New upstream version 0.15.3+ds
authorMichael R. Crusoe <michael.crusoe@gmail.com>
Tue, 6 Aug 2019 17:37:29 +0000 (19:37 +0200)
committerMichael R. Crusoe <michael.crusoe@gmail.com>
Tue, 6 Aug 2019 17:37:29 +0000 (19:37 +0200)
commit169a628899d883a30944ece2535f066881671cf4
tree40a338092f4d31ab8e3d194ed93bb0d7cccc75ee
parent804729d07198184729ad0e30d76070d1ce9e8fce
New upstream version 0.15.3+ds
39 files changed:
.gitignore
.travis.yml
NEWS
README.rst
bcftools/bcftools.pysam.c
bcftools/bcftools.pysam.h
devtools/buildwheels.sh
devtools/import.py
devtools/run_tests_travis.sh
doc/api.rst
doc/glossary.rst
doc/release.rst
doc/usage.rst
import/pysam.c
import/pysam.h
pysam/htslib_util.h
pysam/libcalignedsegment.pxd
pysam/libcalignedsegment.pyx
pysam/libcalignmentfile.pyx
pysam/libcbcf.pyx
pysam/libcbcftools.pxd
pysam/libcfaidx.pyx
pysam/libchtslib.pxd
pysam/libcsamtools.pxd
pysam/libcutils.pyx
pysam/version.py
samtools/samtools.pysam.c
samtools/samtools.pysam.h
setup.py
tests/AlignmentFile_test.py
tests/TestUtils.py
tests/VariantFile_test.py
tests/VariantRecord_test.py [new file with mode: 0644]
tests/cbcf_data/example_vcf43.vcf [new file with mode: 0644]
tests/cbcf_data/example_vcf43_with_utf8.vcf [new file with mode: 0644]
tests/pysam_data/example_no_seq_in_header_null_bytes.bam [new file with mode: 0644]
tests/samtools_test.py
tests/tabix_test.py
tests/tabixproxies_test.py