dgit.raspbian.org Git - python-pysam.git/commit

author	Charles Plessy <plessy@debian.org>
	Wed, 8 Jun 2011 10:40:41 +0000 (19:40 +0900)
committer	Charles Plessy <plessy@debian.org>
	Wed, 8 Jun 2011 10:40:41 +0000 (19:40 +0900)
commit	46e6c2f107a54e39877ae65e46b3491fbfb85122
tree	7adc2223d587f645d58ee5ff1ca0ee9eb8b3bb9a	tree \| snapshot
parent	10e2bb45002784b73d4fb0f6c8b52427ec503577	commit \| diff

Imported Upstream version 0.5

83 files changed:

MANIFEST.in		diff \| blob \| history
PKG-INFO		diff \| blob \| history
pysam.egg-info/PKG-INFO		diff \| blob \| history
pysam.egg-info/SOURCES.txt		diff \| blob \| history
pysam.egg-info/not-zip-safe	[new file with mode: 0644]	blob
pysam.egg-info/top_level.txt		diff \| blob \| history
pysam/Pileup.py		diff \| blob \| history
pysam/TabProxies.c	[new file with mode: 0644]	blob
pysam/TabProxies.pxd	[new file with mode: 0644]	blob
pysam/TabProxies.pyx	[new file with mode: 0644]	blob
pysam/VCF.py	[new file with mode: 0644]	blob
pysam/__init__.py		diff \| blob \| history
pysam/csamtools.c		diff \| blob \| history
pysam/csamtools.pxd		diff \| blob \| history
pysam/csamtools.pyx		diff \| blob \| history
pysam/ctabix.c		diff \| blob \| history
pysam/ctabix.pxd		diff \| blob \| history
pysam/ctabix.pyx		diff \| blob \| history
pysam/cvcf.c	[new file with mode: 0644]	blob
pysam/cvcf.pxd	[new file with mode: 0644]	blob
pysam/cvcf.pyx	[new file with mode: 0644]	blob
pysam/pysam_util.c		diff \| blob \| history
pysam/version.py		diff \| blob \| history
samtools/bam.c.pysam.c		diff \| blob \| history
samtools/bam.h		diff \| blob \| history
samtools/bam2bcf.c.pysam.c		diff \| blob \| history
samtools/bam2bcf.h		diff \| blob \| history
samtools/bam2bcf_indel.c.pysam.c		diff \| blob \| history
samtools/bam2depth.c.pysam.c	[new file with mode: 0644]	blob
samtools/bam_aux.c.pysam.c		diff \| blob \| history
samtools/bam_cat.c.pysam.c	[new file with mode: 0644]	blob
samtools/bam_import.c.pysam.c		diff \| blob \| history
samtools/bam_index.c.pysam.c		diff \| blob \| history
samtools/bam_maqcns.c.pysam.c		diff \| blob \| history
samtools/bam_md.c.pysam.c		diff \| blob \| history
samtools/bam_plcmd.c.pysam.c		diff \| blob \| history
samtools/bam_sort.c.pysam.c		diff \| blob \| history
samtools/bam_stat.c.pysam.c		diff \| blob \| history
samtools/bam_tview.c.pysam.c		diff \| blob \| history
samtools/bcftools/bcf.c.pysam.c		diff \| blob \| history
samtools/bcftools/bcf.h		diff \| blob \| history
samtools/bcftools/bcf2qcall.c.pysam.c		diff \| blob \| history
samtools/bcftools/bcfutils.c.pysam.c		diff \| blob \| history
samtools/bcftools/call1.c.pysam.c		diff \| blob \| history
samtools/bcftools/em.c.pysam.c	[new file with mode: 0644]	blob
samtools/bcftools/fet.c.pysam.c		diff \| blob \| history
samtools/bcftools/kmin.c.pysam.c	[new file with mode: 0644]	blob
samtools/bcftools/kmin.h	[new file with mode: 0644]	blob
samtools/bcftools/ld.c.pysam.c	[deleted file]	blob \| history
samtools/bcftools/prob1.c.pysam.c		diff \| blob \| history
samtools/bcftools/prob1.h		diff \| blob \| history
samtools/bcftools/vcf.c.pysam.c		diff \| blob \| history
samtools/bedidx.c.pysam.c	[new file with mode: 0644]	blob
samtools/bgzf.c.pysam.c		diff \| blob \| history
samtools/bgzf.h		diff \| blob \| history
samtools/cut_target.c.pysam.c	[new file with mode: 0644]	blob
samtools/errmod.h		diff \| blob \| history
samtools/faidx.c.pysam.c		diff \| blob \| history
samtools/khash.h		diff \| blob \| history
samtools/knetfile.c.pysam.c		diff \| blob \| history
samtools/kstring.c.pysam.c		diff \| blob \| history
samtools/kstring.h		diff \| blob \| history
samtools/misc/md5.c.pysam.c	[new file with mode: 0644]	blob
samtools/misc/md5.h	[new file with mode: 0644]	blob
samtools/msvc_compat.h	[new file with mode: 0644]	blob
samtools/phase.c.pysam.c	[new file with mode: 0644]	blob
samtools/sam.c.pysam.c		diff \| blob \| history
samtools/sam_header.c.pysam.c		diff \| blob \| history
samtools/sam_view.c.pysam.c		diff \| blob \| history
samtools/sample.c.pysam.c		diff \| blob \| history
setup.cfg		diff \| blob \| history
setup.py		diff \| blob \| history
tabix/bedidx.c.pysam.c	[new file with mode: 0644]	blob
tabix/bgzf.c.pysam.c		diff \| blob \| history
tabix/bgzf.h		diff \| blob \| history
tabix/index.c.pysam.c		diff \| blob \| history
tabix/kseq.h	[new file with mode: 0644]	blob
tabix/msvc_compat.h	[new file with mode: 0644]	blob
tabix/tabix.h		diff \| blob \| history
tests/example.gtf.gz		diff \| blob \| history
tests/example.gtf.gz.tbi		diff \| blob \| history
tests/pysam_test.py		diff \| blob \| history
tests/tabix_test.py		diff \| blob \| history

Unnamed repository; edit this file 'description' to name the repository.

RSS Atom