with mode: 0644] blob
c++/src/objects/seqedit/seqedit.asn [new file with mode: 0644] blob
c++/src/objects/seqedit/seqedit.def [new file with mode: 0755] blob
c++/src/objects/seqedit/seqedit.module [new file with mode: 0644] blob
c++/src/objects/seqfeat/BioSource.cpp [new file with mode: 0644] blob
c++/src/objects/seqfeat/Delta_item.cpp [new file with mode: 0644] blob
c++/src/objects/seqfeat/Gb_qual.cpp [new file with mode: 0644] blob
c++/src/objects/seqfeat/Gene_ref.cpp [new file with mode: 0644] blob
c++/src/objects/seqfeat/Genetic_code.cpp [new file with mode: 0644] blob
c++/src/objects/seqfeat/Genetic_code_table.cpp [new file with mode: 0644] blob
c++/src/objects/seqfeat/Imp_feat.cpp [new file with mode: 0644] blob
c++/src/objects/seqfeat/OrgMod.cpp [new file with mode: 0644] blob
c++/src/objects/seqfeat/OrgName.cpp [new file with mode: 0644] blob
c++/src/objects/seqfeat/Org_ref.cpp [new file with mode: 0644] blob
c++/src/objects/seqfeat/PCRPrimerSeq.cpp [new file with mode: 0644] blob
c++/src/objects/seqfeat/Prot_ref.cpp [new file with mode: 0644] blob
c++/src/objects/seqfeat/RNA_gen.cpp [new file with mode: 0644] blob
c++/src/objects/seqfeat/RNA_ref.cpp [new file with mode: 0644] blob
c++/src/objects/seqfeat/SeqFeatData.cpp [new file with mode: 0644] blob
c++/src/objects/seqfeat/Seq_feat.cpp [new file with mode: 0644] blob
c++/src/objects/seqfeat/SubSource.cpp [new file with mode: 0644] blob
c++/src/objects/seqfeat/Trna_ext.cpp [new file with mode: 0644] blob
c++/src/objects/seqfeat/VariantProperties.cpp [new file with mode: 0644] blob
c++/src/objects/seqfeat/Variation_ref.cpp [new file with mode: 0644] blob
c++/src/objects/seqfeat/adjust_cell_line.pl [new file with mode: 0755] blob
c++/src/objects/seqfeat/cell_line.inc [new file with mode: 0644] blob
c++/src/objects/seqfeat/cell_line.txt [new file with mode: 0644] blob
c++/src/objects/seqfeat/common_tax.inc [new file with mode: 0644] blob
c++/src/objects/seqfeat/common_tax.txt [new file with mode: 0644] blob
c++/src/objects/seqfeat/ecnum_ambiguous.inc [new file with mode: 0644] blob
c++/src/objects/seqfeat/ecnum_ambiguous.txt [new file with mode: 0644] blob
c++/src/objects/seqfeat/ecnum_deleted.inc [new file with mode: 0644] blob
c++/src/objects/seqfeat/ecnum_deleted.txt [new file with mode: 0644] blob
c++/src/objects/seqfeat/ecnum_replaced.inc [new file with mode: 0644] blob
c++/src/objects/seqfeat/ecnum_replaced.txt [new file with mode: 0644] blob
c++/src/objects/seqfeat/ecnum_specific.inc [new file with mode: 0644] blob
c++/src/objects/seqfeat/ecnum_specific.txt [new file with mode: 0644] blob
c++/src/objects/seqfeat/gc.inc [new file with mode: 0644] blob
c++/src/objects/seqfeat/gc.prt [new file with mode: 0644] blob
c++/src/objects/seqfeat/institution_codes.inc [new file with mode: 0644] blob
c++/src/objects/seqfeat/institution_codes.txt [new file with mode: 0644] blob
c++/src/objects/seqfeat/isolation_sources.inc [new file with mode: 0644] blob
c++/src/objects/seqfeat/isolation_sources.txt [new file with mode: 0644] blob
c++/src/objects/seqfeat/lat_lon_country.inc [new file with mode: 0644] blob
c++/src/objects/seqfeat/lat_lon_country.txt [new file with mode: 0644] blob
c++/src/objects/seqfeat/lat_lon_island.inc [new file with mode: 0644] blob
c++/src/objects/seqfeat/lat_lon_island.txt [new file with mode: 0644] blob
c++/src/objects/seqfeat/lat_lon_water.inc [new file with mode: 0644] blob
c++/src/objects/seqfeat/lat_lon_water.txt [new file with mode: 0644] blob
c++/src/objects/seqfeat/mk_cell_line.sh [new file with mode: 0755] blob
c++/src/objects/seqfeat/prepare_taxtable.sh [new file with mode: 0644] blob
c++/src/objects/seqfeat/seqfeat.asn [new file with mode: 0644] blob
c++/src/objects/seqfeat/seqfeat.def [new file with mode: 0644] blob
c++/src/objects/seqfeat/seqfeat.module [new file with mode: 0644] blob
c++/src/objects/seqloc/PDB_seq_id.cpp [new file with mode: 0644] blob
c++/src/objects/seqloc/Packed_seqint.cpp [new file with mode: 0644] blob
c++/src/objects/seqloc/Packed_seqpnt.cpp [new file with mode: 0644] blob
c++/src/objects/seqloc/Patent_seq_id.cpp [new file with mode: 0644] blob
c++/src/objects/seqloc/Seq_bond.cpp [new file with mode: 0644] blob
c++/src/objects/seqloc/Seq_id.cpp [new file with mode: 0644] blob
c++/src/objects/seqloc/Seq_interval.cpp [new file with mode: 0644] blob
c++/src/objects/seqloc/Seq_loc.cpp [new file with mode: 0644] blob
c++/src/objects/seqloc/Seq_loc_equiv.cpp [new file with mode: 0644] blob
c++/src/objects/seqloc/Seq_loc_mix.cpp [new file with mode: 0644] blob
c++/src/objects/seqloc/Seq_point.cpp [new file with mode: 0644] blob
c++/src/objects/seqloc/Textseq_id.cpp [new file with mode: 0644] blob
c++/src/objects/seqloc/accguide.txt [new file with mode: 0644] blob
c++/src/objects/seqloc/accguide2.inc [new file with mode: 0644] blob
c++/src/objects/seqloc/accguide2.txt [new file with mode: 0644] blob
c++/src/objects/seqloc/seqloc.asn [new file with mode: 0644] blob
c++/src/objects/seqloc/seqloc.def [new file with mode: 0644] blob
c++/src/objects/seqloc/seqloc.module [new file with mode: 0644] blob
c++/src/objects/seqres/Seq_graph.cpp [new file with mode: 0644] blob
c++/src/objects/seqres/seqres.asn [new file with mode: 0644] blob
c++/src/objects/seqres/seqres.def [new file with mode: 0644] blob
c++/src/objects/seqres/seqres.module [new file with mode: 0644] blob
c++/src/objects/seqset/Bioseq_set.cpp [new file with mode: 0644] blob
c++/src/objects/seqset/CMakeLists.seqset.asn.txt [new file with mode: 0644] blob
c++/src/objects/seqset/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/seqset/Makefile.in [new file with mode: 0644] blob
c++/src/objects/seqset/Makefile.seqset.lib [new file with mode: 0644] blob
c++/src/objects/seqset/Seq_entry.cpp [new file with mode: 0644] blob
c++/src/objects/seqset/gb_release_file.cpp [new file with mode: 0644] blob
c++/src/objects/seqset/seqset.asn [new file with mode: 0644] blob
c++/src/objects/seqset/seqset.def [new file with mode: 0644] blob
c++/src/objects/seqset/seqset.module [new file with mode: 0644] blob
c++/src/objects/seqsplit/CMakeLists.seqsplit.asn.txt [new file with mode: 0644] blob
c++/src/objects/seqsplit/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/seqsplit/Makefile.in [new file with mode: 0644] blob
c++/src/objects/seqsplit/Makefile.seqsplit.lib [new file with mode: 0644] blob
c++/src/objects/seqsplit/seqsplit.asn [new file with mode: 0644] blob
c++/src/objects/seqsplit/seqsplit.def [new file with mode: 0644] blob
c++/src/objects/seqsplit/seqsplit.module [new file with mode: 0644] blob
c++/src/objects/seqtable/BVector_data.cpp [new file with mode: 0644] blob
c++/src/objects/seqtable/Scaled_int_multi_data.cpp [new file with mode: 0644] blob
c++/src/objects/seqtable/Scaled_real_multi_data.cpp [new file with mode: 0644] blob
c++/src/objects/seqtable/SeqTable_column.cpp [new file with mode: 0644] blob
c++/src/objects/seqtable/SeqTable_column_info.cpp [new file with mode: 0644] blob
c++/src/objects/seqtable/SeqTable_multi_data.cpp [new file with mode: 0644] blob
c++/src/objects/seqtable/SeqTable_single_data.cpp [new file with mode: 0644] blob
c++/src/objects/seqtable/SeqTable_sparse_index.cpp [new file with mode: 0644] blob
c++/src/objects/seqtable/Seq_table.cpp [new file with mode: 0644] blob
c++/src/objects/seqtable/samples/annot.cdd.asn [new file with mode: 0644] blob
c++/src/objects/seqtable/samples/annot.cdd.table.asn [new file with mode: 0644] blob
c++/src/objects/seqtable/samples/annot.exon.asn [new file with mode: 0644] blob
c++/src/objects/seqtable/samples/annot.exon.table.asn [new file with mode: 0644] blob
c++/src/objects/seqtable/samples/annot.mgc.asn [new file with mode: 0644] blob
c++/src/objects/seqtable/samples/annot.mgc.table.asn [new file with mode: 0644] blob
c++/src/objects/seqtable/samples/annot.snp.asn [new file with mode: 0644] blob
c++/src/objects/seqtable/samples/annot.snp.table.asn [new file with mode: 0644] blob
c++/src/objects/seqtable/samples/annot.snp2.asn [new file with mode: 0644] blob
c++/src/objects/seqtable/samples/annot.snp2.table.asn [new file with mode: 0644] blob
c++/src/objects/seqtable/samples/annot.sts.asn [new file with mode: 0644] blob
c++/src/objects/seqtable/samples/annot.sts.table.asn [new file with mode: 0644] blob
c++/src/objects/seqtable/samples/annot.trna.asn [new file with mode: 0644] blob
c++/src/objects/seqtable/samples/annot.trna.table.asn [new file with mode: 0644] blob
c++/src/objects/seqtable/samples/make_snp_table.pl [new file with mode: 0755] blob
c++/src/objects/seqtable/seqtable.asn [new file with mode: 0644] blob
c++/src/objects/seqtable/seqtable.def [new file with mode: 0644] blob
c++/src/objects/seqtable/seqtable.module [new file with mode: 0644] blob
c++/src/objects/seqtest/CMakeLists.seqtest.asn.txt [new file with mode: 0644] blob
c++/src/objects/seqtest/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/seqtest/Makefile.in [new file with mode: 0644] blob
c++/src/objects/seqtest/Makefile.seqtest.lib [new file with mode: 0644] blob
c++/src/objects/seqtest/seqtest.asn [new file with mode: 0644] blob
c++/src/objects/seqtest/seqtest.def [new file with mode: 0644] blob
c++/src/objects/seqtest/seqtest.module [new file with mode: 0644] blob
c++/src/objects/submit/CMakeLists.submit.asn.txt [new file with mode: 0644] blob
c++/src/objects/submit/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/submit/Makefile.in [new file with mode: 0644] blob
c++/src/objects/submit/Makefile.submit.lib [new file with mode: 0644] blob
c++/src/objects/submit/Seq_submit.cpp [new file with mode: 0644] blob
c++/src/objects/submit/submit.asn [new file with mode: 0644] blob
c++/src/objects/submit/submit.def [new file with mode: 0644] blob
c++/src/objects/submit/submit.module [new file with mode: 0644] blob
c++/src/objects/taxon1/CMakeLists.local_taxon.lib.txt [new file with mode: 0644] blob
c++/src/objects/taxon1/CMakeLists.taxon1.asn.txt [new file with mode: 0644] blob
c++/src/objects/taxon1/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/taxon1/Makefile.in [new file with mode: 0644] blob
c++/src/objects/taxon1/Makefile.local_taxon.lib [new file with mode: 0644] blob
c++/src/objects/taxon1/Makefile.taxon1.lib [new file with mode: 0644] blob
c++/src/objects/taxon1/Taxon1_error.cpp [new file with mode: 0644] blob
c++/src/objects/taxon1/Taxon2_data.cpp [new file with mode: 0644] blob
c++/src/objects/taxon1/cache.cpp [new file with mode: 0644] blob
c++/src/objects/taxon1/cache.hpp [new file with mode: 0644] blob
c++/src/objects/taxon1/ctreecont.cpp [new file with mode: 0644] blob
c++/src/objects/taxon1/ctreecont.hpp [new file with mode: 0644] blob
c++/src/objects/taxon1/local_taxon.cpp [new file with mode: 0644] blob
c++/src/objects/taxon1/taxon1.asn [new file with mode: 0644] blob
c++/src/objects/taxon1/taxon1.cpp [new file with mode: 0644] blob
c++/src/objects/taxon1/taxon1.def [new file with mode: 0644] blob
c++/src/objects/taxon1/taxon1.module [new file with mode: 0644] blob
c++/src/objects/taxon1/utils.cpp [new file with mode: 0644] blob
c++/src/objects/taxon3/CMakeLists.taxon3.asn.txt [new file with mode: 0644] blob
c++/src/objects/taxon3/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/taxon3/Makefile.in [new file with mode: 0644] blob
c++/src/objects/taxon3/Makefile.taxon3.lib [new file with mode: 0644] blob
c++/src/objects/taxon3/T3Data.cpp [new file with mode: 0644] blob
c++/src/objects/taxon3/cached_taxon3.cpp [new file with mode: 0755] blob
c++/src/objects/taxon3/taxon3.asn [new file with mode: 0644] blob
c++/src/objects/taxon3/taxon3.cpp [new file with mode: 0644] blob
c++/src/objects/taxon3/taxon3.def [new file with mode: 0644] blob
c++/src/objects/taxon3/taxon3.module [new file with mode: 0644] blob
c++/src/objects/tinyseq/CMakeLists.tinyseq.asn.txt [new file with mode: 0644] blob
c++/src/objects/tinyseq/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/tinyseq/Makefile.in [new file with mode: 0644] blob
c++/src/objects/tinyseq/Makefile.tinyseq.lib [new file with mode: 0644] blob
c++/src/objects/tinyseq/tinyseq.asn [new file with mode: 0644] blob
c++/src/objects/tinyseq/tinyseq.def [new file with mode: 0644] blob
c++/src/objects/tinyseq/tinyseq.module [new file with mode: 0644] blob
c++/src/objects/trackmgr/CMakeLists.trackmgr.asn.txt [new file with mode: 0644] blob
c++/src/objects/trackmgr/CMakeLists.trackmgrcli.lib.txt [new file with mode: 0644] blob
c++/src/objects/trackmgr/CMakeLists.trackmgrgridcli.lib.txt [new file with mode: 0644] blob
c++/src/objects/trackmgr/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/trackmgr/Makefile.in [new file with mode: 0644] blob
c++/src/objects/trackmgr/Makefile.trackmgr.lib [new file with mode: 0644] blob
c++/src/objects/trackmgr/Makefile.trackmgrcli.lib [new file with mode: 0644] blob
c++/src/objects/trackmgr/Makefile.trackmgrgridcli.lib [new file with mode: 0644] blob
c++/src/objects/trackmgr/TMgr_AnnotCounts.cpp [new file with mode: 0644] blob
c++/src/objects/trackmgr/TMgr_ClientInfo.cpp [new file with mode: 0644] blob
c++/src/objects/trackmgr/TMgr_DisplayTrackRequest.cpp [new file with mode: 0644] blob
c++/src/objects/trackmgr/TMgr_IdentityId.cpp [new file with mode: 0644] blob
c++/src/objects/trackmgr/TMgr_ItemResolverRequest.cpp [new file with mode: 0644] blob
c++/src/objects/trackmgr/TMgr_LengthStats.cpp [new file with mode: 0644] blob
c++/src/objects/trackmgr/TMgr_Message.cpp [new file with mode: 0644] blob
c++/src/objects/trackmgr/TMgr_PositionStats.cpp [new file with mode: 0644] blob
c++/src/objects/trackmgr/TMgr_Request.cpp [new file with mode: 0644] blob
c++/src/objects/trackmgr/blast_client.cpp [new file with mode: 0644] blob
c++/src/objects/trackmgr/createremotetrack_client.cpp [new file with mode: 0644] blob
c++/src/objects/trackmgr/createtrackset_client.cpp [new file with mode: 0644] blob
c++/src/objects/trackmgr/createusertrack_client.cpp [new file with mode: 0644] blob
c++/src/objects/trackmgr/displaytrack_client.cpp [new file with mode: 0644] blob
c++/src/objects/trackmgr/item_resolver_client.cpp [new file with mode: 0644] blob
c++/src/objects/trackmgr/removeusertrack_client.cpp [new file with mode: 0644] blob
c++/src/objects/trackmgr/supported_assemblies_client.cpp [new file with mode: 0644] blob
c++/src/objects/trackmgr/switch_context_client.cpp [new file with mode: 0644] blob
c++/src/objects/trackmgr/tms_exception.cpp [new file with mode: 0644] blob
c++/src/objects/trackmgr/track_attrvalue_client.cpp [new file with mode: 0644] blob
c++/src/objects/trackmgr/trackmgr.asn [new file with mode: 0644] blob
c++/src/objects/trackmgr/trackmgr.def [new file with mode: 0644] blob
c++/src/objects/trackmgr/trackmgr.module [new file with mode: 0644] blob
c++/src/objects/trackmgr/trackmgr_client.cpp [new file with mode: 0644] blob
c++/src/objects/trackmgr/trackset_client.cpp [new file with mode: 0644] blob
c++/src/objects/valerr/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/valerr/CMakeLists.valerr.asn.txt [new file with mode: 0644] blob
c++/src/objects/valerr/Makefile.in [new file with mode: 0644] blob
