fix test failure with htslib 1.20.
authorDebian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Wed, 29 May 2024 11:23:03 +0000 (13:23 +0200)
committerÉtienne Mollier <emollier@debian.org>
Wed, 29 May 2024 11:23:03 +0000 (13:23 +0200)
commit0d11b7ee9b0f2ddfe07fd8affe87d4caaa99bc8b
treebd21b05f6494d099368c756c414a5906fe6be425
parent3498e199d730b43a405ec7f1c76950ba91c37a0f
fix test failure with htslib 1.20.

This data file contains invalid data, which is diagnosed by
improvements in bam_parse_basemod2() in HTSlib 1.20. Updating these
base modification data files to the versions in htslib and hts-specs
corrects the problem.
Author: John Marshall
Origin: upstream, https://github.com/pysam-developers/pysam/issues/1291#issuecomment-2131146211
Bug: https://github.com/pysam-developers/pysam/issues/1291
Reviewed-by: Étienne Mollier <emollier@debian.org>
Last-Update: 2024-05-29

Gbp-Pq: Name htslib-1.20.patch
tests/pysam_data/MM-chebi.sam