dgit.raspbian.org Git - python-pysam.git/commit

author	Afif Elghraoui <afif@ghraoui.name>
	Thu, 12 Nov 2015 02:45:10 +0000 (18:45 -0800)
committer	Afif Elghraoui <afif@ghraoui.name>
	Thu, 12 Nov 2015 02:45:10 +0000 (18:45 -0800)
commit	18e49038bca0bc7775fc8f6e3703b207815a4b91
tree	6ead0da6d22c7a67b0e1c2e33b75de6a8b5e7aaf	tree \| snapshot
parent	3cbc6e03eafa32ac25f5d6bedd8c7019568f7d7c	commit \| diff

Imported Upstream version 0.8.4+ds

52 files changed:

README.rst		diff \| blob \| history
benchmark/AlignedSegment_bench.py	[new file with mode: 0644]	blob
doc/api.rst		diff \| blob \| history
doc/conf.py		diff \| blob \| history
doc/faq.rst		diff \| blob \| history
doc/glossary.rst		diff \| blob \| history
doc/release.rst		diff \| blob \| history
doc/usage.rst		diff \| blob \| history
pysam/TabProxies.pxd	[deleted file]	blob \| history
pysam/TabProxies.pyx	[deleted file]	blob \| history
pysam/__init__.py		diff \| blob \| history
pysam/calignedsegment.pxd	[new file with mode: 0644]	blob
pysam/calignedsegment.pyx	[new file with mode: 0644]	blob
pysam/calignmentfile.pxd		diff \| blob \| history
pysam/calignmentfile.pyx		diff \| blob \| history
pysam/cbcf.pxd		diff \| blob \| history
pysam/cbcf.pyx		diff \| blob \| history
pysam/cfaidx.pxd		diff \| blob \| history
pysam/cfaidx.pyx		diff \| blob \| history
pysam/chtslib.pxd		diff \| blob \| history
pysam/chtslib.pyx		diff \| blob \| history
pysam/csamfile.pxd		diff \| blob \| history
pysam/csamfile.pyx		diff \| blob \| history
pysam/csamtools.pxd		diff \| blob \| history
pysam/csamtools.pyx		diff \| blob \| history
pysam/ctabix.pxd		diff \| blob \| history
pysam/ctabix.pyx		diff \| blob \| history
pysam/ctabixproxies.pxd	[new file with mode: 0644]	blob
pysam/ctabixproxies.pyx	[new file with mode: 0644]	blob
pysam/cutils.pxd	[new file with mode: 0644]	blob
pysam/cutils.pyx	[new file with mode: 0644]	blob
pysam/cvcf.pxd		diff \| blob \| history
pysam/cvcf.pyx		diff \| blob \| history
pysam/htslib_util.h		diff \| blob \| history
pysam/pysam_util.c		diff \| blob \| history
pysam/tabix_util.c		diff \| blob \| history
pysam/version.py		diff \| blob \| history
requirements.txt	[new file with mode: 0644]	blob
requires.txt	[deleted file]	blob \| history
save/pysam_test2.6.py		diff \| blob \| history
setup.py		diff \| blob \| history
tests/AlignedSegment_test.py		diff \| blob \| history
tests/AlignmentFile_test.py		diff \| blob \| history
tests/SamFile_test.py		diff \| blob \| history
tests/TestUtils.py		diff \| blob \| history
tests/faidx_test.py		diff \| blob \| history
tests/pysam_data/Makefile		diff \| blob \| history
tests/pysam_data/ex1.fq	[deleted file]	blob \| history
tests/pysam_data/faidx_ex1.fa	[new file with mode: 0644]	blob
tests/pysam_data/faidx_ex1.fq	[new file with mode: 0644]	blob
tests/samtools_test.py		diff \| blob \| history
tests/tabix_test.py		diff \| blob \| history

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