c++/src/objects/valerr/Makefile.valerr.lib [new file with mode: 0644] blob
c++/src/objects/valerr/ValidErrItem.cpp [new file with mode: 0644] blob
c++/src/objects/valerr/ValidError.cpp [new file with mode: 0644] blob
c++/src/objects/valerr/valerr.asn [new file with mode: 0644] blob
c++/src/objects/valerr/valerr.def [new file with mode: 0644] blob
c++/src/objects/valerr/valerr.module [new file with mode: 0644] blob
c++/src/objects/valid/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/valid/CMakeLists.valid.asn.txt [new file with mode: 0644] blob
c++/src/objects/valid/Comment_rule.cpp [new file with mode: 0644] blob
c++/src/objects/valid/Comment_set.cpp [new file with mode: 0644] blob
c++/src/objects/valid/Dependent_field_rule.cpp [new file with mode: 0644] blob
c++/src/objects/valid/Field_rule.cpp [new file with mode: 0644] blob
c++/src/objects/valid/Makefile.in [new file with mode: 0644] blob
c++/src/objects/valid/Makefile.valid.lib [new file with mode: 0644] blob
c++/src/objects/valid/valid.asn [new file with mode: 0644] blob
c++/src/objects/valid/valid.def [new file with mode: 0644] blob
c++/src/objects/valid/valid.module [new file with mode: 0644] blob
c++/src/objects/valid/validrules.inc [new file with mode: 0644] blob
c++/src/objects/valid/validrules.prt [new file with mode: 0644] blob
c++/src/objects/variation/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/variation/CMakeLists.variation.asn.txt [new file with mode: 0644] blob
c++/src/objects/variation/Makefile.in [new file with mode: 0644] blob
c++/src/objects/variation/Makefile.variation.lib [new file with mode: 0644] blob
c++/src/objects/variation/Variation.cpp [new file with mode: 0644] blob
c++/src/objects/variation/variation.asn [new file with mode: 0644] blob
c++/src/objects/variation/variation.def [new file with mode: 0644] blob
c++/src/objects/variation/variation.module [new file with mode: 0644] blob
c++/src/objects/variation_libs/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/variation_libs/Makefile.in [new file with mode: 0644] blob
c++/src/objects/variation_libs/dbsnp/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/variation_libs/dbsnp/Makefile.in [new file with mode: 0644] blob
c++/src/objects/variation_libs/dbsnp/search_by_rsid/CMakeLists.search_by_rsid.asn.txt [new file with mode: 0644] blob
c++/src/objects/variation_libs/dbsnp/search_by_rsid/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/variation_libs/dbsnp/search_by_rsid/Makefile.in [new file with mode: 0644] blob
c++/src/objects/variation_libs/dbsnp/search_by_rsid/Makefile.search_by_rsid.lib [new file with mode: 0644] blob
c++/src/objects/variation_libs/dbsnp/search_by_rsid/search_by_rsid.asn [new file with mode: 0644] blob
c++/src/objects/variation_libs/dbsnp/search_by_rsid/search_by_rsid.module [new file with mode: 0644] blob
c++/src/objects/variation_libs/dbsnp/tooltip_service/CMakeLists.dbsnp_tooltip_service.asn.txt [new file with mode: 0644] blob
c++/src/objects/variation_libs/dbsnp/tooltip_service/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/variation_libs/dbsnp/tooltip_service/Makefile.dbsnp_tooltip_service.lib [new file with mode: 0644] blob
c++/src/objects/variation_libs/dbsnp/tooltip_service/Makefile.in [new file with mode: 0644] blob
c++/src/objects/variation_libs/dbsnp/tooltip_service/dbsnp_tooltip_service.asn [new file with mode: 0644] blob
c++/src/objects/variation_libs/dbsnp/tooltip_service/dbsnp_tooltip_service.module [new file with mode: 0644] blob
c++/src/objects/varrep/AaInterval.cpp [new file with mode: 0644] blob
c++/src/objects/varrep/AaLocation.cpp [new file with mode: 0644] blob
c++/src/objects/varrep/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objects/varrep/CMakeLists.varrep.asn.txt [new file with mode: 0644] blob
c++/src/objects/varrep/Makefile.in [new file with mode: 0644] blob
c++/src/objects/varrep/Makefile.varrep.lib [new file with mode: 0644] blob
c++/src/objects/varrep/varrep.asn [new file with mode: 0644] blob
c++/src/objects/varrep/varrep.def [new file with mode: 0644] blob
c++/src/objects/varrep/varrep.module [new file with mode: 0644] blob
c++/src/objmgr/CMakeLists.objmgr.lib.txt [new file with mode: 0644] blob
c++/src/objmgr/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objmgr/Makefile.in [new file with mode: 0644] blob
c++/src/objmgr/Makefile.objmgr.lib [new file with mode: 0644] blob
c++/src/objmgr/align_ci.cpp [new file with mode: 0644] blob
c++/src/objmgr/annot_ci.cpp [new file with mode: 0644] blob
c++/src/objmgr/annot_collector.cpp [new file with mode: 0644] blob
c++/src/objmgr/annot_finder.cpp [new file with mode: 0644] blob
c++/src/objmgr/annot_object.cpp [new file with mode: 0644] blob
c++/src/objmgr/annot_object_index.cpp [new file with mode: 0644] blob
c++/src/objmgr/annot_selector.cpp [new file with mode: 0644] blob
c++/src/objmgr/annot_type_index.cpp [new file with mode: 0644] blob
c++/src/objmgr/annot_types_ci.cpp [new file with mode: 0644] blob
c++/src/objmgr/bioseq_base_info.cpp [new file with mode: 0644] blob
c++/src/objmgr/bioseq_ci.cpp [new file with mode: 0644] blob
c++/src/objmgr/bioseq_edit_commands.cpp [new file with mode: 0644] blob
c++/src/objmgr/bioseq_handle.cpp [new file with mode: 0644] blob
c++/src/objmgr/bioseq_info.cpp [new file with mode: 0644] blob
c++/src/objmgr/bioseq_set_edit_commands.cpp [new file with mode: 0644] blob
c++/src/objmgr/bioseq_set_handle.cpp [new file with mode: 0644] blob
c++/src/objmgr/bioseq_set_info.cpp [new file with mode: 0644] blob
c++/src/objmgr/data_loader.cpp [new file with mode: 0644] blob
c++/src/objmgr/data_loader_factory.cpp [new file with mode: 0644] blob
c++/src/objmgr/data_source.cpp [new file with mode: 0644] blob
c++/src/objmgr/edit_commands_impl.cpp [new file with mode: 0644] blob
c++/src/objmgr/edit_saver.cpp [new file with mode: 0644] blob
c++/src/objmgr/edits_db_engine.cpp [new file with mode: 0644] blob
c++/src/objmgr/edits_db_saver.cpp [new file with mode: 0644] blob
c++/src/objmgr/feat_ci.cpp [new file with mode: 0644] blob
c++/src/objmgr/gc_assembly_parser.cpp [new file with mode: 0644] blob
c++/src/objmgr/graph_ci.cpp [new file with mode: 0644] blob
c++/src/objmgr/handle_range.cpp [new file with mode: 0644] blob
c++/src/objmgr/handle_range_map.cpp [new file with mode: 0644] blob
c++/src/objmgr/heap_scope.cpp [new file with mode: 0644] blob
c++/src/objmgr/mapped_feat.cpp [new file with mode: 0644] blob
c++/src/objmgr/object_manager.cpp [new file with mode: 0644] blob
c++/src/objmgr/objmgr_exception.cpp [new file with mode: 0644] blob
c++/src/objmgr/prefetch_actions.cpp [new file with mode: 0644] blob
c++/src/objmgr/prefetch_impl.cpp [new file with mode: 0644] blob
c++/src/objmgr/prefetch_manager.cpp [new file with mode: 0644] blob
c++/src/objmgr/prefetch_manager_impl.cpp [new file with mode: 0644] blob
c++/src/objmgr/priority.cpp [new file with mode: 0644] blob
c++/src/objmgr/scope.cpp [new file with mode: 0644] blob
c++/src/objmgr/scope_impl.cpp [new file with mode: 0644] blob
c++/src/objmgr/scope_info.cpp [new file with mode: 0644] blob
c++/src/objmgr/scope_transaction.cpp [new file with mode: 0644] blob
c++/src/objmgr/scope_transaction_impl.cpp [new file with mode: 0644] blob
c++/src/objmgr/seq_align_handle.cpp [new file with mode: 0644] blob
c++/src/objmgr/seq_align_mapper.cpp [new file with mode: 0644] blob
c++/src/objmgr/seq_annot_ci.cpp [new file with mode: 0644] blob
c++/src/objmgr/seq_annot_handle.cpp [new file with mode: 0644] blob
c++/src/objmgr/seq_annot_info.cpp [new file with mode: 0644] blob
c++/src/objmgr/seq_descr_ci.cpp [new file with mode: 0644] blob
c++/src/objmgr/seq_entry_ci.cpp [new file with mode: 0644] blob
c++/src/objmgr/seq_entry_edit_commands.cpp [new file with mode: 0644] blob
c++/src/objmgr/seq_entry_handle.cpp [new file with mode: 0644] blob
c++/src/objmgr/seq_entry_info.cpp [new file with mode: 0644] blob
c++/src/objmgr/seq_feat_handle.cpp [new file with mode: 0644] blob
c++/src/objmgr/seq_graph_handle.cpp [new file with mode: 0644] blob
c++/src/objmgr/seq_id_sort.cpp [new file with mode: 0644] blob
c++/src/objmgr/seq_loc_cvt.cpp [new file with mode: 0644] blob
c++/src/objmgr/seq_loc_mapper.cpp [new file with mode: 0644] blob
c++/src/objmgr/seq_map.cpp [new file with mode: 0644] blob
c++/src/objmgr/seq_map_ci.cpp [new file with mode: 0644] blob
c++/src/objmgr/seq_map_switch.cpp [new file with mode: 0644] blob
c++/src/objmgr/seq_table_ci.cpp [new file with mode: 0644] blob
c++/src/objmgr/seq_table_info.cpp [new file with mode: 0644] blob
c++/src/objmgr/seq_table_setters.cpp [new file with mode: 0644] blob
c++/src/objmgr/seq_vector.cpp [new file with mode: 0644] blob
c++/src/objmgr/seq_vector_ci.cpp [new file with mode: 0644] blob
c++/src/objmgr/seqdesc_ci.cpp [new file with mode: 0644] blob
c++/src/objmgr/snp_annot_info.cpp [new file with mode: 0644] blob
c++/src/objmgr/split/CMakeLists.id2_split.lib.txt [new file with mode: 0644] blob
c++/src/objmgr/split/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objmgr/split/Makefile.id2_split.lib [new file with mode: 0644] blob
c++/src/objmgr/split/Makefile.in [new file with mode: 0644] blob
c++/src/objmgr/split/annot_piece.cpp [new file with mode: 0644] blob
c++/src/objmgr/split/asn_sizer.cpp [new file with mode: 0644] blob
c++/src/objmgr/split/blob_splitter.cpp [new file with mode: 0644] blob
c++/src/objmgr/split/blob_splitter_impl.cpp [new file with mode: 0644] blob
c++/src/objmgr/split/blob_splitter_maker.cpp [new file with mode: 0644] blob
c++/src/objmgr/split/blob_splitter_params.cpp [new file with mode: 0644] blob
c++/src/objmgr/split/blob_splitter_parser.cpp [new file with mode: 0644] blob
c++/src/objmgr/split/chunk_info.cpp [new file with mode: 0644] blob
c++/src/objmgr/split/id_range.cpp [new file with mode: 0644] blob
c++/src/objmgr/split/object_splitinfo.cpp [new file with mode: 0644] blob
c++/src/objmgr/split/size.cpp [new file with mode: 0644] blob
c++/src/objmgr/split/split_blob.cpp [new file with mode: 0644] blob
c++/src/objmgr/split/split_exceptions.cpp [new file with mode: 0644] blob
c++/src/objmgr/split_parser.cpp [new file with mode: 0644] blob
c++/src/objmgr/table_field.cpp [new file with mode: 0644] blob
c++/src/objmgr/tse_assigner.cpp [new file with mode: 0644] blob
c++/src/objmgr/tse_chunk_info.cpp [new file with mode: 0644] blob
c++/src/objmgr/tse_handle.cpp [new file with mode: 0644] blob
c++/src/objmgr/tse_info.cpp [new file with mode: 0644] blob
c++/src/objmgr/tse_info_object.cpp [new file with mode: 0644] blob
c++/src/objmgr/tse_split_info.cpp [new file with mode: 0644] blob
c++/src/objmgr/unsupp_editsaver.cpp [new file with mode: 0644] blob
c++/src/objmgr/util/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objmgr/util/CMakeLists.util.lib.txt [new file with mode: 0644] blob
c++/src/objmgr/util/Makefile.in [new file with mode: 0644] blob
c++/src/objmgr/util/Makefile.util.lib [new file with mode: 0644] blob
c++/src/objmgr/util/autodef.cpp [new file with mode: 0644] blob
c++/src/objmgr/util/autodef_available_modifier.cpp [new file with mode: 0644] blob
c++/src/objmgr/util/autodef_feature_clause.cpp [new file with mode: 0644] blob
c++/src/objmgr/util/autodef_feature_clause_base.cpp [new file with mode: 0644] blob
c++/src/objmgr/util/autodef_mod_combo.cpp [new file with mode: 0644] blob
c++/src/objmgr/util/autodef_options.cpp [new file with mode: 0644] blob
c++/src/objmgr/util/autodef_source_desc.cpp [new file with mode: 0644] blob
c++/src/objmgr/util/autodef_source_group.cpp [new file with mode: 0644] blob
c++/src/objmgr/util/bioseqgaps_ci.cpp [new file with mode: 0644] blob
c++/src/objmgr/util/create_defline.cpp [new file with mode: 0644] blob
c++/src/objmgr/util/feature.cpp [new file with mode: 0644] blob
c++/src/objmgr/util/feature_edit.cpp [new file with mode: 0644] blob
c++/src/objmgr/util/indexer.cpp [new file with mode: 0644] blob
c++/src/objmgr/util/obj_sniff.cpp [new file with mode: 0644] blob
c++/src/objmgr/util/objutil.cpp [new file with mode: 0644] blob
c++/src/objmgr/util/seq_align_util.cpp [new file with mode: 0644] blob
c++/src/objmgr/util/seq_loc_util.cpp [new file with mode: 0644] blob
c++/src/objmgr/util/seq_trimmer.cpp [new file with mode: 0644] blob
c++/src/objmgr/util/seqtitle.cpp [new file with mode: 0644] blob
c++/src/objmgr/util/sequence.cpp [new file with mode: 0644] blob
c++/src/objmgr/util/weight.cpp [new file with mode: 0644] blob
c++/src/objtools/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/align_format/CMakeLists.align_format.lib.txt [new file with mode: 0644] blob
c++/src/objtools/align_format/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/align_format/Makefile.align_format.lib [new file with mode: 0644] blob
c++/src/objtools/align_format/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/align_format/align_format_util.cpp [new file with mode: 0644] blob
c++/src/objtools/align_format/aln_printer.cpp [new file with mode: 0644] blob
c++/src/objtools/align_format/format_flags.cpp [new file with mode: 0644] blob
c++/src/objtools/align_format/seqalignfilter.cpp [new file with mode: 0644] blob
c++/src/objtools/align_format/showalign.cpp [new file with mode: 0644] blob
c++/src/objtools/align_format/showdefline.cpp [new file with mode: 0644] blob
c++/src/objtools/align_format/tabular.cpp [new file with mode: 0644] blob
c++/src/objtools/align_format/taxFormat.cpp [new file with mode: 0644] blob
c++/src/objtools/align_format/unit_test/CMakeLists.align_format_unit_test.app.txt [new file with mode: 0644] blob
c++/src/objtools/align_format/unit_test/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/align_format/unit_test/Makefile.align_format_unit_test.app [new file with mode: 0644] blob
c++/src/objtools/align_format/unit_test/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/align_format/unit_test/align_format_unit_test.ini [new file with mode: 0644] blob
c++/src/objtools/align_format/unit_test/aln_printer_unit_test.cpp [new file with mode: 0644] blob
c++/src/objtools/align_format/unit_test/blast_test_util.cpp [new file with mode: 0644] blob
c++/src/objtools/align_format/unit_test/blast_test_util.hpp [new file with mode: 0644] blob
c++/src/objtools/align_format/unit_test/data/blastn.vs.ecoli.asn [new file with mode: 0644] blob
c++/src/objtools/align_format/unit_test/data/in_showalign_aln [new file with mode: 0644] blob
c++/src/objtools/align_format/unit_test/data/in_showalign_use_this_gi.asn [new file with mode: 0644] blob
c++/src/objtools/align_format/unit_test/data/in_showalign_use_this_gi_ext.asn [new file with mode: 0755] blob
c++/src/objtools/align_format/unit_test/data/multialign.asn [new file with mode: 0644] blob
c++/src/objtools/align_format/unit_test/data/multialign_nucleotide.asn [new file with mode: 0644] blob
c++/src/objtools/align_format/unit_test/data/nucleotide.fa [new file with mode: 0644] blob
c++/src/objtools/align_format/unit_test/data/protein.fa [new file with mode: 0644] blob
c++/src/objtools/align_format/unit_test/data/query_w_metadata.blast_archive.asn [new file with mode: 0644] blob
c++/src/objtools/align_format/unit_test/data/seqalign.vectorscreen [new file with mode: 0644] blob
c++/src/objtools/align_format/unit_test/data/showdefline-cppunit.aln [new file with mode: 0644] blob
c++/src/objtools/align_format/unit_test/data/tabular_seqalignset.asn [new file with mode: 0644] blob
c++/src/objtools/align_format/unit_test/data/tabular_seqalignset_2.asn [new file with mode: 0644] blob
c++/src/objtools/align_format/unit_test/data/tabular_seqalignset_3.asn [new file with mode: 0644] blob
c++/src/objtools/align_format/unit_test/showalign_unit_test.cpp [new file with mode: 0644] blob
c++/src/objtools/align_format/unit_test/showdefline_unit_test.cpp [new file with mode: 0644] blob
c++/src/objtools/align_format/unit_test/tabularinof_unit_test.cpp [new file with mode: 0644] blob
c++/src/objtools/align_format/unit_test/vectorscreen_unit_test.cpp [new file with mode: 0644] blob
c++/src/objtools/align_format/vectorscreen.cpp [new file with mode: 0644] blob
c++/src/objtools/alnmgr/CMakeLists.alnmgr.lib.txt [new file with mode: 0644] blob
c++/src/objtools/alnmgr/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/alnmgr/Makefile.alnmgr.lib [new file with mode: 0644] blob
c++/src/objtools/alnmgr/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/alnmgr/aln_builders.cpp [new file with mode: 0644] blob
c++/src/objtools/alnmgr/aln_container.cpp [new file with mode: 0644] blob
c++/src/objtools/alnmgr/aln_converters.cpp [new file with mode: 0644] blob
c++/src/objtools/alnmgr/aln_generators.cpp [new file with mode: 0644] blob
c++/src/objtools/alnmgr/aln_seqid.cpp [new file with mode: 0644] blob
c++/src/objtools/alnmgr/aln_serial.cpp [new file with mode: 0644] blob
c++/src/objtools/alnmgr/alndiag.cpp [new file with mode: 0644] blob
c++/src/objtools/alnmgr/alnmap.cpp [new file with mode: 0644] blob
c++/src/objtools/alnmgr/alnmapprint.cpp [new file with mode: 0644] blob
c++/src/objtools/alnmgr/alnmatch.cpp [new file with mode: 0644] blob
c++/src/objtools/alnmgr/alnmerger.cpp [new file with mode: 0644] blob
c++/src/objtools/alnmgr/alnmix.cpp [new file with mode: 0644] blob
c++/src/objtools/alnmgr/alnpos_ci.cpp [new file with mode: 0644] blob
c++/src/objtools/alnmgr/alnsegments.cpp [new file with mode: 0644] blob
c++/src/objtools/alnmgr/alnseq.cpp [new file with mode: 0644] blob
c++/src/objtools/alnmgr/alntext.cpp [new file with mode: 0644] blob
c++/src/objtools/alnmgr/alnvec.cpp [new file with mode: 0644] blob
c++/src/objtools/alnmgr/alnvec_iterator.cpp [new file with mode: 0644] blob
c++/src/objtools/alnmgr/alnvecprint.cpp [new file with mode: 0644] blob
c++/src/objtools/alnmgr/pairwise_aln.cpp [new file with mode: 0644] blob
c++/src/objtools/alnmgr/score_builder_base.cpp [new file with mode: 0644] blob
c++/src/objtools/alnmgr/sparse_aln.cpp [new file with mode: 0644] blob
c++/src/objtools/alnmgr/sparse_ci.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/blast/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/CMakeLists.blastdb_format.lib.txt [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/Makefile.blastdb_format.lib [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/blastdb_formatter.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/seq_formatter.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/seq_writer.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/unit_test/CMakeLists.blastdb_format_unit_test.app.txt [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/unit_test/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/unit_test/Makefile.blastdb_format_unit_test.app [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/unit_test/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/unit_test/data/mask-data-db.paa [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/unit_test/data/mask-data-db.pab [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/unit_test/data/mask-data-db.pac [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/unit_test/data/mask-data-db.phr [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/unit_test/data/mask-data-db.pin [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/unit_test/data/mask-data-db.pnd [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/unit_test/data/mask-data-db.pni [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/unit_test/data/mask-data-db.psd [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/unit_test/data/mask-data-db.psi [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/unit_test/data/mask-data-db.psq [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/unit_test/data/pdb_ids.test [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/unit_test/data/seqp.phd [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/unit_test/data/seqp.phi [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/unit_test/data/seqp.phr [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/unit_test/data/seqp.pin [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/unit_test/data/seqp.pnd [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/unit_test/data/seqp.pni [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/unit_test/data/seqp.psd [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/unit_test/data/seqp.psi [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/unit_test/data/seqp.psq [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/unit_test/data/test_pdb_v5.pdb [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/unit_test/data/test_pdb_v5.phr [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/unit_test/data/test_pdb_v5.pin [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/unit_test/data/test_pdb_v5.pog [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/unit_test/data/test_pdb_v5.pos [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/unit_test/data/test_pdb_v5.pot [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/unit_test/data/test_pdb_v5.psq [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/unit_test/data/test_pdb_v5.ptf [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/unit_test/data/test_pdb_v5.pto [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/unit_test/seq_formatter_unit_test.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/gene_info_reader/CMakeLists.gene_info.lib.txt [new file with mode: 0644] blob
c++/src/objtools/blast/gene_info_reader/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/blast/gene_info_reader/Makefile.gene_info.lib [new file with mode: 0644] blob
c++/src/objtools/blast/gene_info_reader/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/blast/gene_info_reader/demo/CMakeLists.gene_info_reader.app.txt [new file with mode: 0644] blob
c++/src/objtools/blast/gene_info_reader/demo/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/blast/gene_info_reader/demo/Makefile.gene_info_reader.app [new file with mode: 0644] blob
c++/src/objtools/blast/gene_info_reader/demo/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/blast/gene_info_reader/demo/gene_info_reader_app.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/gene_info_reader/file_utils.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/gene_info_reader/gene_info.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/gene_info_reader/gene_info_reader.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/gene_info_reader/unit_test/CMakeLists.gene_info_unit_test.app.txt [new file with mode: 0644] blob
c++/src/objtools/blast/gene_info_reader/unit_test/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/blast/gene_info_reader/unit_test/Makefile.gene_info_unit_test.app [new file with mode: 0644] blob
c++/src/objtools/blast/gene_info_reader/unit_test/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/blast/gene_info_reader/unit_test/data/geneinfo.dat [new file with mode: 0644] blob
c++/src/objtools/blast/gene_info_reader/unit_test/data/geneinfo.g2i [new file with mode: 0644] blob
c++/src/objtools/blast/gene_info_reader/unit_test/data/geneinfo.g2o [new file with mode: 0644] blob
c++/src/objtools/blast/gene_info_reader/unit_test/data/geneinfo.i2g [new file with mode: 0644] blob
c++/src/objtools/blast/gene_info_reader/unit_test/data/geneinfo.i2o [new file with mode: 0644] blob
c++/src/objtools/blast/gene_info_reader/unit_test/gene_info_test.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/gene_info_reader/unit_test/gene_info_unit_test.ini [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/CMakeLists.seqdb.lib.txt [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/Makefile.seqdb.lib [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/SeqDB-design-1.sxi [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/alias_files.txt [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/blastdbv5_files.txt [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/column_files.txt [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/configuration.txt [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/demo/CMakeLists.seqdb_demo.app.txt [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/demo/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/demo/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/demo/Makefile.seqdb_demo.app [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/demo/seqdb_demo.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/future_ideas.txt [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/gi_based_mask.txt [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/header_files.txt [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/index_files.txt [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/isam_files.txt [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/mask_column.txt [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/seqdb.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/seqdb_lmdb.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/seqdbalias.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/seqdbalias.hpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/seqdbbitset.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/seqdbbitset.hpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/seqdbblob.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/seqdbcol.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/seqdbexpert.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/seqdbfile.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/seqdbfilter.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/seqdbfilter.hpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/seqdbgilistset.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/seqdbgilistset.hpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/seqdbgimask.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/seqdbgimask.hpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/seqdbimpl.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/seqdbimpl.hpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/seqdblmdbset.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/seqdblmdbset.hpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/seqdbobj.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/seqdboidlist.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/seqdboidlist.hpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/seqdbtax.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/seqdbvolset.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/seqdbvolset.hpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/seqidlist_reader.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/sequence_files.txt [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/test/CMakeLists.seqdb_perf.app.txt [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/test/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/test/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/test/Makefile.seqdb_perf.app [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/CMakeLists.writedb.lib.txt [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/Makefile.writedb.lib [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/build-alias-index [new file with mode: 0755] blob
c++/src/objtools/blast/seqdb_writer/build_db.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/criteria.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/mask_info_registry.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/mask_info_registry.hpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/multisource_util.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/seqidlist_writer.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/taxid_set.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/CMakeLists.writedb_lmdb_unit_test.app.txt [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/CMakeLists.writedb_unit_test.app.txt [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/Makefile.writedb_lmdb_unit_test.app [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/Makefile.writedb_unit_test.app [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/criteria_unit_test.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/AXBT01000003.asn [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/WP_009685663.fasta [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/a4WZJ.ASN1 [new file with mode: 0755] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/a4WZJ.ids [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/a5AJ4.ASN1 [new file with mode: 0755] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/a5AJ4.ids [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/gi129295.asn [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/gi129296.asn [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/lclseqs.fsa [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/lclseqs_taxidmap.txt [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/pdb_ids.ref [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/pdbs.fasta [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/rabbit_mrna.fsa [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/rabbit_taxidmap.txt [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/redundant_deflines.asn [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/seqidlist.nucl [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/some_prots.fsa [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/writedb_nucl.nhr [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/writedb_nucl.nin [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/writedb_nucl.nnd [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/writedb_nucl.nni [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/writedb_nucl.nog [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/writedb_nucl.nsd [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/writedb_nucl.nsi [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/writedb_nucl.nsq [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/writedb_nucl_v5.ndb [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/writedb_nucl_v5.ndb-lock [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/writedb_nucl_v5.nhr [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/writedb_nucl_v5.nin [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/writedb_nucl_v5.nnd [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/writedb_nucl_v5.nni [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/writedb_nucl_v5.nog [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/writedb_nucl_v5.nos [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/writedb_nucl_v5.not [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/writedb_nucl_v5.nsq [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/writedb_nucl_v5.ntf [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/writedb_nucl_v5.ntf-lock [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/writedb_nucl_v5.nto [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/writedb_prot.phr [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/writedb_prot.pin [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/writedb_prot.pnd [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/writedb_prot.pni [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/writedb_prot.pog [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/writedb_prot.psd [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/writedb_prot.psi [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/data/writedb_prot.psq [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/writedb_lmdb_unit_test.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.ini [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/writedb.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/writedb_column.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/writedb_column.hpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/writedb_convert.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/writedb_files.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/writedb_general.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/writedb_gimask.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/writedb_gimask.hpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/writedb_impl.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/writedb_impl.hpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/writedb_isam.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/writedb_lmdb.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/writedb_volume.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/seqdb_writer/writedb_volume.hpp [new file with mode: 0644] blob
c++/src/objtools/blast/services/CMakeLists.blast_services.lib.txt [new file with mode: 0644] blob
c++/src/objtools/blast/services/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/blast/services/Makefile.blast_services.lib [new file with mode: 0644] blob
c++/src/objtools/blast/services/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/blast/services/blast_services.cpp [new file with mode: 0644] blob
c++/src/objtools/blast/services/unit_test/CMakeLists.blast_services_unit_test.app.txt [new file with mode: 0644] blob
c++/src/objtools/blast/services/unit_test/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/blast/services/unit_test/Makefile.blast_services_unit_test.app [new file with mode: 0644] blob
c++/src/objtools/blast/services/unit_test/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/blast/services/unit_test/blast_services_test.cpp [new file with mode: 0644] blob
c++/src/objtools/cleanup/CMakeLists.cleanup.lib.txt [new file with mode: 0644] blob
c++/src/objtools/cleanup/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/cleanup/Makefile.cleanup.lib [new file with mode: 0644] blob
c++/src/objtools/cleanup/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/cleanup/autogenerated_cleanup.cpp [new file with mode: 0644] blob
c++/src/objtools/cleanup/autogenerated_cleanup.hpp [new file with mode: 0644] blob
c++/src/objtools/cleanup/autogenerated_cleanup.sh [new file with mode: 0755] blob
c++/src/objtools/cleanup/autogenerated_cleanup.txt [new file with mode: 0644] blob
c++/src/objtools/cleanup/autogenerated_cleanup_extra.hpp [new file with mode: 0644] blob
c++/src/objtools/cleanup/autogenerated_extended_cleanup.cpp [new file with mode: 0644] blob
c++/src/objtools/cleanup/autogenerated_extended_cleanup.hpp [new file with mode: 0644] blob
c++/src/objtools/cleanup/autogenerated_extended_cleanup.sh [new file with mode: 0755] blob
c++/src/objtools/cleanup/autogenerated_extended_cleanup.txt [new file with mode: 0644] blob
c++/src/objtools/cleanup/capitalization_string.cpp [new file with mode: 0644] blob
c++/src/objtools/cleanup/cleanup.cpp [new file with mode: 0644] blob
c++/src/objtools/cleanup/cleanup_author.cpp [new file with mode: 0644] blob
c++/src/objtools/cleanup/cleanup_message.cpp [new file with mode: 0644] blob
c++/src/objtools/cleanup/cleanup_pub.cpp [new file with mode: 0644] blob
c++/src/objtools/cleanup/cleanup_user_object.cpp [new file with mode: 0644] blob
c++/src/objtools/cleanup/cleanup_utils.cpp [new file with mode: 0644] blob
c++/src/objtools/cleanup/cleanup_utils.hpp [new file with mode: 0644] blob
c++/src/objtools/cleanup/fix_feature_id.cpp [new file with mode: 0644] blob
c++/src/objtools/cleanup/gene_qual_normalization.cpp [new file with mode: 0644] blob
c++/src/objtools/cleanup/newcleanupp.cpp [new file with mode: 0644] blob
c++/src/objtools/cleanup/newcleanupp.hpp [new file with mode: 0644] blob
c++/src/objtools/data_loaders/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/data_loaders/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/data_loaders/blastdb/CMakeLists.ncbi_xloader_blastdb.lib.txt [new file with mode: 0644] blob
c++/src/objtools/data_loaders/blastdb/CMakeLists.ncbi_xloader_blastdb_rmt.lib.txt [new file with mode: 0644] blob
c++/src/objtools/data_loaders/blastdb/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/data_loaders/blastdb/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/data_loaders/blastdb/Makefile.ncbi_xloader_blastdb.lib [new file with mode: 0644] blob
c++/src/objtools/data_loaders/blastdb/Makefile.ncbi_xloader_blastdb_rmt.lib [new file with mode: 0644] blob
c++/src/objtools/data_loaders/blastdb/bdbloader.cpp [new file with mode: 0644] blob
c++/src/objtools/data_loaders/blastdb/bdbloader_rmt.cpp [new file with mode: 0644] blob
c++/src/objtools/data_loaders/blastdb/cached_sequence.cpp [new file with mode: 0644] blob
c++/src/objtools/data_loaders/blastdb/cached_sequence.hpp [new file with mode: 0644] blob
c++/src/objtools/data_loaders/blastdb/local_blastdb_adapter.cpp [new file with mode: 0644] blob
c++/src/objtools/data_loaders/blastdb/local_blastdb_adapter.hpp [new file with mode: 0644] blob
c++/src/objtools/data_loaders/blastdb/remote_blastdb_adapter.cpp [new file with mode: 0644] blob
c++/src/objtools/data_loaders/blastdb/remote_blastdb_adapter.hpp [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/CMakeLists.ncbi_xloader_genbank.lib.txt [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/CMakeLists.ncbi_xreader.lib.txt [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/Makefile.ncbi_xloader_genbank.lib [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/Makefile.ncbi_xloader_genbank.mk [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/Makefile.ncbi_xreader.lib [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/blob_id.cpp [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/cache/CMakeLists.ncbi_xreader_cache.lib.txt [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/cache/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/cache/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/cache/Makefile.ncbi_xreader_cache.lib [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/cache/writer_cache.cpp [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/dispatcher.cpp [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/gbload_util.cpp [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/gbloader.cpp [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/gbnative.cpp [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/gicache/CMakeLists.ncbi_xreader_gicache.lib.txt [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/gicache/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/gicache/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/gicache/Makefile.ncbi_xreader_gicache.lib [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/gicache/gicache.c [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/gicache/gicache.h [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/gicache/ncbi_toolkit.h [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/gicache/reader_gicache.cpp [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/id1/CMakeLists.ncbi_xreader_id1.lib.txt [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/id1/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/id1/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/id1/Makefile.ncbi_xreader_id1.lib [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/id1/reader_id1.cpp [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/id2/CMakeLists.ncbi_xreader_id2.lib.txt [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/id2/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/id2/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/id2/Makefile.ncbi_xreader_id2.lib [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/incr_time.cpp [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/info_cache.cpp [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/processors.cpp [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/psg_loader.cpp [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/psg_loader_impl.cpp [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/reader.cpp [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/reader_id1_base.cpp [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/reader_id2_base.cpp [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/reader_service.cpp [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/reader_snp.cpp [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/request_result.cpp [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/seqref.cpp [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/wgsmaster.cpp [new file with mode: 0644] blob
c++/src/objtools/data_loaders/genbank/writer.cpp [new file with mode: 0644] blob
c++/src/objtools/edit/CMakeLists.edit.lib.txt [new file with mode: 0644] blob
c++/src/objtools/edit/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/edit/Makefile.edit.lib [new file with mode: 0644] blob
c++/src/objtools/edit/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/edit/apply_object.cpp [new file with mode: 0644] blob
c++/src/objtools/edit/autodef_with_tax.cpp [new file with mode: 0644] blob
c++/src/objtools/edit/cds_fix.cpp [new file with mode: 0644] blob
c++/src/objtools/edit/dblink_field.cpp [new file with mode: 0644] blob
c++/src/objtools/edit/external_annots.cpp [new file with mode: 0644] blob
c++/src/objtools/edit/feattable_edit.cpp [new file with mode: 0644] blob
c++/src/objtools/edit/feature_propagate.cpp [new file with mode: 0644] blob
c++/src/objtools/edit/field_handler.cpp [new file with mode: 0644] blob
c++/src/objtools/edit/gap_trim.cpp [new file with mode: 0644] blob
c++/src/objtools/edit/gaps_edit.cpp [new file with mode: 0644] blob
c++/src/objtools/edit/gb_block_field.cpp [new file with mode: 0644] blob
c++/src/objtools/edit/gene_utils.cpp [new file with mode: 0644] blob
c++/src/objtools/edit/link_cds_mrna.cpp [new file with mode: 0755] blob
c++/src/objtools/edit/loc_edit.cpp [new file with mode: 0644] blob
c++/src/objtools/edit/mail_report.cpp [new file with mode: 0644] blob
c++/src/objtools/edit/parse_text_options.cpp [new file with mode: 0644] blob
c++/src/objtools/edit/promote.cpp [new file with mode: 0644] blob
c++/src/objtools/edit/pub_fix.cpp [new file with mode: 0644] blob
c++/src/objtools/edit/pub_fix_aux.hpp [new file with mode: 0644] blob
c++/src/objtools/edit/publication_edit.cpp [new file with mode: 0644] blob
c++/src/objtools/edit/remote_updater.cpp [new file with mode: 0644] blob
c++/src/objtools/edit/rna_edit.cpp [new file with mode: 0755] blob
c++/src/objtools/edit/seq_edit.cpp [new file with mode: 0644] blob
c++/src/objtools/edit/seq_entry_edit.cpp [new file with mode: 0644] blob
c++/src/objtools/edit/seqid_guesser.cpp [new file with mode: 0644] blob
c++/src/objtools/edit/source_edit.cpp [new file with mode: 0644] blob
c++/src/objtools/edit/string_constraint.cpp [new file with mode: 0644] blob
c++/src/objtools/edit/struc_comm_field.cpp [new file with mode: 0644] blob
c++/src/objtools/edit/text_desc_field.cpp [new file with mode: 0644] blob
c++/src/objtools/edit/text_object_description.cpp [new file with mode: 0644] blob
c++/src/objtools/eutils/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/eutils/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/eutils/api/CMakeLists.eutils.lib.txt [new file with mode: 0644] blob
c++/src/objtools/eutils/api/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/eutils/api/Makefile.eutils.lib [new file with mode: 0644] blob
c++/src/objtools/eutils/api/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/eutils/api/efetch.cpp [new file with mode: 0644] blob
c++/src/objtools/eutils/api/egquery.cpp [new file with mode: 0644] blob
c++/src/objtools/eutils/api/ehistory.cpp [new file with mode: 0644] blob
c++/src/objtools/eutils/api/einfo.cpp [new file with mode: 0644] blob
c++/src/objtools/eutils/api/elink.cpp [new file with mode: 0644] blob
c++/src/objtools/eutils/api/epost.cpp [new file with mode: 0644] blob
c++/src/objtools/eutils/api/esearch.cpp [new file with mode: 0644] blob
c++/src/objtools/eutils/api/espell.cpp [new file with mode: 0644] blob
c++/src/objtools/eutils/api/esummary.cpp [new file with mode: 0644] blob
c++/src/objtools/eutils/api/eutils.cpp [new file with mode: 0644] blob
c++/src/objtools/eutils/egquery/CMakeLists.egquery.asn.txt [new file with mode: 0644] blob
c++/src/objtools/eutils/egquery/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/eutils/egquery/Makefile.egquery.lib [new file with mode: 0644] blob
c++/src/objtools/eutils/egquery/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/eutils/egquery/egquery.def [new file with mode: 0644] blob
c++/src/objtools/eutils/egquery/egquery.dtd [new file with mode: 0644] blob
c++/src/objtools/eutils/ehistory/CMakeLists.ehistory.asn.txt [new file with mode: 0644] blob
c++/src/objtools/eutils/ehistory/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/eutils/ehistory/Makefile.ehistory.lib [new file with mode: 0644] blob
c++/src/objtools/eutils/ehistory/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/eutils/ehistory/ehistory.def [new file with mode: 0644] blob
c++/src/objtools/eutils/ehistory/ehistory.dtd [new file with mode: 0644] blob
c++/src/objtools/eutils/einfo/CMakeLists.einfo.asn.txt [new file with mode: 0644] blob
c++/src/objtools/eutils/einfo/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/eutils/einfo/Makefile.einfo.lib [new file with mode: 0644] blob
c++/src/objtools/eutils/einfo/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/eutils/einfo/einfo.def [new file with mode: 0644] blob
c++/src/objtools/eutils/einfo/einfo.dtd [new file with mode: 0644] blob
c++/src/objtools/eutils/elink/CMakeLists.elink.asn.txt [new file with mode: 0644] blob
c++/src/objtools/eutils/elink/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/eutils/elink/Makefile.elink.lib [new file with mode: 0644] blob
c++/src/objtools/eutils/elink/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/eutils/elink/elink.def [new file with mode: 0644] blob
c++/src/objtools/eutils/elink/elink.dtd [new file with mode: 0644] blob
c++/src/objtools/eutils/epost/CMakeLists.epost.asn.txt [new file with mode: 0644] blob
c++/src/objtools/eutils/epost/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/eutils/epost/Makefile.epost.lib [new file with mode: 0644] blob
c++/src/objtools/eutils/epost/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/eutils/epost/epost.def [new file with mode: 0644] blob
c++/src/objtools/eutils/epost/epost.dtd [new file with mode: 0644] blob
c++/src/objtools/eutils/esearch/CMakeLists.esearch.asn.txt [new file with mode: 0644] blob
c++/src/objtools/eutils/esearch/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/eutils/esearch/Makefile.esearch.lib [new file with mode: 0644] blob
c++/src/objtools/eutils/esearch/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/eutils/esearch/esearch.def [new file with mode: 0644] blob
c++/src/objtools/eutils/esearch/esearch.dtd [new file with mode: 0644] blob
c++/src/objtools/eutils/espell/CMakeLists.espell.asn.txt [new file with mode: 0644] blob
c++/src/objtools/eutils/espell/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/eutils/espell/Makefile.espell.lib [new file with mode: 0644] blob
c++/src/objtools/eutils/espell/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/eutils/espell/espell.def [new file with mode: 0644] blob
c++/src/objtools/eutils/espell/espell.dtd [new file with mode: 0644] blob
c++/src/objtools/eutils/esummary/CMakeLists.esummary.asn.txt [new file with mode: 0644] blob
c++/src/objtools/eutils/esummary/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/eutils/esummary/DocSum.cpp [new file with mode: 0644] blob
c++/src/objtools/eutils/esummary/Item.cpp [new file with mode: 0644] blob
c++/src/objtools/eutils/esummary/Makefile.esummary.lib [new file with mode: 0644] blob
c++/src/objtools/eutils/esummary/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/eutils/esummary/esummary.def [new file with mode: 0644] blob
c++/src/objtools/eutils/esummary/esummary.dtd [new file with mode: 0644] blob
c++/src/objtools/eutils/uilist/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/eutils/uilist/CMakeLists.uilist.asn.txt [new file with mode: 0644] blob
c++/src/objtools/eutils/uilist/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/eutils/uilist/Makefile.uilist.lib [new file with mode: 0644] blob
c++/src/objtools/eutils/uilist/uilist.def [new file with mode: 0644] blob
c++/src/objtools/eutils/uilist/uilist.dtd [new file with mode: 0644] blob
c++/src/objtools/format/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/format/CMakeLists.xformat.lib.txt [new file with mode: 0644] blob
c++/src/objtools/format/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/format/Makefile.xformat.lib [new file with mode: 0644] blob
c++/src/objtools/format/accession_item.cpp [new file with mode: 0644] blob
c++/src/objtools/format/alignment_item.cpp [new file with mode: 0644] blob
c++/src/objtools/format/basecount_item.cpp [new file with mode: 0644] blob
c++/src/objtools/format/cigar_formatter.cpp [new file with mode: 0644] blob
c++/src/objtools/format/comment_item.cpp [new file with mode: 0644] blob
c++/src/objtools/format/context.cpp [new file with mode: 0644] blob
c++/src/objtools/format/contig_item.cpp [new file with mode: 0644] blob
c++/src/objtools/format/ctrl_items.cpp [new file with mode: 0644] blob
c++/src/objtools/format/date_item.cpp [new file with mode: 0644] blob
c++/src/objtools/format/dbsource_item.cpp [new file with mode: 0644] blob
c++/src/objtools/format/defline_item.cpp [new file with mode: 0644] blob
c++/src/objtools/format/embl_formatter.cpp [new file with mode: 0644] blob
c++/src/objtools/format/embl_gather.cpp [new file with mode: 0644] blob
c++/src/objtools/format/feature_item.cpp [new file with mode: 0644] blob
c++/src/objtools/format/flat_file_config.cpp [new file with mode: 0644] blob
c++/src/objtools/format/flat_file_generator.cpp [new file with mode: 0644] blob
c++/src/objtools/format/flat_qual_slots.cpp [new file with mode: 0644] blob
c++/src/objtools/format/flat_seqloc.cpp [new file with mode: 0644] blob
c++/src/objtools/format/format_item_ostream.cpp [new file with mode: 0644] blob
c++/src/objtools/format/ftable_formatter.cpp [new file with mode: 0644] blob
c++/src/objtools/format/ftable_gather.cpp [new file with mode: 0644] blob
c++/src/objtools/format/gap_item.cpp [new file with mode: 0644] blob
c++/src/objtools/format/gather_items.cpp [new file with mode: 0644] blob
c++/src/objtools/format/gather_iter.cpp [new file with mode: 0644] blob
c++/src/objtools/format/gbseq_formatter.cpp [new file with mode: 0644] blob
c++/src/objtools/format/genbank_formatter.cpp [new file with mode: 0644] blob
c++/src/objtools/format/genbank_gather.cpp [new file with mode: 0644] blob
c++/src/objtools/format/gene_finder.cpp [new file with mode: 0644] blob
c++/src/objtools/format/genome_item.cpp [new file with mode: 0644] blob
c++/src/objtools/format/genome_project_item.cpp [new file with mode: 0644] blob
c++/src/objtools/format/html_anchor_item.cpp [new file with mode: 0644] blob
c++/src/objtools/format/inst_info_map.cpp [new file with mode: 0644] blob
c++/src/objtools/format/inst_info_map.hpp [new file with mode: 0644] blob
c++/src/objtools/format/item_formatter.cpp [new file with mode: 0644] blob
c++/src/objtools/format/item_ostream.cpp [new file with mode: 0644] blob
c++/src/objtools/format/keywords_item.cpp [new file with mode: 0644] blob
c++/src/objtools/format/locus_item.cpp [new file with mode: 0644] blob
c++/src/objtools/format/origin_item.cpp [new file with mode: 0644] blob
c++/src/objtools/format/ostream_text_ostream.cpp [new file with mode: 0644] blob
c++/src/objtools/format/primary_item.cpp [new file with mode: 0644] blob
c++/src/objtools/format/qualifiers.cpp [new file with mode: 0644] blob
c++/src/objtools/format/reference_item.cpp [new file with mode: 0644] blob
c++/src/objtools/format/sam_formatter.cpp [new file with mode: 0644] blob
c++/src/objtools/format/segment_item.cpp [new file with mode: 0644] blob
c++/src/objtools/format/sequence_item.cpp [new file with mode: 0644] blob
c++/src/objtools/format/source_item.cpp [new file with mode: 0644] blob
c++/src/objtools/format/tsa_item.cpp [new file with mode: 0644] blob
c++/src/objtools/format/version_item.cpp [new file with mode: 0644] blob
c++/src/objtools/format/wgs_item.cpp [new file with mode: 0644] blob
c++/src/objtools/logging/CMakeLists.logging.lib.txt [new file with mode: 0644] blob
c++/src/objtools/logging/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/logging/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/logging/Makefile.logging.lib [new file with mode: 0644] blob
c++/src/objtools/logging/listener.cpp [new file with mode: 0644] blob
c++/src/objtools/logging/message.cpp [new file with mode: 0644] blob
c++/src/objtools/pubseq_gateway/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/pubseq_gateway/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/pubseq_gateway/client/CMakeLists.psg_client.lib.txt [new file with mode: 0644] blob
c++/src/objtools/pubseq_gateway/client/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/pubseq_gateway/client/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/pubseq_gateway/client/Makefile.psg_client.lib [new file with mode: 0644] blob
c++/src/objtools/pubseq_gateway/client/Makefile.psg_client_macros.mk [new file with mode: 0644] blob
c++/src/objtools/pubseq_gateway/client/mpmc_nw.hpp [new file with mode: 0644] blob
c++/src/objtools/pubseq_gateway/client/psg_client.cpp [new file with mode: 0644] blob
c++/src/objtools/pubseq_gateway/client/psg_client.dot [new file with mode: 0644] blob
c++/src/objtools/pubseq_gateway/client/psg_client_impl.hpp [new file with mode: 0644] blob
c++/src/objtools/pubseq_gateway/client/psg_client_transport.cpp [new file with mode: 0644] blob
c++/src/objtools/pubseq_gateway/client/psg_client_transport.hpp [new file with mode: 0644] blob
c++/src/objtools/pubseq_gateway/client/test/CMakeLists.test_psg_client_impl.app.txt [new file with mode: 0644] blob
c++/src/objtools/pubseq_gateway/client/test/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/pubseq_gateway/client/test/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/pubseq_gateway/client/test/Makefile.test_psg_client_impl.app [new file with mode: 0644] blob
c++/src/objtools/pubseq_gateway/client/test/test_psg_client_impl.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/readers/CMakeLists.xobjread.lib.txt [new file with mode: 0644] blob
c++/src/objtools/readers/CMakeLists.xobjreadex.lib.txt [new file with mode: 0644] blob
c++/src/objtools/readers/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/readers/Makefile.xobjread.lib [new file with mode: 0644] blob
c++/src/objtools/readers/Makefile.xobjreadex.lib [new file with mode: 0644] blob
c++/src/objtools/readers/acc_pattern.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/agp_converter.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/agp_read.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/agp_seq_entry.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/agp_util.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/agp_validate_reader.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/aln_error_reporter.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/aln_errors.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/aln_errors.hpp [new file with mode: 0644] blob
c++/src/objtools/readers/aln_formatguess.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/aln_formatguess.hpp [new file with mode: 0644] blob
c++/src/objtools/readers/aln_formats.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/aln_peek_ahead.hpp [new file with mode: 0644] blob
c++/src/objtools/readers/aln_reader.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/aln_scanner.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/aln_scanner.hpp [new file with mode: 0644] blob
c++/src/objtools/readers/aln_scanner_clustal.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/aln_scanner_clustal.hpp [new file with mode: 0644] blob
c++/src/objtools/readers/aln_scanner_fastagap.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/aln_scanner_fastagap.hpp [new file with mode: 0644] blob
c++/src/objtools/readers/aln_scanner_multalign.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/aln_scanner_multalign.hpp [new file with mode: 0644] blob
c++/src/objtools/readers/aln_scanner_nexus.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/aln_scanner_nexus.hpp [new file with mode: 0644] blob
c++/src/objtools/readers/aln_scanner_phylip.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/aln_scanner_phylip.hpp [new file with mode: 0644] blob
c++/src/objtools/readers/aln_scanner_sequin.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/aln_scanner_sequin.hpp [new file with mode: 0644] blob
c++/src/objtools/readers/aln_util.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/aln_util.hpp [new file with mode: 0644] blob
c++/src/objtools/readers/alnread.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/bed_autosql.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/bed_autosql.hpp [new file with mode: 0644] blob
c++/src/objtools/readers/bed_autosql_custom.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/bed_autosql_custom.hpp [new file with mode: 0644] blob
c++/src/objtools/readers/bed_autosql_standard.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/bed_autosql_standard.hpp [new file with mode: 0644] blob
c++/src/objtools/readers/bed_column_data.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/bed_column_data.hpp [new file with mode: 0644] blob
c++/src/objtools/readers/bed_reader.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/best_feat_finder.cpp [new file with mode: 0755] blob
c++/src/objtools/readers/best_feat_finder.hpp [new file with mode: 0755] blob
c++/src/objtools/readers/cigar.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/descr_mod_apply.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/descr_mod_apply.hpp [new file with mode: 0644] blob
c++/src/objtools/readers/fasta.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/fasta_aln_builder.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/fasta_aln_builder.hpp [new file with mode: 0644] blob
c++/src/objtools/readers/fasta_exception.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/fasta_reader_utils.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/feature_mod_apply.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/feature_mod_apply.hpp [new file with mode: 0644] blob
c++/src/objtools/readers/format_guess_ex.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/getfeature.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/gff2_data.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/gff2_reader.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/gff3_location_merger.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/gff3_location_merger.hpp [new file with mode: 0644] blob
c++/src/objtools/readers/gff3_reader.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/gff3_sofa.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/gff_base_columns.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/gff_reader.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/glimmer_reader.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/gtf_location_merger.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/gtf_location_merger.hpp [new file with mode: 0644] blob
c++/src/objtools/readers/gtf_reader.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/gvf_reader.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/idmapper.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/idmapper_builtin.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/idmapper_builtin_config.ini [new file with mode: 0644] blob
c++/src/objtools/readers/idmapper_builtin_config.inl [new file with mode: 0644] blob
c++/src/objtools/readers/idmapper_config.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/idmapper_database.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/idmapper_gcassembly.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/idmapper_scope.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/line_error.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/message_listener.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/microarray_reader.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/mod_error.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/mod_reader.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/mod_to_enum.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/mod_to_enum.hpp [new file with mode: 0644] blob
c++/src/objtools/readers/phrap.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/psl_data.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/psl_data.hpp [new file with mode: 0644] blob
c++/src/objtools/readers/psl_reader.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/read_util.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/reader_base.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/reader_data.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/reader_data.hpp [new file with mode: 0644] blob
c++/src/objtools/readers/reader_listener.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/reader_message.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/reader_message_handler.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/reader_message_handler.hpp [new file with mode: 0644] blob
c++/src/objtools/readers/readfeat.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/rm_reader.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/seqid_validate.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/source_mod_parser.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/source_mod_parser.hpp [new file with mode: 0644] blob
c++/src/objtools/readers/source_mod_parser_wrapper.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/source_mod_parser_wrapper.hpp [new file with mode: 0644] blob
c++/src/objtools/readers/struct_cmt_reader.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/track_data.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/ucscregion_reader.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/update_builtin_config.sh [new file with mode: 0755] blob
c++/src/objtools/readers/vcf_reader.cpp [new file with mode: 0644] blob
c++/src/objtools/readers/wiggle_reader.cpp [new file with mode: 0644] blob
c++/src/objtools/seqmasks_io/CMakeLists.seqmasks_io.lib.txt [new file with mode: 0644] blob
c++/src/objtools/seqmasks_io/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/seqmasks_io/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/seqmasks_io/Makefile.seqmasks_io.lib [new file with mode: 0644] blob
c++/src/objtools/seqmasks_io/mask_bdb_reader.cpp [new file with mode: 0644] blob
c++/src/objtools/seqmasks_io/mask_cmdline_args.cpp [new file with mode: 0644] blob
c++/src/objtools/seqmasks_io/mask_fasta_reader.cpp [new file with mode: 0644] blob
c++/src/objtools/seqmasks_io/mask_writer.cpp [new file with mode: 0644] blob
c++/src/objtools/seqmasks_io/mask_writer_blastdb_maskinfo.cpp [new file with mode: 0644] blob
c++/src/objtools/seqmasks_io/mask_writer_fasta.cpp [new file with mode: 0644] blob
c++/src/objtools/seqmasks_io/mask_writer_int.cpp [new file with mode: 0644] blob
c++/src/objtools/seqmasks_io/mask_writer_seqloc.cpp [new file with mode: 0644] blob
c++/src/objtools/seqmasks_io/mask_writer_tab.cpp [new file with mode: 0644] blob
c++/src/objtools/simple/CMakeLists.txt [new file with mode: 0644] blob
c++/src/objtools/simple/CMakeLists.xobjsimple.lib.txt [new file with mode: 0644] blob
c++/src/objtools/simple/Makefile.in [new file with mode: 0644] blob
c++/src/objtools/simple/Makefile.xobjsimple.lib [new file with mode: 0644] blob
c++/src/objtools/simple/simple_om.cpp [new file with mode: 0644] blob
c++/src/serial/BinaryFormat [new file with mode: 0644] blob
c++/src/serial/CMakeLists.cserial.lib.txt [new file with mode: 0644] blob
c++/src/serial/CMakeLists.serial.lib.txt [new file with mode: 0644] blob
c++/src/serial/CMakeLists.txt [new file with mode: 0644] blob
c++/src/serial/Makefile.cserial.lib [new file with mode: 0644] blob
c++/src/serial/Makefile.in [new file with mode: 0644] blob
c++/src/serial/Makefile.serial.lib [new file with mode: 0644] blob
c++/src/serial/aliasinfo.cpp [new file with mode: 0644] blob
c++/src/serial/asntypes.cpp [new file with mode: 0644] blob
c++/src/serial/autoptrinfo.cpp [new file with mode: 0644] blob
c++/src/serial/choice.cpp [new file with mode: 0644] blob
c++/src/serial/choiceptr.cpp [new file with mode: 0644] blob
c++/src/serial/classinfo.cpp [new file with mode: 0644] blob
c++/src/serial/classinfob.cpp [new file with mode: 0644] blob
c++/src/serial/continfo.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/CMakeLists.datatool.app.txt [new file with mode: 0644] blob
c++/src/serial/datatool/CMakeLists.txt [new file with mode: 0644] blob
c++/src/serial/datatool/Makefile.datatool.app [new file with mode: 0644] blob
c++/src/serial/datatool/Makefile.in [new file with mode: 0644] blob
c++/src/serial/datatool/alexer.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/alexer.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/aliasstr.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/aliasstr.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/aparser.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/aparser.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/atoken.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/blocktype.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/blocktype.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/choiceptrstr.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/choiceptrstr.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/choicestr.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/choicestr.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/choicetype.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/choicetype.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/classctx.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/classstr.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/classstr.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/code.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/code.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/comments.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/comments.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/datatool.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/datatool.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/datatool.sh [new file with mode: 0755] blob
c++/src/serial/datatool/datatool_xml.sh [new file with mode: 0755] blob
c++/src/serial/datatool/dtdaux.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/dtdaux.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/dtdlexer.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/dtdlexer.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/dtdparser.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/dtdparser.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/enumstr.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/enumstr.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/enumtype.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/enumtype.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/exceptions.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/exceptions.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/filecode.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/filecode.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/fileutil.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/fileutil.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/generate.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/generate.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/jsdlexer.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/jsdlexer.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/jsdparser.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/jsdparser.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/lexer.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/lexer.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/mcontainer.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/mcontainer.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/module.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/module.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/moduleset.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/moduleset.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/namespace.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/namespace.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/parser.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/parser.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/ptrstr.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/ptrstr.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/reftype.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/reftype.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/rpcgen.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/rpcgen.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/srcutil.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/srcutil.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/statictype.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/statictype.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/stdstr.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/stdstr.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/stlstr.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/stlstr.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/testdata/all.asn [new file with mode: 0644] blob
c++/src/serial/datatool/testdata/alltest.xsd [new file with mode: 0644] blob
c++/src/serial/datatool/testdata/data/alltest.xml [new file with mode: 0644] blob
c++/src/serial/datatool/testdata/data/elink.xml [new file with mode: 0644] blob
c++/src/serial/datatool/testdata/data/idx.xml [new file with mode: 0644] blob
c++/src/serial/datatool/testdata/data/note.xml [new file with mode: 0644] blob
c++/src/serial/datatool/testdata/data/set.bin [new file with mode: 0644] blob
c++/src/serial/datatool/testdata/data/set.ent [new file with mode: 0644] blob
c++/src/serial/datatool/testdata/data/set.xml [new file with mode: 0644] blob
c++/src/serial/datatool/testdata/elink.dtd [new file with mode: 0644] blob
c++/src/serial/datatool/testdata/idx.dtd [new file with mode: 0644] blob
c++/src/serial/datatool/testdata/note.dtd [new file with mode: 0644] blob
c++/src/serial/datatool/testdata/res/alltest.xml [new file with mode: 0644] blob
c++/src/serial/datatool/testdata/res/elink.xml [new file with mode: 0644] blob
c++/src/serial/datatool/testdata/res/idx.xml [new file with mode: 0644] blob
c++/src/serial/datatool/testdata/res/note.xml [new file with mode: 0644] blob
c++/src/serial/datatool/testdata/res/set.bin [new file with mode: 0644] blob
c++/src/serial/datatool/testdata/res/set.ent [new file with mode: 0644] blob
c++/src/serial/datatool/testdata/res/set.ent.2 [new file with mode: 0644] blob
c++/src/serial/datatool/testdata/res/set.ent.3 [new file with mode: 0644] blob
c++/src/serial/datatool/testdata/res/set.xml [new file with mode: 0644] blob
c++/src/serial/datatool/testdata/res/set.xml.2 [new file with mode: 0644] blob
c++/src/serial/datatool/tokens.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/traversal_code_generator.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/traversal_code_generator.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/traversal_merger.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/traversal_merger.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/traversal_node.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/traversal_node.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/traversal_pattern_match_callback.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/traversal_pattern_match_callback.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/traversal_spec_file_parser.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/traversal_spec_file_parser.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/type.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/type.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/typestr.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/typestr.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/unitype.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/unitype.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/value.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/value.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/wsdllexer.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/wsdllexer.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/wsdlparser.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/wsdlparser.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/wsdlstr.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/xsdlexer.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/xsdlexer.hpp [new file with mode: 0644] blob
c++/src/serial/datatool/xsdparser.cpp [new file with mode: 0644] blob
c++/src/serial/datatool/xsdparser.hpp [new file with mode: 0644] blob
c++/src/serial/delaybuf.cpp [new file with mode: 0644] blob
c++/src/serial/enumerated.cpp [new file with mode: 0644] blob
c++/src/serial/exception.cpp [new file with mode: 0644] blob
c++/src/serial/grpc_integration/CMakeLists.grpc_integration.lib.txt [new file with mode: 0644] blob
c++/src/serial/grpc_integration/CMakeLists.txt [new file with mode: 0644] blob
c++/src/serial/grpc_integration/Makefile.grpc_integration.lib [new file with mode: 0644] blob
c++/src/serial/grpc_integration/Makefile.in [new file with mode: 0644] blob
c++/src/serial/grpc_integration/grpc_integration.cpp [new file with mode: 0644] blob
c++/src/serial/hookdata.cpp [new file with mode: 0644] blob
c++/src/serial/hookdatakey.cpp [new file with mode: 0644] blob
c++/src/serial/item.cpp [new file with mode: 0644] blob
c++/src/serial/iterator.cpp [new file with mode: 0644] blob
c++/src/serial/member.cpp [new file with mode: 0644] blob
c++/src/serial/memberid.cpp [new file with mode: 0644] blob
c++/src/serial/memberlist.cpp [new file with mode: 0644] blob
c++/src/serial/objcopy.cpp [new file with mode: 0644] blob
c++/src/serial/object.cpp [new file with mode: 0644] blob
c++/src/serial/objectinfo.cpp [new file with mode: 0644] blob
c++/src/serial/objectio.cpp [new file with mode: 0644] blob
c++/src/serial/objectiter.cpp [new file with mode: 0644] blob
c++/src/serial/objhook.cpp [new file with mode: 0644] blob
c++/src/serial/objistr.cpp [new file with mode: 0644] blob
c++/src/serial/objistrasn.cpp [new file with mode: 0644] blob
c++/src/serial/objistrasnb.cpp [new file with mode: 0644] blob
c++/src/serial/objistrjson.cpp [new file with mode: 0644] blob
c++/src/serial/objistrxml.cpp [new file with mode: 0644] blob
c++/src/serial/objlist.cpp [new file with mode: 0644] blob
c++/src/serial/objostr.cpp [new file with mode: 0644] blob
c++/src/serial/objostrasn.cpp [new file with mode: 0644] blob
c++/src/serial/objostrasnb.cpp [new file with mode: 0644] blob
c++/src/serial/objostrjson.cpp [new file with mode: 0644] blob
c++/src/serial/objostrxml.cpp [new file with mode: 0644] blob
c++/src/serial/objstack.cpp [new file with mode: 0644] blob
c++/src/serial/objstrb.cpp [new file with mode: 0644] blob
c++/src/serial/pack_string.cpp [new file with mode: 0644] blob
c++/src/serial/pathhook.cpp [new file with mode: 0644] blob
c++/src/serial/ptrinfo.cpp [new file with mode: 0644] blob
c++/src/serial/rpcbase.cpp [new file with mode: 0644] blob
c++/src/serial/rtti.cpp [new file with mode: 0644] blob
c++/src/serial/serial.cpp [new file with mode: 0644] blob
c++/src/serial/serialasn.cpp [new file with mode: 0644] blob
c++/src/serial/serializable.cpp [new file with mode: 0644] blob
c++/src/serial/serialobject.cpp [new file with mode: 0644] blob
c++/src/serial/stdtypes.cpp [new file with mode: 0644] blob
c++/src/serial/stltypes.cpp [new file with mode: 0644] blob
c++/src/serial/typeinfo.cpp [new file with mode: 0644] blob
c++/src/serial/typemap.cpp [new file with mode: 0644] blob
c++/src/serial/typeref.cpp [new file with mode: 0644] blob
c++/src/serial/variant.cpp [new file with mode: 0644] blob
c++/src/util/CMakeLists.txt [new file with mode: 0644] blob
c++/src/util/CMakeLists.util.lib.txt [new file with mode: 0644] blob
c++/src/util/Makefile.in [new file with mode: 0644] blob
c++/src/util/Makefile.util.lib [new file with mode: 0644] blob
c++/src/util/Makefile.util.lib.msvc [new file with mode: 0644] blob
c++/src/util/ascii85.cpp [new file with mode: 0644] blob
c++/src/util/bitset/CMakeLists.txt [new file with mode: 0644] blob
c++/src/util/bitset/Makefile.in [new file with mode: 0644] blob
c++/src/util/bytesrc.cpp [new file with mode: 0644] blob
c++/src/util/cache_async.cpp [new file with mode: 0644] blob
c++/src/util/checksum.cpp [new file with mode: 0644] blob
c++/src/util/checksum/cityhash/COPYING [new file with mode: 0644] blob
c++/src/util/checksum/cityhash/README [new file with mode: 0644] blob
c++/src/util/checksum/cityhash/city.cc [new file with mode: 0644] blob
c++/src/util/checksum/cityhash/city.h [new file with mode: 0644] blob
c++/src/util/checksum/cityhash/citycrc.h [new file with mode: 0644] blob
c++/src/util/checksum/cityhash/config.h [new file with mode: 0644] blob
c++/src/util/checksum/farmhash/COPYING [new file with mode: 0644] blob
c++/src/util/checksum/farmhash/README [new file with mode: 0644] blob
c++/src/util/checksum/farmhash/config.h [new file with mode: 0644] blob
c++/src/util/checksum/farmhash/farmhash.cc [new file with mode: 0644] blob
c++/src/util/checksum/farmhash/farmhash.h [new file with mode: 0644] blob
c++/src/util/checksum/murmurhash/MurmurHash2.cxx [new file with mode: 0644] blob
c++/src/util/checksum/murmurhash/MurmurHash2.h [new file with mode: 0644] blob
c++/src/util/checksum/murmurhash/MurmurHash3.cxx [new file with mode: 0644] blob
c++/src/util/checksum/murmurhash/MurmurHash3.h [new file with mode: 0644] blob
c++/src/util/checksum_cityhash.cpp [new file with mode: 0644] blob
c++/src/util/checksum_farmhash.cpp [new file with mode: 0644] blob
c++/src/util/compress/CMakeLists.txt [new file with mode: 0644] blob
c++/src/util/compress/Makefile.in [new file with mode: 0644] blob
c++/src/util/compress/api/CMakeLists.compress.lib.txt [new file with mode: 0644] blob
c++/src/util/compress/api/CMakeLists.txt [new file with mode: 0644] blob
c++/src/util/compress/api/Makefile.compress.lib [new file with mode: 0644] blob
c++/src/util/compress/api/Makefile.compress.lib.msvc [new file with mode: 0644] blob
c++/src/util/compress/api/Makefile.in [new file with mode: 0644] blob
c++/src/util/compress/api/archive.cpp [new file with mode: 0644] blob
c++/src/util/compress/api/archive_.cpp [new file with mode: 0644] blob
c++/src/util/compress/api/archive_zip.cpp [new file with mode: 0644] blob
c++/src/util/compress/api/archive_zip.hpp [new file with mode: 0644] blob
c++/src/util/compress/api/bzip2.cpp [new file with mode: 0644] blob
c++/src/util/compress/api/compress.cpp [new file with mode: 0644] blob
c++/src/util/compress/api/lzo.cpp [new file with mode: 0644] blob
c++/src/util/compress/api/miniz/LICENSE [new file with mode: 0644] blob
c++/src/util/compress/api/miniz/miniz.c [new file with mode: 0644] blob
c++/src/util/compress/api/miniz/miniz.h [new file with mode: 0644] blob
c++/src/util/compress/api/miniz/miniz_common.h [new file with mode: 0644] blob
c++/src/util/compress/api/miniz/miniz_export.h [new file with mode: 0644] blob
c++/src/util/compress/api/miniz/miniz_tdef.c [new file with mode: 0644] blob
c++/src/util/compress/api/miniz/miniz_tdef.h [new file with mode: 0644] blob
c++/src/util/compress/api/miniz/miniz_tinfl.c [new file with mode: 0644] blob
c++/src/util/compress/api/miniz/miniz_tinfl.h [new file with mode: 0644] blob
c++/src/util/compress/api/miniz/miniz_zip.c [new file with mode: 0644] blob
c++/src/util/compress/api/miniz/miniz_zip.h [new file with mode: 0644] blob
c++/src/util/compress/api/miniz/tinfl.c [new file with mode: 0644] blob
c++/src/util/compress/api/reader_zlib.cpp [new file with mode: 0644] blob
c++/src/util/compress/api/stream.cpp [new file with mode: 0644] blob
c++/src/util/compress/api/stream_util.cpp [new file with mode: 0644] blob
c++/src/util/compress/api/streambuf.cpp [new file with mode: 0644] blob
c++/src/util/compress/api/streambuf.hpp [new file with mode: 0644] blob
c++/src/util/compress/api/tar.cpp [new file with mode: 0644] blob
c++/src/util/compress/api/zlib.cpp [new file with mode: 0644] blob
c++/src/util/compress/bzip2/CHANGES [new file with mode: 0644] blob
c++/src/util/compress/bzip2/CMakeLists.bzip2.lib.txt [new file with mode: 0644] blob
c++/src/util/compress/bzip2/CMakeLists.txt [new file with mode: 0644] blob
c++/src/util/compress/bzip2/LICENSE [new file with mode: 0644] blob
c++/src/util/compress/bzip2/Makefile.bzip2.lib [new file with mode: 0644] blob
c++/src/util/compress/bzip2/Makefile.in [new file with mode: 0644] blob
c++/src/util/compress/bzip2/README [new file with mode: 0644] blob
c++/src/util/compress/bzip2/README.COMPILATION.PROBLEMS [new file with mode: 0644] blob
c++/src/util/compress/bzip2/README.XML.STUFF [new file with mode: 0644] blob
c++/src/util/compress/bzip2/blocksort.c [new file with mode: 0644] blob
c++/src/util/compress/bzip2/bzdiff [new file with mode: 0644] blob
c++/src/util/compress/bzip2/bzdiff.1 [new file with mode: 0644] blob
c++/src/util/compress/bzip2/bzgrep [new file with mode: 0644] blob
c++/src/util/compress/bzip2/bzgrep.1 [new file with mode: 0644] blob
c++/src/util/compress/bzip2/bzip.css [new file with mode: 0644] blob
c++/src/util/compress/bzip2/bzip2.1 [new file with mode: 0644] blob
c++/src/util/compress/bzip2/bzip2.c [new file with mode: 0644] blob
c++/src/util/compress/bzip2/bzip2.txt [new file with mode: 0644] blob
c++/src/util/compress/bzip2/bzip2recover.c [new file with mode: 0644] blob
c++/src/util/compress/bzip2/bzlib.c [new file with mode: 0644] blob
c++/src/util/compress/bzip2/bzlib_private.h [new file with mode: 0644] blob
c++/src/util/compress/bzip2/bzmore [new file with mode: 0644] blob
c++/src/util/compress/bzip2/bzmore.1 [new file with mode: 0644] blob
c++/src/util/compress/bzip2/compress.c [new file with mode: 0644] blob
c++/src/util/compress/bzip2/crctable.c [new file with mode: 0644] blob
c++/src/util/compress/bzip2/decompress.c [new file with mode: 0644] blob
c++/src/util/compress/bzip2/dlltest.c [new file with mode: 0644] blob
c++/src/util/compress/bzip2/huffman.c [new file with mode: 0644] blob
c++/src/util/compress/bzip2/manual.html [new file with mode: 0644] blob
c++/src/util/compress/bzip2/manual.pdf [new file with mode: 0644] blob
c++/src/util/compress/bzip2/manual.xml [new file with mode: 0644] blob
c++/src/util/compress/bzip2/mk251.c [new file with mode: 0644] blob
c++/src/util/compress/bzip2/ncbi_bz2_compress.c [new file with mode: 0644] blob
c++/src/util/compress/bzip2/randtable.c [new file with mode: 0644] blob
c++/src/util/compress/bzip2/spewG.c [new file with mode: 0644] blob
c++/src/util/compress/bzip2/unzcrash.c [new file with mode: 0644] blob
c++/src/util/compress/zlib/CMakeLists.txt [new file with mode: 0644] blob
c++/src/util/compress/zlib/CMakeLists.zlib.lib.txt [new file with mode: 0644] blob
c++/src/util/compress/zlib/ChangeLog [new file with mode: 0644] blob
c++/src/util/compress/zlib/FAQ [new file with mode: 0644] blob
c++/src/util/compress/zlib/INDEX [new file with mode: 0644] blob
c++/src/util/compress/zlib/Makefile.in [new file with mode: 0644] blob
c++/src/util/compress/zlib/Makefile.zlib.lib [new file with mode: 0644] blob
c++/src/util/compress/zlib/README [new file with mode: 0644] blob
c++/src/util/compress/zlib/adler32.c [new file with mode: 0644] blob
c++/src/util/compress/zlib/compress.c [new file with mode: 0644] blob
c++/src/util/compress/zlib/crc32.c [new file with mode: 0644] blob
c++/src/util/compress/zlib/crc32.h [new file with mode: 0644] blob
c++/src/util/compress/zlib/deflate.c [new file with mode: 0644] blob
c++/src/util/compress/zlib/deflate.h [new file with mode: 0644] blob
c++/src/util/compress/zlib/gzclose.c [new file with mode: 0644] blob
c++/src/util/compress/zlib/gzguts.h [new file with mode: 0644] blob
c++/src/util/compress/zlib/gzlib.c [new file with mode: 0644] blob
c++/src/util/compress/zlib/gzread.c [new file with mode: 0644] blob
c++/src/util/compress/zlib/gzwrite.c [new file with mode: 0644] blob
c++/src/util/compress/zlib/infback.c [new file with mode: 0644] blob
c++/src/util/compress/zlib/inffast.c [new file with mode: 0644] blob
c++/src/util/compress/zlib/inffast.h [new file with mode: 0644] blob
c++/src/util/compress/zlib/inffixed.h [new file with mode: 0644] blob
c++/src/util/compress/zlib/inflate.c [new file with mode: 0644] blob
c++/src/util/compress/zlib/inflate.h [new file with mode: 0644] blob
c++/src/util/compress/zlib/inftrees.c [new file with mode: 0644] blob
c++/src/util/compress/zlib/inftrees.h [new file with mode: 0644] blob
c++/src/util/compress/zlib/ncbi_z_compress.c [new file with mode: 0644] blob
c++/src/util/compress/zlib/trees.c [new file with mode: 0644] blob
c++/src/util/compress/zlib/trees.h [new file with mode: 0644] blob
c++/src/util/compress/zlib/uncompr.c [new file with mode: 0644] blob
c++/src/util/compress/zlib/zutil.c [new file with mode: 0644] blob
c++/src/util/crc32_sse.cpp [new file with mode: 0644] blob
c++/src/util/crc32tables.c [new file with mode: 0644] blob
c++/src/util/creaders/CMakeLists.creaders.lib.txt [new file with mode: 0644] blob
c++/src/util/creaders/CMakeLists.txt [new file with mode: 0644] blob
c++/src/util/creaders/Makefile.creaders.lib [new file with mode: 0644] blob
c++/src/util/creaders/Makefile.creaders.lib.unix [new file with mode: 0644] blob
c++/src/util/creaders/Makefile.in [new file with mode: 0644] blob
c++/src/util/creaders/alnread.c [new file with mode: 0644] blob
c++/src/util/ddump_viewer.cpp [new file with mode: 0644] blob
c++/src/util/dictionary.cpp [new file with mode: 0644] blob
c++/src/util/dictionary_util.cpp [new file with mode: 0644] blob
c++/src/util/distribution.cpp [new file with mode: 0644] blob
c++/src/util/file_manifest.cpp [new file with mode: 0644] blob
c++/src/util/file_obsolete.cpp [new file with mode: 0644] blob
c++/src/util/format_guess.cpp [new file with mode: 0644] blob
c++/src/util/histogram_binning.cpp [new file with mode: 0644] blob
c++/src/util/itransaction.cpp [new file with mode: 0644] blob
c++/src/util/itree.cpp [new file with mode: 0644] blob
c++/src/util/line_reader.cpp [new file with mode: 0644] blob
c++/src/util/lmdb/CHANGES [new file with mode: 0644] blob
c++/src/util/lmdb/CMakeLists.lmdb.lib.txt [new file with mode: 0644] blob
c++/src/util/lmdb/CMakeLists.lmdb_test1.app.txt [new file with mode: 0644] blob
c++/src/util/lmdb/CMakeLists.lmdb_test2.app.txt [new file with mode: 0644] blob
c++/src/util/lmdb/CMakeLists.lmdb_test3.app.txt [new file with mode: 0644] blob
c++/src/util/lmdb/CMakeLists.lmdb_test4.app.txt [new file with mode: 0644] blob
c++/src/util/lmdb/CMakeLists.lmdb_test5.app.txt [new file with mode: 0644] blob
c++/src/util/lmdb/CMakeLists.lmdb_test6.app.txt [new file with mode: 0644] blob
c++/src/util/lmdb/CMakeLists.txt [new file with mode: 0644] blob
c++/src/util/lmdb/COPYRIGHT [new file with mode: 0644] blob
c++/src/util/lmdb/Doxyfile [new file with mode: 0644] blob
c++/src/util/lmdb/LICENSE [new file with mode: 0644] blob
c++/src/util/lmdb/Makefile.in [new file with mode: 0644] blob
c++/src/util/lmdb/Makefile.lmdb.lib [new file with mode: 0644] blob
c++/src/util/lmdb/Makefile.lmdb_test1.app [new file with mode: 0644] blob
c++/src/util/lmdb/Makefile.lmdb_test2.app [new file with mode: 0644] blob
c++/src/util/lmdb/Makefile.lmdb_test3.app [new file with mode: 0644] blob
c++/src/util/lmdb/Makefile.lmdb_test4.app [new file with mode: 0644] blob
c++/src/util/lmdb/Makefile.lmdb_test5.app [new file with mode: 0644] blob
c++/src/util/lmdb/Makefile.lmdb_test6.app [new file with mode: 0644] blob
c++/src/util/lmdb/Makefile.orig [new file with mode: 0644] blob
c++/src/util/lmdb/intro.doc [new file with mode: 0644] blob
c++/src/util/lmdb/lmdb.h [new file with mode: 0644] blob
c++/src/util/lmdb/lmdb_test.sh [new file with mode: 0755] blob
c++/src/util/lmdb/mdb.c [new file with mode: 0644] blob
c++/src/util/lmdb/mdb_copy.1 [new file with mode: 0644] blob
c++/src/util/lmdb/mdb_copy.c [new file with mode: 0644] blob
c++/src/util/lmdb/mdb_dump.1 [new file with mode: 0644] blob
c++/src/util/lmdb/mdb_dump.c [new file with mode: 0644] blob
c++/src/util/lmdb/mdb_load.1 [new file with mode: 0644] blob
c++/src/util/lmdb/mdb_load.c [new file with mode: 0644] blob
c++/src/util/lmdb/mdb_stat.1 [new file with mode: 0644] blob
c++/src/util/lmdb/mdb_stat.c [new file with mode: 0644] blob
c++/src/util/lmdb/midl.c [new file with mode: 0644] blob
c++/src/util/lmdb/midl.h [new file with mode: 0644] blob
c++/src/util/lmdb/mtest.c [new file with mode: 0644] blob
c++/src/util/lmdb/mtest2.c [new file with mode: 0644] blob
c++/src/util/lmdb/mtest3.c [new file with mode: 0644] blob
c++/src/util/lmdb/mtest4.c [new file with mode: 0644] blob
c++/src/util/lmdb/mtest5.c [new file with mode: 0644] blob
c++/src/util/lmdb/mtest6.c [new file with mode: 0644] blob
c++/src/util/lmdb/sample-bdb.txt [new file with mode: 0644] blob
c++/src/util/lmdb/sample-mdb.txt [new file with mode: 0644] blob
c++/src/util/lmdb/tooltag [new file with mode: 0644] blob
c++/src/util/lmdbxx/AUTHORS [new file with mode: 0644] blob
c++/src/util/lmdbxx/CMakeLists.lmdbxx_sample.app.txt [new file with mode: 0644] blob
c++/src/util/lmdbxx/CMakeLists.txt [new file with mode: 0644] blob
c++/src/util/lmdbxx/CREDITS [new file with mode: 0644] blob
c++/src/util/lmdbxx/INSTALL [new file with mode: 0644] blob
c++/src/util/lmdbxx/Makefile.in [new file with mode: 0644] blob
c++/src/util/lmdbxx/Makefile.lmdbxx_sample.app [new file with mode: 0644] blob
c++/src/util/lmdbxx/Makefile.orig [new file with mode: 0644] blob
c++/src/util/lmdbxx/README [new file with mode: 0644] blob
c++/src/util/lmdbxx/README.rst [new file with mode: 0644] blob
c++/src/util/lmdbxx/UNLICENSE [new file with mode: 0644] blob
c++/src/util/lmdbxx/VERSION [new file with mode: 0644] blob
c++/src/util/lmdbxx/check.cc [new file with mode: 0644] blob
c++/src/util/lmdbxx/example.cc [new file with mode: 0644] blob
c++/src/util/lmdbxx/example.cpp [new file with mode: 0644] blob
c++/src/util/lmdbxx/lmdb++.h.orig [new file with mode: 0644] blob
c++/src/util/logrotate.cpp [new file with mode: 0644] blob
c++/src/util/md5.cpp [new file with mode: 0644] blob
c++/src/util/miscmath.c [new file with mode: 0644] blob
c++/src/util/multi_writer.cpp [new file with mode: 0644] blob
c++/src/util/multipattern_search.cpp [new file with mode: 0644] blob
c++/src/util/multipattern_search_impl.hpp [new file with mode: 0644] blob
c++/src/util/mutex_pool.cpp [new file with mode: 0644] blob
c++/src/util/ncbi_cache.cpp [new file with mode: 0644] blob
c++/src/util/ncbi_erf.c [new file with mode: 0644] blob
c++/src/util/profile/CMakeLists.txt [new file with mode: 0644] blob
c++/src/util/profile/CMakeLists.utrtprof.lib.txt [new file with mode: 0644] blob
c++/src/util/profile/Makefile.in [new file with mode: 0644] blob
c++/src/util/profile/Makefile.utrtprof.lib [new file with mode: 0644] blob
c++/src/util/profile/rtprofile.cpp [new file with mode: 0644] blob
c++/src/util/random_gen.cpp [new file with mode: 0644] blob
c++/src/util/rangelist.cpp [new file with mode: 0644] blob
c++/src/util/regexp/AUTHORS [new file with mode: 0644] blob
c++/src/util/regexp/CMakeLists.regexp.lib.txt [new file with mode: 0644] blob
c++/src/util/regexp/CMakeLists.test_pcre.app.txt [new file with mode: 0644] blob
c++/src/util/regexp/CMakeLists.txt [new file with mode: 0644] blob
c++/src/util/regexp/ChangeLog [new file with mode: 0644] blob
c++/src/util/regexp/HACKING [new file with mode: 0644] blob
c++/src/util/regexp/LICENCE [new file with mode: 0644] blob
c++/src/util/regexp/Makefile.in [new file with mode: 0644] blob
c++/src/util/regexp/Makefile.regexp.lib [new file with mode: 0644] blob
c++/src/util/regexp/Makefile.test_pcre.app [new file with mode: 0644] blob
c++/src/util/regexp/NEWS [new file with mode: 0644] blob
c++/src/util/regexp/README [new file with mode: 0644] blob
c++/src/util/regexp/README.NCBI [new file with mode: 0644] blob
c++/src/util/regexp/RunTest [new file with mode: 0644] blob
c++/src/util/regexp/RunTest.bat [new file with mode: 0644] blob
c++/src/util/regexp/config.h [new file with mode: 0644] blob
c++/src/util/regexp/pcre_byte_order.c [new file with mode: 0644] blob
c++/src/util/regexp/pcre_chartables.c [new file with mode: 0644] blob
c++/src/util/regexp/pcre_compile.c [new file with mode: 0644] blob
c++/src/util/regexp/pcre_config.c [new file with mode: 0644] blob
c++/src/util/regexp/pcre_dfa_exec.c [new file with mode: 0644] blob
c++/src/util/regexp/pcre_exec.c [new file with mode: 0644] blob
c++/src/util/regexp/pcre_fullinfo.c [new file with mode: 0644] blob
c++/src/util/regexp/pcre_get.c [new file with mode: 0644] blob
c++/src/util/regexp/pcre_globals.c [new file with mode: 0644] blob
c++/src/util/regexp/pcre_internal.h [new file with mode: 0644] blob
c++/src/util/regexp/pcre_jit_compile.c [new file with mode: 0644] blob
c++/src/util/regexp/pcre_jit_test.c [new file with mode: 0644] blob
c++/src/util/regexp/pcre_maketables.c [new file with mode: 0644] blob
c++/src/util/regexp/pcre_newline.c [new file with mode: 0644] blob
c++/src/util/regexp/pcre_ord2utf8.c [new file with mode: 0644] blob
c++/src/util/regexp/pcre_printint.c [new file with mode: 0644] blob
c++/src/util/regexp/pcre_printint.src [new file with mode: 0644] blob
c++/src/util/regexp/pcre_refcount.c [new file with mode: 0644] blob
c++/src/util/regexp/pcre_scanner.cc [new file with mode: 0644] blob
c++/src/util/regexp/pcre_scanner.h [new file with mode: 0644] blob
c++/src/util/regexp/pcre_scanner_unittest.cc [new file with mode: 0644] blob
c++/src/util/regexp/pcre_string_utils.c [new file with mode: 0644] blob
c++/src/util/regexp/pcre_stringpiece.cc [new file with mode: 0644] blob
c++/src/util/regexp/pcre_stringpiece_unittest.cc [new file with mode: 0644] blob
c++/src/util/regexp/pcre_study.c [new file with mode: 0644] blob
c++/src/util/regexp/pcre_tables.c [new file with mode: 0644] blob
c++/src/util/regexp/pcre_ucd.c [new file with mode: 0644] blob
c++/src/util/regexp/pcre_valid_utf8.c [new file with mode: 0644] blob
c++/src/util/regexp/pcre_version.c [new file with mode: 0644] blob
c++/src/util/regexp/pcre_xclass.c [new file with mode: 0644] blob
c++/src/util/regexp/pcrecpp.cc [new file with mode: 0644] blob
c++/src/util/regexp/pcrecpp.h [new file with mode: 0644] blob
c++/src/util/regexp/pcrecpp_internal.h [new file with mode: 0644] blob
c++/src/util/regexp/pcredemo.c [new file with mode: 0644] blob
c++/src/util/regexp/pcregrep.c [new file with mode: 0644] blob
c++/src/util/regexp/pcreposix.c [new file with mode: 0644] blob
c++/src/util/regexp/pcreposix.h [new file with mode: 0644] blob
c++/src/util/regexp/pcretest.c [new file with mode: 0644] blob
c++/src/util/regexp/perltest.pl [new file with mode: 0644] blob
c++/src/util/regexp/testdata/grepbinary [new file with mode: 0644] blob
c++/src/util/regexp/testdata/grepfilelist [new file with mode: 0644] blob
c++/src/util/regexp/testdata/grepinput [new file with mode: 0644] blob
c++/src/util/regexp/testdata/grepinput3 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/grepinput8 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/grepinputv [new file with mode: 0644] blob
c++/src/util/regexp/testdata/grepinputx [new file with mode: 0644] blob
c++/src/util/regexp/testdata/greplist [new file with mode: 0644] blob
c++/src/util/regexp/testdata/grepoutput [new file with mode: 0644] blob
c++/src/util/regexp/testdata/grepoutput8 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/grepoutputN [new file with mode: 0644] blob
c++/src/util/regexp/testdata/greppatN4 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/saved16 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/saved16BE-1 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/saved16BE-2 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/saved16LE-1 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/saved16LE-2 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/saved32 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/saved32BE-1 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/saved32BE-2 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/saved32LE-1 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/saved32LE-2 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/saved8 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testinput1 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testinput10 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testinput11 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testinput12 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testinput13 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testinput14 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testinput15 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testinput16 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testinput17 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testinput18 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testinput19 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testinput2 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testinput20 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testinput21 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testinput22 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testinput23 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testinput24 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testinput25 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testinput26 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testinput3 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testinput4 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testinput5 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testinput6 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testinput7 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testinput8 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testinput9 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testinputEBC [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testoutput1 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testoutput10 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testoutput11-16 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testoutput11-32 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testoutput11-8 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testoutput12 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testoutput13 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testoutput14 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testoutput15 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testoutput16 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testoutput17 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testoutput18-16 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testoutput18-32 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testoutput19 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testoutput2 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testoutput20 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testoutput21-16 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testoutput21-32 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testoutput22-16 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testoutput22-32 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testoutput23 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testoutput24 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testoutput25 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testoutput26 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testoutput3 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testoutput3A [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testoutput3B [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testoutput4 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testoutput5 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testoutput6 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testoutput7 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testoutput8 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testoutput9 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/testoutputEBC [new file with mode: 0644] blob
c++/src/util/regexp/testdata/valgrind-jit.supp [new file with mode: 0644] blob
c++/src/util/regexp/testdata/wintestinput3 [new file with mode: 0644] blob
c++/src/util/regexp/testdata/wintestoutput3 [new file with mode: 0644] blob
c++/src/util/regexp/ucp.h [new file with mode: 0644] blob
c++/src/util/retry_ctx.cpp [new file with mode: 0644] blob
c++/src/util/scheduler.cpp [new file with mode: 0644] blob
c++/src/util/sequtil/CMakeLists.sequtil.lib.txt [new file with mode: 0644] blob
c++/src/util/sequtil/CMakeLists.txt [new file with mode: 0644] blob
c++/src/util/sequtil/Makefile.in [new file with mode: 0644] blob
c++/src/util/sequtil/Makefile.sequtil.lib [new file with mode: 0644] blob
c++/src/util/sequtil/sequtil.cpp [new file with mode: 0644] blob
c++/src/util/sequtil/sequtil_best_codings.inc [new file with mode: 0644] blob
c++/src/util/sequtil/sequtil_convert.cpp [new file with mode: 0644] blob
c++/src/util/sequtil/sequtil_convert_imp.cpp [new file with mode: 0644] blob
c++/src/util/sequtil/sequtil_convert_imp.hpp [new file with mode: 0644] blob
c++/src/util/sequtil/sequtil_manip.cpp [new file with mode: 0644] blob
c++/src/util/sequtil/sequtil_shared.cpp [new file with mode: 0644] blob
c++/src/util/sequtil/sequtil_shared.hpp [new file with mode: 0644] blob
c++/src/util/sequtil/sequtil_tables.cpp [new file with mode: 0644] blob
c++/src/util/sequtil/sequtil_tables.hpp [new file with mode: 0644] blob
c++/src/util/sgml_entity.cpp [new file with mode: 0644] blob
c++/src/util/smalldns.cpp [new file with mode: 0644] blob
c++/src/util/static_set.cpp [new file with mode: 0644] blob
c++/src/util/strbuffer.cpp [new file with mode: 0644] blob
c++/src/util/stream_source.cpp [new file with mode: 0644] blob
c++/src/util/strsearch.cpp [new file with mode: 0644] blob
c++/src/util/table_printer.cpp [new file with mode: 0644] blob
c++/src/util/tables/CMakeLists.tables.lib.txt [new file with mode: 0644] blob
c++/src/util/tables/CMakeLists.txt [new file with mode: 0644] blob
c++/src/util/tables/Makefile.in [new file with mode: 0644] blob
c++/src/util/tables/Makefile.tables.lib [new file with mode: 0644] blob
c++/src/util/tables/convert_scoremat.pl [new file with mode: 0755] blob
c++/src/util/tables/raw_scoremat.c [new file with mode: 0644] blob
c++/src/util/tables/sm_blosum45.c [new file with mode: 0644] blob
c++/src/util/tables/sm_blosum50.c [new file with mode: 0644] blob
c++/src/util/tables/sm_blosum62.c [new file with mode: 0644] blob
c++/src/util/tables/sm_blosum80.c [new file with mode: 0644] blob
c++/src/util/tables/sm_blosum90.c [new file with mode: 0644] blob
c++/src/util/tables/sm_identity.c [new file with mode: 0644] blob
c++/src/util/tables/sm_pam250.c [new file with mode: 0644] blob
c++/src/util/tables/sm_pam30.c [new file with mode: 0644] blob
c++/src/util/tables/sm_pam70.c [new file with mode: 0644] blob
c++/src/util/thread_nonstop.cpp [new file with mode: 0644] blob
c++/src/util/thread_pool.cpp [new file with mode: 0644] blob
c++/src/util/thread_pool_ctrl.cpp [new file with mode: 0644] blob
c++/src/util/thread_pool_old.cpp [new file with mode: 0644] blob
c++/src/util/transmissionrw.cpp [new file with mode: 0644] blob
c++/src/util/unicode.cpp [new file with mode: 0644] blob
c++/src/util/unicode_plans.inl [new file with mode: 0644] blob
c++/src/util/unicode_to_ascii.txt [new file with mode: 0644] blob
c++/src/util/utf8.cpp [new file with mode: 0644] blob
c++/src/util/util_exception.cpp [new file with mode: 0644] blob
c++/src/util/util_misc.cpp [new file with mode: 0644] blob
c++/src/util/uttp.cpp [new file with mode: 0644] blob
c++/src/util/xregexp/CMakeLists.txt [new file with mode: 0644] blob
c++/src/util/xregexp/CMakeLists.xregexp.lib.txt [new file with mode: 0644] blob
c++/src/util/xregexp/CMakeLists.xregexp_template_tester.lib.txt [new file with mode: 0644] blob
c++/src/util/xregexp/Makefile.in [new file with mode: 0644] blob
c++/src/util/xregexp/Makefile.xregexp.lib [new file with mode: 0644] blob
c++/src/util/xregexp/Makefile.xregexp_template_tester.lib [new file with mode: 0644] blob
c++/src/util/xregexp/arg_regexp.cpp [new file with mode: 0644] blob
c++/src/util/xregexp/convert_dates_iso8601.cpp [new file with mode: 0644] blob
c++/src/util/xregexp/mask_regexp.cpp [new file with mode: 0644] blob
c++/src/util/xregexp/regexp.cpp [new file with mode: 0644] blob
c++/src/util/xregexp/regexp_template_tester.cpp [new file with mode: 0644] blob
Unnamed repository; edit this file 'description' to name the repository.